Miyakogusa Predicted Gene
- Lj0g3v0364339.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0364339.1 tr|D5VUA3|D5VUA3_METIM AAA family ATPase, CDC48
subfamily OS=Methanocaldococcus infernus (strain
DSM,27.48,1e-17,seg,NULL; NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE
(NUCLEAR VCP-LIKE PROTEIN),NULL; AAA-FAMILY ATPASE,gene.g28663.t1.1
(786 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G01610.1 | Symbols: CDC48C, emb1354 | cell division cycle 48C... 371 e-103
AT5G03340.1 | Symbols: | ATPase, AAA-type, CDC48 protein | chr5... 314 1e-85
AT3G53230.1 | Symbols: | ATPase, AAA-type, CDC48 protein | chr3... 312 5e-85
AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | cell division cy... 312 5e-85
AT2G03670.1 | Symbols: CDC48B | cell division cycle 48B | chr2:1... 215 1e-55
AT3G56690.1 | Symbols: CIP111 | Cam interacting protein 111 | ch... 156 6e-38
AT5G42270.1 | Symbols: VAR1, FTSH5 | FtsH extracellular protease... 152 1e-36
AT1G50250.1 | Symbols: FTSH1 | FTSH protease 1 | chr1:18614398-1... 150 2e-36
AT4G23940.1 | Symbols: | FtsH extracellular protease family | c... 150 5e-36
AT5G58870.1 | Symbols: ftsh9 | FTSH protease 9 | chr5:23770080-2... 148 2e-35
AT3G05530.1 | Symbols: RPT5A, ATS6A.2 | regulatory particle trip... 147 3e-35
AT3G47060.1 | Symbols: ftsh7 | FTSH protease 7 | chr3:17332999-1... 147 3e-35
AT1G09100.1 | Symbols: RPT5B | 26S proteasome AAA-ATPase subunit... 146 5e-35
AT5G15250.1 | Symbols: FTSH6, ATFTSH6 | FTSH protease 6 | chr5:4... 146 7e-35
AT1G03000.1 | Symbols: PEX6 | peroxin 6 | chr1:688057-692453 REV... 145 2e-34
AT1G06430.1 | Symbols: FTSH8 | FTSH protease 8 | chr1:1960214-19... 144 2e-34
AT5G43010.1 | Symbols: RPT4A | regulatory particle triple-A ATPa... 144 3e-34
AT2G30950.1 | Symbols: VAR2, FTSH2 | FtsH extracellular protease... 144 3e-34
AT5G08470.1 | Symbols: PEX1 | peroxisome 1 | chr5:2735925-274273... 143 5e-34
AT5G53170.1 | Symbols: FTSH11 | FTSH protease 11 | chr5:21563023... 143 5e-34
AT1G45000.1 | Symbols: | AAA-type ATPase family protein | chr1:... 142 1e-33
AT1G53750.1 | Symbols: RPT1A | regulatory particle triple-A 1A |... 140 2e-33
AT3G02450.1 | Symbols: | cell division protein ftsH, putative |... 139 6e-33
AT4G29040.1 | Symbols: RPT2a | regulatory particle AAA-ATPase 2A... 139 7e-33
AT2G20140.1 | Symbols: | AAA-type ATPase family protein | chr2:... 139 7e-33
AT2G26140.1 | Symbols: ftsh4 | FTSH protease 4 | chr2:11131939-1... 139 1e-32
AT5G64580.1 | Symbols: | AAA-type ATPase family protein | chr5:... 138 1e-32
AT5G19990.1 | Symbols: RPT6A, ATSUG1 | regulatory particle tripl... 137 3e-32
AT5G20000.1 | Symbols: | AAA-type ATPase family protein | chr5:... 137 3e-32
AT3G15120.1 | Symbols: | P-loop containing nucleoside triphosph... 135 1e-31
AT1G05910.1 | Symbols: | cell division cycle protein 48-related... 134 2e-31
AT5G15250.2 | Symbols: FTSH6 | FTSH protease 6 | chr5:4950411-49... 133 4e-31
AT5G58290.1 | Symbols: RPT3 | regulatory particle triple-A ATPas... 133 5e-31
AT1G53780.2 | Symbols: | peptidyl-prolyl cis-trans isomerases;h... 129 8e-30
AT1G80350.1 | Symbols: ERH3, AAA1, FRA2, LUE1, ATKTN1, KTN1, FRC... 129 8e-30
AT1G53780.1 | Symbols: | peptidyl-prolyl cis-trans isomerases;h... 129 8e-30
AT1G53780.3 | Symbols: | peptidyl-prolyl cis-trans isomerases;h... 129 9e-30
AT1G07510.1 | Symbols: ftsh10 | FTSH protease 10 | chr1:2305689-... 127 3e-29
AT3G16290.1 | Symbols: EMB2083 | AAA-type ATPase family protein ... 125 1e-28
AT4G27680.1 | Symbols: | P-loop containing nucleoside triphosph... 124 3e-28
AT1G02890.1 | Symbols: | AAA-type ATPase family protein | chr1:... 123 5e-28
AT2G29080.1 | Symbols: ftsh3 | FTSH protease 3 | chr2:12489911-1... 122 8e-28
AT5G53540.1 | Symbols: | P-loop containing nucleoside triphosph... 121 2e-27
AT4G02480.1 | Symbols: | AAA-type ATPase family protein | chr4:... 120 4e-27
AT4G28000.1 | Symbols: | P-loop containing nucleoside triphosph... 119 7e-27
AT1G64110.3 | Symbols: | P-loop containing nucleoside triphosph... 118 2e-26
AT1G64110.2 | Symbols: | P-loop containing nucleoside triphosph... 117 2e-26
AT1G64110.1 | Symbols: | P-loop containing nucleoside triphosph... 117 2e-26
AT1G50140.2 | Symbols: | P-loop containing nucleoside triphosph... 116 8e-26
AT1G50140.1 | Symbols: | P-loop containing nucleoside triphosph... 115 9e-26
AT5G52882.1 | Symbols: | P-loop containing nucleoside triphosph... 115 1e-25
AT3G19740.1 | Symbols: | P-loop containing nucleoside triphosph... 115 1e-25
AT2G27600.1 | Symbols: SKD1, VPS4, ATSKD1 | AAA-type ATPase fami... 114 3e-25
AT3G27120.1 | Symbols: | P-loop containing nucleoside triphosph... 112 1e-24
AT4G24860.1 | Symbols: | P-loop containing nucleoside triphosph... 112 1e-24
AT2G34560.2 | Symbols: | P-loop containing nucleoside triphosph... 108 1e-23
AT1G79560.1 | Symbols: EMB156, EMB36, EMB1047, FTSH12 | FTSH pro... 108 2e-23
AT2G34560.1 | Symbols: | P-loop containing nucleoside triphosph... 108 2e-23
AT2G45500.1 | Symbols: | AAA-type ATPase family protein | chr2:... 107 4e-23
AT2G45500.2 | Symbols: | AAA-type ATPase family protein | chr2:... 107 5e-23
AT4G04910.1 | Symbols: NSF | AAA-type ATPase family protein | ch... 106 6e-23
AT1G62130.1 | Symbols: | AAA-type ATPase family protein | chr1:... 103 4e-22
AT4G04180.1 | Symbols: | P-loop containing nucleoside triphosph... 90 8e-18
AT3G04340.1 | Symbols: emb2458 | FtsH extracellular protease fam... 87 5e-17
AT1G45000.2 | Symbols: | AAA-type ATPase family protein | chr1:... 86 1e-16
AT1G02890.2 | Symbols: | AAA-type ATPase family protein | chr1:... 84 4e-16
AT5G17730.1 | Symbols: | P-loop containing nucleoside triphosph... 65 1e-10
AT2G18193.1 | Symbols: | P-loop containing nucleoside triphosph... 59 1e-08
AT3G50940.1 | Symbols: | P-loop containing nucleoside triphosph... 56 9e-08
AT3G28600.1 | Symbols: | P-loop containing nucleoside triphosph... 55 2e-07
AT5G17740.1 | Symbols: | P-loop containing nucleoside triphosph... 55 2e-07
AT5G17760.1 | Symbols: | P-loop containing nucleoside triphosph... 52 1e-06
AT4G24710.1 | Symbols: | P-loop containing nucleoside triphosph... 51 3e-06
>AT3G01610.1 | Symbols: CDC48C, emb1354 | cell division cycle 48C |
chr3:231787-235057 FORWARD LENGTH=820
Length = 820
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 227/545 (41%), Positives = 305/545 (55%), Gaps = 81/545 (14%)
Query: 11 LRRRVEACKSTHATAAEIVKHLRFTYSADYHRTKRQTLTRLVHEALQSXXXXXXXXXXXX 70
L + ++ C +TA +IV LR Y ++ R RQ L V + L
Sbjct: 21 LSQVMDTCGKDLSTAEDIVDDLRSRY-GNFARLTRQVLLLNVRQVLNVRNNKRVKDEDED 79
Query: 71 XRKLVHDDDGVDECRKKRRKTDEGEVRLQIVEAS-------------------------- 104
+ D++G RKK+R+ DE E +LQ E S
Sbjct: 80 DN--IGDEEGSASQRKKQRRVDEKEEKLQRAEQSHLRKRNMERSVSSSPSSSSSSEDSGD 137
Query: 105 --------------VPR-----DSER-GLVRLKTNLRELYKGTVTKNVELE--------- 135
PR DS R +L ++ ++ KNVE+E
Sbjct: 138 VSTSEDAVYGEKLSPPRFDLINDSLRDNYAKLNSSSKKPIGSPAEKNVEVETVSNKGRSK 197
Query: 136 ---MGNSRKA------TSTVNEGEVEV---KGKRFRDFGGMKKVLERLKREVLLPLCHPK 183
MG ++A + G++EV KG F+DFGG+KK+L+ L+ VL P+ +P+
Sbjct: 198 LATMGARKEAKVSLSLSGATGNGDLEVEGTKGPTFKDFGGIKKILDELEMNVLFPILNPE 257
Query: 184 EWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANETRLPLYPISATALVSAGSGSSEANIR 243
++ +G KP SG+L HGPPGCGKT+LA+AIANE +P Y ISAT ++S SG+SE NIR
Sbjct: 258 PFKKIGVKPP-SGILFHGPPGCGKTKLANAIANEAGVPFYKISATEVISGVSGASEENIR 316
Query: 244 DLFSKAYKTAPSIIFIDEIDAIASKRENSQHGMENRMVSQLLTCMN------QXXXXXXX 297
+LFSKAY+TAPSI+FIDEIDAI SKREN Q ME R+V+QLLTCM+
Sbjct: 317 ELFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEKRIVTQLLTCMDGPGNKGDKNAPDSS 376
Query: 298 XXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESAREDILSVLTRGLLIEGPIDLK 357
IGATNRPDA+DPALRR GRF+ EI + PDE AR +ILSV+ + L +EGP D K
Sbjct: 377 AGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDKK 436
Query: 358 KLARSTPGFAGADLVCLVKIAGKLAMLRIVDERYVMR----EFLEDWLMESWSREERDKL 413
++AR TPGF GADL + +AG+ A+ RI+D R + E + WL W EE +KL
Sbjct: 437 RIARLTPGFVGADLESVAYLAGRKAIKRILDSRKSEQSGDGEDDKSWLRMPWPEEELEKL 496
Query: 414 ALKMSDFEEAIKVVQPSTRREGFSSIPNVKWEDVGGLDSLRDEFEDFIIGRIKDPELYEE 473
+KMSDFEEA+ +VQ S REGFS +P+VKW+DVGGLD LR +F +I+ IK P++Y+
Sbjct: 497 FVKMSDFEEAVNLVQASLTREGFSIVPDVKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKA 556
Query: 474 LGPQL 478
G L
Sbjct: 557 FGVDL 561
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/197 (45%), Positives = 113/197 (57%), Gaps = 33/197 (16%)
Query: 565 FMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDEL------------------- 605
FM ++G ELLNKYVGESELA+RTLF RARTCAPC++F DE+
Sbjct: 590 FMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEGAWVVERLL 649
Query: 606 ---LTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILKALA 662
L ELDG E R++VYVIG TNRP+ VD A L+PGR G LYVP P+ ++R ILKA+A
Sbjct: 650 NQFLVELDGGE-RRNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIA 708
Query: 663 RDTRLDAGVDLNVIGRMEACENMSGAELRALMGXXXXXXXXXXXXGTNTTR--------- 713
R +D VDL+ I + CE SGA+L L+ + ++
Sbjct: 709 RKKPIDPSVDLDGIAK-NNCEGFSGADLAHLVQKATFQAVEEMIGSSESSEDDVTDITQC 767
Query: 714 TIKTHHFDAAFSKISAS 730
TIKT HF+ A S +S S
Sbjct: 768 TIKTRHFEQALSLVSPS 784
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 146/293 (49%), Gaps = 17/293 (5%)
Query: 143 TSTVNEGEVEVKGKRFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGP 202
S EG V ++ D GG+ + + R ++ P+ P ++ G E +G LL+GP
Sbjct: 512 ASLTREGFSIVPDVKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLE-TGFLLYGP 570
Query: 203 PGCGKTELAHAIANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEI 262
PGCGKT +A A ANE I L++ G SE IR LF +A AP +IF DE+
Sbjct: 571 PGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEV 630
Query: 263 DAIASKRENSQHGMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGR 322
DA+ + R + R+++Q L ++ IGATNRPD VDPA RPGR
Sbjct: 631 DALTTSRGKEGAWVVERLLNQFLVELD-----GGERRNVYVIGATNRPDVVDPAFLRPGR 685
Query: 323 FDCEINIGIPDESAREDILSVLTRGLLIEGPIDLKKLARST-PGFAGADLVCLVKIAGKL 381
F + + +P+ R IL + R I+ +DL +A++ GF+GADL LV +
Sbjct: 686 FGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLV----QK 741
Query: 382 AMLRIVDERYVMREFLEDWLMESWSREERDKLALKMSDFEEAIKVVQPSTRRE 434
A + V+E E ED + + + +K FE+A+ +V PS ++
Sbjct: 742 ATFQAVEEMIGSSESSEDDVTDIT------QCTIKTRHFEQALSLVSPSVNKQ 788
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 34/161 (21%)
Query: 565 FMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE-------------------- 604
F + E+++ G SE +R LFS+A AP I+F+DE
Sbjct: 295 FYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEKRIV 354
Query: 605 --LLTELDGKEQRKD----------VYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPE 652
LLT +DG + D V VIG TNRP+A+D A+ + GR + + P +
Sbjct: 355 TQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDED 414
Query: 653 DRVKILKALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
R +IL +A+ RL+ D I R+ GA+L ++
Sbjct: 415 ARAEILSVVAQKLRLEGPFDKKRIARL--TPGFVGADLESV 453
>AT5G03340.1 | Symbols: | ATPase, AAA-type, CDC48 protein |
chr5:810091-813133 REVERSE LENGTH=810
Length = 810
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 193/558 (34%), Positives = 298/558 (53%), Gaps = 98/558 (17%)
Query: 158 FRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANE 217
+ D GG++K + +++ V LPL HP+ ++ +G KP G+LL+GPPG GKT +A A+ANE
Sbjct: 206 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPP-KGILLYGPPGSGKTLIARAVANE 264
Query: 218 TRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHGME 277
T + I+ ++S +G SE+N+R F +A K APSIIFIDEID+IA KRE + +E
Sbjct: 265 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVE 324
Query: 278 NRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESAR 337
R+VSQLLT M+ +GATNRP+++DPALRR GRFD EI+IG+PDE R
Sbjct: 325 RRIVSQLLTLMD----GLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 380
Query: 338 EDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLRIVDERYVMREFL 397
++L + T+ + + +DL+++++ T G+ GADL L A L+ + E+ + + L
Sbjct: 381 LEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAA----LQCIREKMDVID-L 435
Query: 398 EDWLMESWSREERDKLALKMSDFEEAIKVVQPSTRREGFSSIPNVKWEDVGGLDSLRDEF 457
ED +S E + +A+ F A+ PS RE +PNV WED+GGL++++ E
Sbjct: 436 ED---DSIDAEILNSMAVSNEHFHTALGNSNPSALRETVVEVPNVSWEDIGGLENVKREL 492
Query: 458 EDFIIGRIKDPELYEELGPQLSERCMEERNSMGPKQLDERPSVCRPLKLNPLEKVVHTGK 517
++ + ++ PE +E+ G ++P + V+ G
Sbjct: 493 QETVQYPVEHPEKFEKFG------------------------------MSPSKGVLFYGP 522
Query: 518 LGLGDYHLRLLMCTIFCMEVSTEVAFFECAHQGCCALGPIILRLDFCFMDLQGPELLNKY 577
G G T+ ++ E C A F+ ++GPELL +
Sbjct: 523 PGCGK--------TLLAKAIANE----------CQA----------NFISVKGPELLTMW 554
Query: 578 VGESELAVRTLFSRARTCAPCILFLDE-------------------------LLTELDGK 612
GESE VR +F +AR APC+LF DE LLTE+DG
Sbjct: 555 FGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGM 614
Query: 613 EQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILKALARDTRLDAGVD 672
+K V++IG TNRP+ +D A+L+PGRL + +Y+P P + R+ I KA R + + VD
Sbjct: 615 NAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVD 674
Query: 673 LNVIGRMEACENMSGAEL 690
+ + + + SGA++
Sbjct: 675 VTALAKY--TQGFSGADI 690
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 145/251 (57%), Gaps = 10/251 (3%)
Query: 136 MGNSRKATSTVNEGEVEVKGKRFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVS 195
+GNS S + E VEV + D GG++ V L+ V P+ HP+++ G P
Sbjct: 459 LGNSN--PSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS-K 515
Query: 196 GVLLHGPPGCGKTELAHAIANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPS 255
GVL +GPPGCGKT LA AIANE + + L++ G SEAN+R++F KA ++AP
Sbjct: 516 GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPC 575
Query: 256 IIFIDEIDAIASKRENS---QHGMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDA 312
++F DE+D+IA++R NS G +R+++QLLT M+ IGATNRPD
Sbjct: 576 VLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMD----GMNAKKTVFIIGATNRPDI 631
Query: 313 VDPALRRPGRFDCEINIGIPDESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLV 372
+D AL RPGR D I I +PDE +R +I R + +D+ LA+ T GF+GAD+
Sbjct: 632 IDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADIT 691
Query: 373 CLVKIAGKLAM 383
+ + A K A+
Sbjct: 692 EICQRACKYAI 702
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 24/151 (15%)
Query: 565 FMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE-------------------- 604
F + GPE+++K GESE +R F A AP I+F+DE
Sbjct: 269 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIV 328
Query: 605 --LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILKALA 662
LLT +DG + R V V+G TNRP ++D A+ + GR + + + P R+++L+
Sbjct: 329 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHT 388
Query: 663 RDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
++ +L VDL I + GA+L AL
Sbjct: 389 KNMKLAEDVDLERISK--DTHGYVGADLAAL 417
>AT3G53230.1 | Symbols: | ATPase, AAA-type, CDC48 protein |
chr3:19723416-19726489 FORWARD LENGTH=815
Length = 815
Score = 312 bits (800), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 193/558 (34%), Positives = 298/558 (53%), Gaps = 98/558 (17%)
Query: 158 FRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANE 217
+ D GG++K + +++ V LPL HP+ ++ +G KP G+LL+GPPG GKT +A A+ANE
Sbjct: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPP-KGILLYGPPGSGKTLIARAVANE 265
Query: 218 TRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHGME 277
T + I+ ++S +G SE+N+R F +A K APSIIFIDEID+IA KRE + +E
Sbjct: 266 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVE 325
Query: 278 NRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESAR 337
R+VSQLLT M+ +GATNRP+++DPALRR GRFD EI+IG+PDE R
Sbjct: 326 RRIVSQLLTLMD----GLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 381
Query: 338 EDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLRIVDERYVMREFL 397
++L + T+ + + +DL+++++ T G+ GADL L A L+ + E+ + + L
Sbjct: 382 LEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAA----LQCIREKMDVID-L 436
Query: 398 EDWLMESWSREERDKLALKMSDFEEAIKVVQPSTRREGFSSIPNVKWEDVGGLDSLRDEF 457
+D E E + +A+ F+ A+ PS RE +PNV WED+GGL++++ E
Sbjct: 437 DD---EEIDAEILNSMAVSNDHFQTALGNSNPSALRETVVEVPNVSWEDIGGLENVKREL 493
Query: 458 EDFIIGRIKDPELYEELGPQLSERCMEERNSMGPKQLDERPSVCRPLKLNPLEKVVHTGK 517
++ + ++ PE +E+ G ++P + V+ G
Sbjct: 494 QETVQYPVEHPEKFEKFG------------------------------MSPSKGVLFYGP 523
Query: 518 LGLGDYHLRLLMCTIFCMEVSTEVAFFECAHQGCCALGPIILRLDFCFMDLQGPELLNKY 577
G G T+ ++ E C A F+ ++GPELL +
Sbjct: 524 PGCGK--------TLLAKAIANE----------CQA----------NFISIKGPELLTMW 555
Query: 578 VGESELAVRTLFSRARTCAPCILFLDE-------------------------LLTELDGK 612
GESE VR +F +AR APC+LF DE LLTE+DG
Sbjct: 556 FGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGM 615
Query: 613 EQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILKALARDTRLDAGVD 672
+K V++IG TNRP+ +D A+L+PGRL + +Y+P P E R +I K+ R + + VD
Sbjct: 616 NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVD 675
Query: 673 LNVIGRMEACENMSGAEL 690
L + + + SGA++
Sbjct: 676 LRALAKY--TQGFSGADI 691
Score = 179 bits (455), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 146/251 (58%), Gaps = 10/251 (3%)
Query: 136 MGNSRKATSTVNEGEVEVKGKRFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVS 195
+GNS S + E VEV + D GG++ V L+ V P+ HP+++ G P
Sbjct: 460 LGNSN--PSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS-K 516
Query: 196 GVLLHGPPGCGKTELAHAIANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPS 255
GVL +GPPGCGKT LA AIANE + I L++ G SEAN+R++F KA ++AP
Sbjct: 517 GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPC 576
Query: 256 IIFIDEIDAIASKRENS---QHGMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDA 312
++F DE+D+IA++R NS G +R+++QLLT M+ IGATNRPD
Sbjct: 577 VLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMD----GMNAKKTVFIIGATNRPDI 632
Query: 313 VDPALRRPGRFDCEINIGIPDESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLV 372
+DPAL RPGR D I I +PDE +R I R + +DL+ LA+ T GF+GAD+
Sbjct: 633 IDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADIT 692
Query: 373 CLVKIAGKLAM 383
+ + + K A+
Sbjct: 693 EICQRSCKYAI 703
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 24/151 (15%)
Query: 565 FMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE-------------------- 604
