Miyakogusa Predicted Gene
- Lj0g3v0363189.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0363189.1 Non Chatacterized Hit- tr|I3SXJ5|I3SXJ5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,61.66,0,Mitochondrial termination factor repeats,Mitochodrial
transcription termination factor-related; mTER,CUFF.25018.1
(387 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G07900.1 | Symbols: | Mitochondrial transcription terminatio... 202 2e-52
AT1G21150.1 | Symbols: | Mitochondrial transcription terminatio... 168 5e-42
AT1G61970.2 | Symbols: | Mitochondrial transcription terminatio... 152 5e-37
AT1G61970.1 | Symbols: | Mitochondrial transcription terminatio... 152 5e-37
AT1G61980.1 | Symbols: | Mitochondrial transcription terminatio... 149 3e-36
AT1G61990.1 | Symbols: | Mitochondrial transcription terminatio... 143 2e-34
AT1G62120.1 | Symbols: | Mitochondrial transcription terminatio... 141 1e-33
AT1G62150.1 | Symbols: | Mitochondrial transcription terminatio... 118 7e-27
AT3G46950.1 | Symbols: | Mitochondrial transcription terminatio... 115 5e-26
AT5G64950.1 | Symbols: | Mitochondrial transcription terminatio... 111 7e-25
AT1G62010.1 | Symbols: | Mitochondrial transcription terminatio... 110 2e-24
AT1G56380.2 | Symbols: | Mitochondrial transcription terminatio... 103 3e-22
AT1G56380.1 | Symbols: | Mitochondrial transcription terminatio... 103 3e-22
AT1G62085.1 | Symbols: | Mitochondrial transcription terminatio... 101 8e-22
AT1G61960.1 | Symbols: | Mitochondrial transcription terminatio... 99 5e-21
AT1G62110.1 | Symbols: | Mitochondrial transcription terminatio... 94 1e-19
AT5G23930.1 | Symbols: | Mitochondrial transcription terminatio... 81 1e-15
AT1G79220.1 | Symbols: | Mitochondrial transcription terminatio... 68 1e-11
AT1G74120.1 | Symbols: | Mitochondrial transcription terminatio... 55 9e-08
AT5G06810.1 | Symbols: | Mitochondrial transcription terminatio... 50 3e-06
>AT5G07900.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:2520188-2521405 FORWARD
LENGTH=405
Length = 405
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 189/340 (55%), Gaps = 7/340 (2%)
Query: 49 DKQSFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRT 108
K SFT++Y +CG S +A AS+++L + +P++V+ +HGFT +Q +++ +
Sbjct: 66 QKLSFTLNYLIDSCGLSPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKR 125
Query: 109 PELLLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRRFFT 168
P LLL + + LLPK F S G S S + T+ P L ++L Q++P++ ++
Sbjct: 126 PVLLLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLD 185
Query: 169 SDQKAIACVIACPTAISDDR---VVPNLNLLIDLGVSPSNINNLFRTRPSIL--SSGDLG 223
SD+K +A + +D +VPN+N + + GV I L P + + +
Sbjct: 186 SDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQ 245
Query: 224 SAVEEVKGYGFDPSKTLFSVALLAKRAMA-KSQWDTKVDALKKWGWSEDTVVDAFRRQPS 282
+ ++ + GF+P K+ F +A+ A KS WD + ++WGWSED ++ AF++ P
Sbjct: 246 AIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPH 305
Query: 283 IMLRSTEKLNAVMNLWVDQLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLSKGLMKK 342
M+ S K+N M +V+++ ++ P++ +SLEKRIIPR SV K L+S GL+K+
Sbjct: 306 CMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKE 365
Query: 343 EASLTTPFGLTDELFLQKFVNCFEKEETSRLLRLYQGACK 382
+ SLT+ +++FL+K V +E EE L+ LY G K
Sbjct: 366 DWSLTSLLVPVEKVFLEKLVIKYE-EELPELMNLYLGCTK 404
>AT1G21150.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:7406406-7407578 REVERSE
LENGTH=390
Length = 390
