Miyakogusa Predicted Gene
- Lj0g3v0363199.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0363199.1 Non Chatacterized Hit- tr|B9SU07|B9SU07_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,33.99,0.000000000000001,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; mTERF,Mitochodrial transcription termination
factor,CUFF.25022.1
(379 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G07900.1 | Symbols: | Mitochondrial transcription terminatio... 215 3e-56
AT1G21150.1 | Symbols: | Mitochondrial transcription terminatio... 171 8e-43
AT1G61980.1 | Symbols: | Mitochondrial transcription terminatio... 147 8e-36
AT1G62120.1 | Symbols: | Mitochondrial transcription terminatio... 142 3e-34
AT1G61970.2 | Symbols: | Mitochondrial transcription terminatio... 142 4e-34
AT1G61970.1 | Symbols: | Mitochondrial transcription terminatio... 142 4e-34
AT1G61990.1 | Symbols: | Mitochondrial transcription terminatio... 131 9e-31
AT3G46950.1 | Symbols: | Mitochondrial transcription terminatio... 110 1e-24
AT1G56380.2 | Symbols: | Mitochondrial transcription terminatio... 107 1e-23
AT1G56380.1 | Symbols: | Mitochondrial transcription terminatio... 107 1e-23
AT1G62085.1 | Symbols: | Mitochondrial transcription terminatio... 105 7e-23
AT1G61960.1 | Symbols: | Mitochondrial transcription terminatio... 104 1e-22
AT5G64950.1 | Symbols: | Mitochondrial transcription terminatio... 102 6e-22
AT1G62150.1 | Symbols: | Mitochondrial transcription terminatio... 98 9e-21
AT1G62110.1 | Symbols: | Mitochondrial transcription terminatio... 98 9e-21
AT1G62010.1 | Symbols: | Mitochondrial transcription terminatio... 96 4e-20
AT5G23930.1 | Symbols: | Mitochondrial transcription terminatio... 89 7e-18
AT1G62490.1 | Symbols: | Mitochondrial transcription terminatio... 74 1e-13
AT5G54180.1 | Symbols: PTAC15 | plastid transcriptionally active... 65 5e-11
AT1G79220.1 | Symbols: | Mitochondrial transcription terminatio... 59 7e-09
AT1G74120.1 | Symbols: | Mitochondrial transcription terminatio... 54 1e-07
AT2G44020.1 | Symbols: | Mitochondrial transcription terminatio... 50 3e-06
>AT5G07900.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:2520188-2521405 FORWARD
LENGTH=405
Length = 405
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/364 (33%), Positives = 206/364 (56%), Gaps = 14/364 (3%)
Query: 27 YVFLQLKPYPSPLSLFSTTSHSSDKQ----SFTITYFTDNCGFSHQAALKASNRVRFDEP 82
+VF + SP++ ++ + D+Q SFT+ Y D+CG S +A AS ++ D P
Sbjct: 39 FVFSLQTQFSSPVTTLTSKNPKDDEQQQKLSFTLNYLIDSCGLSPDSATVASRKLLLDSP 98
Query: 83 KKPDSVIAFFTNHGFSISQIHNIIGRLPELLVFDPTKTLLPKFQFLASKG---SDIVTTV 139
++P++V+ +HGF+ +QI +++ + P LL+ + LLPK F S G S + T+
Sbjct: 99 ERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKLSFFLSIGVSKSLLARTL 158
Query: 140 TRYPYFLRQSLEHYIIPAFEFVRTFSPSDEKAIACVLFGSNTITIDHMKS---KVNLLLD 196
P L +SL + +IP++ F+++ SDEK +A + + DH K+ +N + +
Sbjct: 159 ASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMAE 218
Query: 197 MGLSPSNIYLLFRISP--TILRFADLKEAVEEVKGLGFHPSKSLFVVALQAKRAV-SKSL 253
G+ I LL P + + + + ++ + +GF+P KS FV+A+ A +KS+
Sbjct: 219 TGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSI 278
Query: 254 WDAKLDAFKTWGWSEDDVLDAFRRDPHIMTYSIKKVNAVMSFWVDHLGWDPSVLLAVPSL 313
WD + ++ WGWSEDD++ AF++ PH M S +K+N M ++V+ + P + P +
Sbjct: 279 WDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVV 338
Query: 314 FGYSLEKRLRPRASVVQYLLSRGLRKKDASLIKPFMLTEKLFLQKFVECFEEEETSKLLS 373
+SLEKR+ PR SV + L+S GL K+D SL + EK+FL+K V + EEE +L++
Sbjct: 339 LFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKY-EEELPELMN 397
Query: 374 LYQG 377
LY G
Sbjct: 398 LYLG 401
>AT1G21150.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:7406406-7407578 REVERSE
LENGTH=390
Length = 390
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 172/324 (53%), Gaps = 9/324 (2%)