F + GPE+++K GESE +R F A AP I+F+DE
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 329
Query: 605 --LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILKALA 662
LLT +DG + R V V+G TNRP ++D A+ + GR + + + P R+++L+
Sbjct: 330 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHT 389
Query: 663 RDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
++ +L VDL + + GA+L AL
Sbjct: 390 KNMKLAEDVDLERVSK--DTHGYVGADLAAL 418
>AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | cell division cycle
48 | chr3:3019494-3022832 FORWARD LENGTH=809
Length = 809
Score = 312 bits (800), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 192/559 (34%), Positives = 297/559 (53%), Gaps = 99/559 (17%)
Query: 158 FRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANE 217
+ D GG++K + +++ V LPL HP+ ++ +G KP G+LL+GPPG GKT +A A+ANE
Sbjct: 206 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPP-KGILLYGPPGSGKTLIARAVANE 264
Query: 218 TRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHGME 277
T + I+ ++S +G SE+N+R F +A K APSIIFIDEID+IA KRE + +E
Sbjct: 265 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVE 324
Query: 278 NRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESAR 337
R+VSQLLT M+ +GATNRP+++DPALRR GRFD EI+IG+PDE R
Sbjct: 325 RRIVSQLLTLMD----GLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 380
Query: 338 EDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLRIVDERYVMREFL 397
++L + T+ + + +DL+++++ T G+ GADL L A L+ + E+ + + L
Sbjct: 381 LEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAA----LQCIREKMDVID-L 435
Query: 398 EDWLMESWSREERDKLALKMSDFEEAIKVVQPSTRREGFSSIPNVKWEDVGGLDSLRDEF 457
ED +S E + +A+ F A+ PS RE +PNV W D+GGL++++ E
Sbjct: 436 ED---DSIDAEILNSMAVTNEHFHTALGNSNPSALRETVVEVPNVSWNDIGGLENVKREL 492
Query: 458 EDFIIGRIKDPELYEELGPQLSERCMEERNSMGPKQLDERPSVCRPLKLNPLEKVVHTGK 517
++ + ++ PE +E+ G ++P + V+ G
Sbjct: 493 QETVQYPVEHPEKFEKFG------------------------------MSPSKGVLFYGP 522
Query: 518 LGLGDYHLRLLMCTIFCMEVSTEVAFFECAHQGCCALGPIILRLDFCFMDLQGPELLNKY 577
G G T+ ++ E C A F+ ++GPELL +
Sbjct: 523 PGCGK--------TLLAKAIANE----------CQA----------NFISVKGPELLTMW 554
Query: 578 VGESELAVRTLFSRARTCAPCILFLDE--------------------------LLTELDG 611
GESE VR +F +AR APC+LF DE LLTE+DG
Sbjct: 555 FGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDG 614
Query: 612 KEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILKALARDTRLDAGV 671
+K V++IG TNRP+ +D A+L+PGRL + +Y+P P + R+ I KA R + + V
Sbjct: 615 MNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDV 674
Query: 672 DLNVIGRMEACENMSGAEL 690
D+ + + + SGA++
Sbjct: 675 DIGALAKY--TQGFSGADI 691
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/301 (36%), Positives = 167/301 (55%), Gaps = 13/301 (4%)
Query: 136 MGNSRKATSTVNEGEVEVKGKRFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVS 195
+GNS S + E VEV + D GG++ V L+ V P+ HP+++ G P
Sbjct: 459 LGNSN--PSALRETVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS-K 515
Query: 196 GVLLHGPPGCGKTELAHAIANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPS 255
GVL +GPPGCGKT LA AIANE + + L++ G SEAN+R++F KA ++AP
Sbjct: 516 GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPC 575
Query: 256 IIFIDEIDAIASKR----ENSQHGMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPD 311
++F DE+D+IA++R G +R+++QLLT M+ IGATNRPD
Sbjct: 576 VLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMD----GMNAKKTVFIIGATNRPD 631
Query: 312 AVDPALRRPGRFDCEINIGIPDESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADL 371
+D AL RPGR D I I +PDE +R +I R I +D+ LA+ T GF+GAD+
Sbjct: 632 IIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADI 691
Query: 372 VCLVKIAGKLAMLRIVDERYVMREFLEDWLMESWSREERDKLA-LKMSDFEEAIKVVQPS 430
+ + A K A+ + E+ + +E E+ + D+++ +K + FEE++K + S
Sbjct: 692 TEICQRACKYAIRENI-EKDIEKEKRRSENPEAMEEDGVDEVSEIKAAHFEESMKYARRS 750
Query: 431 T 431
Sbjct: 751 V 751
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 24/151 (15%)
Query: 565 FMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE-------------------- 604
F + GPE+++K GESE +R F A AP I+F+DE
Sbjct: 269 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIV 328
Query: 605 --LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILKALA 662
LLT +DG + R V V+G TNRP ++D A+ + GR + + + P R+++L+
Sbjct: 329 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHT 388
Query: 663 RDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
++ +L VDL I + GA+L AL
Sbjct: 389 KNMKLAEDVDLERISK--DTHGYVGADLAAL 417
>AT2G03670.1 | Symbols: CDC48B | cell division cycle 48B |
chr2:1117595-1120361 FORWARD LENGTH=603
Length = 603
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 171/565 (30%), Positives = 250/565 (44%), Gaps = 118/565 (20%)
Query: 160 DFGGMKKVLERLKREVLLPLCHPKEWRMLGHK-PEVSGVLLHGPPGCGKTELAHAIANET 218
+ GG ++ L+ L+ ++ P +P E R LG K P G+LL+GPPG GKT L A+ E
Sbjct: 23 EIGGNERALQALRELIIFPFRYPLEARTLGLKWPR--GLLLYGPPGTGKTSLVRAVVQEC 80
Query: 219 RLPLYPISATALVSAGSGSSEANIRDLFSKAYKTA----PSIIFIDEIDAIASKRENSQH 274
L +S ++ A +G SE +R+ F++A A PS+IFIDEID + +R +++
Sbjct: 81 DAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRR-DARR 139
Query: 275 GMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDE 334
+ R+ SQL T M+ + +TNR DA+DPALRR GRFD + + P+E
Sbjct: 140 EQDVRIASQLFTLMDSNKPSSSAPRVVV-VASTNRVDAIDPALRRAGRFDALVEVSTPNE 198
Query: 335 SAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLRIVDERYVMR 394
R IL + T+ + ++ +DL+ +A S G+ GADL L + A
Sbjct: 199 EDRLKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREA---------------- 242
Query: 395 EFLEDWLMESWSREERDKLALKMSDFEEAIKVVQPSTRREGFSSIPNVKWEDVGGLDSLR 454
S S+ D L L DF+ A VV PS R IP V W+DVGGL L+
Sbjct: 243 -------TISASKRSSDSLILTSQDFKIAKSVVGPSINRGITVEIPKVTWDDVGGLKDLK 295
Query: 455 DEFEDFIIGRIKDPELYEELGPQLSERCMEERNSMGPKQLDERPSVCRPLKLNPLEKVVH 514
+ + + IK + ++G ++P+ ++
Sbjct: 296 KKLQQAVEWPIKHSAAFVKMG------------------------------ISPMRGILL 325
Query: 515 TGKLGLGDYHLRLLMCTIFCMEVSTEVAFFECAHQGCCALGPIILRLDFCFMDLQGPELL 574
G G L + + +FF + C L F +G LL
Sbjct: 326 HGPPGCSKTTLAKA------AANAAQASFFSLS---CAEL--------FSMYVGEGEALL 368
Query: 575 NKYVGESELAVRTLFSRARTCAPCILFLDE--------------------------LLTE 608
R F RAR +P I+F DE LLTE
Sbjct: 369 -----------RNTFQRARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTE 417
Query: 609 LDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILKALARDTRLD 668
+DG E+ K + V+ TNRP A+D A+++PGR LYVP P E R +IL+ R+ L
Sbjct: 418 MDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLG 477
Query: 669 AGVDLNVIGRMEACENMSGAELRAL 693
VDL I E + +GAEL L
Sbjct: 478 DDVDLRKIA--EETDLFTGAELEGL 500
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 132/240 (55%), Gaps = 2/240 (0%)
Query: 145 TVNEG-EVEVKGKRFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPP 203
++N G VE+ + D GG+K + ++L++ V P+ H + +G P + G+LLHGPP
Sbjct: 271 SINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISP-MRGILLHGPP 329
Query: 204 GCGKTELAHAIANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEID 263
GC KT LA A AN + + +S L S G EA +R+ F +A +PSIIF DE D
Sbjct: 330 GCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEAD 389
Query: 264 AIASKRENSQHGMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRF 323
+A KR + + + +LL+ + + ATNRP A+D AL RPGRF
Sbjct: 390 VVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRF 449
Query: 324 DCEINIGIPDESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAM 383
D + + PD AR +IL V TR + + +DL+K+A T F GA+L L + +G +++
Sbjct: 450 DLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRESGTVSL 509
>AT3G56690.1 | Symbols: CIP111 | Cam interacting protein 111 |
chr3:20993869-20998531 REVERSE LENGTH=1022
Length = 1022
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 96/253 (37%), Positives = 138/253 (54%), Gaps = 7/253 (2%)
Query: 133 ELEMGNSRKATSTVNEGEVEVKGKRFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKP 192
+ E ++ S + E +EV + D GG +V +L V P H ++ +G +P
Sbjct: 698 DFENAKTKIRPSAMREVILEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRP 757
Query: 193 EVSGVLLHGPPGCGKTELAHAIANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKT 252
SG+L+ GPPGC KT +A A+A+E +L + L S G SE +R LF+KA
Sbjct: 758 P-SGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 816
Query: 253 APSIIFIDEIDAIASKR--ENSQHGMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRP 310
APSIIF DEID++AS R EN + +R++SQLL ++ I ATNRP
Sbjct: 817 APSIIFFDEIDSLASIRGKENDGVSVSDRVMSQLLVELD----GLHQRVGVTVIAATNRP 872
Query: 311 DAVDPALRRPGRFDCEINIGIPDESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGAD 370
D +D AL RPGRFD + +G P+E+ RE IL + R + I LK+LA T G+ GAD
Sbjct: 873 DKIDSALLRPGRFDRLLYVGPPNETDREAILKIHLRKIPCSSDICLKELASITKGYTGAD 932
Query: 371 LVCLVKIAGKLAM 383
+ + + A A+
Sbjct: 933 ISLICREAAIAAL 945
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 128/241 (53%), Gaps = 7/241 (2%)
Query: 150 EVEVKGKRFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTE 209
E E G GG+ K L R+++ LG +P GVL+HGPPG GKT
Sbjct: 376 EGENVGCEISKLGGLSKEYAIL-RDIIDSSSIKNSLSSLGLRP-TKGVLIHGPPGTGKTS 433
Query: 210 LAHAIANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKR 269
LA A + + + ++ ++S G SE + ++F A P+++FID++DAIA R
Sbjct: 434 LARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIAPAR 493
Query: 270 ENSQHGMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINI 329
+ + RMV+ LL M+ I ATNRPD+++PALRRPGR D EI I
Sbjct: 494 KEGGEELSQRMVATLLNLMD----GISRTDGVVVIAATNRPDSIEPALRRPGRLDREIEI 549
Query: 330 GIPDESAREDILSVLTRGLLIE-GPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLRIVD 388
G+P + R DIL ++ RG+ I +++LA +T GF GADL L A + + R +D
Sbjct: 550 GVPSSTQRSDILHIILRGMRHSLSNIQVEQLAMATHGFVGADLSALCCEAAFVCLRRHLD 609
Query: 389 E 389
+
Sbjct: 610 Q 610
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 131/308 (42%), Gaps = 97/308 (31%)
Query: 413 LALKMSDFEEAIKVVQPSTRREGFSSIPNVKWEDVGGLDSLRDEFEDFIIGRIKDPELYE 472
L++ DFE A ++PS RE +P V WEDVGG ++E ++ ++ ++ P+ ++
Sbjct: 692 LSVGFEDFENAKTKIRPSAMREVILEVPKVNWEDVGG----QNEVKNQLMEAVEWPQKHQ 747
Query: 473 ELGPQLSERCMEERNSMGPKQLDERPSVCRPLKLNPLEKVVHTGKLGLGDYHLRLLMCTI 532
+ ++ R P ++ G G T+
Sbjct: 748 DAFKRIGTR--------------------------PPSGILMFGPPGCSK--------TL 773
Query: 533 FCMEVSTEVAFFECAHQGCCALGPIILRLDFCFMDLQGPELLNKYVGESELAVRTLFSRA 592
V++E F+ ++GPEL +K+VGESE AVR+LF++A
Sbjct: 774 MARAVASEA--------------------KLNFLAVKGPELFSKWVGESEKAVRSLFAKA 813
Query: 593 RTCAPCILFLDE------------------------LLTELDGKEQRKDVYVIGTTNRPE 628
R AP I+F DE LL ELDG QR V VI TNRP+
Sbjct: 814 RANAPSIIFFDEIDSLASIRGKENDGVSVSDRVMSQLLVELDGLHQRVGVTVIAATNRPD 873
Query: 629 AVDRAILQPGRLGKHLYVPHPSPEDRVKI---------------LKALARDTRLDAGVDL 673
+D A+L+PGR + LYV P+ DR I LK LA T+ G D+
Sbjct: 874 KIDSALLRPGRFDRLLYVGPPNETDREAILKIHLRKIPCSSDICLKELASITKGYTGADI 933
Query: 674 NVIGRMEA 681
++I R A
Sbjct: 934 SLICREAA 941
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 23/151 (15%)
Query: 565 FMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDEL------------------- 605
F + GPE++++Y+GESE A+ +F A P ++F+D+L
Sbjct: 446 FFSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIAPARKEGGEELSQRMV 505
Query: 606 ---LTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILKALA 662
L +DG + V VI TNRP++++ A+ +PGRL + + + PS R IL +
Sbjct: 506 ATLLNLMDGISRTDGVVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHIIL 565
Query: 663 RDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
R R ++ V A GA+L AL
Sbjct: 566 RGMRHSLS-NIQVEQLAMATHGFVGADLSAL 595
>AT5G42270.1 | Symbols: VAR1, FTSH5 | FtsH extracellular protease
family | chr5:16902659-16905102 FORWARD LENGTH=704
Length = 704
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/244 (40%), Positives = 133/244 (54%), Gaps = 11/244 (4%)
Query: 150 EVEVKGKRFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHK-PEVSGVLLHGPPGCGKT 208
EV G F D G + L+ EV+ L +P ++ LG K P+ G LL GPPG GKT
Sbjct: 241 EVPETGVTFGDVAGADQAKLELQ-EVVDFLKNPDKYTALGAKIPK--GCLLVGPPGTGKT 297
Query: 209 ELAHAIANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASK 268
LA A+A E +P + +A+ V G + +RDLF KA AP I+FIDEIDA+ +
Sbjct: 298 LLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQ 357
Query: 269 RENSQHGMEN---RMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDC 325
R G + + ++QLLT M+ + ATNRPD +D AL RPGRFD
Sbjct: 358 RGAGMGGGNDEREQTINQLLTEMD----GFSGNSGVIVLAATNRPDVLDSALLRPGRFDR 413
Query: 326 EINIGIPDESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLR 385
++ + PD + R IL V +RG I +D +K+AR TPGF GADL L+ A LA R
Sbjct: 414 QVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARR 473
Query: 386 IVDE 389
+ E
Sbjct: 474 ELKE 477
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 115/288 (39%), Gaps = 92/288 (31%)
Query: 436 FSSIP--NVKWEDVGGLDSLRDEFEDFIIGRIKDPELYEELGPQLSERCMEERNSMGPKQ 493
F +P V + DV G D + E ++ ++ +K+P+ Y LG ++ + C+ +GP
Sbjct: 239 FQEVPETGVTFGDVAGADQAKLELQE-VVDFLKNPDKYTALGAKIPKGCL----LVGPP- 292
Query: 494 LDERPSVCRPLKLNPLEKVVHTGKLGLGDYHLRLLMCTIFCMEVSTE--VAFFECAHQGC 551
TGK T+ V+ E V FF CA
Sbjct: 293 --------------------GTGK-------------TLLARAVAGEAGVPFFSCAAS-- 317
Query: 552 CALGPIILRLDFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE------- 604
E + +VG VR LF +A++ APCI+F+DE
Sbjct: 318 --------------------EFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQ 357
Query: 605 ------------------LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYV 646
LLTE+DG V V+ TNRP+ +D A+L+PGR + + V
Sbjct: 358 RGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV 417
Query: 647 PHPSPEDRVKILKALARDTRLDAGVDLNVIGRMEACENMSGAELRALM 694
P RV+ILK +R + VD + R +GA+L+ LM
Sbjct: 418 DRPDVAGRVQILKVHSRGKAIGKDVDYEKVARR--TPGFTGADLQNLM 463
>AT1G50250.1 | Symbols: FTSH1 | FTSH protease 1 |
chr1:18614398-18616930 REVERSE LENGTH=716
Length = 716
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 132/244 (54%), Gaps = 11/244 (4%)
Query: 150 EVEVKGKRFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHK-PEVSGVLLHGPPGCGKT 208
EV G F D G + L+ EV+ L +P ++ LG K P+ G LL GPPG GKT
Sbjct: 253 EVPETGVSFADVAGADQAKLELQ-EVVDFLKNPDKYTALGAKIPK--GCLLVGPPGTGKT 309
Query: 209 ELAHAIANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASK 268
LA A+A E +P + +A+ V G + +RDLF KA AP I+FIDEIDA+ +
Sbjct: 310 LLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQ 369
Query: 269 RENSQHGMEN---RMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDC 325
R G + + ++QLLT M+ + ATNRPD +D AL RPGRFD
Sbjct: 370 RGAGMGGGNDEREQTINQLLTEMD----GFSGNSGVIVLAATNRPDVLDSALLRPGRFDR 425
Query: 326 EINIGIPDESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLR 385
++ + PD + R IL V +RG + +D K+AR TPGF GADL L+ A LA R
Sbjct: 426 QVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR 485
Query: 386 IVDE 389
+ E
Sbjct: 486 ELKE 489
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 116/288 (40%), Gaps = 92/288 (31%)
Query: 436 FSSIP--NVKWEDVGGLDSLRDEFEDFIIGRIKDPELYEELGPQLSERCMEERNSMGPKQ 493
F +P V + DV G D + E ++ ++ +K+P+ Y LG ++ + C+ +GP
Sbjct: 251 FQEVPETGVSFADVAGADQAKLELQE-VVDFLKNPDKYTALGAKIPKGCL----LVGPP- 304
Query: 494 LDERPSVCRPLKLNPLEKVVHTGKLGLGDYHLRLLMCTIFCMEVSTE--VAFFECAHQGC 551
TGK T+ V+ E V FF CA
Sbjct: 305 --------------------GTGK-------------TLLARAVAGEAGVPFFSCAAS-- 329
Query: 552 CALGPIILRLDFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE------- 604
E + +VG VR LF +A++ APCI+F+DE
Sbjct: 330 --------------------EFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQ 369
Query: 605 ------------------LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYV 646
LLTE+DG V V+ TNRP+ +D A+L+PGR + + V
Sbjct: 370 RGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV 429
Query: 647 PHPSPEDRVKILKALARDTRLDAGVDLNVIGRMEACENMSGAELRALM 694
P RVKIL+ +R L VD + + R +GA+L+ LM
Sbjct: 430 DRPDVAGRVKILQVHSRGKALGKDVDFDKVARR--TPGFTGADLQNLM 475
>AT4G23940.1 | Symbols: | FtsH extracellular protease family |
chr4:12437108-12441841 FORWARD LENGTH=946
Length = 946
Score = 150 bits (378), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 131/237 (55%), Gaps = 11/237 (4%)
Query: 155 GKRFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAI 214
G +F D G+ + ++ L+ E++ L +P + +G KP GVLL GPPGCGKT +A AI
Sbjct: 426 GVKFADVAGIDEAVDELQ-ELVKYLKNPDLFDKMGIKPP-HGVLLEGPPGCGKTLVAKAI 483
Query: 215 ANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKR----- 269
A E +P Y ++ + V G A IRDLF +A PS+IFIDEIDA+A++R
Sbjct: 484 AGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFK 543
Query: 270 ENSQHGMENRMVSQLLTCMNQXXXXXXXXXXXXXI---GATNRPDAVDPALRRPGRFDCE 326
ENS + N + T +NQ + GATNR D +DPAL RPGRFD +
Sbjct: 544 ENSDQ-LYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRDLLDPALLRPGRFDRK 602
Query: 327 INIGIPDESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAM 383
I + P+ R DIL + + + +DL A + PG++GA L LV+ A +A+
Sbjct: 603 IRVRPPNAKGRLDILKIHASKVKMSDSVDLSSYASNLPGWSGAKLAQLVQEAALVAV 659
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 109/286 (38%), Gaps = 94/286 (32%)
Query: 442 VKWEDVGGLDSLRDEFEDFIIGRIKDPELYEELGPQLSERCMEERNSMGPKQLDERPSVC 501
VK+ DV G+D DE ++ ++ +K+P+L++++G
Sbjct: 427 VKFADVAGIDEAVDELQE-LVKYLKNPDLFDKMG-------------------------- 459
Query: 502 RPLKLNPLEKVVHTGKLGLGDYHLRLLMCTIFCMEVSTEVAFFECAHQGCCALGPIILRL 561
+ P V+ G G G + L+ E V F++ A
Sbjct: 460 ----IKPPHGVLLEGPPGCG----KTLVAKAIAGEAG--VPFYQMA-------------- 495
Query: 562 DFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE----------------- 604
G E + VG +R LF RA+ P ++F+DE
Sbjct: 496 --------GSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKENSD 547
Query: 605 ----------------LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPH 648
LL ELDG + K V +G TNR + +D A+L+PGR + + V
Sbjct: 548 QLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRDLLDPALLRPGRFDRKIRVRP 607
Query: 649 PSPEDRVKILKALARDTRLDAGVDLNVIGRMEACENMSGAELRALM 694
P+ + R+ ILK A ++ VDL+ SGA+L L+
Sbjct: 608 PNAKGRLDILKIHASKVKMSDSVDLSSYA--SNLPGWSGAKLAQLV 651
>AT5G58870.1 | Symbols: ftsh9 | FTSH protease 9 |
chr5:23770080-23773719 REVERSE LENGTH=806
Length = 806
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 129/231 (55%), Gaps = 12/231 (5%)