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 165/324 (50%), Gaps = 6/324 (1%)
Query: 51 QSFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPE 110
+SFTVSY +CG S ++A S+ V + KPDSV+ F +HGFT Q +VI P
Sbjct: 55 ESFTVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPR 114
Query: 111 LLLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRRFFTSD 170
+L P + PK F +S G S SD + SP+ L +L K+++P +++++ +
Sbjct: 115 VLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEE 174
Query: 171 QKAIACV---IACPTAISDDRVVPNLNLLIDLGVSPSNINNLFRTRPSILSSGD--LGSA 225
+ + C+ I C + V +++ +LGV +I L + P S +
Sbjct: 175 ESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEV 234
Query: 226 VEEVKGYGFDPSKTLFSVALLAKRAMAKSQWDTKVDALKKWGWSEDTVVDAFRRQPSIML 285
+ V YGFDP K F A++A ++S + K + +GWS++ V A R P+ +
Sbjct: 235 LNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVT 294
Query: 286 RSTEKLNAVMNLWVDQLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLSKGLMKKE-A 344
S EK+ + V+ +G ++A P++ S+EKRI PR V+ LLSKGL+KKE
Sbjct: 295 VSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDI 354
Query: 345 SLTTPFGLTDELFLQKFVNCFEKE 368
+ T L F+ KFV ++ E
Sbjct: 355 NYFTILKLKSSEFMDKFVLKYQDE 378
>AT1G61970.2 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22904713-22905969 FORWARD
LENGTH=418
Length = 418
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 176/369 (47%), Gaps = 42/369 (11%)
Query: 52 SFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPEL 111
+FTVSY + G + + A S++V F D N PDSV+ T+HGFT SQ +I P+L
Sbjct: 52 NFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQL 111
Query: 112 LLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIR-RFFTSD 170
L+ D L PK QFL S+GAS S+I V P L K K I ++ I+
Sbjct: 112 LIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKS 171
Query: 171 QKAIACVIACPTAISDDRVVPNLNLLIDLGVSPSNINNLF--RTRPSILSSGDLGSAVEE 228
K + P ++++ N+++L +LG+ + +L ++P + +++
Sbjct: 172 SKNEKLCHSLPQGNLENKI-RNVSVLRELGMPHKLLFSLLISDSQP-VCGKEKFEETLKK 229
Query: 229 VKGYGFDPSKTLFSVALLAKRAMAKSQWDTKVD--------------ALKKW-------- 266
V GFDP+ + F AL M + + KV + KKW
Sbjct: 230 VVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSE 289
Query: 267 -------------GWSEDTVVDAFRRQPSIMLRSTEKLNAVMNLWVDQLGWDTSALLAAP 313
G+S D + P + STE + V ++ W A+++ P
Sbjct: 290 KKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNP 349
Query: 314 IIFGYSLEKRIIPRASVVKYLLSKGLMKKE-ASLTTPFGLTDELFLQKFV-NCFEKEETS 371
+FGYSLEKRI+PR +V+K L+SKGLM+ E S++ T ++FL ++V N +K+ +
Sbjct: 350 AVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVT 409
Query: 372 RLLRLYQGA 380
L+ +Y+ +
Sbjct: 410 ELMAIYRAS 418
>AT1G61970.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22904713-22905969 FORWARD
LENGTH=418
Length = 418
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 176/369 (47%), Gaps = 42/369 (11%)
Query: 52 SFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPEL 111
+FTVSY + G + + A S++V F D N PDSV+ T+HGFT SQ +I P+L
Sbjct: 52 NFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQL 111
Query: 112 LLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIR-RFFTSD 170
L+ D L PK QFL S+GAS S+I V P L K K I ++ I+
Sbjct: 112 LIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKS 171
Query: 171 QKAIACVIACPTAISDDRVVPNLNLLIDLGVSPSNINNLF--RTRPSILSSGDLGSAVEE 228
K + P ++++ N+++L +LG+ + +L ++P + +++
Sbjct: 172 SKNEKLCHSLPQGNLENKI-RNVSVLRELGMPHKLLFSLLISDSQP-VCGKEKFEETLKK 229
Query: 229 VKGYGFDPSKTLFSVALLAKRAMAKSQWDTKVD--------------ALKKW-------- 266
V GFDP+ + F AL M + + KV + KKW