Query: 52 QSFTITYFTDNCGFSHQAALKASNRVRFDEPKKPDSVIAFFTNHGFSISQIHNIIGRLPE 111
+SFT++Y D+CG S ++A S V+ KKPDSV+A F +HGF+ QI ++I P
Sbjct: 55 ESFTVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPR 114
Query: 112 LLVFDPTKTLLPKFQFLASKG---SDIVTTVTRYPYFLRQSLEHYIIPAFEFVRTFSPSD 168
+L P + PK F +S G SD ++ P L SL +IP ++ +++ +
Sbjct: 115 VLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEE 174
Query: 169 EKAIACVLFGSN--TITIDHMKS-KVNLLLDMGLSPSNIYLLFRISPTIL--RFADLKEA 223
E + C+ G ++ I H S +V++ ++G+ +I L + SP R E
Sbjct: 175 ESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEV 234
Query: 224 VEEVKGLGFHPSKSLFVVALQAKRAVSKSLWDAKLDAFKTWGWSEDDVLDAFRRDPHIMT 283
+ V GF P K+ FV A+ A S+S + K F+ +GWS++D + A R P+ +T
Sbjct: 235 LNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVT 294
Query: 284 YSIKKVNAVMSFWVDHLGWDPSVLLAVPSLFGYSLEKRLRPRASVVQYLLSRGL-RKKDA 342
S +K+ + + V+++G ++A P + S+EKR++PR V+ LLS+GL +K+D
Sbjct: 295 VSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDI 354
Query: 343 SLIKPFMLTEKLFLQKFVECFEEE 366
+ L F+ KFV +++E
Sbjct: 355 NYFTILKLKSSEFMDKFVLKYQDE 378
>AT1G61980.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22908162-22909418 FORWARD
LENGTH=418
Length = 418
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 189/370 (51%), Gaps = 47/370 (12%)
Query: 52 QSFTITYFTDNCGFSHQAALKASNRVRFDEPKKPDSVIAFFTNHGFSISQIHNIIGRLPE 111
+SFT++Y D+ G + A S +V F++ PDSV+ +HGF+ SQI I+ P+
Sbjct: 51 KSFTVSYLVDSLGLPKKLAESVSRKVSFEDKDNPDSVLNLLRSHGFTDSQISTIVTDYPQ 110
Query: 112 LLVFDPTKTLLPKFQFLASKG---SDIVTTVTRYPYFLRQSLEHYIIPAFEFVRT--FSP 166
LLV D K+L PK QFL S+G S++ V+ P L + I ++F++
Sbjct: 111 LLVADAEKSLAPKLQFLQSRGASSSELTEIVSTVPKILGKRGHKTISVFYDFIKETLLDK 170
Query: 167 SDEKAIACVLFGSNTITIDHMKSKVNLLLDMGLSPSNIYLLFRISPTILRFADLK--EAV 224
S + +C F + ++ +++L ++G+ P + IS + F K E++
Sbjct: 171 SSKSEKSCQPFPQGNL--ENKIRNLSVLRELGM-PHKLLFPLLISCDVPVFGKEKFEESL 227
Query: 225 EEVKGLGFHPSKSLFVVALQAKRAVSKSLWDAKLDAFKTWGWSEDDVLDAFRRDPHIMTY 284
++V +GF PS S FV AL + +S + K++A+K G+ + V F+R P+ +T+
Sbjct: 228 KKVVEMGFDPSTSKFVEALCVVQRLSDKNIEDKVNAYKRLGFDVEYVWTVFKRWPNFLTH 287
Query: 285 SIKKV-NAVMSFW----------------------------------VDHLGWDPSVLLA 309
S KK+ N + +F V + W L++
Sbjct: 288 SEKKILNTIETFLGLGFSRDEFSVLIKRFPQGIGLSAEMVKKKTEFLVKKMNWPLKALVS 347
Query: 310 VPSLFGYSLEKRLRPRASVVQYLLSRGLRKKD-ASLIKPFMLTEKLFLQKFVECFEEEE- 367
P++ GYSLEKR PR +VVQ L+S+GL + S+ + F+ T+++FL ++V+ E+++
Sbjct: 348 NPAVLGYSLEKRTVPRGNVVQALISKGLIGSELPSISRVFVCTDQVFLNRYVKRHEDKQL 407
Query: 368 TSKLLSLYQG 377
++L+++Y+
Sbjct: 408 ETELMAIYRA 417
>AT1G62120.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22960326-22961639 REVERSE
LENGTH=437
Length = 437
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 180/371 (48%), Gaps = 43/371 (11%)
Query: 52 QSFTITYFTDNCGFSHQAALKASNRVRFDEPKKPDSVIAFFTNHGFSISQIHNIIGRLPE 111
+FT++Y D+ G + + A S +V FD PDSV++ +HGF+ SQI NII P
Sbjct: 55 HNFTVSYLVDSLGLATKVAESISMKVSFDNKGNPDSVLSLLRSHGFTDSQISNIIRTFPR 114
Query: 112 LLVFDPTKTLLPKFQFLASKG---SDIVTTVTRYPYFLRQSLEHYIIPAFEFVRTFSPSD 168
LL+ D K+L PK QFL S G S++ TV+ P L + + ++FV+ +D
Sbjct: 115 LLILDAEKSLAPKLQFLQSIGASSSELTETVSAVPKILGKRKGKSLSRYYDFVKVIIEAD 174
Query: 169 EKAIACVLFGSNTITIDHMKSKVNLLL--DMGLSPSNIY-LLFRISPTILRFADLKEAVE 225
+ + L S NLL+ +MG+ ++ LL + + KE+++
Sbjct: 175 KSSKLEKLCHSLPEGSKQENKIRNLLVLREMGVPQRLLFSLLISDAGDVCGKEKFKESLK 234
Query: 226 EVKGLGFHPSKSLFVVALQAKRAVSKSLWDAKLDAFKTWGWSEDDVLDAFRRDPHIMTYS 285
+ +GF P+ + FV AL +S + K +A K G + DDV F++ P+I+T S
Sbjct: 235 KAVEIGFDPTTATFVKALNVLYGLSDKGIENKFNACKRLGLAVDDVWAMFKKWPNILTKS 294
Query: 286 IKKV-NAVMS----------------------------------FWVDHLGWDPSVLLAV 310
KK+ N+V + F V + W + ++
Sbjct: 295 EKKIENSVETFLGLGFSRDEFLMMVKRFPQCIGYSTELMKTKTEFLVTEMNWPLKAVASI 354