Query: 158 FRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANE 217
F D G+ + E L+ E++ L +P + LG +P GVLL G PG GKT LA A+A E
Sbjct: 328 FADVAGVDEAKEELE-EIVEFLKNPDRYVRLGARPP-RGVLLVGLPGTGKTLLAKAVAGE 385
Query: 218 TRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHGME 277
+ +P SA+ V G + +RDLF++A K APSIIFIDEIDA+A R+ +
Sbjct: 386 SDVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMVS 445
Query: 278 N----RMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPD 333
N + ++QLLT M+ +GATNR D +DPALRRPGRFD + + PD
Sbjct: 446 NDEREQTLNQLLTEMD----GFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPD 501
Query: 334 ESAREDILSVLT--RGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLA 382
+ RE IL V + L + ++L +A T GF GADL LV A LA
Sbjct: 502 KVGRESILKVHVSKKELPLGDDVNLASIASMTTGFTGADLANLVNEAALLA 552
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 69/159 (43%), Gaps = 26/159 (16%)
Query: 562 DFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE----------------- 604
D F+ E + YVG VR LF+RA+ AP I+F+DE
Sbjct: 387 DVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMVSN 446
Query: 605 ---------LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRV 655
LLTE+DG + V V+G TNR + +D A+ +PGR + + V P R
Sbjct: 447 DEREQTLNQLLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRE 506
Query: 656 KILKALARDTRLDAGVDLNVIGRMEACENMSGAELRALM 694
ILK L G D+N+ +GA+L L+
Sbjct: 507 SILKVHVSKKELPLGDDVNLASIASMTTGFTGADLANLV 545
>AT3G05530.1 | Symbols: RPT5A, ATS6A.2 | regulatory particle
triple-A ATPase 5A | chr3:1603540-1605993 FORWARD
LENGTH=424
Length = 424
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 124/228 (54%), Gaps = 2/228 (0%)
Query: 158 FRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANE 217
+ D GG++K ++ L ++LP+ H + + LG +P GVLL+GPPG GKT +A A A +
Sbjct: 170 YNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPP-KGVLLYGPPGTGKTLMARACAAQ 228
Query: 218 TRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHGME 277
T ++ LV G +RD F A + AP IIFIDEIDAI +KR +S+ +
Sbjct: 229 TNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGD 288
Query: 278 NRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESAR 337
+ +L +NQ I ATNR D +DPAL R GR D +I P E AR
Sbjct: 289 REVQRTMLELLNQ-LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 347
Query: 338 EDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLR 385
IL + +R + + ++ ++LARST F GA L + AG LA+ R
Sbjct: 348 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 395
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 27/155 (17%)
Query: 564 CFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE------------------- 604
F+ L GP+L+ ++G+ VR F A+ APCI+F+DE
Sbjct: 232 TFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREV 291
Query: 605 ------LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKIL 658
LL +LDG + + VI TNR + +D A+++ GRL + + PHP+ E R +IL
Sbjct: 292 QRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIL 351
Query: 659 KALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
+ +R + V+ + R + ++ +GA+L+A+
Sbjct: 352 QIHSRKMNVHPDVNFEELAR--STDDFNGAQLKAV 384
>AT3G47060.1 | Symbols: ftsh7 | FTSH protease 7 |
chr3:17332999-17336613 FORWARD LENGTH=802
Length = 802
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 129/231 (55%), Gaps = 12/231 (5%)
Query: 158 FRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANE 217
F D G+ + E L+ E++ L +P+++ LG +P GVLL G PG GKT LA A+A E
Sbjct: 324 FADVAGVDEAKEELE-EIVEFLRNPEKYVRLGARPP-RGVLLVGLPGTGKTLLAKAVAGE 381
Query: 218 TRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHGME 277
+P SA+ V G + +RDLF++A K APSIIFIDEIDA+A R+
Sbjct: 382 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMGS 441
Query: 278 N----RMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPD 333
N + ++QLLT M+ +GATNR D +DPALRRPGRFD + + PD
Sbjct: 442 NDEREQTLNQLLTEMD----GFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPD 497
Query: 334 ESAREDILSVLT--RGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLA 382
+ RE IL V + L + ++L +A T GF GADL LV A LA
Sbjct: 498 KIGRESILRVHVSKKELPLGDDVNLGSIASMTTGFTGADLANLVNEAALLA 548
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 68/156 (43%), Gaps = 26/156 (16%)
Query: 565 FMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE-------------------- 604
F+ E + YVG VR LF+RA+ AP I+F+DE
Sbjct: 386 FISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMGSNDER 445
Query: 605 ------LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKIL 658
LLTE+DG + V V+G TNR + +D A+ +PGR + + V P R IL
Sbjct: 446 EQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGRESIL 505
Query: 659 KALARDTRLDAGVDLNVIGRMEACENMSGAELRALM 694
+ L G D+N+ +GA+L L+
Sbjct: 506 RVHVSKKELPLGDDVNLGSIASMTTGFTGADLANLV 541
>AT1G09100.1 | Symbols: RPT5B | 26S proteasome AAA-ATPase subunit
RPT5B | chr1:2936675-2939258 REVERSE LENGTH=423
Length = 423
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 125/228 (54%), Gaps = 2/228 (0%)
Query: 158 FRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANE 217
+ D GG++K ++ L ++LP+ H +++ LG +P GVLL+GPPG GKT +A A A +
Sbjct: 169 YNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPP-KGVLLYGPPGTGKTLMARACAAQ 227
Query: 218 TRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHGME 277
T ++ LV G +RD F A + +P IIFIDEIDAI +KR +S+ +
Sbjct: 228 TNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGD 287
Query: 278 NRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESAR 337
+ +L +NQ I ATNR D +DPAL R GR D +I P E AR
Sbjct: 288 REVQRTMLELLNQ-LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
Query: 338 EDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLR 385
IL + +R + + ++ ++LARST F GA L + AG LA+ R
Sbjct: 347 GRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 394
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 27/155 (17%)
Query: 564 CFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE------------------- 604
F+ L GP+L+ ++G+ VR F A+ +PCI+F+DE
Sbjct: 231 TFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREV 290
Query: 605 ------LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKIL 658
LL +LDG + VI TNR + +D A+++ GRL + + PHP+ E R +IL
Sbjct: 291 QRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRIL 350
Query: 659 KALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
+ +R ++A V+ + R + ++ +GA+L+A+
Sbjct: 351 QIHSRKMNVNADVNFEELAR--STDDFNGAQLKAV 383
>AT5G15250.1 | Symbols: FTSH6, ATFTSH6 | FTSH protease 6 |
chr5:4950411-4952777 REVERSE LENGTH=688
Length = 688
Score = 146 bits (368), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/239 (38%), Positives = 134/239 (56%), Gaps = 11/239 (4%)
Query: 155 GKRFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHK-PEVSGVLLHGPPGCGKTELAHA 213
G F D G+ + + + E++ L P+++ LG K P+ GVLL GPPG GKT LA A
Sbjct: 220 GITFEDVAGVDEAKQDFE-EIVEFLKTPEKFSALGAKIPK--GVLLTGPPGTGKTLLAKA 276
Query: 214 IANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQ 273
IA E +P + +S + + G + RDLF+KA +P I+FIDEIDA+ R
Sbjct: 277 IAGEAGVPFFSLSGSEFIEMFVGVGASRARDLFNKAKANSPCIVFIDEIDAVGRMRGTGI 336
Query: 274 HGMEN---RMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIG 330
G + + ++Q+LT M+ I ATNRP+ +D AL RPGRFD ++++G
Sbjct: 337 GGGNDEREQTLNQILTEMD----GFAGNTGVIVIAATNRPEILDSALLRPGRFDRQVSVG 392
Query: 331 IPDESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLRIVDE 389
+PD RE+IL V +R ++ + L +A TPGF+GADL L+ A LA R D+
Sbjct: 393 LPDIRGREEILKVHSRSKKLDKDVSLSVIAMRTPGFSGADLANLMNEAAILAGRRGKDK 451
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 114/286 (39%), Gaps = 88/286 (30%)
Query: 436 FSSIPN--VKWEDVGGLDSLRDEFEDFIIGRIKDPELYEELGPQLSERCMEERNSMGPKQ 493
F PN + +EDV G+D + +FE+ I+ +K PE + LG ++ PK
Sbjct: 213 FQMEPNTGITFEDVAGVDEAKQDFEE-IVEFLKTPEKFSALGAKI------------PK- 258
Query: 494 LDERPSVCRPLKLNPLEKVVHTGKLGLGDYHLRLLMCTIFCMEVSTEVAFFECAHQGCCA 553
V+ TG G G T+ ++ E
Sbjct: 259 -----------------GVLLTGPPGTGK--------TLLAKAIAGEAGV---------- 283
Query: 554 LGPIILRLDFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDEL-------- 605
F L G E + +VG R LF++A+ +PCI+F+DE+
Sbjct: 284 ----------PFFSLSGSEFIEMFVGVGASRARDLFNKAKANSPCIVFIDEIDAVGRMRG 333
Query: 606 -----------------LTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPH 648
LTE+DG V VI TNRPE +D A+L+PGR + + V
Sbjct: 334 TGIGGGNDEREQTLNQILTEMDGFAGNTGVIVIAATNRPEILDSALLRPGRFDRQVSVGL 393
Query: 649 PSPEDRVKILKALARDTRLDAGVDLNVIGRMEACENMSGAELRALM 694
P R +ILK +R +LD V L+VI SGA+L LM
Sbjct: 394 PDIRGREEILKVHSRSKKLDKDVSLSVIAMR--TPGFSGADLANLM 437
>AT1G03000.1 | Symbols: PEX6 | peroxin 6 | chr1:688057-692453
REVERSE LENGTH=941
Length = 941
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 160/314 (50%), Gaps = 28/314 (8%)
Query: 149 GEVEVKGKRFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKT 208
G +V ++ D GG++ V + V LPL H K+ G + SGVLL+GPPG GKT
Sbjct: 648 GAPKVPNVKWDDVGGLEDVKTSILDTVQLPLLH-KDLFSSGLRKR-SGVLLYGPPGTGKT 705
Query: 209 ELAHAIANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASK 268
LA A+A E L + L++ G SE N+RD+F KA P +IF DE+D++A
Sbjct: 706 LLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPA 765
Query: 269 RENS--QHGMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCE 326
R S G+ +R+VSQ+L ++ IGA+NRPD +DPAL RPGRFD
Sbjct: 766 RGASGDSGGVMDRVVSQMLAEID---GLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKL 822
Query: 327 INIGI-PDESAREDILSVLTRGLLIEGPIDLKKLARSTPG-FAGADLVCLVKIAGKLAML 384
+ +G+ D S RE +L LTR + + L +A+ P F GAD+ L A A
Sbjct: 823 LYVGVNADASYRERVLKALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAA- 881
Query: 385 RIVDERYVMREFLEDWLMESWSREERDKLALKMSDFEEAIKVVQPSTRREGFSSIPNVKW 444
+R V + D E ++ D + ++ DF +A+ + PS SI +K
Sbjct: 882 ----KRKVSKSDSGDMPTE---EDDPDSVVVEYVDFIKAMDQLSPSL------SITELKK 928
Query: 445 EDVGGLDSLRDEFE 458
++ LRD+F+
Sbjct: 929 YEM-----LRDQFQ 937
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 151/578 (26%), Positives = 239/578 (41%), Gaps = 133/578 (23%)
Query: 178 PLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANETRLPLYPISATALVSAGSGS 237
PLC L K V+ VLLHG PGCGK + +A L + S +L+++
Sbjct: 366 PLCP----SALASKLRVA-VLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSERK 420
Query: 238 SEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHGM--------------------- 276
+ + F+ A + +P+I+ + D K SQ G
Sbjct: 421 TSTALAQTFNMARRYSPTILLLRHFDVF--KNLGSQDGSLGDRVGVSFEIASVIRELTEP 478
Query: 277 ----ENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIP 332
++ M + + ++ I + + + P +RR F EI +G
Sbjct: 479 VSNGDSSMEEKSNSNFSENEVGKFRGHQVLLIASAESTEGISPTIRRC--FSHEIRMGSL 536
Query: 333 DESAREDILSVLTRG----LLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLRIVD 388
++ R ++LS +G L I +K L T GF DL LV AG A L I
Sbjct: 537 NDEQRSEMLSQSLQGVSQFLNISSDEFMKGLVGQTSGFLPRDLQALVADAG--ANLYISQ 594
Query: 389 ERYVMR-EFLEDWL--MESWSREERDKLALKMSDFEEAIKVVQPSTRRE----GFSSIPN 441
E + L D L ++ + D K++ E+ K + S +R G +PN
Sbjct: 595 ESETKKINSLSDDLHGVDIHQASQIDNSTEKLTAKEDFTKALDRSKKRNASALGAPKVPN 654
Query: 442 VKWEDVGGLDSLRDEFEDFIIGRIKDPELYEELGPQLSERCMEERNSMGPKQLDERPSVC 501
VKW+DVGGL+ ++ I+ ++ P L+++L S G
Sbjct: 655 VKWDDVGGLEDVKTS----ILDTVQLPLLHKDL------------FSSG----------- 687
Query: 502 RPLKLNPLEKVVHTGKLGLGDYHLRLLMCTIFCMEVSTEVAFFECAHQGCCALGPIILRL 561
L V+ G G G T+ V+TE C+L
Sbjct: 688 ----LRKRSGVLLYGPPGTGK--------TLLAKAVATE-----------CSLN------ 718
Query: 562 DFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDEL---------------- 605
F+ ++GPEL+N Y+GESE VR +F +AR+ PC++F DEL
Sbjct: 719 ---FLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGV 775
Query: 606 --------LTELDG-KEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVP-HPSPEDRV 655
L E+DG + +D+++IG +NRP+ +D A+L+PGR K LYV + R
Sbjct: 776 MDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRE 835
Query: 656 KILKALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
++LKAL R +L V L + + + +GA++ AL
Sbjct: 836 RVLKALTRKFKLSEDVSLYSVAK-KCPSTFTGADMYAL 872
>AT1G06430.1 | Symbols: FTSH8 | FTSH protease 8 |
chr1:1960214-1962525 REVERSE LENGTH=685
Length = 685
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 128/235 (54%), Gaps = 11/235 (4%)
Query: 155 GKRFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHK-PEVSGVLLHGPPGCGKTELAHA 213
G F D G+ + + EV+ L P+ + +G + P+ GVLL GPPG GKT LA A
Sbjct: 216 GVTFDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGARIPK--GVLLVGPPGTGKTLLAKA 272
Query: 214 IANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQ 273
IA E +P + IS + V G + +RDLF KA + AP I+F+DEIDA+ +R
Sbjct: 273 IAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGI 332
Query: 274 HGMEN---RMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIG 330
G + + ++QLLT M+ + ATNR D +D AL RPGRFD ++++
Sbjct: 333 GGGNDEREQTLNQLLTEMD----GFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVD 388
Query: 331 IPDESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLR 385
+PD R DIL V + E + L+ +A TPGF+GADL L+ A LA R
Sbjct: 389 VPDVKGRTDILKVHSGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRR 443
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 87/209 (41%), Gaps = 33/209 (15%)
Query: 565 FMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE-------------------- 604
F + G E + +VG VR LF +A+ APCI+F+DE
Sbjct: 281 FFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDERE 340
Query: 605 -----LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILK 659
LLTE+DG E V V+ TNR + +D A+L+PGR + + V P + R ILK
Sbjct: 341 QTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILK 400
Query: 660 ALARDTRLDAGVDLNVIGRMEACENMSGAELRALMGXXXXXXXXXXXXGTNTTRTIKTHH 719
+ + + ++GV L VI SGA+L L+ G I +
Sbjct: 401 VHSGNKKFESGVSLEVIAMR--TPGFSGADLANLL------NEAAILAGRRGKTAISSKE 452
Query: 720 FDAAFSKISASKSDKIFNVNLRLSKVKYH 748
D + +I A + S V YH
Sbjct: 453 IDDSIDRIVAGMEGTVMTDGKSKSLVAYH 481
>AT5G43010.1 | Symbols: RPT4A | regulatory particle triple-A ATPase
4A | chr5:17248563-17251014 REVERSE LENGTH=399
Length = 399
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 129/239 (53%), Gaps = 6/239 (2%)
Query: 158 FRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANE 217
+ GG+ + L+ + LPL +P+ + +G KP GVLL+GPPG GKT LA AIA+
Sbjct: 138 YSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASN 196
Query: 218 TRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHGME 277
+ ++A++ G S IR++F+ A + P IIF+DEIDAI +R + +
Sbjct: 197 IDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSAD 256
Query: 278 NRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESAR 337
+ L+ +NQ I ATNRPD +DPAL RPGR D +I I +P+E +R
Sbjct: 257 REIQRTLMELLNQLDGFDNLGKVKM-IMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 315
Query: 338 EDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLRIVDER-YVMRE 395
DIL + G+ G ID + + + GF GADL + AG M I ER YV+ E
Sbjct: 316 MDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAG---MFAIRAERDYVIHE 371
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 80/158 (50%), Gaps = 27/158 (17%)
Query: 561 LDFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE---------------- 604
+D F+ + +++KY+GES +R +F+ AR PCI+F+DE
Sbjct: 197 IDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSAD 256
Query: 605 ---------LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRV 655
LL +LDG + V +I TNRP+ +D A+L+PGRL + + +P P+ + R+
Sbjct: 257 REIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRM 316
Query: 656 KILKALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
ILK A +D I ++ E +GA+LR +
Sbjct: 317 DILKIHAAGIAKHGEIDYEAIVKL--AEGFNGADLRNI 352
>AT2G30950.1 | Symbols: VAR2, FTSH2 | FtsH extracellular protease
family | chr2:13174692-13177064 FORWARD LENGTH=695
Length = 695
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 127/235 (54%), Gaps = 11/235 (4%)
Query: 155 GKRFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHK-PEVSGVLLHGPPGCGKTELAHA 213
G F D G+ + + EV+ L P+ + +G K P+ GVLL GPPG GKT LA A
Sbjct: 223 GVTFDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGAKIPK--GVLLIGPPGTGKTLLAKA 279
Query: 214 IANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQ 273
IA E +P + IS + V G + +RDLF KA + AP I+F+DEIDA+ +R
Sbjct: 280 IAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGI 339
Query: 274 HGMEN---RMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIG 330
G + + ++QLLT M+ + ATNR D +D AL RPGRFD ++++
Sbjct: 340 GGGNDEREQTLNQLLTEMD----GFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVD 395
Query: 331 IPDESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLR 385
+PD R DIL V + + L+ +A TPGF+GADL L+ A LA R
Sbjct: 396 VPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRR 450
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 86/209 (41%), Gaps = 33/209 (15%)
Query: 565 FMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE-------------------- 604
F + G E + +VG VR LF +A+ APCI+F+DE
Sbjct: 288 FFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDERE 347
Query: 605 -----LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILK 659
LLTE+DG E V V+ TNR + +D A+L+PGR + + V P + R ILK
Sbjct: 348 QTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILK 407
Query: 660 ALARDTRLDAGVDLNVIGRMEACENMSGAELRALMGXXXXXXXXXXXXGTNTTRTIKTHH 719
A + + D V L +I SGA+L L+ G +I +
Sbjct: 408 VHAGNKKFDNDVSLEIIAMR--TPGFSGADLANLL------NEAAILAGRRARTSISSKE 459
Query: 720 FDAAFSKISASKSDKIFNVNLRLSKVKYH 748
D + +I A + S V YH
Sbjct: 460 IDDSIDRIVAGMEGTVMTDGKSKSLVAYH 488
>AT5G08470.1 | Symbols: PEX1 | peroxisome 1 | chr5:2735925-2742731
FORWARD LENGTH=1130
Length = 1130
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/223 (39%), Positives = 121/223 (54%), Gaps = 9/223 (4%)
Query: 158 FRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEV--SGVLLHGPPGCGKTELAHAIA 215
+ D GG+ + +K + LP PK + P S VLL+GPPGCGKT + A A
Sbjct: 843 WEDVGGVTDIKNAIKEMIELPSKFPK---IFAKSPLRLRSNVLLYGPPGCGKTHIVGAAA 899
Query: 216 NETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHG 275
L + L++ G+SE +RD+FSKA AP I+F DE D+IA KR + G
Sbjct: 900 AACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTG 959
Query: 276 MENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDES 335
+ +R+V+Q LT ++ AT+RPD +DPAL RPGR D + P