Sbjct: 230 VVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSE 289
Query: 267 -------------GWSEDTVVDAFRRQPSIMLRSTEKLNAVMNLWVDQLGWDTSALLAAP 313
G+S D + P + STE + V ++ W A+++ P
Sbjct: 290 KKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNP 349
Query: 314 IIFGYSLEKRIIPRASVVKYLLSKGLMKKE-ASLTTPFGLTDELFLQKFV-NCFEKEETS 371
+FGYSLEKRI+PR +V+K L+SKGLM+ E S++ T ++FL ++V N +K+ +
Sbjct: 350 AVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVT 409
Query: 372 RLLRLYQGA 380
L+ +Y+ +
Sbjct: 410 ELMAIYRAS 418
>AT1G61980.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22908162-22909418 FORWARD
LENGTH=418
Length = 418
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 179/370 (48%), Gaps = 42/370 (11%)
Query: 51 QSFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPE 110
+SFTVSY + G + A S++V F D + PDSV+ +HGFT SQ ++ P+
Sbjct: 51 KSFTVSYLVDSLGLPKKLAESVSRKVSFEDKDNPDSVLNLLRSHGFTDSQISTIVTDYPQ 110
Query: 111 LLLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRR-FFTS 169
LL+ D L PK QFL S+GAS S++ V P+ L K K I ++ I+
Sbjct: 111 LLVADAEKSLAPKLQFLQSRGASSSELTEIVSTVPKILGKRGHKTISVFYDFIKETLLDK 170
Query: 170 DQKAIACVIACPTAISDDRVVPNLNLLIDLGVSPSNI--NNLFRTRPSILSSGDLGSAVE 227
K+ P +++ + NL++L +LG+ P + L + +++
Sbjct: 171 SSKSEKSCQPFPQGNLENK-IRNLSVLRELGM-PHKLLFPLLISCDVPVFGKEKFEESLK 228
Query: 228 EVKGYGFDPSKTLFSVALLAKRAMAKSQWDTKVDALKKWGWSEDTVVDAFRRQPSIMLRS 287
+V GFDPS + F AL + ++ + KV+A K+ G+ + V F+R P+ + S
Sbjct: 229 KVVEMGFDPSTSKFVEALCVVQRLSDKNIEDKVNAYKRLGFDVEYVWTVFKRWPNFLTHS 288
Query: 288 TEK------------------------------LNAVM-----NLWVDQLGWDTSALLAA 312
+K L+A M V ++ W AL++
Sbjct: 289 EKKILNTIETFLGLGFSRDEFSVLIKRFPQGIGLSAEMVKKKTEFLVKKMNWPLKALVSN 348
Query: 313 PIIFGYSLEKRIIPRASVVKYLLSKGLMKKE-ASLTTPFGLTDELFLQKFVNCFE-KEET 370
P + GYSLEKR +PR +VV+ L+SKGL+ E S++ F TD++FL ++V E K+
Sbjct: 349 PAVLGYSLEKRTVPRGNVVQALISKGLIGSELPSISRVFVCTDQVFLNRYVKRHEDKQLE 408
Query: 371 SRLLRLYQGA 380
+ L+ +Y+ +
Sbjct: 409 TELMAIYRAS 418
>AT1G61990.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22911453-22912697 FORWARD
LENGTH=414
Length = 414
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 173/351 (49%), Gaps = 46/351 (13%)
Query: 51 QSFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPE 110
++FTVSY + G S + A S++V F D PDSV++ F ++GFT SQ +I P
Sbjct: 51 KNFTVSYLVDSLGLSKKLAESISRKVSFEDKVNPDSVLSLFRSYGFTDSQISTIITDYPL 110
Query: 111 LLLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRRFFTSD 170
LL+ D L K Q L S+GAS S+I V PR L K K I ++A++ +D
Sbjct: 111 LLVADAKKALGRKLQILQSRGASSSEITEIVSTVPRILGK---KSITVYYDAVKDIIVAD 167
Query: 171 QKAIACVIACPTAISDDRVVPNLNLLIDLGVSPSNINNLFRTRPS-ILSSGDLGSAVEEV 229
+ P ++ + N++ L +LG+ + L ++ + + +++++V
Sbjct: 168 T---SSSYELPQGSQGNK-IRNVSALRELGMPSRLLLPLLVSKSQPVCGKENFDASLKKV 223
Query: 230 KGYGFDPSKTLFSVALLAKRAMAKSQWDTKVDALKKWGWSEDTVVDAFRRQPSIMLRSTE 289
GFDP+ T F +AL M++ + KV + G++ D V + F++ PS++ S +
Sbjct: 224 VEMGFDPTTTKFVLALRMLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKKTPSVLKVSKK 283
Query: 290 KLNAVMNLWVD-----------------------------------QLGWDTSALLAAPI 314
K+ ++D ++ W +AL+ P
Sbjct: 284 KILKSAETFLDLGYSRAEFLMMVKRYPPCIEYSVESVKKKNEFLVKKMKWPRNALVLHPQ 343
Query: 315 IFGYSLEKRIIPRASVVKYLLSKGLMKKEASL---TTPFGLTDELFLQKFV 362
+FGYS+EKRIIPR ++++ LLSKGL++K + L ++ TDE FL ++V
Sbjct: 344 VFGYSMEKRIIPRCNILEALLSKGLLRKGSELPAVSSVLSCTDEGFLDRYV 394
>AT1G62120.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22960326-22961639 REVERSE
LENGTH=437