Query: 311 PSLFGYSLEKRLRPRASVVQYLLSRGLRKKDASLIKPFML-TEKLFLQKFVECFEEEE-T 368
P + GYSLEKR PR +V++ L+S+GL + + I + T ++FL +V ++++
Sbjct: 355 PQVLGYSLEKRTVPRCNVIKVLISKGLLESELPPISSVLTSTSEVFLYMYVRKHDDKQLV 414
Query: 369 SKLLSLYQGGR 379
++L++++ G R
Sbjct: 415 AELMAIFTGDR 425
>AT1G61970.2 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22904713-22905969 FORWARD
LENGTH=418
Length = 418
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 185/371 (49%), Gaps = 49/371 (13%)
Query: 52 QSFTITYFTDNCGFSHQAALKASNRVRFDEPKKPDSVIAFFTNHGFSISQIHNIIGRLPE 111
+FT++Y D+ G + + A S +V F++ PDSV+ T+HGF+ SQI II P+
Sbjct: 51 NNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQ 110
Query: 112 LLVFDPTKTLLPKFQFLASKG---SDIVTTVTRYPYFLRQSLEHYIIPAFEFVRTF---- 164
LL+ D K+L PK QFL S+G S+I V+ P L + I ++F++
Sbjct: 111 LLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEK 170
Query: 165 SPSDEKAIACVLFGSNTITIDHMKSKVNLLLDMGLSPSNIY-LLFRISPTILRFADLKEA 223
S +EK + G+ +++ V++L ++G+ ++ LL S + +E
Sbjct: 171 SSKNEKLCHSLPQGN----LENKIRNVSVLRELGMPHKLLFSLLISDSQPVCGKEKFEET 226
Query: 224 VEEVKGLGFHPSKSLFVVALQAKRAVSKSLWDAKLDAFKTWGWSEDDVLDAFRRDPHIMT 283
+++V +GF P+ S FV ALQ +++ + K+ +K+ G+ DV +F++ P +
Sbjct: 227 LKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLR 286
Query: 284 YSIKK-----------------------------------VNAVMSFWVDHLGWDPSVLL 308
S KK V F V + W ++
Sbjct: 287 VSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVV 346
Query: 309 AVPSLFGYSLEKRLRPRASVVQYLLSRGL-RKKDASLIKPFMLTEKLFLQKFVEC-FEEE 366
+ P++FGYSLEKR+ PR +V++ L+S+GL R + S+ M T+++FL ++V +++
Sbjct: 347 SNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQ 406
Query: 367 ETSKLLSLYQG 377
++L+++Y+
Sbjct: 407 LVTELMAIYRA 417
>AT1G61970.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22904713-22905969 FORWARD
LENGTH=418
Length = 418
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 185/371 (49%), Gaps = 49/371 (13%)
Query: 52 QSFTITYFTDNCGFSHQAALKASNRVRFDEPKKPDSVIAFFTNHGFSISQIHNIIGRLPE 111
+FT++Y D+ G + + A S +V F++ PDSV+ T+HGF+ SQI II P+
Sbjct: 51 NNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQ 110
Query: 112 LLVFDPTKTLLPKFQFLASKG---SDIVTTVTRYPYFLRQSLEHYIIPAFEFVRTF---- 164
LL+ D K+L PK QFL S+G S+I V+ P L + I ++F++
Sbjct: 111 LLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEK 170
Query: 165 SPSDEKAIACVLFGSNTITIDHMKSKVNLLLDMGLSPSNIY-LLFRISPTILRFADLKEA 223
S +EK + G+ +++ V++L ++G+ ++ LL S + +E
Sbjct: 171 SSKNEKLCHSLPQGN----LENKIRNVSVLRELGMPHKLLFSLLISDSQPVCGKEKFEET 226
Query: 224 VEEVKGLGFHPSKSLFVVALQAKRAVSKSLWDAKLDAFKTWGWSEDDVLDAFRRDPHIMT 283
+++V +GF P+ S FV ALQ +++ + K+ +K+ G+ DV +F++ P +
Sbjct: 227 LKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLR 286
Query: 284 YSIKK-----------------------------------VNAVMSFWVDHLGWDPSVLL 308
S KK V F V + W ++
Sbjct: 287 VSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVV 346
Query: 309 AVPSLFGYSLEKRLRPRASVVQYLLSRGL-RKKDASLIKPFMLTEKLFLQKFVEC-FEEE 366
+ P++FGYSLEKR+ PR +V++ L+S+GL R + S+ M T+++FL ++V +++
Sbjct: 347 SNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQ 406
Query: 367 ETSKLLSLYQG 377
++L+++Y+
Sbjct: 407 LVTELMAIYRA 417
>AT1G61990.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22911453-22912697 FORWARD
LENGTH=414
Length = 414
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 175/353 (49%), Gaps = 53/353 (15%)
Query: 52 QSFTITYFTDNCGFSHQAALKASNRVRFDEPKKPDSVIAFFTNHGFSISQIHNIIGRLPE 111
++FT++Y D+ G S + A S +V F++ PDSV++ F ++GF+ SQI II P
Sbjct: 51 KNFTVSYLVDSLGLSKKLAESISRKVSFEDKVNPDSVLSLFRSYGFTDSQISTIITDYPL 110
Query: 112 LLVFDPTKTLLPKFQFLASKG---SDIVTTVTRYPYFL-RQSLEHYIIPAFEFVRTFSPS 167
LLV D K L K Q L S+G S+I V+ P L ++S+ Y ++ V+ +
Sbjct: 111 LLVADAKKALGRKLQILQSRGASSSEITEIVSTVPRILGKKSITVY----YDAVKDIIVA 166
Query: 168 DEKAIACVLFGSNTITIDHMKSKVNLLLDMGLSPSNIYLLFRISPT--ILRFADLKEAVE 225