Sbjct: 960 VTDRVVNQFLTELD----GVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSPP 1015
Query: 336 AREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIA 378
R +IL+VL+R LL+ IDL+ +A T GF+GADL L+ A
Sbjct: 1016 ERLEILTVLSRKLLMADDIDLEPIALMTEGFSGADLQALLSDA 1058
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 145/539 (26%), Positives = 229/539 (42%), Gaps = 110/539 (20%)
Query: 192 PEVSGVLLHGPPGCGKTELAHAIANETRLPLYPISATALVSAGSGSSEAN------IRDL 245
P +L++GPPG GKT LA A A ++ LVS + + E + +
Sbjct: 591 PSPGHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSV 650
Query: 246 FSKAYKTAPSIIFIDEIDAIASKR---ENSQHGMENRMVSQLLTCM----NQXXXXXXXX 298
++ + APS+I +D++D+I S E +Q + M+++ LT + +
Sbjct: 651 IAEGLEHAPSVIILDDLDSIISSSSDTEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCGI 710
Query: 299 XXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESAREDILSVLTRGLLIEGPID-LK 357
+ + + + L GRFD + + P S R IL + L++ D L
Sbjct: 711 GPLAFVASVQSLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILL 770
Query: 358 KLARSTPGFAGADLVCLVKIAGKLAMLRIVDERYVMREFLEDWLMESWSREERDKLALKM 417
LA G+ DL LV A A+ R + + ++ + + E ++R D + + M
Sbjct: 771 NLAAKCEGYDAYDLEILVDRAVHAAIGRHLPLESNISKY--NLVKEDFTRAMHDFVPVAM 828
Query: 418 SDFEEAIKVVQPSTRREGFSSIPNVKWEDVGGLDSLRDEFEDFIIGRIKDPELYEELGPQ 477
D + + EG + WEDVGG+ +++ ++ I K P+++ +
Sbjct: 829 RDITK--------SASEG----GRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAK---- 872
Query: 478 LSERCMEERNSMGPKQLDERPSVCRPLKLNPLEKVVHTGKLGLGDYHLRLLMCTIFCMEV 537
PL+L V+ G G G H+
Sbjct: 873 ------------------------SPLRLR--SNVLLYGPPGCGKTHIV----------- 895
Query: 538 STEVAFFECAHQGCCALGPIILRLDFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAP 597
A C+L F+ ++GPELLNKY+G SE AVR +FS+A AP
Sbjct: 896 --------GAAAAACSLR---------FISVKGPELLNKYIGASEQAVRDIFSKAAAAAP 938
Query: 598 CILFLDEL----------------------LTELDGKEQRKDVYVIGTTNRPEAVDRAIL 635
CILF DE LTELDG E V+V T+RP+ +D A+L
Sbjct: 939 CILFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDPALL 998
Query: 636 QPGRLGKHLYVPHPSPEDRVKILKALARDTRLDAGVDLNVIGRMEACENMSGAELRALM 694
+PGRL + L PSP +R++IL L+R + +DL I M E SGA+L+AL+
Sbjct: 999 RPGRLDRLLLCDFPSPPERLEILTVLSRKLLMADDIDLEPIALM--TEGFSGADLQALL 1055
>AT5G53170.1 | Symbols: FTSH11 | FTSH protease 11 |
chr5:21563023-21567922 REVERSE LENGTH=806
Length = 806
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 122/225 (54%), Gaps = 9/225 (4%)
Query: 156 KRFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHK-PEVSGVLLHGPPGCGKTELAHAI 214
K F+D G + L+ EV+ L +P ++ LG K P+ G+LL G PG GKT LA AI
Sbjct: 359 KTFKDVKGCDDAKQELE-EVVEYLKNPSKFTRLGGKLPK--GILLTGAPGTGKTLLAKAI 415
Query: 215 ANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQH 274
A E +P + + + G +R LF A K AP IIFIDEIDA+ S R+ +
Sbjct: 416 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWE- 474
Query: 275 GMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDE 334
G + + QLL M+ + ATN PD +DPAL RPGRFD I + PD
Sbjct: 475 GHTKKTLHQLLVEMD----GFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDV 530
Query: 335 SAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAG 379
RE+IL + +G + +D+K +AR TPGF GADL LV IA
Sbjct: 531 RGREEILELYLQGKPMSEDVDVKAIARGTPGFNGADLANLVNIAA 575
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 23/151 (15%)
Query: 565 FMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE-------------------- 604
F G E +VG VR+LF A+ APCI+F+DE
Sbjct: 423 FFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKKTLH 482
Query: 605 -LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILKALAR 663
LL E+DG EQ + + V+ TN P+ +D A+ +PGR +H+ VP P R +IL+ +
Sbjct: 483 QLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGREEILELYLQ 542
Query: 664 DTRLDAGVDLNVIGRMEACENMSGAELRALM 694
+ VD+ I R +GA+L L+
Sbjct: 543 GKPMSEDVDVKAIAR--GTPGFNGADLANLV 571
>AT1G45000.1 | Symbols: | AAA-type ATPase family protein |
chr1:17009220-17011607 FORWARD LENGTH=399
Length = 399
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/239 (37%), Positives = 129/239 (53%), Gaps = 6/239 (2%)
Query: 158 FRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANE 217
+ GG+ + L+ + LPL +P+ + +G KP GVLL+GPPG GKT LA AIA+
Sbjct: 138 YSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASN 196
Query: 218 TRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHGME 277
+ ++A++ G S IR++F+ A + P IIF+DEIDAI +R + +
Sbjct: 197 IDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSAD 256
Query: 278 NRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESAR 337
+ L+ +NQ I ATNRPD +DPAL RPGR D +I I +P+E +R
Sbjct: 257 REIQRTLMELLNQLDGFDQLGKVKM-IMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 315
Query: 338 EDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLRIVDER-YVMRE 395
+IL + G+ G ID + + + GF GADL + AG M I ER YV+ E
Sbjct: 316 MEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAG---MFAIRAERDYVIHE 371
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 27/158 (17%)
Query: 561 LDFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE---------------- 604
+D F+ + +++KY+GES +R +F+ AR PCI+F+DE
Sbjct: 197 IDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSAD 256
Query: 605 ---------LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRV 655
LL +LDG +Q V +I TNRP+ +D A+L+PGRL + + +P P+ + R+
Sbjct: 257 REIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRM 316
Query: 656 KILKALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
+ILK A +D I ++ E +GA+LR +
Sbjct: 317 EILKIHASGIAKHGEIDYEAIVKL--GEGFNGADLRNI 352
>AT1G53750.1 | Symbols: RPT1A | regulatory particle triple-A 1A |
chr1:20065921-20068324 REVERSE LENGTH=426
Length = 426
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 118/226 (52%), Gaps = 2/226 (0%)
Query: 158 FRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANE 217
+ D GG K+ +E+++ V LP+ HP+++ LG P GVL +GPPG GKT LA A+AN
Sbjct: 167 YNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPP-KGVLCYGPPGTGKTLLARAVANR 225
Query: 218 TRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHGME 277
T + + LV G +R+LF A I+F DE+DAI R + G +
Sbjct: 226 TDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGD 285
Query: 278 NRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESAR 337
N + +L +NQ + ATNRPD +DPAL RPGR D ++ G+PD +R
Sbjct: 286 NEVQRTMLEIVNQLDGFDARGNIKVLM-ATNRPDTLDPALLRPGRLDRKVEFGLPDLESR 344
Query: 338 EDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAM 383
I + TR + E I + LAR P GAD+ + AG A+
Sbjct: 345 TQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAI 390
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 27/159 (16%)
Query: 560 RLDFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE--------------- 604
R D CF+ + G EL+ KYVGE VR LF AR+ CI+F DE
Sbjct: 225 RTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGG 284
Query: 605 ----------LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDR 654
++ +LDG + R ++ V+ TNRP+ +D A+L+PGRL + + P E R
Sbjct: 285 DNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESR 344
Query: 655 VKILKALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
+I K R + + ++ R+ C N +GA++R++
Sbjct: 345 TQIFKIHTRTMNCERDIRFELLARL--CPNSTGADIRSV 381
>AT3G02450.1 | Symbols: | cell division protein ftsH, putative |
chr3:502876-505030 REVERSE LENGTH=622
Length = 622
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 111/192 (57%), Gaps = 6/192 (3%)
Query: 196 GVLLHGPPGCGKTELAHAIANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPS 255
GVLL GPPG GKT LA A+A E +P + +SA+ V G A IRDLF+ A K +PS
Sbjct: 369 GVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVELFVGRGAARIRDLFNAARKNSPS 428
Query: 256 IIFIDEIDAIASKRENSQHGMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDP 315
IIFIDE+DA+ KR S + ++ ++QLLT M+ I ATNRP+A+D
Sbjct: 429 IIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDG----FESDTKVIVIAATNRPEALDS 484
Query: 316 ALRRPGRFDCEINIGIPDESAREDILSVLTRGLLIEGPIDL--KKLARSTPGFAGADLVC 373
AL RPGRF ++ + PD+ R IL++ R + +E L +A TPGF GADL
Sbjct: 485 ALCRPGRFSRKVLVAEPDQEGRRKILAIHLRDVPLEEDAFLICDLVASLTPGFVGADLAN 544
Query: 374 LVKIAGKLAMLR 385
+V A LA R
Sbjct: 545 IVNEAALLAARR 556
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 60/126 (47%), Gaps = 22/126 (17%)
Query: 565 FMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDEL------------------- 605
F + E + +VG +R LF+ AR +P I+F+DEL
Sbjct: 395 FFSVSASEFVELFVGRGAARIRDLFNAARKNSPSIIFIDELDAVGGKRGRSFNDERDQTL 454
Query: 606 ---LTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILKALA 662
LTE+DG E V VI TNRPEA+D A+ +PGR + + V P E R KIL
Sbjct: 455 NQLLTEMDGFESDTKVIVIAATNRPEALDSALCRPGRFSRKVLVAEPDQEGRRKILAIHL 514
Query: 663 RDTRLD 668
RD L+
Sbjct: 515 RDVPLE 520
>AT4G29040.1 | Symbols: RPT2a | regulatory particle AAA-ATPase 2A |
chr4:14312369-14314386 FORWARD LENGTH=443
Length = 443
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 123/226 (54%), Gaps = 2/226 (0%)
Query: 158 FRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANE 217
+ D GG++ ++ +K V LPL HP+ + +G KP GV+L+G PG GKT LA A+AN
Sbjct: 187 YADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPP-KGVILYGEPGTGKTLLAKAVANS 245
Query: 218 TRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHGME 277
T + + L+ G +R+LF A +PSI+FIDEIDA+ +KR ++ G E
Sbjct: 246 TSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGE 305
Query: 278 NRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESAR 337
+ +L +NQ + ATNR +++DPAL RPGR D +I +PD R
Sbjct: 306 REIQRTMLELLNQLDGFDSRGDVKVIL-ATNRIESLDPALLRPGRIDRKIEFPLPDIKTR 364
Query: 338 EDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAM 383
I + T + + ++L++ + F+GAD+ + AG LA+
Sbjct: 365 RRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLAL 410
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 114/279 (40%), Gaps = 85/279 (30%)
Query: 440 PNVKWEDVGGLDSLRDEFEDFIIGRIKDPELYEELGPQLSERCMEERNSMGPKQLDERPS 499
P + D+GGL++ E ++ + + PELYE++G
Sbjct: 183 PLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIG------------------------ 218
Query: 500 VCRPLKLNPLEKVVHTGKLGLGDYHLRLLMCTIFCMEVSTEVAFFECAHQGCCALGPIIL 559
+ P + V+ G+ G G T+ V+ +
Sbjct: 219 ------IKPPKGVILYGEPGTGK--------TLLAKAVANSTSA---------------- 248
Query: 560 RLDFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE--------------- 604
F+ + G EL+ KY+G+ VR LF A +P I+F+DE
Sbjct: 249 ----TFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGG 304
Query: 605 ----------LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDR 654
LL +LDG + R DV VI TNR E++D A+L+PGR+ + + P P + R
Sbjct: 305 EREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTR 364
Query: 655 VKILKALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
+I + +++ D+N+ + + SGA+++A+
Sbjct: 365 RRIFQ--IHTSKMTLSEDVNLEEFVMTKDEFSGADIKAI 401
>AT2G20140.1 | Symbols: | AAA-type ATPase family protein |
chr2:8692736-8694837 FORWARD LENGTH=443
Length = 443
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 123/226 (54%), Gaps = 2/226 (0%)
Query: 158 FRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANE 217
+ D GG++ ++ +K V LPL HP+ + +G KP GV+L+G PG GKT LA A+AN
Sbjct: 187 YADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPP-KGVILYGEPGTGKTLLAKAVANS 245
Query: 218 TRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHGME 277
T + + L+ G +R+LF A +PSI+FIDEIDA+ +KR ++ G E
Sbjct: 246 TSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGE 305
Query: 278 NRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESAR 337
+ +L +NQ + ATNR +++DPAL RPGR D +I +PD R
Sbjct: 306 REIQRTMLELLNQLDGFDSRGDVKVIL-ATNRIESLDPALLRPGRIDRKIEFPLPDIKTR 364
Query: 338 EDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAM 383
I + T + + ++L++ + F+GAD+ + AG LA+
Sbjct: 365 RRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLAL 410
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 27/155 (17%)
Query: 564 CFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE------------------- 604
F+ + G EL+ KY+G+ VR LF A +P I+F+DE
Sbjct: 249 TFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGEREI 308
Query: 605 ------LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKIL 658
LL +LDG + R DV VI TNR E++D A+L+PGR+ + + P P + R +I
Sbjct: 309 QRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF 368
Query: 659 KALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
+ +++ D+N+ + + SGA+++A+
Sbjct: 369 Q--IHTSKMTLAEDVNLEEFVMTKDEFSGADIKAI 401
>AT2G26140.1 | Symbols: ftsh4 | FTSH protease 4 |
chr2:11131939-11135126 REVERSE LENGTH=717
Length = 717
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 128/254 (50%), Gaps = 9/254 (3%)
Query: 157 RFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHK-PEVSGVLLHGPPGCGKTELAHAIA 215
+F D G+ + L+ E++ L PK + LG K P+ GVLL GPPG GKT LA AIA
Sbjct: 225 KFSDVKGVDEAKAELE-EIVHYLRDPKRFTRLGGKLPK--GVLLVGPPGTGKTMLARAIA 281
Query: 216 NETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHG 275
E +P + S + G +RDLFS A K +P IIFIDEIDAI R
Sbjct: 282 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIGGSRNPKDQQ 341
Query: 276 MENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDES 335
++Q+L ++ + ATN P+++D AL RPGRFD I + PD
Sbjct: 342 YMKMTLNQMLVELD----GFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVE 397
Query: 336 AREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAG-KLAMLRIVDERYVMR 394
R IL +L +DL +AR TPGF+GADL LV +A K AM D
Sbjct: 398 GRRQILESHMSKVLKAEDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGSKDVTMSDL 457
Query: 395 EFLEDWLMESWSRE 408
EF +D +M R+
Sbjct: 458 EFAKDRIMMGSERK 471
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 121/292 (41%), Gaps = 94/292 (32%)
Query: 427 VQPSTRREGFSSIPNVKWEDVGGLDSLRDEFEDFIIGRIKDPELYEELGPQLSERCMEER 486
VQPS + K+ DV G+D + E E+ I+ ++DP+ + LG +L
Sbjct: 216 VQPSMD-------SSTKFSDVKGVDEAKAELEE-IVHYLRDPKRFTRLGGKL-------- 259
Query: 487 NSMGPKQLDERPSVCRPLKLNPLEKVVHTGKLGLGDYHLRLLMCTIFCMEVSTE--VAFF 544
PK V+ G G G T+ ++ E V FF
Sbjct: 260 ----PK------------------GVLLVGPPGTGK--------TMLARAIAGEAGVPFF 289
Query: 545 ECAHQGCCALGPIILRLDFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE 604
C+ G E +VG VR LFS A+ C+PCI+F+DE
Sbjct: 290 SCS----------------------GSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDE 327
Query: 605 ----------------------LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGK 642
+L ELDG +Q + + V+ TN PE++D+A+++PGR +
Sbjct: 328 IDAIGGSRNPKDQQYMKMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDR 387
Query: 643 HLYVPHPSPEDRVKILKALARDTRLDAGVDLNVIGRMEACENMSGAELRALM 694
H+ VP+P E R +IL++ VDL +I R SGA+L L+
Sbjct: 388 HIVVPNPDVEGRRQILESHMSKVLKAEDVDLMIIAR--GTPGFSGADLANLV 437
>AT5G64580.1 | Symbols: | AAA-type ATPase family protein |
chr5:25817391-25821465 REVERSE LENGTH=855
Length = 855
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 135/252 (53%), Gaps = 11/252 (4%)
Query: 152 EVKGKRFRDFGGMKKVLERLKREVLLPLCHPKEWRMLG-HKPEVSGVLLHGPPGCGKTEL 210
E G F DF G ++ ++R +E++ L + +E++ G + P+ GVLLHGPPG GKT L
Sbjct: 309 EKTGVTFDDFAG-QEYIKRELQEIVRILKNDEEFQNKGIYCPK--GVLLHGPPGTGKTLL 365
Query: 211 AHAIANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRE 270
A AIA E LP + + T V G + + ++DLF+ + APSIIFIDEIDAI SKR
Sbjct: 366 AKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIFIDEIDAIGSKRG 425
Query: 271 NSQHGMENRMVSQ-LLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINI 329
G Q LL + + IGATNR D +DPAL R GRFD I +
Sbjct: 426 GPDIGGGGAEREQGLLQILTEMDGFKVTTSQVLVIGATNRLDILDPALLRKGRFDKIIRV 485
Query: 330 GIPDESAREDILSVLTRGLLIEGPID----LKKLARSTPGFAGADLVCLVKIAGKLAMLR 385
G+P + R IL V R + L+++A +T F GA+L ++ AG L +
Sbjct: 486 GLPSKDGRLAILKVHARNKFFRSEDEKEELLQEVAENTEDFTGAELQNVLNEAGILTARK 545
Query: 386 IVDERYVMREFL 397
+D Y+ RE L
Sbjct: 546 DLD--YIGREEL 555
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 29/160 (18%)
Query: 565 FMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDEL------------------- 605
F G + + +VG + V+ LF+ +R+ AP I+F+DE+
Sbjct: 377 FFAANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIFIDEIDAIGSKRGGPDIGGGGAER 436
Query: 606 -------LTELDG-KEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKI 657
LTE+DG K V VIG TNR + +D A+L+ GR K + V PS + R+ I
Sbjct: 437 EQGLLQILTEMDGFKVTTSQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPSKDGRLAI 496
Query: 658 LKALARDTRLDAGVDLNVIGR--MEACENMSGAELRALMG 695
LK AR+ + + + + E E+ +GAEL+ ++
Sbjct: 497 LKVHARNKFFRSEDEKEELLQEVAENTEDFTGAELQNVLN 536
>AT5G19990.1 | Symbols: RPT6A, ATSUG1 | regulatory particle triple-A
ATPase 6A | chr5:6752144-6754918 FORWARD LENGTH=419
Length = 419
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 124/224 (55%), Gaps = 3/224 (1%)
Query: 161 FGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANETRL 220
GG+ + ++ +K + LP+ HP+ + LG + GVLL+GPPG GKT LA A+A+ T
Sbjct: 163 IGGLDQQIKEIKEVIELPIKHPELFESLG-IAQPKGVLLYGPPGTGKTLLARAVAHHTDC 221
Query: 221 PLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHGMENRM 280
+S + LV G +R+LF A + APSIIF+DEID+I S R S G +
Sbjct: 222 TFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSE 281
Query: 281 VSQ-LLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESARED 339
V + +L +NQ + ATNR D +D AL RPGR D +I P+E +R D
Sbjct: 282 VQRTMLELLNQLDGFEASNKIKVLM-ATNRIDILDQALLRPGRIDRKIEFPNPNEESRFD 340
Query: 340 ILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAM 383
IL + +R + + IDLKK+A G +GA+L + AG A+
Sbjct: 341 ILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFAL 384
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 120/293 (40%), Gaps = 86/293 (29%)
Query: 427 VQPSTRREGFSSIPNVKWEDVGGLDSLRDEFEDFIIGRIKDPELYEELGPQLSERCMEER 486
V P +P+ ++ +GGLD E ++ I IK PEL+E
Sbjct: 143 VDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFE-------------- 188
Query: 487 NSMGPKQLDERPSVCRPLKLNPLEKVVHTGKLGLGDYHLRLLMCTIFCMEVSTEVAFFEC 546
S+G + +P + V+ G G G T+ V
Sbjct: 189 -SLG---------IAQP------KGVLLYGPPGTGK--------TLLARAV--------- 215
Query: 547 AHQGCCALGPIILRLDFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE-- 604
AH C F+ + G EL+ KY+GE VR LF AR AP I+F+DE
Sbjct: 216 AHHTDC-----------TFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 264
Query: 605 ------------------------LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRL 640