Length = 437
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 179/379 (47%), Gaps = 50/379 (13%)
Query: 51 QSFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPE 110
+FTVSY + G + + A S +V F++ PDSV++ +HGFT SQ N+I P
Sbjct: 55 HNFTVSYLVDSLGLATKVAESISMKVSFDNKGNPDSVLSLLRSHGFTDSQISNIIRTFPR 114
Query: 111 LLLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRRFFTSD 170
LL+ D L PK QFL S GAS S++ TV P+ L K K + ++ ++ +D
Sbjct: 115 LLILDAEKSLAPKLQFLQSIGASSSELTETVSAVPKILGKRKGKSLSRYYDFVKVIIEAD 174
Query: 171 Q--KAIACVIACPTAISDDRVVPNLNLLIDLGVSPSNINNLFRTRPSILSSGDL------ 222
+ K + P + + NL +L ++GV + +L I +GD+
Sbjct: 175 KSSKLEKLCHSLPEGSKQENKIRNLLVLREMGVPQRLLFSLL-----ISDAGDVCGKEKF 229
Query: 223 GSAVEEVKGYGFDPSKTLFSVALLAKRAMAKSQWDTKVDALKKWGWSEDTVVDAFRRQPS 282
++++ GFDP+ F AL ++ + K +A K+ G + D V F++ P+
Sbjct: 230 KESLKKAVEIGFDPTTATFVKALNVLYGLSDKGIENKFNACKRLGLAVDDVWAMFKKWPN 289
Query: 283 IMLRSTEKL-NAV----------------------------------MNLWVDQLGWDTS 307
I+ +S +K+ N+V V ++ W
Sbjct: 290 ILTKSEKKIENSVETFLGLGFSRDEFLMMVKRFPQCIGYSTELMKTKTEFLVTEMNWPLK 349
Query: 308 ALLAAPIIFGYSLEKRIIPRASVVKYLLSKGLMKKE-ASLTTPFGLTDELFLQKFVNCF- 365
A+ + P + GYSLEKR +PR +V+K L+SKGL++ E +++ T E+FL +V
Sbjct: 350 AVASIPQVLGYSLEKRTVPRCNVIKVLISKGLLESELPPISSVLTSTSEVFLYMYVRKHD 409
Query: 366 EKEETSRLLRLYQGACKSL 384
+K+ + L+ ++ G SL
Sbjct: 410 DKQLVAELMAIFTGDRVSL 428
>AT1G62150.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22970198-22971589 REVERSE
LENGTH=463
Length = 463
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 163/387 (42%), Gaps = 78/387 (20%)
Query: 52 SFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPEL 111
+FTVSY + G + + A S +V F + PD+V+ +H FT SQ ++I P L
Sbjct: 58 NFTVSYLVDSLGLASKLAESISMKVSFENKGNPDTVLNLLRSHEFTDSQISSIISDYPTL 117
Query: 112 LLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRRFFTSDQ 171
L+ D L PK + S+GAS S++ V + P+ L +K I ++ ++ +D+
Sbjct: 118 LVADAENSLGPKLLLMQSRGASSSELTEIVSKVPKILGMKGDKSIGRYYDIVKEIIEADK 177
Query: 172 --KAIACVIACPTAISDDRVVPNLNLLIDLGVSPSNI--NNLFRTRPSILSSGDLGSAVE 227
K + P + + N+ +L DLGV P + + LF ++
Sbjct: 178 SSKFEKLCHSLPEGSKQENKIRNVLVLRDLGV-PQRLLFSLLFSNHHVCCGKEKFEESLN 236
Query: 228 EVKGYGFDPSKTLFSVALLAKRAMAKSQ------------------WD------------ 257
+V G GFDP+ F AL ++ + W+
Sbjct: 237 KVVGMGFDPTTPKFVEALCIVYGLSDKRLEENFNVYKRFGLTVNDVWELFKKCPAFLGYS 296
Query: 258 -----TKVDALKKWGWSEDTVVDAFRRQPSIMLRSTEK--LNAV---------------- 294
+ALK+ G ED V+ F++ P + LR++E+ LN++
Sbjct: 297 ENRIIQTFEALKRCGLCEDEVLSVFKKNP-LCLRASEQQILNSMETFIGLGFSRDEFVMM 355
Query: 295 ------------------MNLWVDQLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLS 336
V ++ W + P + GYS+EKR +PR +V+K L+S
Sbjct: 356 VKCLPQCIGYSAEMVKKKTEFVVKKMNWPLKVITLFPQVLGYSMEKRTVPRCNVIKALMS 415
Query: 337 KGLMKKE-ASLTTPFGLTDELFLQKFV 362
KGL+ E + + TD+ FL+++V
Sbjct: 416 KGLLGSELPPMASVLACTDQTFLKRYV 442
>AT3G46950.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr3:17289452-17290804 FORWARD
LENGTH=450
Length = 450
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 128/255 (50%), Gaps = 11/255 (4%)
Query: 44 FSTTCDKQS------FTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFT 97
FS+T K S FTVSY + G + + A SK+V F D PDSV+ ++GF
Sbjct: 38 FSSTIAKDSSPKGSTFTVSYLVESLGLTKKLAETISKKVTFEDKVNPDSVLNLLRSNGFK 97
Query: 98 LSQTHNVIGRTPELLLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIV 157
SQ +I P LL+ D L PK QFL S+GAS S+++ V P L K E+ +
Sbjct: 98 DSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSNVPTILDKKGEESVS 157
Query: 158 PAFEAIRRFFTSDQKAIACVIACPTAISDDRVVPNLNLLIDLGVSPSNINNLFRTR-PSI 216
++ ++ Q + I+CP +R + N+++L +LGV + +L +R +
Sbjct: 158 LYYDFVKDIM---QDGKSLCISCPEGKKGNR-IRNISVLRELGVPQKLLFSLLISRYQPV 213
Query: 217 LSSGDLGSAVEEVKGYGFDPSKTLFSVALLAKRAMAKSQWDTKVDALKKWGWSEDTVVDA 276
++++V GFDP+K+ F AL M++ + KV+ K+ G+SE +
Sbjct: 214 CGKEKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEKVNVYKRLGFSEAEIWAI 273
Query: 277 FRRQPSIMLRSTEKL 291
F++ P + S +K+
Sbjct: 274 FKKWPYFLKFSEKKI 288
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 10/186 (5%)
Query: 184 ISDDRVVPNLNLLIDLGVSPSNINNLFRTRPSIL--SSGDLGSAVEEVKGYGFDPSKTLF 241
+S+ + +N+ LG S + I +F+ P L S + E +K G +
Sbjct: 248 MSEKTIEEKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKIILMFETLKKCGLVEEEI-- 305
Query: 242 SVALLAKRAMAKSQWDTKV-DALKKW---GWSEDTVVDAFRRQPSIMLRSTEKLNAVMNL 297
+++L R + K+ D+++ + G+S D +R P S E L +
Sbjct: 306 -ISVLKSRPQCIRSSEQKILDSIEMFLGLGFSRDDFKMMVKRYPCCTAYSGETLRKKFEV 364
Query: 298 WVDQLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLSKGLMKKE-ASLTTPFGLTDEL 356
V + W A++ P + GYSLEKRI+PR++V+K L+SKGL+ E +++ TD+
Sbjct: 365 LVKMMNWPLEAVVMIPTVLGYSLEKRIVPRSNVIKALMSKGLIGSENPPISSVLVCTDQE 424
Query: 357 FLQKFV 362
FL+++V
Sbjct: 425 FLKRYV 430
>AT5G64950.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:25953887-25955062 FORWARD
LENGTH=391
Length = 391
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 159/339 (46%), Gaps = 13/339 (3%)
Query: 55 VSYFKTNCGFSHQAALKASKRVL-FNDANKPDSVITFFTNHGFTLSQTHNVIGRTPELLL 113
V + + N GF A+ + R +P SVI ++ F+ +Q I P ++
Sbjct: 42 VEFLRDN-GFQKPLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMF 100
Query: 114 FDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRRFFTSDQKA 173
++ L PK +F G + S + V ++ + +L K+++P E ++ +
Sbjct: 101 YNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHED 160
Query: 174 IACVIA-CP-TAISDDR---VVPNLNLLIDLGVSPSNINNLFRTRPSI--LSSGDLGSAV 226
+ +++ C +S D ++PN++ L G+ S + +L R +P I LS L V
Sbjct: 161 LPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYV 220
Query: 227 EEVKGYGFDPSKTLFSVALLAKRAMAKSQWDTKVDALKKWGWSEDTVVDAFRRQPSIMLR 286
GF + + A+++ ++++ +D KV G+SED + D RR P ++
Sbjct: 221 SRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRC 280
Query: 287 STEKLNAVMNLWVDQLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYL----LSKGLMKK 342
S +KL ++ ++G + AL P + Y+LEKR+IPR V++ L L KK
Sbjct: 281 SEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKK 340
Query: 343 EASLTTPFGLTDELFLQKFVNCFEKEETSRLLRLYQGAC 381
+ ++ +T+E FL+K+V F E LL Y+ C
Sbjct: 341 KKNMVGIVEMTEEAFLEKYVVRFGDEIAEELLVAYKCVC 379
>AT1G62010.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22915886-22917133 FORWARD
LENGTH=415
Length = 415
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 158/346 (45%), Gaps = 42/346 (12%)
Query: 78 FNDANKPDSVITFFTNHGFTLSQTHNVIGRTPELLLFDPTTKLLPKFQFLASKGASPSDI 137
D DSV+ ++GFT SQ ++I +L+ + T L K QFL S+GAS S++
Sbjct: 64 LTDKGNSDSVLDLLRSYGFTDSQISSIIRSDSRVLIDNDATSLGSKLQFLQSRGASSSEL 123
Query: 138 VTTVIRSPRFLRKNLEKQIVPAFEAIRRFFTSDQKAIACVIACPTAISDDRVVPNLNLLI 197
V P+ L K K + ++ I+ +D+ + I+ A + + N+ +L
Sbjct: 124 TEVVSTVPKILGKREGKSLSRYYDFIKVIIEADKSSKYEKISHSLAQGNK--IRNILVLR 181
Query: 198 DLGVSPSNINNLF--RTRPSILSSGDLGSAVEEVKGYGFDPSKTLFSVALLAKRAMAKSQ 255
+LGV + L +++P + +++++V GFDP+ + F AL M+
Sbjct: 182 ELGVPQKRLLLLLISKSQP-VCGKEKFDASLKKVVEMGFDPTTSTFVHALHMLYQMSDKT 240
Query: 256 WDTKVDA--------------LKKW---------------------GWSEDTVVDAFRRQ 280