D + + GS I + V+ L ++G+ PS + L +S + + + +++
Sbjct: 167 DTSSSYELPQGSQGNKIRN----VSALRELGM-PSRLLLPLLVSKSQPVCGKENFDASLK 221
Query: 226 EVKGLGFHPSKSLFVVALQAKRAVSKSLWDAKLDAFKTWGWSEDDVLDAFRRDPHIM--- 282
+V +GF P+ + FV+AL+ +S+ + K+ F++ G++ DDV + F++ P ++
Sbjct: 222 KVVEMGFDPTTTKFVLALRMLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKKTPSVLKVS 281
Query: 283 --------------------------------TYSIKKVNAVMSFWVDHLGWDPSVLLAV 310
YS++ V F V + W + L+
Sbjct: 282 KKKILKSAETFLDLGYSRAEFLMMVKRYPPCIEYSVESVKKKNEFLVKKMKWPRNALVLH 341
Query: 311 PSLFGYSLEKRLRPRASVVQYLLSRGLRKKDASL---IKPFMLTEKLFLQKFV 360
P +FGYS+EKR+ PR ++++ LLS+GL +K + L T++ FL ++V
Sbjct: 342 PQVFGYSMEKRIIPRCNILEALLSKGLLRKGSELPAVSSVLSCTDEGFLDRYV 394
>AT3G46950.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr3:17289452-17290804 FORWARD
LENGTH=450
Length = 450
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 136/263 (51%), Gaps = 13/263 (4%)
Query: 35 YPSPLSLFSTT--SHSSDKQS-FTITYFTDNCGFSHQAALKASNRVRFDEPKKPDSVIAF 91
+P FS+T SS K S FT++Y ++ G + + A S +V F++ PDSV+
Sbjct: 31 FPFTTKSFSSTIAKDSSPKGSTFTVSYLVESLGLTKKLAETISKKVTFEDKVNPDSVLNL 90
Query: 92 FTNHGFSISQIHNIIGRLPELLVFDPTKTLLPKFQFLASKG---SDIVTTVTRYPYFLRQ 148
++GF SQI II P LLV D K+L PK QFL S+G S+++ V+ P L +
Sbjct: 91 LRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSNVPTILDK 150
Query: 149 SLEHYIIPAFEFVRTFSPSDEKAIACVLFGSNTITIDHMKSKVNLLLDMGLSPSNIY--L 206
E + ++FV+ + G I + +++L ++G+ ++ L
Sbjct: 151 KGEESVSLYYDFVKDIMQDGKSLCISCPEGKKGNRIRN----ISVLRELGVPQKLLFSLL 206
Query: 207 LFRISPTILRFADLKEAVEEVKGLGFHPSKSLFVVALQAKRAVSKSLWDAKLDAFKTWGW 266
+ R P + +E++++V +GF P+KS FV AL +S+ + K++ +K G+
Sbjct: 207 ISRYQPVCGK-EKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEKVNVYKRLGF 265
Query: 267 SEDDVLDAFRRDPHIMTYSIKKV 289
SE ++ F++ P+ + +S KK+
Sbjct: 266 SEAEIWAIFKKWPYFLKFSEKKI 288
>AT1G56380.2 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:21101327-21102701 FORWARD
LENGTH=399
Length = 399
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 180/371 (48%), Gaps = 52/371 (14%)
Query: 54 FTITYFTDNCGFSHQAALKASNRVRFDEPKKPDSVIAFFTNHGFSISQIHNIIGRLPELL 113
T++Y D+ G + A V + P+SV+ ++ F+ SQI +II PELL
Sbjct: 28 LTVSYLVDSVGIPIKFAESILKEVSSKDKCNPNSVLNLLRSYDFTDSQISSIITTDPELL 87
Query: 114 VFDPTKTLLPKFQFLASK---GSDIVTTVTRYPYFLRQSLEHYIIPAFEFVRTFS----- 165
+ D +L PK +FL S+ S + VTR P LR E +I ++FV+T +
Sbjct: 88 MEDAENSLCPKLKFLESREILSSRLNDIVTRVPKILRMEEEKSMITYYDFVKTITLTSSR 147
Query: 166 ----------PSDEKAIACVL-----------FGSN----TITIDHMKSKVNLLLDMGLS 200
P E +I V+ F + T++ + ++ +VN+ +G
Sbjct: 148 SDFYKVCELYPYIESSIRKVIEMGFDPFAPKIFDATVVVCTLSNETLEERVNIYKTLGFD 207
Query: 201 PSNIYLLFRISPTILRFADLK--EAVEEVKGLGFHPSKSLFVVAL--QAKRAVSKSLWD- 255
+++ +F+ PT L ++ K ++ E +K G + V+++ ++ + + S D
Sbjct: 208 VRDVWEMFKKCPTFLNISEKKITQSFETLKKCGLVEEE---VISMFQKSPQCIDFSELDI 264
Query: 256 -AKLDAFKTWGWSEDDVLDAFRRDPHIMTYSIKKV-NAVMSFWVDHLGWDPSVLL----- 308
+ K G E++VL F+R P + +S KK+ NAV +F D +++
Sbjct: 265 TQNFEFLKGCGLVEEEVLSMFKRYPQCIGFSEKKILNAVETFLGQGFSKDEVMMMVNREG 324
Query: 309 --AVPSLFGYSLEKRLRPRASVVQYLLSRGLRKKD-ASLIKPFMLTEKLFLQKFVECFEE 365
++P + +S+EK + PR +V++ L S+ L K + +S+ + +++FL+++V ++
Sbjct: 325 VVSIPVVLEFSMEKMIVPRCNVIKALTSKRLLKTEVSSMFSVLICPDEVFLERYVSKHDD 384
Query: 366 EE-TSKLLSLY 375
+E +L+S++
Sbjct: 385 QELVDELMSIF 395
>AT1G56380.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:21101374-21102701 FORWARD
LENGTH=388
Length = 388
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 180/371 (48%), Gaps = 52/371 (14%)
Query: 54 FTITYFTDNCGFSHQAALKASNRVRFDEPKKPDSVIAFFTNHGFSISQIHNIIGRLPELL 113
T++Y D+ G + A V + P+SV+ ++ F+ SQI +II PELL
Sbjct: 17 LTVSYLVDSVGIPIKFAESILKEVSSKDKCNPNSVLNLLRSYDFTDSQISSIITTDPELL 76
Query: 114 VFDPTKTLLPKFQFLASK---GSDIVTTVTRYPYFLRQSLEHYIIPAFEFVRTFS----- 165