LL +LDG E + V+ TNR + +D+A+L+PGR+
Sbjct: 265 SIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRI 324
Query: 641 GKHLYVPHPSPEDRVKILKALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
+ + P+P+ E R ILK +R L G+DL I E SGAEL+A+
Sbjct: 325 DRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIA--EKMNGASGAELKAV 375
>AT5G20000.1 | Symbols: | AAA-type ATPase family protein |
chr5:6756915-6759550 FORWARD LENGTH=419
Length = 419
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 132/245 (53%), Gaps = 4/245 (1%)
Query: 141 KATSTVNEGEVE-VKGKRFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLL 199
K VN +VE V + GG+ + ++ +K + LP+ HP+ + LG + GVLL
Sbjct: 142 KVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLG-IAQPKGVLL 200
Query: 200 HGPPGCGKTELAHAIANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFI 259
+GPPG GKT LA A+A+ T +S + LV G +R+LF A + APSIIF+
Sbjct: 201 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
Query: 260 DEIDAIASKRENSQHGMENRMVSQ-LLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALR 318
DEID+I S R S G + V + +L +NQ + ATNR D +D AL
Sbjct: 261 DEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLM-ATNRIDILDQALL 319
Query: 319 RPGRFDCEINIGIPDESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIA 378
RPGR D +I P+E +R DIL + +R + + IDLKK+A G +GA+L + A
Sbjct: 320 RPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEA 379
Query: 379 GKLAM 383
G A+
Sbjct: 380 GMFAL 384
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 120/293 (40%), Gaps = 86/293 (29%)
Query: 427 VQPSTRREGFSSIPNVKWEDVGGLDSLRDEFEDFIIGRIKDPELYEELGPQLSERCMEER 486
V P +P+ ++ +GGLD E ++ I IK PEL+E
Sbjct: 143 VDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFE-------------- 188
Query: 487 NSMGPKQLDERPSVCRPLKLNPLEKVVHTGKLGLGDYHLRLLMCTIFCMEVSTEVAFFEC 546
S+G + +P + V+ G G G T+ V
Sbjct: 189 -SLG---------IAQP------KGVLLYGPPGTGK--------TLLARAV--------- 215
Query: 547 AHQGCCALGPIILRLDFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE-- 604
AH C F+ + G EL+ KY+GE VR LF AR AP I+F+DE
Sbjct: 216 AHHTDC-----------TFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 264
Query: 605 ------------------------LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRL 640
LL +LDG E + V+ TNR + +D+A+L+PGR+
Sbjct: 265 SIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRI 324
Query: 641 GKHLYVPHPSPEDRVKILKALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
+ + P+P+ E R ILK +R L G+DL I E SGAEL+A+
Sbjct: 325 DRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIA--EKMNGASGAELKAV 375
>AT3G15120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5088487-5095482
REVERSE LENGTH=1954
Length = 1954
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 146/293 (49%), Gaps = 22/293 (7%)
Query: 155 GKRFRDF---GGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELA 211
GK F + G++ V + +K VL+PL +P+ + LG P G+LLHG PG GKT +
Sbjct: 712 GKAFEGWDSVAGLEGVTQCMKEVVLIPLLYPEFFDNLGLTPP-RGILLHGHPGTGKTLVV 770
Query: 212 HAIAN-----ETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIA 266
A+ R+ + + G +E +R LF A K PSIIF DEID +A
Sbjct: 771 RALIGSLARGNRRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLA 830
Query: 267 SKRENSQHGMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCE 326
KR Q + +VS LL ++ IGATN PDA+DPALRRPGRFD E
Sbjct: 831 PKRSRQQDQTHSSVVSTLLALLD----GLKSRGSVVVIGATNYPDAIDPALRRPGRFDRE 886
Query: 327 INIGIPDESAREDILSVLTRGL--LIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAML 384
I +P R I+S+ TR + G + LK +A+ T GFAGAD+ L A +A+
Sbjct: 887 IYFPLPSVDDRAAIISLHTRKWPKPVSGYL-LKWIAKETAGFAGADIQALCTQAAMIALN 945
Query: 385 RIVDERYVMREFL--EDWLMESWSREERDKLALKMSDFEEAIKVVQPSTRREG 435
R + ++E L + + S +R +++ D+ EA+ P R G
Sbjct: 946 R----SFPLQESLAAAELGVSSSNRAALPSFSVEERDWLEALSRSPPPCSRRG 994
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 75/154 (48%), Gaps = 25/154 (16%)
Query: 563 FCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE------------------ 604
+ +G + L KYVG++E +R LF A C P I+F DE
Sbjct: 784 IAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPKRSRQQDQTHSS 843
Query: 605 ----LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILKA 660
LL LDG + R V VIG TN P+A+D A+ +PGR + +Y P PS +DR I+
Sbjct: 844 VVSTLLALLDGLKSRGSVVVIGATNYPDAIDPALRRPGRFDREIYFPLPSVDDRAAIISL 903
Query: 661 LARD-TRLDAGVDLNVIGRMEACENMSGAELRAL 693
R + +G L I + A +GA+++AL
Sbjct: 904 HTRKWPKPVSGYLLKWIAKETA--GFAGADIQAL 935
>AT1G05910.1 | Symbols: | cell division cycle protein 48-related /
CDC48-related | chr1:1790796-1796503 FORWARD LENGTH=1210
Length = 1210
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 138/288 (47%), Gaps = 32/288 (11%)
Query: 158 FRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIA-- 215
F D GG+ + + LK V PL +P+ + P GVLL GPPG GKT +A A+A
Sbjct: 380 FDDIGGLSEYINDLKEMVFFPLLYPEFFASYSITPP-RGVLLCGPPGTGKTLIARALACA 438
Query: 216 ---NETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENS 272
++ Y ++S G +E ++ LF +A + PSIIF DEID +A R +
Sbjct: 439 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 498
Query: 273 QHGMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIP 332
Q + N +VS LL M+ IGATNR DA+D ALRRPGRFD E N +P
Sbjct: 499 QEQIHNSIVSTLLALMD----GLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFSLP 554
Query: 333 DESAREDILSVLTRGLLIEGPIDLK-KLARSTPGFAGADLVCLVKIAG------KLAMLR 385
AR +IL + TR +LK +LA + G+ GADL L A K +
Sbjct: 555 GCEARAEILDIHTRKWKHPPTRELKEELAATCVGYCGADLKALCTEAAIRAFREKYPQVY 614
Query: 386 IVDERYVMREFLEDWLMESWSREERDKLALKMSDFEEAIKVVQPSTRR 433
D++Y + L + ++ S F EA+ + P+ R
Sbjct: 615 TSDDKYAIDVGL---------------VNVEKSHFVEAMSAITPAAHR 647
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 69/152 (45%), Gaps = 23/152 (15%)
Query: 564 CFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE------------------- 604
F +G ++L+K+VGE+E ++ LF A+ P I+F DE
Sbjct: 447 SFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSI 506
Query: 605 ---LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILKAL 661
LL +DG + R V +IG TNR +A+D A+ +PGR + P E R +IL
Sbjct: 507 VSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFSLPGCEARAEILDIH 566
Query: 662 ARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
R + +L C GA+L+AL
Sbjct: 567 TRKWKHPPTRELKE-ELAATCVGYCGADLKAL 597
>AT5G15250.2 | Symbols: FTSH6 | FTSH protease 6 |
chr5:4950411-4952771 REVERSE LENGTH=709
Length = 709
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 135/262 (51%), Gaps = 34/262 (12%)
Query: 155 GKRFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHK-PEVSGVLLHGPPGCGKTELAHA 213
G F D G+ + + + E++ L P+++ LG K P+ GVLL GPPG GKT LA A
Sbjct: 218 GITFEDVAGVDEAKQDFE-EIVEFLKTPEKFSALGAKIPK--GVLLTGPPGTGKTLLAKA 274
Query: 214 IANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQ 273
IA E +P + +S + + G + RDLF+KA +P I+FIDEIDA+ R
Sbjct: 275 IAGEAGVPFFSLSGSEFIEMFVGVGASRARDLFNKAKANSPCIVFIDEIDAVGRMRGTGI 334
Query: 274 HGMEN---RMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFD---C-- 325
G + + ++Q+LT M+ I ATNRP+ +D AL RPGRFD C
Sbjct: 335 GGGNDEREQTLNQILTEMD----GFAGNTGVIVIAATNRPEILDSALLRPGRFDRQVCWL 390
Query: 326 ------------------EINIGIPDESAREDILSVLTRGLLIEGPIDLKKLARSTPGFA 367
++++G+PD RE+IL V +R ++ + L +A TPGF+
Sbjct: 391 ILKPNKSNRFGIMSTCFKQVSVGLPDIRGREEILKVHSRSKKLDKDVSLSVIAMRTPGFS 450
Query: 368 GADLVCLVKIAGKLAMLRIVDE 389
GADL L+ A LA R D+
Sbjct: 451 GADLANLMNEAAILAGRRGKDK 472
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 114/309 (36%), Gaps = 111/309 (35%)
Query: 436 FSSIPN--VKWEDVGGLDSLRDEFEDFIIGRIKDPELYEELGPQLSERCMEERNSMGPKQ 493
F PN + +EDV G+D + +FE+ I+ +K PE + LG ++ PK
Sbjct: 211 FQMEPNTGITFEDVAGVDEAKQDFEE-IVEFLKTPEKFSALGAKI------------PK- 256
Query: 494 LDERPSVCRPLKLNPLEKVVHTGKLGLGDYHLRLLMCTIFCMEVSTEVAFFECAHQGCCA 553
V+ TG G G T+ ++ E
Sbjct: 257 -----------------GVLLTGPPGTGK--------TLLAKAIAGEAGV---------- 281
Query: 554 LGPIILRLDFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDEL-------- 605
F L G E + +VG R LF++A+ +PCI+F+DE+
Sbjct: 282 ----------PFFSLSGSEFIEMFVGVGASRARDLFNKAKANSPCIVFIDEIDAVGRMRG 331
Query: 606 -----------------LTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLG------- 641
LTE+DG V VI TNRPE +D A+L+PGR
Sbjct: 332 TGIGGGNDEREQTLNQILTEMDGFAGNTGVIVIAATNRPEILDSALLRPGRFDRQVCWLI 391
Query: 642 ----------------KHLYVPHPSPEDRVKILKALARDTRLDAGVDLNVIGRMEACENM 685
K + V P R +ILK +R +LD V L+VI
Sbjct: 392 LKPNKSNRFGIMSTCFKQVSVGLPDIRGREEILKVHSRSKKLDKDVSLSVIAMR--TPGF 449
Query: 686 SGAELRALM 694
SGA+L LM
Sbjct: 450 SGADLANLM 458
>AT5G58290.1 | Symbols: RPT3 | regulatory particle triple-A ATPase 3
| chr5:23569155-23571116 FORWARD LENGTH=408
Length = 408
Score = 133 bits (335), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 121/236 (51%), Gaps = 5/236 (2%)
Query: 158 FRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANE 217
+ D GG + ++ V LPL H + ++ +G P GVLL+GPPG GKT LA A+AN
Sbjct: 154 YNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPP-RGVLLYGPPGTGKTMLAKAVANH 212
Query: 218 TRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHGME 277
T + + V G +RD+F A + AP+IIFIDE+DAIA+ R ++Q G +
Sbjct: 213 TTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGAD 272
Query: 278 NRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESAR 337
+ L+ +NQ I ATNR D +DPAL RPGR D +I +PD +
Sbjct: 273 REVQRILMELLNQ-MDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 331
Query: 338 EDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLRIVDERYVM 393
+ V T + + +DL+ + A++ + + AG A+ + RYV+
Sbjct: 332 RLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK---NRYVI 384
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 29/156 (18%)
Query: 564 CFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE------------------- 604
F+ + G E + KY+GE VR +F A+ AP I+F+DE
Sbjct: 216 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV 275
Query: 605 ------LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKIL 658
LL ++DG +Q +V VI TNR + +D A+L+PGRL + + P P + +
Sbjct: 276 QRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 335
Query: 659 KALARDTRLDAGVDL-NVIGRMEACENMSGAELRAL 693
+ L VDL + + R + +S AE+ A+
Sbjct: 336 QVCTSKMNLSDEVDLEDYVSR---PDKISAAEIAAI 368
>AT1G53780.2 | Symbols: | peptidyl-prolyl cis-trans
isomerases;hydrolases;nucleoside-triphosphatases;ATP
binding;nucleotide binding;ATPases |
chr1:20074212-20077713 REVERSE LENGTH=620
Length = 620
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 126/259 (48%), Gaps = 3/259 (1%)
Query: 126 GTVTKNVELEMGNSRKATSTVNEGEVEVK-GKRFRDFGGMKKVLERLKREVLLPLCHPKE 184
G K ++++ K +V VE K + D GG K+ +E+++ V LP+ HP++
Sbjct: 327 GVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEK 386
Query: 185 WRMLGHKPEVSGVLLHGPPGCGKTELAHAIANETRLPLYPISATALVSAGSGSSEANIRD 244
+ LG P GVL +GPPG GKT +A A+AN T + + LV G +R+
Sbjct: 387 FVRLGIDPP-KGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRE 445
Query: 245 LFSKAYKTAPSIIFIDEIDAIASKRENSQHGMENRMVSQLLTCMNQXXXXXXXXXXXXXI 304
LF A I+F DEIDAI R + G +N + +L + Q +
Sbjct: 446 LFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLM 505
Query: 305 GATNRPDAVDPALRRPGRFDCEINIGIPDESAREDILSVLTRGLLIEGPIDLKKLARSTP 364
ATNRPD +DPAL RPGR D ++ +PD R I + TR + E I + LA P
Sbjct: 506 -ATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCP 564
Query: 365 GFAGADLVCLVKIAGKLAM 383
GAD+ + AG A+
Sbjct: 565 NSTGADIRSVCIEAGMYAI 583
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 27/159 (16%)
Query: 560 RLDFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDEL-------------- 605
R CF+ + G EL+ KY+GE VR LF AR+ CILF DE+
Sbjct: 418 RTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGS 477
Query: 606 -----------LTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDR 654
L +LDG + R ++ V+ TNRP+ +D A+L+PGRL + + P E R
Sbjct: 478 DNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGR 537
Query: 655 VKILKALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
+I K R + + ++ + C N +GA++R++
Sbjct: 538 TQIFKIHTRTMSCERDIRFELLAGL--CPNSTGADIRSV 574
>AT1G80350.1 | Symbols: ERH3, AAA1, FRA2, LUE1, ATKTN1, KTN1, FRC2,
BOT1, FTR | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:30205499-30208050
REVERSE LENGTH=523
Length = 523
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 147/281 (52%), Gaps = 16/281 (5%)
Query: 155 GKRFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAI 214
G R+ D G+ + L+ V+LPL P+ ++ G + GVL+ GPPG GKT LA A+
Sbjct: 235 GVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQ--GIRRPWKGVLMFGPPGTGKTLLAKAV 292
Query: 215 ANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENS-Q 273
A E + +S+ L S G SE +R LF A APS IFIDEID++ + R S +
Sbjct: 293 ATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGGSGE 352
Query: 274 HGMENRMVSQLLTCM----NQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINI 329
H R+ S+LL + N + ATN P +D ALRR R + I I
Sbjct: 353 HESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRR--RLEKRIYI 410
Query: 330 GIPDESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLRIVDE 389
+PD +R+ ++++ R + + ++++ +AR T G++G DL + + A M R +
Sbjct: 411 PLPDFESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMRRKIAG 470
Query: 390 RYVMREFLEDWLMESWSREERDKLALKMSDFEEAIKVVQPS 430
+ R+ +++ S+++ + M DFEEAI+ VQPS
Sbjct: 471 K--TRDEIKN-----MSKDDISNDPVAMCDFEEAIRKVQPS 504
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 106/289 (36%), Gaps = 94/289 (32%)
Query: 433 REGFSSIPNVKWEDVGGLDSLRDEFEDFIIGRIKDPELYEELGPQLSERCMEERNSMGPK 492
R+ S P V+W+DV GL + E+ ++ + PE ++
Sbjct: 227 RDVLDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQ-------------------- 266
Query: 493 QLDERPSVCRPLKLNPLEKVVHTGKLGLGDYHLRLLMCTIFCMEVSTEVAFFECAHQGCC 552
+ RP K V+ G G G T+ V+TE C
Sbjct: 267 ------GIRRPWK-----GVLMFGPPGTGK--------TLLAKAVATE-----------C 296
Query: 553 ALGPIILRLDFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLD--------- 603
F ++ L +K+ GESE VR LF AR AP +F+D
Sbjct: 297 GT---------TFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSR 347
Query: 604 --------------ELLTELDGKEQ--------RKDVYVIGTTNRPEAVDRAILQPGRLG 641
ELL ++DG RK V V+ TN P +D A+ + RL
Sbjct: 348 GGSGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRR--RLE 405
Query: 642 KHLYVPHPSPEDRVKILKALARDTRLDAGVDLNVIGRMEACENMSGAEL 690
K +Y+P P E R ++ R + + V++ + R E SG +L
Sbjct: 406 KRIYIPLPDFESRKALININLRTVEVASDVNIEDVARR--TEGYSGDDL 452
>AT1G53780.1 | Symbols: | peptidyl-prolyl cis-trans
isomerases;hydrolases;nucleoside-triphosphatases;ATP
binding;nucleotide binding;ATPases |
chr1:20074212-20077235 REVERSE LENGTH=598
Length = 598
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 126/259 (48%), Gaps = 3/259 (1%)
Query: 126 GTVTKNVELEMGNSRKATSTVNEGEVEVK-GKRFRDFGGMKKVLERLKREVLLPLCHPKE 184
G K ++++ K +V VE K + D GG K+ +E+++ V LP+ HP++
Sbjct: 305 GVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEK 364
Query: 185 WRMLGHKPEVSGVLLHGPPGCGKTELAHAIANETRLPLYPISATALVSAGSGSSEANIRD 244
+ LG P GVL +GPPG GKT +A A+AN T + + LV G +R+
Sbjct: 365 FVRLGIDPP-KGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRE 423
Query: 245 LFSKAYKTAPSIIFIDEIDAIASKRENSQHGMENRMVSQLLTCMNQXXXXXXXXXXXXXI 304
LF A I+F DEIDAI R + G +N + +L + Q +
Sbjct: 424 LFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLM 483
Query: 305 GATNRPDAVDPALRRPGRFDCEINIGIPDESAREDILSVLTRGLLIEGPIDLKKLARSTP 364
ATNRPD +DPAL RPGR D ++ +PD R I + TR + E I + LA P
Sbjct: 484 -ATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCP 542
Query: 365 GFAGADLVCLVKIAGKLAM 383
GAD+ + AG A+
Sbjct: 543 NSTGADIRSVCIEAGMYAI 561
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 27/159 (16%)
Query: 560 RLDFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDEL-------------- 605
R CF+ + G EL+ KY+GE VR LF AR+ CILF DE+
Sbjct: 396 RTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGS 455
Query: 606 -----------LTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDR 654
L +LDG + R ++ V+ TNRP+ +D A+L+PGRL + + P E R
Sbjct: 456 DNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGR 515
Query: 655 VKILKALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
+I K R + + ++ + C N +GA++R++
Sbjct: 516 TQIFKIHTRTMSCERDIRFELLAGL--CPNSTGADIRSV 552
>AT1G53780.3 | Symbols: | peptidyl-prolyl cis-trans
isomerases;hydrolases;nucleoside-triphosphatases;ATP
binding;nucleotide binding;ATPases |
chr1:20074212-20077235 REVERSE LENGTH=599
Length = 599
Score = 129 bits (324), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 126/259 (48%), Gaps = 3/259 (1%)
Query: 126 GTVTKNVELEMGNSRKATSTVNEGEVEVK-GKRFRDFGGMKKVLERLKREVLLPLCHPKE 184
G K ++++ K +V VE K + D GG K+ +E+++ V LP+ HP++
Sbjct: 306 GVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEK 365
Query: 185 WRMLGHKPEVSGVLLHGPPGCGKTELAHAIANETRLPLYPISATALVSAGSGSSEANIRD 244
+ LG P GVL +GPPG GKT +A A+AN T + + LV G +R+
Sbjct: 366 FVRLGIDPP-KGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRE 424
Query: 245 LFSKAYKTAPSIIFIDEIDAIASKRENSQHGMENRMVSQLLTCMNQXXXXXXXXXXXXXI 304
LF A I+F DEIDAI R + G +N + +L + Q +
Sbjct: 425 LFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLM 484
Query: 305 GATNRPDAVDPALRRPGRFDCEINIGIPDESAREDILSVLTRGLLIEGPIDLKKLARSTP 364
ATNRPD +DPAL RPGR D ++ +PD R I + TR + E I + LA P
Sbjct: 485 -ATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCP 543
Query: 365 GFAGADLVCLVKIAGKLAM 383
GAD+ + AG A+
Sbjct: 544 NSTGADIRSVCIEAGMYAI 562
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 27/159 (16%)
Query: 560 RLDFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDEL-------------- 605
R CF+ + G EL+ KY+GE VR LF AR+ CILF DE+
Sbjct: 397 RTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGS 456
Query: 606 -----------LTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDR 654
L +LDG + R ++ V+ TNRP+ +D A+L+PGRL + + P E R
Sbjct: 457 DNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGR 516
Query: 655 VKILKALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
+I K R + + ++ + C N +GA++R++
Sbjct: 517 TQIFKIHTRTMSCERDIRFELLAGL--CPNSTGADIRSV 553
>AT1G07510.1 | Symbols: ftsh10 | FTSH protease 10 |
chr1:2305689-2309380 FORWARD LENGTH=813
Length = 813
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 124/232 (53%), Gaps = 14/232 (6%)