+ K+ KKW G+S D + F+R
Sbjct: 241 IEEKIRVYRSVGFSVDDVWAMFKKWPRSLTHSEKKVANSIETFLGLGFSRDVFMMMFKRF 300
Query: 281 PSIMLRSTEKLNAVMNLWVDQLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLSKGLM 340
P + STE + V ++ W A+ + P + GYSLEKR +PR +V+K L+SKGL+
Sbjct: 301 PPCIGYSTEAVKKKTEFLVKEMNWPVKAVASIPQVLGYSLEKRTVPRCNVIKVLMSKGLL 360
Query: 341 KKE-ASLTTPFGLTDELFLQKFVNCF-EKEETSRLLRLYQGACKSL 384
+ E +++ T E FL +V+ +K+ + L+ ++ G SL
Sbjct: 361 ESELPPMSSVLTSTSESFLNLYVSKHDDKQLVAELMAIFTGNRVSL 406
>AT1G56380.2 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:21101327-21102701 FORWARD
LENGTH=399
Length = 399
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 165/362 (45%), Gaps = 48/362 (13%)
Query: 53 FTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPELL 112
TVSY + G + A K V D P+SV+ ++ FT SQ ++I PELL
Sbjct: 28 LTVSYLVDSVGIPIKFAESILKEVSSKDKCNPNSVLNLLRSYDFTDSQISSIITTDPELL 87
Query: 113 LFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRR------- 165
+ D L PK +FL S+ S + V R P+ LR EK ++ ++ ++
Sbjct: 88 MEDAENSLCPKLKFLESREILSSRLNDIVTRVPKILRMEEEKSMITYYDFVKTITLTSSR 147
Query: 166 --FF----------TSDQKAI-------------ACVIACPTAISDDRVVPNLNLLIDLG 200
F+ +S +K I A V+ C +S++ + +N+ LG
Sbjct: 148 SDFYKVCELYPYIESSIRKVIEMGFDPFAPKIFDATVVVC--TLSNETLEERVNIYKTLG 205
Query: 201 VSPSNINNLFRTRPSIL--SSGDLGSAVEEVKGYGFDPSKTLFSVALLAKRAMAKSQWDT 258
++ +F+ P+ L S + + E +K G + + S+ + + + S+ D
Sbjct: 206 FDVRDVWEMFKKCPTFLNISEKKITQSFETLKKCGL-VEEEVISMFQKSPQCIDFSELDI 264
Query: 259 --KVDALKKWGWSEDTVVDAFRRQPSIMLRSTEK-LNAVMNLWVDQLGWDT-------SA 308
+ LK G E+ V+ F+R P + S +K LNAV D
Sbjct: 265 TQNFEFLKGCGLVEEEVLSMFKRYPQCIGFSEKKILNAVETFLGQGFSKDEVMMMVNREG 324
Query: 309 LLAAPIIFGYSLEKRIIPRASVVKYLLSKGLMKKE-ASLTTPFGLTDELFLQKFVNCFEK 367
+++ P++ +S+EK I+PR +V+K L SK L+K E +S+ + DE+FL+++V+ +
Sbjct: 325 VVSIPVVLEFSMEKMIVPRCNVIKALTSKRLLKTEVSSMFSVLICPDEVFLERYVSKHDD 384
Query: 368 EE 369
+E
Sbjct: 385 QE 386
>AT1G56380.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:21101374-21102701 FORWARD
LENGTH=388
Length = 388
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 165/362 (45%), Gaps = 48/362 (13%)
Query: 53 FTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPELL 112
TVSY + G + A K V D P+SV+ ++ FT SQ ++I PELL
Sbjct: 17 LTVSYLVDSVGIPIKFAESILKEVSSKDKCNPNSVLNLLRSYDFTDSQISSIITTDPELL 76
Query: 113 LFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRR------- 165
+ D L PK +FL S+ S + V R P+ LR EK ++ ++ ++
Sbjct: 77 MEDAENSLCPKLKFLESREILSSRLNDIVTRVPKILRMEEEKSMITYYDFVKTITLTSSR 136
Query: 166 --FF----------TSDQKAI-------------ACVIACPTAISDDRVVPNLNLLIDLG 200
F+ +S +K I A V+ C +S++ + +N+ LG
Sbjct: 137 SDFYKVCELYPYIESSIRKVIEMGFDPFAPKIFDATVVVC--TLSNETLEERVNIYKTLG 194
Query: 201 VSPSNINNLFRTRPSIL--SSGDLGSAVEEVKGYGFDPSKTLFSVALLAKRAMAKSQWDT 258
++ +F+ P+ L S + + E +K G + + S+ + + + S+ D
Sbjct: 195 FDVRDVWEMFKKCPTFLNISEKKITQSFETLKKCGL-VEEEVISMFQKSPQCIDFSELDI 253
Query: 259 --KVDALKKWGWSEDTVVDAFRRQPSIMLRSTEK-LNAVMNLWVDQLGWDT-------SA 308
+ LK G E+ V+ F+R P + S +K LNAV D
Sbjct: 254 TQNFEFLKGCGLVEEEVLSMFKRYPQCIGFSEKKILNAVETFLGQGFSKDEVMMMVNREG 313
Query: 309 LLAAPIIFGYSLEKRIIPRASVVKYLLSKGLMKKE-ASLTTPFGLTDELFLQKFVNCFEK 367
+++ P++ +S+EK I+PR +V+K L SK L+K E +S+ + DE+FL+++V+ +
Sbjct: 314 VVSIPVVLEFSMEKMIVPRCNVIKALTSKRLLKTEVSSMFSVLICPDEVFLERYVSKHDD 373
Query: 368 EE 369
+E
Sbjct: 374 QE 375
>AT1G62085.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22948757-22950142 REVERSE
LENGTH=461
Length = 461