+ D +L PK +FL S+ S + VTR P LR E +I ++FV+T +
Sbjct: 77 MEDAENSLCPKLKFLESREILSSRLNDIVTRVPKILRMEEEKSMITYYDFVKTITLTSSR 136
Query: 166 ----------PSDEKAIACVL-----------FGSN----TITIDHMKSKVNLLLDMGLS 200
P E +I V+ F + T++ + ++ +VN+ +G
Sbjct: 137 SDFYKVCELYPYIESSIRKVIEMGFDPFAPKIFDATVVVCTLSNETLEERVNIYKTLGFD 196
Query: 201 PSNIYLLFRISPTILRFADLK--EAVEEVKGLGFHPSKSLFVVAL--QAKRAVSKSLWD- 255
+++ +F+ PT L ++ K ++ E +K G + V+++ ++ + + S D
Sbjct: 197 VRDVWEMFKKCPTFLNISEKKITQSFETLKKCGLVEEE---VISMFQKSPQCIDFSELDI 253
Query: 256 -AKLDAFKTWGWSEDDVLDAFRRDPHIMTYSIKKV-NAVMSFWVDHLGWDPSVLL----- 308
+ K G E++VL F+R P + +S KK+ NAV +F D +++
Sbjct: 254 TQNFEFLKGCGLVEEEVLSMFKRYPQCIGFSEKKILNAVETFLGQGFSKDEVMMMVNREG 313
Query: 309 --AVPSLFGYSLEKRLRPRASVVQYLLSRGLRKKD-ASLIKPFMLTEKLFLQKFVECFEE 365
++P + +S+EK + PR +V++ L S+ L K + +S+ + +++FL+++V ++
Sbjct: 314 VVSIPVVLEFSMEKMIVPRCNVIKALTSKRLLKTEVSSMFSVLICPDEVFLERYVSKHDD 373
Query: 366 EE-TSKLLSLY 375
+E +L+S++
Sbjct: 374 QELVDELMSIF 384
>AT1G62085.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22948757-22950142 REVERSE
LENGTH=461
Length = 461
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 127/246 (51%), Gaps = 12/246 (4%)
Query: 53 SFTITYFTDNCGFSHQAALKASNRVRFDEPKKPDSVIAFFTNHGFSISQIHNIIGRLPEL 112
SF+++Y D+ G + A S +V F++ PDSV++ +HGF+ SQI +II P+L
Sbjct: 55 SFSVSYLVDSLGLPKKVAESISKKVSFEDKGNPDSVLSLLRSHGFTDSQISSIITDYPQL 114
Query: 113 LVFDPTKTLLPKFQFLASKG---SDIVTTVTRYPYFLRQSLEHYIIPAFEFVRTFSPSD- 168
LV D K++ PK QFL S+G S++ V+ P L + + I ++FV+ +D
Sbjct: 115 LVADAEKSIGPKLQFLQSRGASRSELTHIVSTVPEILGKRGDKTISIYYDFVKEIIEADK 174
Query: 169 ----EKAIACVLFGSNTITIDHMKSKVNLLLDMGLSPSNIY-LLFRISPTILRFADLKEA 223
EK + GS ++ V +L ++G+ ++ LL + + +E+
Sbjct: 175 SSKFEKLCHSLPEGSKQ---ENKIRNVLVLRELGVPQRLLFPLLISDHQPVCGKENFEES 231
Query: 224 VEEVKGLGFHPSKSLFVVALQAKRAVSKSLWDAKLDAFKTWGWSEDDVLDAFRRDPHIMT 283
+++V +GF P+ S FV AL+ +AK++ K+ G+S DV F++ P +
Sbjct: 232 LKKVVEMGFDPTTSKFVKALRVVYRFRDKTIEAKVNVCKSLGFSVGDVWAMFKKCPSFLN 291
Query: 284 YSIKKV 289
+S K+
Sbjct: 292 FSENKI 297
>AT1G61960.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22902239-22903612 FORWARD
LENGTH=457
Length = 457
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 127/247 (51%), Gaps = 13/247 (5%)
Query: 52 QSFTITYFTDNCGFSHQAALKASNRVRFDEPKKPDSVIAFFTNHGFSISQIHNIIGRLPE 111
+FT++Y D+ G + + A S +V F+E + PDSV++ T++GF+ SQI +II P
Sbjct: 51 NNFTVSYLVDSLGLTTKLAESISKKVSFEERRNPDSVLSLLTSYGFTKSQISSIITIYPR 110
Query: 112 LLVFDPTKTLLPKFQFLASKG---SDIVTTVTRYPYFLRQSLEHYIIPAFEFVRTFSPSD 168
LL D K++ PK Q L S+G S++ V+ P L + I ++FV+ +D
Sbjct: 111 LLALDAEKSIAPKLQSLQSRGASSSELTQIVSTVPKILGKRGHKSITVYYDFVKDIIEAD 170
Query: 169 -----EKAIACVLFGSNTITIDHMKSKVNLLLDMGLSPSNIY-LLFRISPTILRFADLKE 222
EK G+ I + +++L ++G++ ++ LL + +E
Sbjct: 171 KSSSYEKLCHSFPQGNKKNKIRN----ISVLRELGVAQRLLFPLLISDGQPVCGKERFEE 226
Query: 223 AVEEVKGLGFHPSKSLFVVALQAKRAVSKSLWDAKLDAFKTWGWSEDDVLDAFRRDPHIM 282
++++V +GF P + FV AL+ +S + K++ +K G+ DV F++ P +
Sbjct: 227 SLKKVVEMGFDPETTKFVEALRVIYRMSDKTIEEKVNVYKRLGFGVADVWAIFKKWPSFL 286
Query: 283 TYSIKKV 289
+YS KK+
Sbjct: 287 SYSEKKI 293
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 8/181 (4%)
Query: 187 MKSKVNLLLDMGLSPSNIYLLFRISPTILRFADLK--EAVEEVKGLGFHPSKSLFVVALQ 244
++ KVN+ +G ++++ +F+ P+ L +++ K E +K G + L ++
Sbjct: 258 IEEKVNVYKRLGFGVADVWAIFKKWPSFLSYSEKKITHTFETLKSCGLLKHEVLLLLKKH 317
Query: 245 AKRAVSKSLWDAK-LDAFKTWGWSEDDVLDAFRRDPHIMTYSIKKVNAVMSFWVDHLGWD 303
K S ++ F G+S D+ +R P + Y+ + V F V ++ W
Sbjct: 318 PKCICSSEQKIVNSIETFLGLGFSRDEFAMMVKRYPQCIDYTAETVKKKTEFIVKNMNWP 377
Query: 304 PSVLLAVPSLFGYSLEKRLRPRASVVQYLLSRGLRKKDASLIKP----FMLTEKLFLQKF 359
L+++P +FGYSLEKR PR +V++ L+S+GL KD S P T++ FL+++
Sbjct: 378 LEALVSIPQVFGYSLEKRTVPRCNVIKTLISKGLM-KDGSEAPPMSSVLTSTDQAFLRRY 436
Query: 360 V 360
V
Sbjct: 437 V 437