Query: 158 FRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHK-PEVSGVLLHGPPGCGKTELAHAIAN 216
F+D G ++ + + E + L +PK++ LG K P+ G LL GPPG GKT LA A A
Sbjct: 326 FKDVAGCEEAKQEI-MEFVHFLQNPKKYEDLGAKIPK--GALLVGPPGTGKTLLAKATAG 382
Query: 217 ETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAI--ASKRENSQH 274
E+ +P IS + + G + +R+LF +A + APSIIFIDEIDAI A R
Sbjct: 383 ESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSG 442
Query: 275 GMENR--MVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIP 332
G + R ++QLL M+ + TNRPD +D AL RPGRFD +I I P
Sbjct: 443 GNDERESTLNQLLVEMD----GFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKP 498
Query: 333 DESAREDILSVLTRGLLI--EGPIDLKKLARSTPGFAGADLVCLVKIAGKLA 382
D R+ I + + + + E ++LA TPGFAGAD+ + A +A
Sbjct: 499 DIKGRDQIFQIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIA 550
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 36/226 (15%)
Query: 565 FMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE-------------------- 604
F+ + G + + +VG VR LF AR CAP I+F+DE
Sbjct: 388 FLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGGNDER 447
Query: 605 ------LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKIL 658
LL E+DG V V+ TNRP+ +D+A+L+PGR + + + P + R +I
Sbjct: 448 ESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 507
Query: 659 KALARDTRLDAGVDLNVIGRMEACENMSGAELRALMGXXXXXXXXXXXXGTNTTRTIKTH 718
+ + +LD +GA++ + + T+
Sbjct: 508 QIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAAR------HEGATVTMA 561
Query: 719 HFDAAFSKISASKSDKIFNVNLRLSKVKYHTELVEANGDMLSSWQL 764
HFD+A ++ K N +SK++ T +G ++ W L
Sbjct: 562 HFDSAIDRVIGGLEKK----NRVISKLERRTVAYHESGHAVAGWFL 603
>AT3G16290.1 | Symbols: EMB2083 | AAA-type ATPase family protein |
chr3:5521187-5524995 REVERSE LENGTH=876
Length = 876
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 136/260 (52%), Gaps = 15/260 (5%)
Query: 157 RFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIAN 216
+F D G+ K+ L+ E++ H + +R G K G+LL GPPG GKT LA A+A
Sbjct: 408 KFTDVAGLGKIRLELE-EIVKFFTHGEMYRRRGVKIP-GGILLCGPPGVGKTLLAKAVAG 465
Query: 217 ETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKR---ENSQ 273
E + + ISA+ V G + +R L+ +A + APS++FIDE+DA+ +R + S
Sbjct: 466 EAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAVGRERGLIKGSG 525
Query: 274 HGMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPD 333
+ ++QLL ++ I +TNRPD +DPAL RPGRFD +I I P
Sbjct: 526 GQERDATLNQLLVSLD----GFEGRGEVITIASTNRPDILDPALVRPGRFDRKIFIPKPG 581
Query: 334 ESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLRIVDERYVM 393
R +IL V R + +D +A T G GA+L +V+IA + M+R D R
Sbjct: 582 LIGRMEILQVHARKKPMAEDLDYMAVASMTDGMVGAELANIVEIAA-INMMR--DGRT-- 636
Query: 394 REFLEDWLMESWSREERDKL 413
E D L+++ EER L
Sbjct: 637 -ELTTDDLLQAAQIEERGML 655
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 565 FMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDEL------------------- 605
F + + + YVG VR L+ AR AP ++F+DEL
Sbjct: 471 FFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAVGRERGLIKGSGGQERD 530
Query: 606 ------LTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILK 659
L LDG E R +V I +TNRP+ +D A+++PGR + +++P P R++IL+
Sbjct: 531 ATLNQLLVSLDGFEGRGEVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILQ 590
Query: 660 ALARDTRLDAGVDLNVIGRMEACENMSGAEL 690
AR + +D + M + M GAEL
Sbjct: 591 VHARKKPMAEDLDYMAVASM--TDGMVGAEL 619
>AT4G27680.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:13821263-13823083
FORWARD LENGTH=398
Length = 398
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 127/250 (50%), Gaps = 13/250 (5%)
Query: 142 ATSTVNEGEVEVKGKRFRDFGGMKKVLERLKREVLLPLCHPKEW---RMLGHKPEVSGVL 198
A +N ++V+ F GG++ + + L V+LPL P+ + ++LG + GVL
Sbjct: 70 ACDVINPDHIDVE---FGSIGGLETIKQALYELVILPLKRPELFAYGKLLGPQ---KGVL 123
Query: 199 LHGPPGCGKTELAHAIANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIF 258
L+GPPG GKT LA AIA E+ + + L+S G ++ + +FS AYK P+IIF
Sbjct: 124 LYGPPGTGKTMLAKAIAKESGAVFINVRVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIF 183
Query: 259 IDEIDAIASKRENSQHGMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALR 318
IDE+++ +R ++ H M ++ + + + ATNRP +D A+
Sbjct: 184 IDEVESFLGQRRSTDHEAMANMKTEFMALWD--GFSTDPHARVMVLAATNRPSELDEAIL 241
Query: 319 RPGRFDCEINIGIPDESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIA 378
R R IGIPD R +IL V +G +E ID +AR G+ G+D+ L K A
Sbjct: 242 R--RLPQAFEIGIPDRRERAEILKVTLKGERVEPDIDFDHIARLCEGYTGSDIFELCKKA 299
Query: 379 GKLAMLRIVD 388
+ I+D
Sbjct: 300 AYFPIREILD 309
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 30/152 (19%)
Query: 564 CFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDELLTELDGKEQRKD------ 617
F++++ L++K+ G+++ V +FS A P I+F+DE+ + L G+ + D
Sbjct: 146 VFINVRVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVESFL-GQRRSTDHEAMAN 204
Query: 618 -------------------VYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKIL 658
V V+ TNRP +D AIL+ RL + + P +R +IL
Sbjct: 205 MKTEFMALWDGFSTDPHARVMVLAATNRPSELDEAILR--RLPQAFEIGIPDRRERAEIL 262
Query: 659 KALARDTRLDAGVDLNVIGRMEACENMSGAEL 690
K + R++ +D + I R+ CE +G+++
Sbjct: 263 KVTLKGERVEPDIDFDHIARL--CEGYTGSDI 292
>AT1G02890.1 | Symbols: | AAA-type ATPase family protein |
chr1:645372-651797 REVERSE LENGTH=1246
Length = 1246
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 154/320 (48%), Gaps = 30/320 (9%)
Query: 127 TVTKNVEL--EMGNSRKAT-----STVNEGEVEVK-----------GKRFRDFGGMKKVL 168
++T ++L E+ N K+T V E E E K G F D G ++ V
Sbjct: 894 SITYGLQLLHEIQNENKSTKKSLKDVVTENEFEKKLLSDVIPPSDIGVSFSDIGALENVK 953
Query: 169 ERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANETRLPLYPISAT 228
+ LK V+LPL P+ + G+LL GPPG GKT LA A+A E IS +
Sbjct: 954 DTLKELVMLPLQRPELFGKGQLTKPTKGILLFGPPGTGKTMLAKAVATEAGANFINISMS 1013
Query: 229 ALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKREN-SQHGMENRMVSQLLTC 287
++ S G E ++ +FS A K APS+IF+DE+D++ +REN +H +M ++ +
Sbjct: 1014 SITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFM-- 1071
Query: 288 MNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESAREDILSVLTRG 347
+N + ATNRP +D A+ R R + + +PD + R ILSV+
Sbjct: 1072 INWDGLRTKDKERVLVLAATNRPFDLDEAVIR--RLPRRLMVNLPDSANRSKILSVILAK 1129
Query: 348 LLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLRIVD----ERYVMREFLEDWLME 403
+ +DL+ +A T G++G+DL L A L + I++ ER V + E+ M
Sbjct: 1130 EEMAEDVDLEAIANMTDGYSGSDLKNLCVTAAHLPIREILEKEKKERSVAQA--ENRAMP 1187
Query: 404 SWSREERDKLALKMSDFEEA 423
D L M+DF+ A
Sbjct: 1188 QL-YSSTDVRPLNMNDFKTA 1206
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 109/277 (39%), Gaps = 86/277 (31%)
Query: 442 VKWEDVGGLDSLRDEFEDFIIGRIKDPELYEELGPQLSERCMEERNSMGPKQLDERPSVC 501
V + D+G L++++D ++ ++ ++ PEL+ G QL +
Sbjct: 941 VSFSDIGALENVKDTLKELVMLPLQRPELF------------------GKGQLTK----- 977
Query: 502 RPLKLNPLEKVVHTGKLGLGDYHLRLLMCTIFCMEVSTEVAFFECAHQGCCALGPIILRL 561
P + ++ G G G T+ V+TE
Sbjct: 978 ------PTKGILLFGPPGTGK--------TMLAKAVATEAGA------------------ 1005
Query: 562 DFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDELLTELDGKEQ------- 614
F+++ + +K+ GE E V+ +FS A AP ++F+DE+ + L +E
Sbjct: 1006 --NFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAM 1063
Query: 615 ------------------RKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVK 656
++ V V+ TNRP +D A+++ RL + L V P +R K
Sbjct: 1064 RKMKNEFMINWDGLRTKDKERVLVLAATNRPFDLDEAVIR--RLPRRLMVNLPDSANRSK 1121
Query: 657 ILKALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
IL + + VDL I M + SG++L+ L
Sbjct: 1122 ILSVILAKEEMAEDVDLEAIANM--TDGYSGSDLKNL 1156
>AT2G29080.1 | Symbols: ftsh3 | FTSH protease 3 |
chr2:12489911-12492999 REVERSE LENGTH=809
Length = 809
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 120/231 (51%), Gaps = 13/231 (5%)
Query: 158 FRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHK-PEVSGVLLHGPPGCGKTELAHAIAN 216
F+D G + + + E + L +PK++ LG K P+ G LL GPPG GKT LA A A
Sbjct: 321 FKDVAGCDEAKQEI-MEFVHFLKNPKKYEDLGAKIPK--GALLVGPPGTGKTLLAKATAG 377
Query: 217 ETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHGM 276
E+ +P IS + + G + +R LF +A + APSIIFIDEIDAI R G
Sbjct: 378 ESGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRARGRGGLGG 437
Query: 277 ENR---MVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPD 333
+ ++QLL M+ + TNRPD +D AL RPGRFD +I I PD
Sbjct: 438 NDERESTLNQLLVEMD----GFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPD 493
Query: 334 ESAREDILSVLTRGLLI--EGPIDLKKLARSTPGFAGADLVCLVKIAGKLA 382
R+ I + + + + E ++LA TPGFAGAD+ + A +A
Sbjct: 494 IKGRDQIFKIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIA 544
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 25/129 (19%)
Query: 565 FMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDE-------------------- 604
F+ + G + + +VG VR LF AR AP I+F+DE
Sbjct: 383 FLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRARGRGGLGGNDERE 442
Query: 605 -----LLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILK 659
LL E+DG V V+ TNRP+ +D+A+L+PGR + + + P + R +I K
Sbjct: 443 STLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFK 502
Query: 660 ALARDTRLD 668
+ +LD
Sbjct: 503 IYLKKIKLD 511
>AT5G53540.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:21749561-21751099
REVERSE LENGTH=403
Length = 403
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 129/250 (51%), Gaps = 13/250 (5%)
Query: 142 ATSTVNEGEVEVKGKRFRDFGGMKKVLERLKREVLLPLCHPKEW---RMLGHKPEVSGVL 198
A +N ++V+ F GG++ + + L V+LPL P+ + ++LG + GVL
Sbjct: 73 ACDVINPLHIDVE---FGSIGGLESIKQALYELVILPLKRPELFAYGKLLGPQ---KGVL 126
Query: 199 LHGPPGCGKTELAHAIANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIF 258
L+GPPG GKT LA AIA E+ + + L+S G ++ + +FS AYK P+IIF
Sbjct: 127 LYGPPGTGKTMLAKAIARESEAVFINVKVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIF 186
Query: 259 IDEIDAIASKRENSQHGMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALR 318
IDE+D+ +R ++ + + M ++ + + + ATNRP +D A+
Sbjct: 187 IDEVDSFLGQRRSTDNEAMSNMKTEFMALWD--GFTTDQNARVMVLAATNRPSELDEAIL 244
Query: 319 RPGRFDCEINIGIPDESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIA 378
R RF IG+PD R IL V+ +G +E I+ ++AR + G+D+ L K A
Sbjct: 245 R--RFPQSFEIGMPDCQERAQILKVVLKGESVESDINYDRIARLCEDYTGSDIFELCKKA 302
Query: 379 GKLAMLRIVD 388
+ I++
Sbjct: 303 AYFPIREILE 312
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 28/154 (18%)
Query: 564 CFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDELLTEL-------------- 609
F++++ L++K+ G+++ V +FS A P I+F+DE+ + L
Sbjct: 149 VFINVKVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVDSFLGQRRSTDNEAMSNM 208
Query: 610 --------DG--KEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILK 659
DG +Q V V+ TNRP +D AIL+ R + + P ++R +ILK
Sbjct: 209 KTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RFPQSFEIGMPDCQERAQILK 266
Query: 660 ALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
+ + +++ ++ + I R+ CE+ +G+++ L
Sbjct: 267 VVLKGESVESDINYDRIARL--CEDYTGSDIFEL 298
>AT4G02480.1 | Symbols: | AAA-type ATPase family protein |
chr4:1082082-1088680 REVERSE LENGTH=1265
Length = 1265
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 120/234 (51%), Gaps = 5/234 (2%)
Query: 155 GKRFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAI 214
G F D G ++ V E LK V+LPL P+ + G+LL GPPG GKT LA A+
Sbjct: 959 GVSFDDIGALENVKETLKELVMLPLQRPELFDKGQLTKPTKGILLFGPPGTGKTMLAKAV 1018
Query: 215 ANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKREN-SQ 273
A E IS +++ S G E ++ +FS A K APS+IF+DE+D++ +REN +
Sbjct: 1019 ATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGE 1078
Query: 274 HGMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPD 333
H +M ++ + +N + ATNRP +D A+ R R + + +PD
Sbjct: 1079 HEAMRKMKNEFM--VNWDGLRTKDRERVLVLAATNRPFDLDEAVIR--RLPRRLMVNLPD 1134
Query: 334 ESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLRIV 387
+ R ILSV+ I +DL+ +A T G++G+DL L A + I+
Sbjct: 1135 ATNRSKILSVILAKEEIAPDVDLEAIANMTDGYSGSDLKNLCVTAAHFPIREIL 1188
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 29/154 (18%)
Query: 565 FMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDEL------------------- 605
F+++ + +K+ GE E V+ +FS A AP ++F+DE+
Sbjct: 1026 FINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKM 1085
Query: 606 ----LTELDG--KEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILK 659
+ DG + R+ V V+ TNRP +D A+++ RL + L V P +R KIL
Sbjct: 1086 KNEFMVNWDGLRTKDRERVLVLAATNRPFDLDEAVIR--RLPRRLMVNLPDATNRSKILS 1143
Query: 660 ALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
+ + VDL I M + SG++L+ L
Sbjct: 1144 VILAKEEIAPDVDLEAIANM--TDGYSGSDLKNL 1175
>AT4G28000.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:13925456-13929280
FORWARD LENGTH=830
Length = 830
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 140/271 (51%), Gaps = 14/271 (5%)
Query: 155 GKRFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAI 214
G F D G + + E L+ V+LPL P ++ KP G+LL GPPG GKT +A AI
Sbjct: 514 GVTFADIGSLDETKESLQELVMLPLRRPDLFKGGLLKP-CRGILLFGPPGTGKTMMAKAI 572
Query: 215 ANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKREN-SQ 273
ANE +S + + S G E N+R LF+ A K +P+IIF+DE+D++ +R +
Sbjct: 573 ANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGE 632
Query: 274 HGMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPD 333
H ++ ++ +T + + ATNRP +D A+ R RF+ I +G+P
Sbjct: 633 HEAMRKIKNEFMTHWD--GLMSNAGDRILVLAATNRPFDLDEAIIR--RFERRIMVGLPS 688
Query: 334 ESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLRIVDERYVM 393
+RE IL L E +D ++LA+ T G++G+DL A R V E +
Sbjct: 689 VESREKILRTLLSKEKTEN-LDFQELAQMTDGYSGSDLKNFCTTAA----YRPVRE-LIK 742
Query: 394 REFLEDWLMESWSREERDKLALKMSDFEEAI 424
+E L+D E REE +K + + S+ +E +
Sbjct: 743 QECLKD--QERRKREEAEKNSEEGSEAKEEV 771
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 30/152 (19%)
Query: 565 FMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDEL------------------- 605
F+++ + +K+ GE E VR LF+ A +P I+F+DE+
Sbjct: 580 FINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKI 639
Query: 606 ----LTELDG--KEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILK 659
+T DG + V+ TNRP +D AI++ R + + V PS E R KIL+
Sbjct: 640 KNEFMTHWDGLMSNAGDRILVLAATNRPFDLDEAIIR--RFERRIMVGLPSVESREKILR 697
Query: 660 ALARDTRLDAGVDLNVIGRMEACENMSGAELR 691
L + + +D + +M + SG++L+
Sbjct: 698 TLLSKEKTE-NLDFQELAQM--TDGYSGSDLK 726
>AT1G64110.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801255
REVERSE LENGTH=827
Length = 827
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 115/227 (50%), Gaps = 14/227 (6%)
Query: 158 FRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANE 217
F+D G + ++ E L+ V+LPL P + KP G+LL GPPG GKT LA AIA E
Sbjct: 518 FKDIGALDEIKESLQELVMLPLRRPDLFTGGLLKP-CRGILLFGPPGTGKTMLAKAIAKE 576
Query: 218 TRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKR-----ENS 272
+S + + S G E N+R LF+ A K +P+IIF+DE+D++ +R +
Sbjct: 577 AGASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSMLGQRTRVGEHEA 636
Query: 273 QHGMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIP 332
++N +S M + + ATNRP +D A+ R RF+ I +G+P
Sbjct: 637 MRKIKNEFMSHWDGLMTK------PGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 688
Query: 333 DESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAG 379
RE IL L ++ +D K+LA T G+ G+DL L A
Sbjct: 689 AVENREKILRTLLAKEKVDENLDYKELAMMTEGYTGSDLKNLCTTAA 735
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 29/155 (18%)
Query: 564 CFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDEL------------------ 605
F+++ + +K+ GE E VR LF+ A +P I+F+DE+
Sbjct: 580 SFINVSMSTITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSMLGQRTRVGEHEAMRK 639
Query: 606 -----LTELDGKEQR--KDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKIL 658
++ DG + + + V+ TNRP +D AI++ R + + V P+ E+R KIL
Sbjct: 640 IKNEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPAVENREKIL 697
Query: 659 KALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
+ L ++D +D + M E +G++L+ L
Sbjct: 698 RTLLAKEKVDENLDYKELAMM--TEGYTGSDLKNL 730
>AT1G64110.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801255
REVERSE LENGTH=829
Length = 829
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 115/227 (50%), Gaps = 14/227 (6%)
Query: 158 FRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANE 217
F+D G + ++ E L+ V+LPL P + KP G+LL GPPG GKT LA AIA E
Sbjct: 520 FKDIGALDEIKESLQELVMLPLRRPDLFTGGLLKP-CRGILLFGPPGTGKTMLAKAIAKE 578
Query: 218 TRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKR-----ENS 272
+S + + S G E N+R LF+ A K +P+IIF+DE+D++ +R +
Sbjct: 579 AGASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSMLGQRTRVGEHEA 638
Query: 273 QHGMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIP 332
++N +S M + + ATNRP +D A+ R RF+ I +G+P
Sbjct: 639 MRKIKNEFMSHWDGLMTK------PGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 690
Query: 333 DESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAG 379
RE IL L ++ +D K+LA T G+ G+DL L A
Sbjct: 691 AVENREKILRTLLAKEKVDENLDYKELAMMTEGYTGSDLKNLCTTAA 737
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 29/155 (18%)
Query: 564 CFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDEL------------------ 605
F+++ + +K+ GE E VR LF+ A +P I+F+DE+
Sbjct: 582 SFINVSMSTITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSMLGQRTRVGEHEAMRK 641
Query: 606 -----LTELDGKEQR--KDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKIL 658
++ DG + + + V+ TNRP +D AI++ R + + V P+ E+R KIL
Sbjct: 642 IKNEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPAVENREKIL 699
Query: 659 KALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
+ L ++D +D + M E +G++L+ L
Sbjct: 700 RTLLAKEKVDENLDYKELAMM--TEGYTGSDLKNL 732
>AT1G64110.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801240
REVERSE LENGTH=824
Length = 824
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 115/227 (50%), Gaps = 14/227 (6%)
Query: 158 FRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANE 217
F+D G + ++ E L+ V+LPL P + KP G+LL GPPG GKT LA AIA E
Sbjct: 515 FKDIGALDEIKESLQELVMLPLRRPDLFTGGLLKP-CRGILLFGPPGTGKTMLAKAIAKE 573
Query: 218 TRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKR-----ENS 272