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 8/251 (3%)
Query: 52 SFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPEL 111
SF+VSY + G + A SK+V F D PDSV++ +HGFT SQ ++I P+L
Sbjct: 55 SFSVSYLVDSLGLPKKVAESISKKVSFEDKGNPDSVLSLLRSHGFTDSQISSIITDYPQL 114
Query: 112 LLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRRFFTSDQ 171
L+ D + PK QFL S+GAS S++ V P L K +K I ++ ++ +D+
Sbjct: 115 LVADAEKSIGPKLQFLQSRGASRSELTHIVSTVPEILGKRGDKTISIYYDFVKEIIEADK 174
Query: 172 --KAIACVIACPTAISDDRVVPNLNLLIDLGVSPSNI--NNLFRTRPSILSSGDLGSAVE 227
K + P + + N+ +L +LGV P + L + + +++
Sbjct: 175 SSKFEKLCHSLPEGSKQENKIRNVLVLRELGV-PQRLLFPLLISDHQPVCGKENFEESLK 233
Query: 228 EVKGYGFDPSKTLFSVALLAKRAMAKSQWDTKVDALKKWGWSEDTVVDAFRRQPSIMLRS 287
+V GFDP+ + F AL + KV+ K G+S V F++ PS + S
Sbjct: 234 KVVEMGFDPTTSKFVKALRVVYRFRDKTIEAKVNVCKSLGFSVGDVWAMFKKCPSFLNFS 293
Query: 288 TEKLNAVMNLW 298
N ++ W
Sbjct: 294 E---NKIVQTW 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 5/199 (2%)
Query: 186 DDRVVPNLNLLIDLGVSPSNINNLFRTRPSIL--SSGDLGSAVEEVKGYGFDPSKTLFSV 243
D + +N+ LG S ++ +F+ PS L S + E +K G L +
Sbjct: 259 DKTIEAKVNVCKSLGFSVGDVWAMFKKCPSFLNFSENKIVQTWETLKKCGLLEDDVLSVL 318
Query: 244 ALLAKRAMAKSQ-WDTKVDALKKWGWSEDTVVDAFRRQPSIMLRSTEKLNAVMNLWVDQL 302
+ A Q ++ G+S D V +R P ++ S E + V ++
Sbjct: 319 KKFPQCINASEQKIMNSIETFLGLGFSRDEVAMIAKRFPQCLILSAETVKKKTEFLVKKM 378
Query: 303 GWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLSKGLMKKE-ASLTTPFGLTDELFLQKF 361
W A+++ P + GYSLEKR IPR +V+K L+SKG + E +++ T+E FL ++
Sbjct: 379 NWPLKAVVSTPAVLGYSLEKRTIPRCNVIKALMSKGSLGSELPGMSSVLVCTNEEFLCRY 438
Query: 362 V-NCFEKEETSRLLRLYQG 379
V N +K+ L+ ++ G
Sbjct: 439 VKNHDDKKIVPELMAIFTG 457
>AT1G61960.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22902239-22903612 FORWARD
LENGTH=457
Length = 457
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 123/249 (49%), Gaps = 16/249 (6%)
Query: 52 SFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPEL 111
+FTVSY + G + + A SK+V F + PDSV++ T++GFT SQ ++I P L
Sbjct: 52 NFTVSYLVDSLGLTTKLAESISKKVSFEERRNPDSVLSLLTSYGFTKSQISSIITIYPRL 111
Query: 112 LLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRRFFTSDQ 171
L D + PK Q L S+GAS S++ V P+ L K K I ++ ++ +D
Sbjct: 112 LALDAEKSIAPKLQSLQSRGASSSELTQIVSTVPKILGKRGHKSITVYYDFVKDIIEAD- 170
Query: 172 KAIACVIACPTAISDDR--VVPNLNLLIDLGVSPSNINNLFRTRPSILSSGD-------L 222
K+ + C + ++ + N+++L +LGV+ LF P ++S G
Sbjct: 171 KSSSYEKLCHSFPQGNKKNKIRNISVLRELGVAQ---RLLF---PLLISDGQPVCGKERF 224
Query: 223 GSAVEEVKGYGFDPSKTLFSVALLAKRAMAKSQWDTKVDALKKWGWSEDTVVDAFRRQPS 282
++++V GFDP T F AL M+ + KV+ K+ G+ V F++ PS
Sbjct: 225 EESLKKVVEMGFDPETTKFVEALRVIYRMSDKTIEEKVNVYKRLGFGVADVWAIFKKWPS 284
Query: 283 IMLRSTEKL 291
+ S +K+
Sbjct: 285 FLSYSEKKI 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 184 ISDDRVVPNLNLLIDLGVSPSNINNLFRTRPSILSSGD--LGSAVEEVKGYGFDPSKTLF 241
+SD + +N+ LG +++ +F+ PS LS + + E +K G + L
Sbjct: 253 MSDKTIEEKVNVYKRLGFGVADVWAIFKKWPSFLSYSEKKITHTFETLKSCGLLKHEVLL 312
Query: 242 SVALLAKRAMAKSQ-WDTKVDALKKWGWSEDTVVDAFRRQPSIMLRSTEKLNAVMNLWVD 300
+ K + Q ++ G+S D +R P + + E + V
Sbjct: 313 LLKKHPKCICSSEQKIVNSIETFLGLGFSRDEFAMMVKRYPQCIDYTAETVKKKTEFIVK 372
Query: 301 QLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLSKGLMKKEAS---LTTPFGLTDELF 357
+ W AL++ P +FGYSLEKR +PR +V+K L+SKGLMK + +++ TD+ F
Sbjct: 373 NMNWPLEALVSIPQVFGYSLEKRTVPRCNVIKTLISKGLMKDGSEAPPMSSVLTSTDQAF 432
Query: 358 LQKFVNCFEK 367
L+++V +K
Sbjct: 433 LRRYVMKHDK 442
