Miyakogusa Predicted Gene

Lj1g3v0001050.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0001050.3 Non Chatacterized Hit- tr|A5C332|A5C332_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,60.56,2e-16,no
description,Tetratricopeptide-like helical; TPR-like,NULL;
TPR,Tetratricopeptide repeat; TPR_REGI,CUFF.25139.3
         (476 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G76630.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   523   e-148
AT1G76630.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   480   e-136

>AT1G76630.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:28759699-28765042 FORWARD
           LENGTH=1168
          Length = 1168

 Score =  523 bits (1346), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 269/475 (56%), Positives = 345/475 (72%), Gaps = 3/475 (0%)

Query: 2   VFALVESGNISLALGSFKKGVEQFQQALEISPDCVPAQYGHALGLLGLAKDCINLGAYQW 61
           +FALVES NI L LGS++KGVE F+QAL+ISP  +   YG A GLL  +K+CINLGA+ W
Sbjct: 189 IFALVESANIFLMLGSYRKGVELFEQALKISPQNISVLYGLASGLLSWSKECINLGAFGW 248

Query: 62  GASLLEEASEVSWGSAYSFRNISCIWKLHADIKLAYARCYPWIEDVQEMESDKEAFTASI 121
            ASLLE+A + +  S+    ++SCIWKLH DI+L YARC+PW    +  E   + F+ SI
Sbjct: 249 AASLLEDARKAAKASSELASSMSCIWKLHGDIQLTYARCFPWSGGTENSEFTLKTFSDSI 308

Query: 122 VAWRKTRFLAARHARFSYQRALHLSPWQANIYADIAITSNLMTSLNKNDNQELNDAWQLA 181
           ++WR   + AA  A+ SYQRALHL+PWQAN+Y DIAIT +L++SL+ + +   + +W+L 
Sbjct: 309 LSWRSICYSAALSAKASYQRALHLAPWQANVYTDIAITCDLVSSLSDDSDT--SSSWKLP 366

Query: 182 EKMTMGALLLEGANYEFWVALGCLSDHNALNQHALIRGLQLNGSLAIAWGYLGKLYYKAG 241
           EKM +GALLLE  N EFWVALGC+SD++AL  HALIR L L+ SLA+AW ++G+++ ++ 
Sbjct: 367 EKMVLGALLLECENSEFWVALGCMSDNSALKLHALIRALHLDVSLAVAWAFMGQIFRESD 426

Query: 242 EKQLARHVFDRARSIDPGLALPWASMSAESCVRELAPDEAFQSCSRAVQIMPLAEFQIGL 301
           E + A+  FD ARSIDP LALPWA  SA++  RE   DEAF+SC RA QI PLAEFQ+GL
Sbjct: 427 EMKFAKQAFDCARSIDPTLALPWAG-SADTYARESTSDEAFESCLRAAQISPLAEFQVGL 485

Query: 302 TKLALLSGHLSSSQVFGAIEQAMQHSPYYPESHNLHGLVCEARKDYKSAATLYRLARHAI 361
             LALL G++SS Q+F  IEQA+Q SPYYPE HNLHGLVCEAR +Y +A   YRLA  A+
Sbjct: 486 AWLALLQGNISSPQIFACIEQAVQRSPYYPEPHNLHGLVCEARHNYHTAIASYRLALAAM 545

Query: 362 SSGSWSIQNSHIRDISINLARSLSKAGNAADAVQECENLKKEGALDEEGLQVYAFSLWQL 421
           S    S   SH   +SINL RSLSKAG   ++V EC NLK +G LD  GLQ+YAFSLW+ 
Sbjct: 546 SIYPESSVKSHAGKVSINLVRSLSKAGRFKESVMECANLKSKGLLDAGGLQIYAFSLWRT 605