>AT5G64950.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:25953887-25955062 FORWARD
LENGTH=391
Length = 391
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 155/336 (46%), Gaps = 16/336 (4%)
Query: 56 ITYFTDNCGFSHQAALKASNRV-RFDEPKKPDSVIAFFTNHGFSISQIHNIIGRLPELLV 114
+ + DN GF A+ + R ++P SVI ++ FS +QI I P ++
Sbjct: 42 VEFLRDN-GFQKPLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMF 100
Query: 115 FDPTKTLLPKFQF---LASKGSDIVTTVTRYPYFLRQSLEHYIIPAFEFVRTFSPSDEKA 171
++ K L PK +F + GS + V++ + SL +IP E +++ +
Sbjct: 101 YNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHED 160
Query: 172 IACVLFGSNTITIDH-----MKSKVNLLLDMGLSPSNIYLLFRISPTILRFAD--LKEAV 224
+ +L + + + ++ L G+ S + L R P I ++ L+ V
Sbjct: 161 LPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYV 220
Query: 225 EEVKGLGFHPSKSLFVVALQAKRAVSKSLWDAKLDAFKTWGWSEDDVLDAFRRDPHIMTY 284
LGF + + V A+ + ++S+ +D K+ F G+SED++ D RR P ++
Sbjct: 221 SRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRC 280
Query: 285 SIKKVNAVMSFWVDHLGWDPSVLLAVPSLFGYSLEKRLRPRASVVQYL----LSRGLRKK 340
S K+ F++ +G + L P + Y+LEKR+ PR V+Q L L KK
Sbjct: 281 SEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKK 340
Query: 341 DASLIKPFMLTEKLFLQKFVECFEEEETSKLLSLYQ 376
+++ +TE+ FL+K+V F +E +LL Y+
Sbjct: 341 KKNMVGIVEMTEEAFLEKYVVRFGDEIAEELLVAYK 376
>AT1G62150.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22970198-22971589 REVERSE
LENGTH=463
Length = 463
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 172/412 (41%), Gaps = 83/412 (20%)
Query: 48 SSDKQSFTITYFTDNCGFSHQAALKASNRVRFDEPKKPDSVIAFFTNHGFSISQIHNIIG 107
S +FT++Y D+ G + + A S +V F+ PD+V+ +H F+ SQI +II
Sbjct: 53 SRKGNNFTVSYLVDSLGLASKLAESISMKVSFENKGNPDTVLNLLRSHEFTDSQISSIIS 112
Query: 108 RLPELLVFDPTKTLLPKFQFLASKG---SDIVTTVTRYPYFLRQSLEHYIIPAFEFVRTF 164
P LLV D +L PK + S+G S++ V++ P L + I ++ V+
Sbjct: 113 DYPTLLVADAENSLGPKLLLMQSRGASSSELTEIVSKVPKILGMKGDKSIGRYYDIVKEI 172
Query: 165 SPSD-----EKAIACVLFGSNTITIDHMKSKVNLLLDMGLSPSNIY-LLFRISPTILRFA 218
+D EK + GS ++ V +L D+G+ ++ LLF
Sbjct: 173 IEADKSSKFEKLCHSLPEGSKQ---ENKIRNVLVLRDLGVPQRLLFSLLFSNHHVCCGKE 229
Query: 219 DLKEAVEEVKGLGFHPSKSLFVVALQAKRAVS------------------KSLWD----- 255
+E++ +V G+GF P+ FV AL +S +W+
Sbjct: 230 KFEESLNKVVGMGFDPTTPKFVEALCIVYGLSDKRLEENFNVYKRFGLTVNDVWELFKKC 289
Query: 256 ------------AKLDAFKTWGWSEDDVLDAFRRDPHIMTYSIKKV-NAVMSFWVDHLGW 302
+A K G ED+VL F+++P + S +++ N++ +F
Sbjct: 290 PAFLGYSENRIIQTFEALKRCGLCEDEVLSVFKKNPLCLRASEQQILNSMETFIGLGFSR 349
Query: 303 DPSVLL--AVPSLFGYS--------------------------------LEKRLRPRASV 328
D V++ +P GYS +EKR PR +V
Sbjct: 350 DEFVMMVKCLPQCIGYSAEMVKKKTEFVVKKMNWPLKVITLFPQVLGYSMEKRTVPRCNV 409
Query: 329 VQYLLSRGLRKKD-ASLIKPFMLTEKLFLQKFVECFEEEETSKLLSLYQGGR 379
++ L+S+GL + + T++ FL+++V +E+ +L+S++ R
Sbjct: 410 IKALMSKGLLGSELPPMASVLACTDQTFLKRYVVEHDEKLVLELMSIFNQDR 461
>AT1G62110.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22958094-22959482 REVERSE
LENGTH=462
Length = 462
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 130/249 (52%), Gaps = 8/249 (3%)
Query: 52 QSFTITYFTDNCGFSHQAALKASNRVRFDEPKKPDSVIAFFTNHGFSISQIHNIIGRLPE 111
++FT++Y D+ G + + A S +V F PD V++ F ++GF+ SQI +II P
Sbjct: 51 KNFTVSYLVDSLGLATKLAESISKKVSFVNKGNPDLVLSLFRSYGFTNSQISSIITDYPR 110
Query: 112 LLVFDPTKTLLPKFQFLASKGS---DIVTTVTRYPYFLRQSLEHYIIPAFEFVRTFSPSD 168
LL+ D K+L K QFL S+G+ ++ V+ P L + ++FV+ +D
Sbjct: 111 LLLIDAEKSLDIKLQFLESRGASSPELTQIVSTVPKILGMKEGKSLGRYYDFVKEIIEAD 170
Query: 169 EKA---IACVLFGSNTITIDHMKSKVNLLLDMGLSPSNIY-LLFRISPTILRFADLKEAV 224
+ + C + +++ V++L D+G+ ++ LL + + + +E++
Sbjct: 171 KSSKYETLCQPLPEANRQGNKIRN-VSVLRDLGVPQKLLFSLLISDAQPVCGKENFEESL 229
Query: 225 EEVKGLGFHPSKSLFVVALQAKRAVSKSLWDAKLDAFKTWGWSEDDVLDAFRRDPHIMTY 284
++V +GF P+ S FV AL+A + + +++ +K +G++ +DV F++ P+ +