+S + + S G E N+R LF+ A K +P+IIF+DE+D++ +R +
Sbjct: 574 AGASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSMLGQRTRVGEHEA 633
Query: 273 QHGMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIP 332
++N +S M + + ATNRP +D A+ R RF+ I +G+P
Sbjct: 634 MRKIKNEFMSHWDGLMTK------PGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 685
Query: 333 DESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAG 379
RE IL L ++ +D K+LA T G+ G+DL L A
Sbjct: 686 AVENREKILRTLLAKEKVDENLDYKELAMMTEGYTGSDLKNLCTTAA 732
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 29/155 (18%)
Query: 564 CFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDEL------------------ 605
F+++ + +K+ GE E VR LF+ A +P I+F+DE+
Sbjct: 577 SFINVSMSTITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSMLGQRTRVGEHEAMRK 636
Query: 606 -----LTELDGKEQR--KDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKIL 658
++ DG + + + V+ TNRP +D AI++ R + + V P+ E+R KIL
Sbjct: 637 IKNEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPAVENREKIL 694
Query: 659 KALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
+ L ++D +D + M E +G++L+ L
Sbjct: 695 RTLLAKEKVDENLDYKELAMM--TEGYTGSDLKNL 727
>AT1G50140.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:18569921-18578663
REVERSE LENGTH=981
Length = 981
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 104 SVPRDS-ERGLVRL-KTNLRELYKGTVTKNVELEMGNSRKATSTVNEGEVEVKGKRFRDF 161
S+PR+S E + RL K L KN+ + ++ V GE+ VK F D
Sbjct: 638 SLPRESLEISIARLRKLEDNSLKPSQNLKNIAKDEYERNFVSAVVAPGEIGVK---FEDI 694
Query: 162 GGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANETRLP 221
G ++ V + L V+LP+ P+ + G+LL GPPG GKT LA A+A E
Sbjct: 695 GALEDVKKALNELVILPMRRPELFARGNLLRPCKGILLFGPPGTGKTLLAKALATEAGAN 754
Query: 222 LYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKR-ENSQHGMENRM 280
I+ + L S G +E + LFS A K AP IIF+DEID++ R +S+H RM
Sbjct: 755 FISITGSTLTSKWFGDAEKLTKALFSFATKLAPVIIFVDEIDSLLGARGGSSEHEATRRM 814
Query: 281 VSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESAREDI 340
++ + + +GATNRP +D A+ R R I + +PD R I
Sbjct: 815 RNEFMAAWD--GLRSKDSQRILILGATNRPFDLDDAVIR--RLPRRIYVDLPDAENRLKI 870
Query: 341 LSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCL 374
L + +E +KLA+ T G++G+DL L
Sbjct: 871 LKIFLTPENLESDFQFEKLAKETEGYSGSDLKNL 904
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 110/277 (39%), Gaps = 86/277 (31%)
Query: 442 VKWEDVGGLDSLRDEFEDFIIGRIKDPELYEELGPQLSERCMEERNSMGPKQLDERPSVC 501
VK+ED+G L+ ++ + +I ++ PEL+ R ++
Sbjct: 689 VKFEDIGALEDVKKALNELVILPMRRPELFA------------------------RGNLL 724
Query: 502 RPLKLNPLEKVVHTGKLGLGDYHLRLLMCTIFCMEVSTEVAFFECAHQGCCALGPIILRL 561
RP K ++ G G G T+ ++TE
Sbjct: 725 RPCK-----GILLFGPPGTGK--------TLLAKALATEAGA------------------ 753
Query: 562 DFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDEL---------------- 605
F+ + G L +K+ G++E + LFS A AP I+F+DE+
Sbjct: 754 --NFISITGSTLTSKWFGDAEKLTKALFSFATKLAPVIIFVDEIDSLLGARGGSSEHEAT 811
Query: 606 -------LTELDG--KEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVK 656
+ DG + + + ++G TNRP +D A+++ RL + +YV P E+R+K
Sbjct: 812 RRMRNEFMAAWDGLRSKDSQRILILGATNRPFDLDDAVIR--RLPRRIYVDLPDAENRLK 869
Query: 657 ILKALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
ILK L++ + + E SG++L+ L
Sbjct: 870 ILKIFLTPENLESDFQFEKLAK--ETEGYSGSDLKNL 904
>AT1G50140.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:18569921-18578663
REVERSE LENGTH=1003
Length = 1003
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 104 SVPRDS-ERGLVRL-KTNLRELYKGTVTKNVELEMGNSRKATSTVNEGEVEVKGKRFRDF 161
S+PR+S E + RL K L KN+ + ++ V GE+ VK F D
Sbjct: 660 SLPRESLEISIARLRKLEDNSLKPSQNLKNIAKDEYERNFVSAVVAPGEIGVK---FEDI 716
Query: 162 GGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANETRLP 221
G ++ V + L V+LP+ P+ + G+LL GPPG GKT LA A+A E
Sbjct: 717 GALEDVKKALNELVILPMRRPELFARGNLLRPCKGILLFGPPGTGKTLLAKALATEAGAN 776
Query: 222 LYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKR-ENSQHGMENRM 280
I+ + L S G +E + LFS A K AP IIF+DEID++ R +S+H RM
Sbjct: 777 FISITGSTLTSKWFGDAEKLTKALFSFATKLAPVIIFVDEIDSLLGARGGSSEHEATRRM 836
Query: 281 VSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESAREDI 340
++ + + +GATNRP +D A+ R R I + +PD R I
Sbjct: 837 RNEFMAAWD--GLRSKDSQRILILGATNRPFDLDDAVIR--RLPRRIYVDLPDAENRLKI 892
Query: 341 LSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCL 374
L + +E +KLA+ T G++G+DL L
Sbjct: 893 LKIFLTPENLESDFQFEKLAKETEGYSGSDLKNL 926
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 29/154 (18%)
Query: 565 FMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDEL------------------- 605
F+ + G L +K+ G++E + LFS A AP I+F+DE+
Sbjct: 777 FISITGSTLTSKWFGDAEKLTKALFSFATKLAPVIIFVDEIDSLLGARGGSSEHEATRRM 836
Query: 606 ----LTELDG--KEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILK 659
+ DG + + + ++G TNRP +D A+++ RL + +YV P E+R+KILK
Sbjct: 837 RNEFMAAWDGLRSKDSQRILILGATNRPFDLDDAVIR--RLPRRIYVDLPDAENRLKILK 894
Query: 660 ALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
L++ + + E SG++L+ L
Sbjct: 895 IFLTPENLESDFQFEKLAK--ETEGYSGSDLKNL 926
>AT5G52882.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:21434155-21438362
REVERSE LENGTH=829
Length = 829
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 117/226 (51%), Gaps = 7/226 (3%)
Query: 155 GKRFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAI 214
G F D G + + + L+ V+LPL P ++ KP G+LL GPPG GKT LA AI
Sbjct: 513 GVTFADIGSLDETKDSLQELVMLPLRRPDLFQGGLLKP-CRGILLFGPPGTGKTMLAKAI 571
Query: 215 ANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKREN-SQ 273
ANE +S + + S G E N+R LF+ A K +P+IIF+DE+D++ +R +
Sbjct: 572 ANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGE 631
Query: 274 HGMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPD 333
H ++ ++ +T + + ATNRP +D A+ R RF+ I +G+P
Sbjct: 632 HEAMRKIKNEFMTHWD--GLMTKPGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPS 687
Query: 334 ESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAG 379
+RE IL L E +D +L + T G++G+DL L A
Sbjct: 688 IESREKILRTLLSKEKTEN-LDFHELGQITEGYSGSDLKNLCITAA 732
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 30/155 (19%)
Query: 564 CFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDEL------------------ 605
F+++ + +K+ GE E VR LF+ A +P I+F+DE+
Sbjct: 578 SFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRK 637
Query: 606 -----LTELDGKEQR--KDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKIL 658
+T DG + + + V+ TNRP +D AI++ R + + V PS E R KIL
Sbjct: 638 IKNEFMTHWDGLMTKPGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPSIESREKIL 695
Query: 659 KALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
+ L + + +D + +G++ E SG++L+ L
Sbjct: 696 RTLLSKEKTE-NLDFHELGQI--TEGYSGSDLKNL 727
>AT3G19740.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6855944-6862930
REVERSE LENGTH=993
Length = 993
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 161/350 (46%), Gaps = 24/350 (6%)
Query: 105 VPRDS-ERGLVRLKTNLRELYKGTVT-KNVELEMGNSRKATSTVNEGEVEVKGKRFRDFG 162
+PR+S E + RLK K T KN+ + + ++ V GE+ VK F D G
Sbjct: 651 LPRESIEISVKRLKAQEDISRKPTQNLKNIAKDEFETNFVSAVVAPGEIGVK---FDDIG 707
Query: 163 GMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANETRLPL 222
++ V + L V+LP+ P+ + G+LL GPPG GKT LA A+A E
Sbjct: 708 ALEHVKKTLNELVILPMRRPELFTRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANF 767
Query: 223 YPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENS-QHGMENRMV 281
I+ + L S G +E + LFS A K AP IIF+DE+D++ R + +H RM
Sbjct: 768 ISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMR 827
Query: 282 SQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESAREDIL 341
++ + + +GATNRP +D A+ R R I + +PD R IL
Sbjct: 828 NEFMAAWD--GLRSKDSQRILILGATNRPFDLDDAVIR--RLPRRIYVDLPDAENRLKIL 883
Query: 342 SVLTRGLLIEGPIDLKKLARSTPGFAGADL--VCLVKIAGKLAMLRIVDERYVMREFLED 399
+ +E + KLA+ T G++G+DL +C+ A R V +E L++
Sbjct: 884 KIFLTPENLETGFEFDKLAKETEGYSGSDLKNLCIA------AAYRPV------QELLQE 931
Query: 400 WLMESWSREERDKLALKMSDFEEAIKVVQPSTRREGFSSIPNVKWEDVGG 449
+S + D L + DF ++ V PS + + KW + G
Sbjct: 932 ENKDSVTNASPDLRPLSLDDFIQSKAKVSPSVAYDATTMNELRKWNEQYG 981
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 29/154 (18%)
Query: 565 FMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDEL------------------- 605
F+ + G L +K+ G++E + LFS A AP I+F+DE+
Sbjct: 767 FISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRM 826
Query: 606 ----LTELDG--KEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILK 659
+ DG + + + ++G TNRP +D A+++ RL + +YV P E+R+KILK
Sbjct: 827 RNEFMAAWDGLRSKDSQRILILGATNRPFDLDDAVIR--RLPRRIYVDLPDAENRLKILK 884
Query: 660 ALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
L+ G + + + + E SG++L+ L
Sbjct: 885 IFLTPENLETGFEFDKLAK--ETEGYSGSDLKNL 916
>AT2G27600.1 | Symbols: SKD1, VPS4, ATSKD1 | AAA-type ATPase family
protein | chr2:11781226-11783730 FORWARD LENGTH=435
Length = 435
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 118/224 (52%), Gaps = 13/224 (5%)
Query: 157 RFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIAN 216
++ D G++ + L+ V+LP+ P+ G + LL+GPPG GK+ LA A+A
Sbjct: 130 KWSDVAGLESAKQALQEAVILPVKFPQ--FFTGKRRPWRAFLLYGPPGTGKSYLAKAVAT 187
Query: 217 ETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKR-ENSQHG 275
E + +S++ LVS G SE + +LF A ++APSIIF+DEID++ R E ++
Sbjct: 188 EADSTFFSVSSSDLVSKWMGESEKLVSNLFEMARESAPSIIFVDEIDSLCGTRGEGNESE 247
Query: 276 MENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDES 335
R+ ++LL M + ATN P A+D A+RR RFD I I +P+
Sbjct: 248 ASRRIKTELLVQMQ---GVGHNDEKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPEAK 302
Query: 336 AREDILSVL---TRGLLIEGPIDLKKLARSTPGFAGADLVCLVK 376
AR+ + V T L E D + L + T GF+G+D+ VK
Sbjct: 303 ARQHMFKVHLGDTPHNLTEP--DFEYLGQKTEGFSGSDVSVCVK 344
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 103/276 (37%), Gaps = 88/276 (31%)
Query: 440 PNVKWEDVGGLDSLRDEFEDFIIGRIKDPELYEELGPQLSERCMEERNSMGPKQLDERPS 499
PN+KW DV GL+S + ++ +I +K P+ +
Sbjct: 127 PNIKWSDVAGLESAKQALQEAVILPVKFPQFFTG-------------------------- 160
Query: 500 VCRPLKLNPLEKVVHTGKLGLGDYHLRLLMCTIFCMEVSTEVAFFECAHQGCCALGPIIL 559
K P + G G G +L V+TE
Sbjct: 161 -----KRRPWRAFLLYGPPGTGKSYL--------AKAVATEA------------------ 189
Query: 560 RLDFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLD---------------- 603
D F + +L++K++GESE V LF AR AP I+F+D
Sbjct: 190 --DSTFFSVSSSDLVSKWMGESEKLVSNLFEMARESAPSIIFVDEIDSLCGTRGEGNESE 247
Query: 604 -------ELLTELDG-KEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRV 655
ELL ++ G + V V+ TN P A+D+AI + R K +Y+P P + R
Sbjct: 248 ASRRIKTELLVQMQGVGHNDEKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPEAKARQ 305
Query: 656 KILKALARDTRLD-AGVDLNVIGRMEACENMSGAEL 690
+ K DT + D +G + E SG+++
Sbjct: 306 HMFKVHLGDTPHNLTEPDFEYLG--QKTEGFSGSDV 339
>AT3G27120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:10000248-10003265
REVERSE LENGTH=476
Length = 476
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 145/304 (47%), Gaps = 31/304 (10%)
Query: 157 RFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIAN 216
R+ D G++ + + V+ PL P ++ G + G+LL GPPG GKT + AIA
Sbjct: 197 RWDDIAGLEHAKKCVTEMVIWPLLRPDIFK--GCRSPGKGLLLFGPPGTGKTMIGKAIAG 254
Query: 217 ETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRE-NSQHG 275
E + + ISA++L S G E +R LF A P++IF+DEID++ S+R+ + +H
Sbjct: 255 EAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSDGEHE 314
Query: 276 MENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDES 335
R+ +Q L M IGATNRP +D A RR R + I +P
Sbjct: 315 SSRRLKTQFLIEM---EGFDSGSEQILLIGATNRPQELDEAARR--RLTKRLYIPLPSSE 369
Query: 336 AREDILSVLTR--GLLIEGPIDLKKLARSTPGFAGADLVCLVKIA--GKL--AMLRIVDE 389
AR I+ L + GL D+ + T G++G+D+ LVK A G L A+ R +D
Sbjct: 370 ARAWIIQNLLKKDGLFTLSDDDMNIICNLTEGYSGSDMKNLVKDATMGPLREALKRGIDI 429
Query: 390 RYVMREFLEDWLMESWSREERDKLALKMSDFEEAIKVVQPSTRREGFSSIPNVKWEDVGG 449
+ ++ D + + DF++A++ V+PS + N W + G
Sbjct: 430 TNLTKD---------------DMRLVTLQDFKDALQEVRPSVSQNELGIYEN--WNNQFG 472
Query: 450 LDSL 453
SL
Sbjct: 473 SLSL 476
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 30/156 (19%)
Query: 565 FMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDEL------------------- 605
F + L +K++GE E VR LF A P ++F+DE+
Sbjct: 260 FFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSDGEHESSRRL 319
Query: 606 ----LTELDGKEQ-RKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILKA 660
L E++G + + + +IG TNRP+ +D A + RL K LY+P PS E R I++
Sbjct: 320 KTQFLIEMEGFDSGSEQILLIGATNRPQELDEAARR--RLTKRLYIPLPSSEARAWIIQN 377
Query: 661 LARDTRLD--AGVDLNVIGRMEACENMSGAELRALM 694
L + L + D+N+I + E SG++++ L+
Sbjct: 378 LLKKDGLFTLSDDDMNIICNL--TEGYSGSDMKNLV 411
>AT4G24860.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:12801580-12808190
REVERSE LENGTH=1122
Length = 1122
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 122/233 (52%), Gaps = 5/233 (2%)
Query: 158 FRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANE 217
F D G ++KV + LK V+LPL P+ + G+LL GPPG GKT LA A+A E
Sbjct: 819 FDDIGALEKVKDILKELVMLPLQRPELFCKGELTKPCKGILLFGPPGTGKTMLAKAVAKE 878
Query: 218 TRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENS-QHGM 276
IS +++ S G E ++ +FS A K +PS+IF+DE+D++ +RE+ +H
Sbjct: 879 ADANFINISMSSITSKWFGEGEKYVKAVFSLASKMSPSVIFVDEVDSMLGRREHPREHEA 938
Query: 277 ENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESA 336
++ ++ + M+ + ATNRP +D A+ R R + +G+PD S
Sbjct: 939 SRKIKNEFM--MHWDGLTTQERERVLVLAATNRPFDLDEAVIR--RLPRRLMVGLPDTSN 994
Query: 337 REDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLRIVDE 389
R IL V+ + +D+ ++A T G++G+DL L A + I+++
Sbjct: 995 RAFILKVILAKEDLSPDLDIGEIASMTNGYSGSDLKNLCVTAAHRPIKEILEK 1047
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 29/157 (18%)
Query: 562 DFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLD------------------ 603
D F+++ + +K+ GE E V+ +FS A +P ++F+D
Sbjct: 880 DANFINISMSSITSKWFGEGEKYVKAVFSLASKMSPSVIFVDEVDSMLGRREHPREHEAS 939
Query: 604 -----ELLTELDG--KEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVK 656
E + DG ++R+ V V+ TNRP +D A+++ RL + L V P +R
Sbjct: 940 RKIKNEFMMHWDGLTTQERERVLVLAATNRPFDLDEAVIR--RLPRRLMVGLPDTSNRAF 997
Query: 657 ILKALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
ILK + L +D+ I M SG++L+ L
Sbjct: 998 ILKVILAKEDLSPDLDIGEIASM--TNGYSGSDLKNL 1032
>AT2G34560.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14560266-14562695
FORWARD LENGTH=393
Length = 393
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 117/234 (50%), Gaps = 10/234 (4%)
Query: 157 RFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIAN 216
++ G++ + LK V++P+ +P + G G+LL GPPG GKT LA A+A
Sbjct: 110 KWESIKGLENAKKLLKEAVVMPIKYPTYFN--GLLTPWKGILLFGPPGTGKTMLAKAVAT 167
Query: 217 ETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKREN---SQ 273
E + ISA+++VS G SE IR LF A APS IF+DEIDAI S+R S+
Sbjct: 168 ECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDEIDAIISQRGGEGRSE 227
Query: 274 HGMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPD 333
H R+ ++LL M+ + ATN P +D A+ R R + I + +PD
Sbjct: 228 HEASRRLKTELLIQMD---GLQKTNELVFVLAATNLPWELDAAMLR--RLEKRILVPLPD 282
Query: 334 ESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLRIV 387
AR + +L + P+ L + G++G+D+ L K A + R +
Sbjct: 283 PEARRGMFEMLIPSQPGDEPLPHDVLVEKSEGYSGSDIRILCKEAAMQPLRRTL 336
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 120/301 (39%), Gaps = 90/301 (29%)
Query: 420 FEEA-IKVVQPSTRREGFSSIPNVKWEDVGGLDSLRDEFEDFIIGRIKDPELYEELGPQL 478
FE A + + S R+ PN+KWE + GL++ + ++ ++ IK P + L
Sbjct: 86 FESAETRTLAESLSRDIIRGNPNIKWESIKGLENAKKLLKEAVVMPIKYPTYFNGL---- 141
Query: 479 SERCMEERNSMGPKQLDERPSVCRPLKLNPLEKVVHTGKLGLGDYHLRLLMCTIFCMEVS 538
L P + ++ G G G T+ V+
Sbjct: 142 ---------------------------LTPWKGILLFGPPGTGK--------TMLAKAVA 166
Query: 539 TEVAFFECAHQGCCALGPIILRLDFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPC 598
TE C + F ++ +++K+ G+SE +R LF AR AP
Sbjct: 167 TE-----------C---------NTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPS 206
Query: 599 ILFLD-------------------------ELLTELDGKEQRKD-VYVIGTTNRPEAVDR 632
+FLD ELL ++DG ++ + V+V+ TN P +D
Sbjct: 207 TIFLDEIDAIISQRGGEGRSEHEASRRLKTELLIQMDGLQKTNELVFVLAATNLPWELDA 266
Query: 633 AILQPGRLGKHLYVPHPSPEDRVKILKALARDTRLDAGVDLNVIGRMEACENMSGAELRA 692
A+L+ RL K + VP P PE R + + L D + +V+ +E E SG+++R
Sbjct: 267 AMLR--RLEKRILVPLPDPEARRGMFEMLIPSQPGDEPLPHDVL--VEKSEGYSGSDIRI 322
Query: 693 L 693
L
Sbjct: 323 L 323
>AT1G79560.1 | Symbols: EMB156, EMB36, EMB1047, FTSH12 | FTSH
protease 12 | chr1:29926976-29932308 FORWARD LENGTH=1008
Length = 1008
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 100/194 (51%), Gaps = 5/194 (2%)
Query: 194 VSGVLLHGPPGCGKTELAHAIANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTA 253
V GVLL GPPG GKT A +A E+ LP + ++ A + S A I ++FS A + A
Sbjct: 526 VRGVLLSGPPGTGKTLFARTLAKESGLP-FVFASGAEFTDSEKSGAAKINEMFSIARRNA 584
Query: 254 PSIIFIDEIDAIA---SKRENSQHGMENRMVSQLLTCMNQX-XXXXXXXXXXXXIGATNR 309
P+ +F+DEIDAIA ++++ + +++QL + I ATNR
Sbjct: 585 PAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATNR 644
Query: 310 PDAVDPALRRPGRFDCEINIGIPDESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGA 369
PD +D R GR D + IG+PD R I V + G + ID KL T GF+GA
Sbjct: 645 PDELDLEFVRSGRIDRRLYIGLPDAKQRVQIFGVHSAGKNLAEDIDFGKLVFRTVGFSGA 704
Query: 370 DLVCLVKIAGKLAM 383
D+ LV A +++
Sbjct: 705 DIRNLVNEAAIMSV 718
>AT2G34560.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14560266-14562695
FORWARD LENGTH=384
Length = 384
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 117/234 (50%), Gaps = 10/234 (4%)
Query: 157 RFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIAN 216
++ G++ + LK V++P+ +P + G G+LL GPPG GKT LA A+A
Sbjct: 101 KWESIKGLENAKKLLKEAVVMPIKYPTYFN--GLLTPWKGILLFGPPGTGKTMLAKAVAT 158
Query: 217 ETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKREN---SQ 273
E + ISA+++VS G SE IR LF A APS IF+DEIDAI S+R S+
Sbjct: 159 ECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDEIDAIISQRGGEGRSE 218
Query: 274 HGMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPD 333
H R+ ++LL M+ + ATN P +D A+ R R + I + +PD
Sbjct: 219 HEASRRLKTELLIQMD---GLQKTNELVFVLAATNLPWELDAAMLR--RLEKRILVPLPD 273