Query: 422 GENDLALSVVRNLVANLSSMEKTYVATSICFICRLVYFISGLDAVITGIVKMPKE 476
           G+ND ALSV+R+L   +S+ EKT +A  I FIC L+Y ISGLD+ IT I KMPK+
Sbjct: 606 GQNDSALSVIRDLAGRISTREKTSIAFPISFICSLLYCISGLDSAITSIQKMPKD 660


>AT1G76630.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:28759699-28765042 FORWARD
           LENGTH=1140
          Length = 1140

 Score =  480 bits (1236), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 253/468 (54%), Positives = 330/468 (70%), Gaps = 8/468 (1%)

Query: 2   VFALVESGNISLALGSFKKGVEQFQQALEISPDCVPAQYGHALGLLGLAKDCINLGAYQW 61
           +FALVES NI L LGS++KGVE F+QAL+ISP  +   YG A GLL  +K+CINLGA+ W
Sbjct: 189 IFALVESANIFLMLGSYRKGVELFEQALKISPQNISVLYGLASGLLSWSKECINLGAFGW 248

Query: 62  GASLLEEASEVSWGSAYSFRNISCIWKLHADIKLAYARCYPWIEDVQEMESDKEAFTASI 121
            ASLLE+A + +  S+    ++SCIWKLH DI+L YARC+PW    +  E   + F+ SI
Sbjct: 249 AASLLEDARKAAKASSELASSMSCIWKLHGDIQLTYARCFPWSGGTENSEFTLKTFSDSI 308

Query: 122 VAWRKTRFLAARHARFSYQRALHLSPWQANIYADIAITSNLMTSLNKNDNQELNDAWQLA 181
           ++WR   + AA  A+ SYQRALHL+PWQAN+Y DIAIT +L++SL+ + +     +W+L 
Sbjct: 309 LSWRSICYSAALSAKASYQRALHLAPWQANVYTDIAITCDLVSSLSDDSDTSS--SWKLP 366

Query: 182 EKMTMGALLLEGANYEFWVALGCLSDHNALNQHALIRGLQLNGSLAIAWGYLGKLYYKAG 241
           EKM +GALLLE  N EFWVALGC+SD++AL  HALIR L L+ SLA+AW ++G+++ ++ 
Sbjct: 367 EKMVLGALLLECENSEFWVALGCMSDNSALKLHALIRALHLDVSLAVAWAFMGQIFRESD 426

Query: 242 EKQLARHVFDRARSIDPGLALPWASMSAESCVRELAPDEAFQSCSRAVQIMPLAEFQIGL 301
           E + A+  FD ARSIDP LALPWA  SA++  RE   DEAF+SC RA QI PLAEFQ+GL
Sbjct: 427 EMKFAKQAFDCARSIDPTLALPWAG-SADTYARESTSDEAFESCLRAAQISPLAEFQVGL 485

Query: 302 TKLALLSGHLSSSQVFGAIEQAMQHSPYYPESHNLHGLVCEARKDYKSAATLYRLARHAI 361
             LALL G++SS Q+F  IEQA+Q SPYYPE HNLHGLVCEAR +Y +A   YRLA  A+
Sbjct: 486 AWLALLQGNISSPQIFACIEQAVQRSPYYPEPHNLHGLVCEARHNYHTAIASYRLALAAM 545

Query: 362 SSGSWSIQNSHIRDISINLARSLSKAGNAADAVQECENLKKEGALDEEGLQVYAFSLWQL 421
           S    S   SH   +SINL RSLSKAG   ++V EC NLK +G LD  GLQ+YAFSLW+ 
Sbjct: 546 SIYPESSVKSHAGKVSINLVRSLSKAGRFKESVMECANLKSKGLLDAGGLQIYAFSLWRT 605

Query: 422 GENDLALSVVRNL----VANLSSMEKTYVATS-ICFICRLVYFISGLD 464
           G+ND ALSV+R+L    + ++  M K +  +S I FI   ++ +   D
Sbjct: 606 GQNDSALSVIRDLADSAITSIQKMPKDFFQSSKISFIVSAIHSLDQSD 653