Sbjct: 230 KKVVEMGFDPTTSKFVQALRAVYRFTDKTIEERVNVYKGFGFAVEDVWAMFKKCPYFLNS 289
Query: 285 SIKKVNAVM 293
S KK+ +
Sbjct: 290 SEKKIGQTI 298
>AT1G62010.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22915886-22917133 FORWARD
LENGTH=415
Length = 415
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 162/348 (46%), Gaps = 53/348 (15%)
Query: 78 RFDEPKKPDSVIAFFTNHGFSISQIHNIIGRLPELLVFDPTKTLLPKFQFLASKG---SD 134
+ + DSV+ ++GF+ SQI +II +L+ + +L K QFL S+G S+
Sbjct: 63 KLTDKGNSDSVLDLLRSYGFTDSQISSIIRSDSRVLIDNDATSLGSKLQFLQSRGASSSE 122
Query: 135 IVTTVTRYPYFLRQSLEHYIIPAFEFVRTFSPSDEKA----IACVLFGSNTITIDHMKSK 190
+ V+ P L + + ++F++ +D+ + I+ L N I
Sbjct: 123 LTEVVSTVPKILGKREGKSLSRYYDFIKVIIEADKSSKYEKISHSLAQGNKI------RN 176
Query: 191 VNLLLDMGLSPSNIYLLFRISPT--ILRFADLKEAVEEVKGLGFHPSKSLFVVALQAKRA 248
+ +L ++G+ P LL IS + + ++++V +GF P+ S FV AL
Sbjct: 177 ILVLRELGV-PQKRLLLLLISKSQPVCGKEKFDASLKKVVEMGFDPTTSTFVHALHMLYQ 235
Query: 249 VSKSLWDAKLDAFKTWGWSEDDVLDAFRRDPHIMTYSIKKV-NAVMS------------- 294
+S + K+ +++ G+S DDV F++ P +T+S KKV N++ +
Sbjct: 236 MSDKTIEEKIRVYRSVGFSVDDVWAMFKKWPRSLTHSEKKVANSIETFLGLGFSRDVFMM 295
Query: 295 ---------------------FWVDHLGWDPSVLLAVPSLFGYSLEKRLRPRASVVQYLL 333
F V + W + ++P + GYSLEKR PR +V++ L+
Sbjct: 296 MFKRFPPCIGYSTEAVKKKTEFLVKEMNWPVKAVASIPQVLGYSLEKRTVPRCNVIKVLM 355
Query: 334 SRGLRKKDASLIKPFML-TEKLFLQKFVECFEEEE-TSKLLSLYQGGR 379
S+GL + + + + T + FL +V ++++ ++L++++ G R
Sbjct: 356 SKGLLESELPPMSSVLTSTSESFLNLYVSKHDDKQLVAELMAIFTGNR 403
>AT5G23930.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:8074625-8075998 REVERSE
LENGTH=457
Length = 457
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 118/244 (48%), Gaps = 11/244 (4%)
Query: 51 KQSFTITYFTDNCGFSHQAALKASNRVRFDEPKKPDSVIAFFTNHGFSISQIHNIIGRLP 110
+++FT++Y D+ G + + A S + FDE PDSV+ ++GF SQI +II P
Sbjct: 53 RKTFTVSYLIDSLGLTTKLAESISMKANFDEKGNPDSVLKLLRSYGFKDSQISSIISTYP 112
Query: 111 ELLVFDPTKTLLPKFQFLASKG---SDIVTTVTRYPYFLRQSLEHYIIPAFEFVRTFSPS 167
L+ +P KTL K FL G S++ V++ P L + +I +++V+
Sbjct: 113 RFLIENPEKTLRAKLHFLKLNGASSSELTEIVSKVPKILGKRGGKWISHYYDYVKEI-LQ 171
Query: 168 DEKAIACVLFGSNTITIDHMKSKVNLLLDMGLSPSNIYLLFRISPT--ILRFADLKEAVE 225
D+ + + T + V++L +G+ P + L IS + +E+V+
Sbjct: 172 DQDSSSSSSKRKQT----NRNRNVSVLRKLGV-PQRLLLNLLISRAKPVCGKERFEESVK 226
Query: 226 EVKGLGFHPSKSLFVVALQAKRAVSKSLWDAKLDAFKTWGWSEDDVLDAFRRDPHIMTYS 285
++ +GF P FV AL +S + K++A+ G S ++V F++ P + YS
Sbjct: 227 KIVEMGFDPKSPKFVNALYVFYELSDKTIEEKVNAYIRLGLSVNEVWAVFKKWPFSLKYS 286
Query: 286 IKKV 289
K +
Sbjct: 287 EKNI 290
>AT1G62490.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:23130405-23131533 REVERSE
LENGTH=334
Length = 334
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 115/247 (46%), Gaps = 38/247 (15%)
Query: 48 SSDKQSFTITYFTDNCGFSHQAALKASNRVRFDEPKKPDSVIAFFTNHGFSISQIHNIIG 107
S ++FT++Y D+ G + A S + RF++ PDSV++ +HGF++SQI
Sbjct: 93 SQKGKNFTVSYLVDSLGLPKKLAESISKKFRFEDKANPDSVLSLLRSHGFTVSQIS---- 148
Query: 108 RLPELLVFDPTKTLLPKFQFLASKGSDIVTTVTRYPYFLRQSLEHYIIPAFEFVRTFSPS 167
+P+LL G T++ Y F+++SLE +E +
Sbjct: 149 -IPKLL------------------GKRGHKTLSLYYDFVKESLEADKSSKYETL------ 183
Query: 168 DEKAIACVLFGSNTITIDHMKSKVNLLLDMGLSPSNIY-LLFRISPTILRFADLKEAVEE 226
C F + ++ K V++L ++G+ ++ LL + + ++++
Sbjct: 184 ------CQSFPQGNL--ENKKRNVSVLRELGMPHKLLFPLLISVGQPVCGKDRFNTSLKK 235
Query: 227 VKGLGFHPSKSLFVVALQAKRAVSKSLWDAKLDAFKTWGWSEDDVLDAFRRDPHIMTYSI 286
V +GF P+ + FV AL ++ + K++ +K G++ +DV F++ P+ + YS
Sbjct: 236 VVEMGFDPTTAKFVKALHVSYEMNDKTIEEKVNVYKMLGFAVEDVWVIFKKWPYSLKYSE 295
Query: 287 KKVNAVM 293
+K+ +
Sbjct: 296 EKITQTI 302
>AT5G54180.1 | Symbols: PTAC15 | plastid transcriptionally active 15
| chr5:21988544-21990183 FORWARD LENGTH=500
Length = 500
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 122/286 (42%), Gaps = 48/286 (16%)
Query: 95 HGFSISQIHNIIGR--LPELLVFDPTKTLLPKFQFLASKGSDIVTTVTRYPYFLRQSLEH 152