Query: 334 ESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLRIV 387
AR + +L + P+ L + G++G+D+ L K A + R +
Sbjct: 274 PEARRGMFEMLIPSQPGDEPLPHDVLVEKSEGYSGSDIRILCKEAAMQPLRRTL 327
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 120/301 (39%), Gaps = 90/301 (29%)
Query: 420 FEEA-IKVVQPSTRREGFSSIPNVKWEDVGGLDSLRDEFEDFIIGRIKDPELYEELGPQL 478
FE A + + S R+ PN+KWE + GL++ + ++ ++ IK P + L
Sbjct: 77 FESAETRTLAESLSRDIIRGNPNIKWESIKGLENAKKLLKEAVVMPIKYPTYFNGL---- 132
Query: 479 SERCMEERNSMGPKQLDERPSVCRPLKLNPLEKVVHTGKLGLGDYHLRLLMCTIFCMEVS 538
L P + ++ G G G T+ V+
Sbjct: 133 ---------------------------LTPWKGILLFGPPGTGK--------TMLAKAVA 157
Query: 539 TEVAFFECAHQGCCALGPIILRLDFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPC 598
TE C + F ++ +++K+ G+SE +R LF AR AP
Sbjct: 158 TE-----------C---------NTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPS 197
Query: 599 ILFLD-------------------------ELLTELDGKEQRKD-VYVIGTTNRPEAVDR 632
+FLD ELL ++DG ++ + V+V+ TN P +D
Sbjct: 198 TIFLDEIDAIISQRGGEGRSEHEASRRLKTELLIQMDGLQKTNELVFVLAATNLPWELDA 257
Query: 633 AILQPGRLGKHLYVPHPSPEDRVKILKALARDTRLDAGVDLNVIGRMEACENMSGAELRA 692
A+L+ RL K + VP P PE R + + L D + +V+ +E E SG+++R
Sbjct: 258 AMLR--RLEKRILVPLPDPEARRGMFEMLIPSQPGDEPLPHDVL--VEKSEGYSGSDIRI 313
Query: 693 L 693
L
Sbjct: 314 L 314
>AT2G45500.1 | Symbols: | AAA-type ATPase family protein |
chr2:18749973-18752636 REVERSE LENGTH=491
Length = 491
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 144/294 (48%), Gaps = 33/294 (11%)
Query: 157 RFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIAN 216
++ D G+ + L V+LP + G + G+LL GPPG GKT LA A+A+
Sbjct: 218 KWDDVAGLNGAKQALLEMVILP--AKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVAS 275
Query: 217 ETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHGM 276
E++ + +SA++L S G +E ++ LF A PS+IF+DEID+I S R S++
Sbjct: 276 ESQATFFNVSASSLTSKWVGEAEKLVKTLFQVAISRQPSVIFMDEIDSIMSTRSTSENEA 335
Query: 277 ENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESA 336
R+ S+ L + IGATN+P +D A+ R R I + +PD +
Sbjct: 336 SRRLKSEFLIQFD--GVTSNPDDLVIIIGATNKPQELDDAVLR--RLVKRIYVPLPDSNV 391
Query: 337 REDILSVLTR---GLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLRIVDERYVM 393
R+ + + L +G ID K+ + T G++G+DL L + A AM+ I
Sbjct: 392 RKLLFKTKLKCQPHSLSDGDID--KIVKETEGYSGSDLQALCEEA---AMMPI------- 439
Query: 394 REFLEDWLMESWSREERDKLALKMSDFEEAIKVVQPSTRREGFSSIPNVKWEDV 447
RE + L + + +L+ DF +++ V++PS + KWE++
Sbjct: 440 RELGANIL----TIQANKVRSLRYDDFRKSMAVIRPSLSKS--------KWEEL 481
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 27/154 (17%)
Query: 564 CFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDEL------------------ 605
F ++ L +K+VGE+E V+TLF A + P ++F+DE+
Sbjct: 280 TFFNVSASSLTSKWVGEAEKLVKTLFQVAISRQPSVIFMDEIDSIMSTRSTSENEASRRL 339
Query: 606 ----LTELDGKEQRKD--VYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILK 659
L + DG D V +IG TN+P+ +D A+L+ RL K +YVP P R K+L
Sbjct: 340 KSEFLIQFDGVTSNPDDLVIIIGATNKPQELDDAVLR--RLVKRIYVPLPDSNVR-KLLF 396
Query: 660 ALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
+ + D ++ ++ E SG++L+AL
Sbjct: 397 KTKLKCQPHSLSDGDIDKIVKETEGYSGSDLQAL 430
>AT2G45500.2 | Symbols: | AAA-type ATPase family protein |
chr2:18749973-18752636 REVERSE LENGTH=487
Length = 487
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 144/294 (48%), Gaps = 33/294 (11%)
Query: 157 RFRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIAN 216
++ D G+ + L V+LP + G + G+LL GPPG GKT LA A+A+
Sbjct: 214 KWDDVAGLNGAKQALLEMVILP--AKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVAS 271
Query: 217 ETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHGM 276
E++ + +SA++L S G +E ++ LF A PS+IF+DEID+I S R S++
Sbjct: 272 ESQATFFNVSASSLTSKWVGEAEKLVKTLFQVAISRQPSVIFMDEIDSIMSTRSTSENEA 331
Query: 277 ENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESA 336
R+ S+ L + IGATN+P +D A+ R R I + +PD +
Sbjct: 332 SRRLKSEFLIQFD--GVTSNPDDLVIIIGATNKPQELDDAVLR--RLVKRIYVPLPDSNV 387
Query: 337 REDILSVLTR---GLLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLRIVDERYVM 393
R+ + + L +G ID K+ + T G++G+DL L + A AM+ I
Sbjct: 388 RKLLFKTKLKCQPHSLSDGDID--KIVKETEGYSGSDLQALCEEA---AMMPI------- 435
Query: 394 REFLEDWLMESWSREERDKLALKMSDFEEAIKVVQPSTRREGFSSIPNVKWEDV 447
RE + L + + +L+ DF +++ V++PS + KWE++
Sbjct: 436 RELGANIL----TIQANKVRSLRYDDFRKSMAVIRPSLSKS--------KWEEL 477
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 27/154 (17%)
Query: 564 CFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCILFLDEL------------------ 605
F ++ L +K+VGE+E V+TLF A + P ++F+DE+
Sbjct: 276 TFFNVSASSLTSKWVGEAEKLVKTLFQVAISRQPSVIFMDEIDSIMSTRSTSENEASRRL 335
Query: 606 ----LTELDGKEQRKD--VYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILK 659
L + DG D V +IG TN+P+ +D A+L+ RL K +YVP P R K+L
Sbjct: 336 KSEFLIQFDGVTSNPDDLVIIIGATNKPQELDDAVLR--RLVKRIYVPLPDSNVR-KLLF 392
Query: 660 ALARDTRLDAGVDLNVIGRMEACENMSGAELRAL 693
+ + D ++ ++ E SG++L+AL
Sbjct: 393 KTKLKCQPHSLSDGDIDKIVKETEGYSGSDLQAL 426
>AT4G04910.1 | Symbols: NSF | AAA-type ATPase family protein |
chr4:2489696-2495666 REVERSE LENGTH=742
Length = 742
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 132/266 (49%), Gaps = 36/266 (13%)
Query: 182 PKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIAN--ETRLPLYPISATALVSAGSGSSE 239
P LG K V G+LL GPPG GKT +A I + P ++ ++S G +E
Sbjct: 239 PHVTSRLGIK-HVKGMLLFGPPGTGKTLMARQIGKMLNGKDPKI-VNGPEVLSKFVGETE 296
Query: 240 ANIRDLFSKAYKTAPS--------IIFIDEIDAIASKRENSQHG--MENRMVSQLLTCMN 289
N+RDLF+ A + + +I DEIDAI R +++ G + + +V+QLLT ++
Sbjct: 297 KNVRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKID 356
Query: 290 QXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESAREDILSVLTRGL- 348
IG TNR D +D AL RPGR + ++ I +PDE+ R IL + T +
Sbjct: 357 ----GVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMK 412
Query: 349 ---LIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLRIVDERYVMREFLEDWLMESW 405
+ I+L++LA T ++GA+L +VK A A+ R + M+
Sbjct: 413 ENSFLGTDINLQELAARTKNYSGAELEGVVKSATSYALNRQLS-------------MDDL 459
Query: 406 SRE-ERDKLALKMSDFEEAIKVVQPS 430
++ E + + + M DF AI VQP+
Sbjct: 460 TKPVEEENIKITMEDFLHAIYEVQPA 485
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 34/161 (21%)
Query: 568 LQGPELLNKYVGESELAVRTLFSRA----RTCAPC-----ILF----------------- 601
+ GPE+L+K+VGE+E VR LF+ A RT I+F
Sbjct: 282 VNGPEVLSKFVGETEKNVRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGT 341
Query: 602 ------LDELLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRV 655
+++LLT++DG E +V +IG TNR + +D A+L+PGRL + + P R+
Sbjct: 342 GVHDSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRL 401
Query: 656 KILKALARDTRLDA--GVDLNVIGRMEACENMSGAELRALM 694
+IL+ + ++ G D+N+ +N SGAEL ++
Sbjct: 402 QILQIHTNKMKENSFLGTDINLQELAARTKNYSGAELEGVV 442
>AT1G62130.1 | Symbols: | AAA-type ATPase family protein |
chr1:22962365-22968920 REVERSE LENGTH=1043
Length = 1043
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 154/339 (45%), Gaps = 26/339 (7%)
Query: 134 LEMGNSRKATSTVNEGEVEVK--------GKRFRDFGGMKKVLERLKREVLLPLCHPKEW 185
LE+ + + V E E+ G F D G ++ V + LK V+LP P+ +
Sbjct: 720 LEIESKKSLKDIVTENTFEISDIIPPSEIGVTFDDIGALENVKDTLKELVMLPFQWPELF 779
Query: 186 RMLGHKPEVSGVLLHGPPGCGKTELAHAIANETRLPLYPISATALVSAGSGSSEANIRDL 245
+G+LL GP G GKT LA A+A E L +S + S G E ++ +
Sbjct: 780 CKGQLTKPCNGILLFGPSGTGKTMLAKAVATEAGANLINMSMSRWFSEG----EKYVKAV 835
Query: 246 FSKAYKTAPSIIFIDEIDAIASKRENSQHGMENRMVSQLLTCMNQXXXXXXXXXXXXXIG 305
FS A K +PSIIF+DE++++ + R+ ++ +N +
Sbjct: 836 FSLASKISPSIIFLDEVESMLHRY---------RLKTKNEFIINWDGLRTNEKERVLVLA 886
Query: 306 ATNRPDAVDPALRRPGRFDCEINIGIPDESAREDILSVLTRGLLIEGPIDLKKLARSTPG 365
ATNRP +D A+ R R + +G+PD +R IL V+ + D+ ++A T G
Sbjct: 887 ATNRPFDLDEAVIR--RLPHRLMVGLPDARSRSKILKVILSKEDLSPDFDIDEVASMTNG 944
Query: 366 FAGADLVCLVKIAGKLAMLRIVDERYVMRE-FLEDWLMESWSREERDKLALKMSDFEEAI 424
++G DL L A + ++ IV++ R+ + + + D LKM DF A+
Sbjct: 945 YSGNDLKNLCVTAARRRIIEIVEKEKSERDAAVAEGRVPPAGSGGSDLRVLKMEDFRNAL 1004
Query: 425 KVVQPSTRREGFSSIPNVKW-EDVGGLDSLRDE-FEDFI 461
++V S + + +W ED G S R+E F ++
Sbjct: 1005 ELVSMSISSKSVNMTALRQWNEDYGEGGSRRNESFSQYV 1043
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 574 LNKYVGESELAVRTLFSRARTCAPCILFLDEL---------------LTELDG--KEQRK 616
++++ E E V+ +FS A +P I+FLDE+ + DG +++
Sbjct: 821 MSRWFSEGEKYVKAVFSLASKISPSIIFLDEVESMLHRYRLKTKNEFIINWDGLRTNEKE 880
Query: 617 DVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILKALARDTRLDAGVDLNVI 676
V V+ TNRP +D A+++ RL L V P R KILK + L D++ +
Sbjct: 881 RVLVLAATNRPFDLDEAVIR--RLPHRLMVGLPDARSRSKILKVILSKEDLSPDFDIDEV 938
Query: 677 GRMEACENMSGAELRAL 693
M SG +L+ L
Sbjct: 939 ASM--TNGYSGNDLKNL 953
>AT4G04180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:2020471-2023673
FORWARD LENGTH=609
Length = 609
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 94/181 (51%), Gaps = 12/181 (6%)
Query: 196 GVLLHGPPGCGKTELAHAIANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAP- 254
VL GPPG GKT A IAN+ +PL + A++S G SE + +FS+A +
Sbjct: 363 AVLFEGPPGTGKTSCARVIANQAGIPLLYVPLEAVMSKYYGESERLLGAVFSQANELPDG 422
Query: 255 SIIFIDEIDAIASKRENSQHGMENRMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVD 314
+IIF+DEIDA A R++ H R++S LL ++ I ATNR +D
Sbjct: 423 AIIFLDEIDAFAISRDSEMHEATRRVLSVLLRQID----GFEQEKKVVVIAATNRKQDLD 478
Query: 315 PALRRPGRFDCEINIGIPDESAREDILSVLTRGLLIEGPIDLKKLARSTPGFAGADL--V 372
PAL RFD I +PD R++I++ + L +L +LA++T +G D+ V
Sbjct: 479 PAL--ISRFDSMIMFDLPDLQTRQEIIAQYAKQL---SKPELVQLAQATEAMSGRDIRDV 533
Query: 373 C 373
C
Sbjct: 534 C 534
>AT3G04340.1 | Symbols: emb2458 | FtsH extracellular protease family
| chr3:1146943-1153341 REVERSE LENGTH=1320
Length = 1320
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 10/188 (5%)
Query: 158 FRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANE 217
++F ++ + E + EV+ L +PK ++ +G + GVL+ G G GKT LA AIA E
Sbjct: 783 LKNFASIESMREEIN-EVVAFLQNPKAFQEMGARAP-RGVLIVGERGTGKTSLALAIAAE 840
Query: 218 TRLPLYPISATALVSA-GSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHGM 276
R+P+ + A L + G S AN+R+LF A AP IIF+++ D A R H
Sbjct: 841 ARVPVVNVEAQELEAGLWVGQSAANVRELFQTARDLAPVIIFVEDFDLFAGVRGKFVHTK 900
Query: 277 EN---RMVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPD 333
+ ++QLL ++ + T +D ALRRPGR D ++ P
Sbjct: 901 QQDHESFINQLLVELD----GFEKQDGVVLMATTRNHKQIDEALRRPGRMDRVFHLQSPT 956
Query: 334 ESAREDIL 341
E RE IL
Sbjct: 957 EMERERIL 964
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 25/122 (20%)
Query: 577 YVGESELAVRTLFSRARTCAPCILF-------------------------LDELLTELDG 611
+VG+S VR LF AR AP I+F +++LL ELDG
Sbjct: 858 WVGQSAANVRELFQTARDLAPVIIFVEDFDLFAGVRGKFVHTKQQDHESFINQLLVELDG 917
Query: 612 KEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILKALARDTRLDAGV 671
E++ V ++ TT + +D A+ +PGR+ + ++ P+ +R +IL A +T V
Sbjct: 918 FEKQDGVVLMATTRNHKQIDEALRRPGRMDRVFHLQSPTEMERERILHNAAEETMDRELV 977
Query: 672 DL 673
DL
Sbjct: 978 DL 979
>AT1G45000.2 | Symbols: | AAA-type ATPase family protein |
chr1:17009220-17011607 FORWARD LENGTH=335
Length = 335
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 74/133 (55%), Gaps = 1/133 (0%)
Query: 158 FRDFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANE 217
+ GG+ + L+ + LPL +P+ + +G KP GVLL+GPPG GKT LA AIA+
Sbjct: 138 YSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASN 196
Query: 218 TRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHGME 277
+ ++A++ G S IR++F+ A + P IIF+DEIDAI +R + +
Sbjct: 197 IDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSAD 256
Query: 278 NRMVSQLLTCMNQ 290
+ L+ +NQ
Sbjct: 257 REIQRTLMELLNQ 269
>AT1G02890.2 | Symbols: | AAA-type ATPase family protein |
chr1:645372-651797 REVERSE LENGTH=1218
Length = 1218
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 127 TVTKNVEL--EMGNSRKAT-----STVNEGEVEVK-----------GKRFRDFGGMKKVL 168
++T ++L E+ N K+T V E E E K G F D G ++ V
Sbjct: 894 SITYGLQLLHEIQNENKSTKKSLKDVVTENEFEKKLLSDVIPPSDIGVSFSDIGALENVK 953
Query: 169 ERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANETRLPLYPISAT 228
+ LK V+LPL P+ + G+LL GPPG GKT LA A+A E IS +
Sbjct: 954 DTLKELVMLPLQRPELFGKGQLTKPTKGILLFGPPGTGKTMLAKAVATEAGANFINISMS 1013
Query: 229 ALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKREN-SQHGMENRMVSQLLTC 287
++ S ++D++ +REN +H +M ++ +
Sbjct: 1014 SITS----------------------------KVDSMLGRRENPGEHEAMRKMKNEFM-- 1043
Query: 288 MNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESAREDILSVLTRG 347
+N + ATNRP +D A+ R R + + +PD + R ILSV+
Sbjct: 1044 INWDGLRTKDKERVLVLAATNRPFDLDEAVIR--RLPRRLMVNLPDSANRSKILSVILAK 1101
Query: 348 LLIEGPIDLKKLARSTPGFAGADLVCLVKIAGKLAMLRIVD----ERYVMREFLEDWLME 403
+ +DL+ +A T G++G+DL L A L + I++ ER V + E+ M
Sbjct: 1102 EEMAEDVDLEAIANMTDGYSGSDLKNLCVTAAHLPIREILEKEKKERSVAQA--ENRAMP 1159
Query: 404 SWSREERDKLALKMSDFEEA 423
D L M+DF+ A
Sbjct: 1160 QL-YSSTDVRPLNMNDFKTA 1178
>AT5G17730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:5852498-5853999
REVERSE LENGTH=470
Length = 470
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 17/147 (11%)
Query: 191 KPEVSGVLLHGPPGCGKTELAHAIANETRLPLYPISATALVSAGSGSSEANIRDLFSKAY 250
KP G LL+GPPG GKT L AIAN + +Y + ++ +A++R L
Sbjct: 242 KPWKRGYLLYGPPGTGKTSLVAAIANYLKFDIYDLQLASV------REDADLRRLLLGT- 294
Query: 251 KTAPSIIFIDEIDA-------IASKRENSQHGMENRMVSQLLTCMNQXXXXXXXXXXXXX 303
T SI+ +++ID + K ++ G +S LLTC++
Sbjct: 295 -TNSSILLVEDIDCAVDLHTRLQPKTQDDTKGSSMLTLSGLLTCID--GLWSSCGDERIV 351
Query: 304 IGATNRPDAVDPALRRPGRFDCEINIG 330
I T + +DPAL RPGR D I++G
Sbjct: 352 IFTTTHKERLDPALLRPGRMDMHIHMG 378
>AT2G18193.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:7917621-7919184
REVERSE LENGTH=495
Length = 495
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 76/174 (43%), Gaps = 17/174 (9%)
Query: 160 DFGGMKKVLERLKREVLLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANETR 219
D KK+++ L+R KE+ K G LL+GPPG GK+ L A+AN +
Sbjct: 214 DPNAKKKIIDDLER-----FLKRKEFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK 268
Query: 220 LPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHGMENR 279
++ + +++ G R L S T SI+ I++ID A R+ E+
Sbjct: 269 FDVFDLELSSIYDNGELK-----RVLLS---TTNRSILVIEDIDCNAEVRDREAENQEDE 320
Query: 280 MVSQLLT---CMNQXXXXXXXXXXXXXI-GATNRPDAVDPALRRPGRFDCEINI 329
+ +T +N I TN + +DPAL RPGR D IN+
Sbjct: 321 QIKGKVTLSGILNFIDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDVHINM 374
>AT3G50940.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:18934086-18935528
FORWARD LENGTH=451
Length = 451
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 78/194 (40%), Gaps = 58/194 (29%)
Query: 177 LPLCHPKEWRMLGHKPEVS--------------------------GVLLHGPPGCGKTEL 210
+ L HP +R L PEV G LL+GPPG GK+ L
Sbjct: 204 VTLDHPSTFRTLALDPEVKKNLVEDLDRFVQRKGFYGRVGKAWKRGYLLYGPPGTGKSSL 263
Query: 211 AHAIANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPSIIFIDEIDAI----- 265
AIAN +Y + T+L ++ A +R L SI+ +++ID
Sbjct: 264 IAAIANHLNFDIYDLDLTSL------NNNAELRRLLMST--ANRSILVVEDIDCSIELKD 315
Query: 266 -ASKRENSQHGMENRMVSQLL--------TCMNQXXXXXXXXXXXXXIGATNRPDAVDPA 316
++ +EN+ + +S LL +C N+ + TN + +DPA
Sbjct: 316 RSTDQENNDPLHKTVTLSGLLNFVDGLWSSCGNE----------RIIVFTTNYREKLDPA 365
Query: 317 LRRPGRFDCEINIG 330
L RPGR D I++
Sbjct: 366 LLRPGRMDMHIHMS 379
>AT3G28600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:10722437-10723870
FORWARD LENGTH=477
Length = 477
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 73/172 (42%), Gaps = 27/172 (15%)
Query: 176 LLPLCHPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANETRLPLYPISATALVSAGS 235
L + KE+ K G LLHGPPG GK+ + A+AN +Y + TA+
Sbjct: 220 LAAFSNGKEYYKKIGKAWKRGYLLHGPPGTGKSTMIAAMANHLNYSIYDLELTAI----- 274
Query: 236 GSSEANIRDLFSKAYKTAPSIIFIDEIDA-------------IASKRENSQHGMENR--- 279
+ + +R L + ++ SII I++ID + + RE+ + G E
Sbjct: 275 -RNNSELRKLLTAT--SSKSIIVIEDIDCSLDLTGKRKKEKNLMTSREDGEQGTEEDKSF 331
Query: 280 -MVSQLLTCMNQXXXXXXXXXXXXXIGATNRPDAVDPALRRPGRFDCEINIG 330
+S LL ++ I TN + +DPAL R GR D I +
Sbjct: 332 VTLSGLLNFID--GIWSACGQERIIIFTTNHFEKLDPALIRRGRMDMHIELS 381
>AT5G17740.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:5856235-5857934
REVERSE LENGTH=533
Length = 533
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 22/147 (14%)
Query: 196 GVLLHGPPGCGKTELAHAIANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPS 255
G LL+GPPG GK+ L A+AN + +Y + ++ +A++R L + S
Sbjct: 247 GYLLYGPPGTGKSSLVAAMANYLKFDIYDLQLASV------QGDAHLRSLLLATNNS--S 298
Query: 256 IIFIDEIDA-------IASKRENSQ-----HGMENRMVSQLLTCMNQXXXXXXXXXXXXX 303
I+ I++ID + E SQ + +S LL C++
Sbjct: 299 ILLIEDIDCSVDLPTRLQPPTETSQPLGAVQVSKPLTLSGLLNCID--GLWSSCGNERII 356
Query: 304 IGATNRPDAVDPALRRPGRFDCEINIG 330
I TN + +DPAL RPGR D I +G
Sbjct: 357 IFTTNNKEKLDPALLRPGRMDMHIYMG 383
>AT5G17760.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:5860591-5862301
REVERSE LENGTH=505
Length = 505
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 21/145 (14%)
Query: 196 GVLLHGPPGCGKTELAHAIANETRLPLYPISATALVSAGSGSSEANIRDLFSKAYKTAPS 255
G LL+GPPG GK+ L A+AN + +Y + +++ ++++R L S
Sbjct: 255 GYLLYGPPGTGKSSLVAAMANYLKFDVYDLQLASVM------RDSDLRRLLLATRNR--S 306
Query: 256 IIFIDEIDA---IASKRENSQHGMENRMVSQ-------LLTCMNQXXXXXXXXXXXXXIG 305
I+ I++ID + ++ E G +NR SQ LL ++ I
Sbjct: 307 ILVIEDIDCAVDLPNRIEQPVEG-KNRGESQGPLTLSGLLNFID--GLWSSCGDERIIIF 363
Query: 306 ATNRPDAVDPALRRPGRFDCEINIG 330
TN D +DPAL RPGR D I +G
Sbjct: 364 TTNHKDRLDPALLRPGRMDMHIYMG 388
>AT4G24710.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:12745752-12748995
REVERSE LENGTH=475
Length = 475
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 24/176 (13%)
Query: 197 VLLHGPPGCGKTELAHAIANE------TRLP---LYPISATALVSAGSGSSEANIRDLFS 247
+LLHGPPG GKT L A+A + +R P L ++A +L S S + LF
Sbjct: 213 ILLHGPPGTGKTSLCKALAQKLSIRCNSRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 272
Query: 248 KAYKTAPS-----IIFIDEIDAIASKRENSQHGMEN----RMVSQLLTCMNQXXXXXXXX 298
K + + IDE++++A+ R+ + G E R+V+ LLT M++
Sbjct: 273 KIQEMVEEDGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDK----LKSA 328
Query: 299 XXXXXIGATNRPDAVDPALRRPGRFDCEINIGIPDESAREDILSVLTRGLLIEGPI 354
+ +N A+D A R D + +G P R +IL L+ +G I
Sbjct: 329 PNVIILTTSNITTAIDVAFV--DRADIKAYVGPPTLHVRYEILRSCVEELISKGII 382