Miyakogusa Predicted Gene

Lj1g3v0003100.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0003100.1 Non Chatacterized Hit- tr|F7HTZ3|F7HTZ3_CALJA
Uncharacterized protein OS=Callithrix jacchus
GN=LOC10,35.52,4e-19,UBC-like,Ubiquitin-conjugating enzyme/RWD-like;
no description,Ubiquitin-conjugating enzyme/RWD-like,CUFF.25108.1
         (180 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G51730.1 | Symbols:  | Ubiquitin-conjugating enzyme family pr...   205   1e-53

>AT1G51730.1 | Symbols:  | Ubiquitin-conjugating enzyme family
           protein | chr1:19186812-19188638 REVERSE LENGTH=252
          Length = 252

 Score =  205 bits (522), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 109/181 (60%), Positives = 131/181 (72%), Gaps = 1/181 (0%)

Query: 1   MTDYAQEQEMEIEALEAILMDEFKEIHSGESGLSTSNRCFQIKIA-QDEDGDMPISYPAQ 59
           MT+Y QEQEMEIEALEAILMDEFKEIHS ESGL+TSNRCFQI +  QD++ +     P Q
Sbjct: 1   MTEYKQEQEMEIEALEAILMDEFKEIHSSESGLNTSNRCFQITVTPQDDELEELAIPPVQ 60

Query: 60  LGLIFAHTERYPDEPPLLNVTSLQGIPPEDLRAVKEKLQQEASENLGMAMIYTLVTSAKE 119
           L L+F+HTE YPDE PLL+V S++GI   DL  +KEKL+QEASENLGMAMIYTLV+SAK+
Sbjct: 61  LALVFSHTENYPDEAPLLDVKSIRGIHVSDLTILKEKLEQEASENLGMAMIYTLVSSAKD 120

Query: 120 WLDERFCQDSGDVSAEAEEAAKEDIVVPHGEPVTVETFXXXXXXXXXXXXXXXXXXMPES 179
           WL E + QD     AE E A +++++VPHGEPVT+ETF                  MPES
Sbjct: 121 WLSEHYGQDDAAEFAEVEAAKEDEVIVPHGEPVTLETFLAWRERYEAELALERAKLMPES 180

Query: 180 A 180
           A
Sbjct: 181 A 181