HG +I +++ + L +LL + + FL G + + R P L L+
Sbjct: 191 HGIPKEKISHVLNKVYLNKLLYQKSVEDIERLISFLEPFGG--IGIIARRPVILNSDLDS 248
Query: 153 YIIPAFEFVRTFSPSDEKAIACVLFGSNTI---TIDHMKSKVNLLLDM-GLSPSNIYLLF 208
+IP +F+R S D+ A VL I +++HM +V L GL+ ++ +
Sbjct: 249 QLIPRVDFIRNLSGEDDFATGTVLRRLPAILSYSVEHMNGQVEFLKSFAGLTSEQVFKIV 308
Query: 209 RISPTILRFAD---LKEAVEEVKGLGFHP-------SKSLFVVALQ-------------- 244
+ P ++ + L+ +E +K GF SK+ ++AL
Sbjct: 309 HVFPNVISTSKERKLRPRIEFLKECGFDSPGMFKFLSKAPLILALSENNLSHKLGFLVKI 368
Query: 245 -----------AKRAVSKSLWDAK---LDAFKTWGWSEDDVLDAFRRDPHIMTYSIKKVN 290
A AV+++ D + + ++G S +D+L + P ++ Y+ +
Sbjct: 369 GYKHRTKELAFAMGAVTRTSSDNMQRVIGLYLSYGLSFEDILAMSTKHPQVLQYNYTSLE 428
Query: 291 AVMSFWVDHLGWDPSVLLAVPSLFGYSLEKRLRPRASVVQYLLSRG 336
+ + ++++G + LLA P+ GY L+ R++ R + L SRG
Sbjct: 429 EKLEYLIEYMGREVEELLAFPAFLGYKLDSRIKHRYE--EKLKSRG 472
>AT1G79220.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:29799227-29800426 FORWARD
LENGTH=399
Length = 399
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 94/198 (47%), Gaps = 3/198 (1%)
Query: 185 DHMKSKVNLLLDMGLSPSNIYLLFRISPTILRFADLK-EAVEEVKGLGFHPSKSLFVVAL 243
D +K + +G S ++ + PT++ + E E ++ G +F
Sbjct: 183 DKIKPAIEYYKGLGFSQQDLVAMLISRPTLIPRTNFNNEKFEYIEKTGVTRESKMFKYVA 242
Query: 244 QAKRAVSKSLWDAKLDAFKTWGWSEDDVLDAFRRDPHIMTYSIKKVNAVMSFWVDHLGWD 303
+ K+ + +G+SE+++ + + P +++ S++KV M+F + +
Sbjct: 243 VIIGVSRMETIEEKVRNLEKFGFSEEEIWHLYGKCPILLSLSVEKVQRNMTFVIASMKLP 302
Query: 304 PSVLLAVPSLFGYSLEKRLRPRASVVQYLLSRGLRK--KDASLIKPFMLTEKLFLQKFVE 361
++ P L +LE RL+PRA +V+ +L L+ K+ S+ + ++EK FL+ +V
Sbjct: 303 AHSVVKHPCLLLLNLESRLKPRADLVKRVLEMRLKPLIKEVSIFRAVRMSEKRFLKVYVM 362
Query: 362 CFEEEETSKLLSLYQGGR 379
C ++ ++L+ Y+ +
Sbjct: 363 CHPQDIATELMEFYEKSK 380
>AT1G74120.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:27871923-27873260 REVERSE
LENGTH=445
Length = 445
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 40/217 (18%)
Query: 186 HMKSKVNLLLDMGLSPSNIYLLFRISPTILRFAD---LKEAVEEVKGLGFH--------- 233
++ K+ L+ +G++ NI F + P +L LK ++E +GF
Sbjct: 181 EIRRKIEFLVGIGIARDNIERFFHVFPEVLGIGTETRLKPLLDEFMKMGFSKDDVKKEIA 240
Query: 234 -------------PSKSLFVVALQAKRAVSKSL---------WDAKL--DAFKTWGWSED 269
P + L+ + + S+ ++ KL D +G
Sbjct: 241 REPRVLGLELGELPRCLELINTLKCREVIRVSIISEGAFRAGFEVKLRVDCLCKYGLIRR 300
Query: 270 DVLDAFRRDPHIMTYSIKKVNAVMSFWVDHLGWDPSVLLAVPSLFGYSLEKRLRPRASVV 329
D ++P ++ Y I+ + + F + +G+ + L VP G +L+K++ PR +V+
Sbjct: 301 DAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHINCLADVPEYLGVNLQKQIVPRYNVI 360
Query: 330 QYLLSRGLRKKD---ASLIKPFMLT-EKLFLQKFVEC 362
YL +G D LIKP M L++ + EC
Sbjct: 361 DYLKLKGGLGCDIGLKGLIKPSMKRFYNLYVMPYPEC 397
>AT2G44020.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr2:18217737-18219260 REVERSE
LENGTH=507
Length = 507
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 108/271 (39%), Gaps = 32/271 (11%)
Query: 88 VIAFFTNHGFSISQIHNIIGRLPELLVFDPTKTLLPKFQFLASKG---SDIVTTVTRYPY 144
V+ F + ++ + PELL F T+ +L S G DI VT+YPY
Sbjct: 183 VVKFLRGLDVEKQDLGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPY 242
Query: 145 FLRQSLEHYIIPAFEFVRTFSPSDEKAIACVLFGSNTITIDH-----MKSKVNLLLDMGL 199
L + I P +++ S K I + + + + +K V+ L+ G+
Sbjct: 243 LLGMRVGTMIKPLVDYL--ISIGLPKKIVARMLEKRSYIVGYNLEETVKPNVDCLISFGV 300
Query: 200 SPSNIYLLFRISPTILR------------FADLKEAVEEVKGLGFHPSKSLFVVALQAKR 247
+ LL P IL F LK ++ +G K +V+L+ +
Sbjct: 301 KKELLPLLIAQYPQILGLPVKAKMSTQQYFFSLKLKIDP-EGFARVVEKMPQIVSLK-QN 358
Query: 248 AVSKSLWDAKLDAFKTWGWSEDDVLDAFRRDPHIMTYSIKKVNAVMSFWVDHLGWDPSVL 307
+ K + AF+ +D+ R P I+ ++ + F+ +G L
Sbjct: 359 VIMKPIEFLLGRAFQV-----EDIAKMVVRCPQILCSRVELMKNSYYFYKTEMGRPMKEL 413
Query: 308 LAVPSLFGYSLEKRLRPRASVVQYLLSRGLR 338
+ P F YSLE R++PR Q L S+G+R
Sbjct: 414 VEYPEYFTYSLESRIKPRY---QKLQSKGIR 441