Miyakogusa Predicted Gene

Lj0g3v0363379.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0363379.1 tr|G7IBH0|G7IBH0_MEDTR Tel2-interacting protein
OS=Medicago truncatula GN=MTR_1g038850 PE=4 SV=1,76.74,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,NULL,CUFF.25041.1
         (846 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79190.1 | Symbols:  | ARM repeat superfamily protein | chr1:...   765   0.0  

>AT1G79190.1 | Symbols:  | ARM repeat superfamily protein |
           chr1:29788639-29794116 FORWARD LENGTH=1335
          Length = 1335

 Score =  765 bits (1976), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/837 (49%), Positives = 564/837 (67%), Gaps = 54/837 (6%)

Query: 18  RSTTFQRLKSHSLQLLDLIRNPNNQNQKHFSLVVIPELLHFLHNSSSSDLQPFFDYTLFP 77
           R   F +LK   L+LL+L +NP            IP LL  L  +  S LQ FF YTLFP
Sbjct: 22  REAVFAQLKVLCLELLNLSQNPEKDP------TTIPALLLLLRRTPPSSLQSFFHYTLFP 75

Query: 78  XXXXXDAAIQCRSSQKVDSQEMYVPKTPFQVSDGIAEGVVHCLEELLSKCHLNSVDQMVV 137
                DAA+ CRS  +   +E   P+TP++VSD +AEGV+ CLEELL KCH+ S+DQMVV
Sbjct: 76  LLLLLDAAVACRSQGQNKPEEF--PQTPYRVSDKVAEGVISCLEELLKKCHIGSIDQMVV 133

Query: 138 LLKKLTYGALLSPSEASEEFREGILLCFRALLLSLHSCCDVSCSCKQITGLPALSDNI-Y 196
           ++KKLT GA+LSPSEASEEFREGI+ CFRA++  L  C D SCSCK+  G P LSD   Y
Sbjct: 134 IMKKLTSGAVLSPSEASEEFREGIVKCFRAMISGLLPCSDDSCSCKRTVGWPQLSDRRDY 193

Query: 197 NDRLHKTFNYGSESGECLLAFLRSEAASAAVGHWLSLLLKAADTESARGQRGSSRLRIEA 256
             ++ +++ Y  E+ ECLLAFL+S++A AAVGHWLS+LLK AD E++RG RGS+ LR+EA
Sbjct: 194 QTQVSESYKYDFETRECLLAFLQSQSALAAVGHWLSILLKVADAEASRGHRGSANLRVEA 253

Query: 257 FKTLRVLVAKIGSADALAFFLPGIVSQLAKVLHAAKTMISGAAGSMESIDQAIRGLAEFL 316
           F  LR+LVAKIG+AD LAFFLPG+VSQ+ KVLH ++ MISGAAGS++++DQAIRGLAEFL
Sbjct: 254 FMALRILVAKIGTADVLAFFLPGVVSQVFKVLHVSRAMISGAAGSVDALDQAIRGLAEFL 313

Query: 317 MIVLQDDANASVLDTETSSNFDSNECKSSISLLEELRYLQDKDCAKTKSFEDRSVESENI 376
           MIVL+D+AN+S L+  ++ +  S + +S+ S+L+ELR L  K             +S+ +
Sbjct: 314 MIVLEDEANSSALEI-SNGDTKSQKHESAHSILDELRSLTTKSQG----------QSDEL 362

Query: 377 SCSQNQLQGIGSTSPVKENKSLH-----VTRTKDWIQKTSAHVNKLLSATFPQICIHSSQ 431
           +   NQ + +    P K N +L      V RTK W+  T++HVNKLL  TFP I IH + 
Sbjct: 363 TEITNQ-EIVNINVPEKSNLNLSRDSFLVERTKKWLDSTTSHVNKLLCETFPHILIHPAG 421

Query: 432 KVRKGLVEAIKGLLLECFYTLRESRQMLLECLCALAVDESDDVSSTSQDFLECLFSQNRK 491
           K+R G + AI+GLL +   +L+ +R ++LEC+C LAVD+SD+VS  +Q+FL+ LFS++ K
Sbjct: 422 KIRWGFLAAIRGLLSKSSCSLKGARLVMLECVCTLAVDDSDEVSVAAQEFLDHLFSESTK 481

Query: 492 TLIERDAADIFIRHLEKLPKVVLSNEESNAVLHAQQLLTIIFYSGPRLLVDHLQSPVGAA 551
             +E D   IF R LE+LPKVVL NEE  A+   +QLL I +YSGP+ L DHLQSP+ A+
Sbjct: 482 NHVESDIKKIFSRLLERLPKVVLGNEELPALSVVKQLLVITYYSGPQFLADHLQSPITAS 541

Query: 552 KFLDVFATCLSHNSVFSGSLGKITSSR-SSTLGYLPSIAELKSGANFFSYGLPLINSGSC 610
           +FLD+F+ CLSHNS F+GSL K+ + R SS+ GYLPSI ELK G     Y   + N    
Sbjct: 542 RFLDIFSLCLSHNSAFTGSLEKLIAERPSSSTGYLPSITELKVGFRETRYNRAVPNITET 601

Query: 611 EAPKCSLIEEKSTQGPFKSAHENKKLPRMPPWFSYVGSLKLYQPLSWILRLLALSSVADH 670
           +  K  +           S+  +  LPRMPPWFSYVGS KLY+ L+ ILRL+ LS +A  
Sbjct: 602 DQVKLEI-----------SSPSSHMLPRMPPWFSYVGSQKLYEMLAGILRLVGLSLMAGF 650

Query: 671 RSEGLLSHLTETLLGYFRKLVTDLRLKEYKKESWQSWYDRTGSGQLLRQASTAACMLNEI 730
           ++EG L+ + +  LG+ RKLV+++R+KEY  E WQSW +RTGSGQL+RQA+TAAC+LNE+
Sbjct: 651 KNEGHLAVILDIPLGFVRKLVSEVRVKEYNGEDWQSWCNRTGSGQLVRQAATAACILNEM 710

Query: 731 IFGLSDQAVSDFARKFHRSSISTRGQDQSDKLDCSLCESFWKMPKDKGVKSRLVDCIGEI 790
           IFGLSDQA    +R   +S    +G+D+            W++  +K  K+ L++C+G+I
Sbjct: 711 IFGLSDQATDALSRLLQKSR---KGRDKLS----------WEISWNKRAKTNLIECVGKI 757

Query: 791 LHEYLSAEVWNVPVDRRVADLQLDFAVEDISLYFFQDSAMLHEERHFFHGC-LFSVC 846
           LHEY ++EVW++PVD++    Q D   + ISL+F +DSAMLH+      G  +FS+C
Sbjct: 758 LHEYQASEVWDLPVDQKAILGQTDNDGQHISLHFLRDSAMLHQV--IIEGVGVFSLC 812