>AT1G62110.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22958094-22959482 REVERSE
LENGTH=462
Length = 462
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 119/249 (47%), Gaps = 3/249 (1%)
Query: 51 QSFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPE 110
++FTVSY + G + + A SK+V F + PD V++ F ++GFT SQ ++I P
Sbjct: 51 KNFTVSYLVDSLGLATKLAESISKKVSFVNKGNPDLVLSLFRSYGFTNSQISSIITDYPR 110
Query: 111 LLLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRRFFTSD 170
LLL D L K QFL S+GAS ++ V P+ L K + ++ ++ +D
Sbjct: 111 LLLIDAEKSLDIKLQFLESRGASSPELTQIVSTVPKILGMKEGKSLGRYYDFVKEIIEAD 170
Query: 171 Q--KAIACVIACPTAISDDRVVPNLNLLIDLGVSPSNINNLFRTRPS-ILSSGDLGSAVE 227
+ K P A + N+++L DLGV + +L + + + +++
Sbjct: 171 KSSKYETLCQPLPEANRQGNKIRNVSVLRDLGVPQKLLFSLLISDAQPVCGKENFEESLK 230
Query: 228 EVKGYGFDPSKTLFSVALLAKRAMAKSQWDTKVDALKKWGWSEDTVVDAFRRQPSIMLRS 287
+V GFDP+ + F AL A + +V+ K +G++ + V F++ P + S
Sbjct: 231 KVVEMGFDPTTSKFVQALRAVYRFTDKTIEERVNVYKGFGFAVEDVWAMFKKCPYFLNSS 290
Query: 288 TEKLNAVMN 296
+K+ +
Sbjct: 291 EKKIGQTIE 299
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 98/204 (48%), Gaps = 14/204 (6%)
Query: 185 SDDRVVPNLNLLIDLGVSPSNINNLFRTRPSILSSGD--LGSAVEEVKGYGFDPSKTLFS 242
+D + +N+ G + ++ +F+ P L+S + +G +E +K G +
Sbjct: 255 TDKTIEERVNVYKGFGFAVEDVWAMFKKCPYFLNSSEKKIGQTIETLKKCGLLEDEV--- 311
Query: 243 VALLAKRAMAKSQWDTKV----DALKKWGWSEDTVVDAFRRQPSIMLRSTEKLNAVMNLW 298
+++L K + K+ + G+S D + +R P ++ S E + +
Sbjct: 312 ISVLKKYPQCIGTSEQKILNSIEIFLGLGFSRDEFITMVKRFPQCLILSAETVKKKIEFV 371
Query: 299 VDQLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLSKGLMKKEASLTTPFG----LTD 354
V ++ W +++ P + GY+LEKR +PR +V++ L+SK L+ S P TD
Sbjct: 372 VKKMNWPLKDVVSNPTVLGYNLEKRTVPRCNVIEALMSKRLLGDTGSELPPMSSVLVCTD 431
Query: 355 ELFLQKFV-NCFEKEETSRLLRLY 377
ELFL+++V N +KE L+ +Y
Sbjct: 432 ELFLKRYVRNHGDKELVLELMTIY 455
>AT5G23930.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:8074625-8075998 REVERSE
LENGTH=457
Length = 457
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 7/242 (2%)
Query: 50 KQSFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTP 109
+++FTVSY + G + + A S + F++ PDSV+ ++GF SQ ++I P
Sbjct: 53 RKTFTVSYLIDSLGLTTKLAESISMKANFDEKGNPDSVLKLLRSYGFKDSQISSIISTYP 112
Query: 110 ELLLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRRFFTS 169
L+ +P L K FL GAS S++ V + P+ L K K I ++ ++
Sbjct: 113 RFLIENPEKTLRAKLHFLKLNGASSSELTEIVSKVPKILGKRGGKWISHYYDYVKEILQD 172
Query: 170 DQKAIACVIACPTAISDDRVVPNLNLLIDLGVSPSNINNLFRTRPS-ILSSGDLGSAVEE 228
+ + T + +R N+++L LGV + NL +R + +V++
Sbjct: 173 QDSSSSSSKRKQT--NRNR---NVSVLRKLGVPQRLLLNLLISRAKPVCGKERFEESVKK 227
Query: 229 VKGYGFDPSKTLFSVALLAKRAMAKSQWDTKVDALKKWGWSEDTVVDAFRRQPSIMLRST 288
+ GFDP F AL ++ + KV+A + G S + V F++ P L+ +
Sbjct: 228 IVEMGFDPKSPKFVNALYVFYELSDKTIEEKVNAYIRLGLSVNEVWAVFKKWP-FSLKYS 286
Query: 289 EK 290
EK
Sbjct: 287 EK 288
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 89/187 (47%), Gaps = 11/187 (5%)
Query: 184 ISDDRVVPNLNLLIDLGVSPSNINNLFRTRPSIL--SSGDLGSAVEEVKGYGFDPSKTLF 241
+SD + +N I LG+S + + +F+ P L S ++ E +K G +
Sbjct: 250 LSDKTIEEKVNAYIRLGLSVNEVWAVFKKWPFSLKYSEKNIIQKFETLKRVGLTKEE--- 306
Query: 242 SVALLAKR-----AMAKSQWDTKVDALKKWGWSEDTVVDAFRRQPSIMLRSTEKLNAVMN 296
V L+ K+ ++ + V + G+++D V+ +R P + + + +
Sbjct: 307 -VCLVVKKYPECVGTSEEKIVKSVKTFLELGFTKDEVLMIIKRHPQCIGLAADSVKKKTE 365
Query: 297 LWVDQLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLSKGLMKKEASLTTPFGLTDEL 356
V +GW + + PI+ G+SLEK ++PR +V+K L+S GL+ + ++++
Sbjct: 366 FLVKTMGWPLKVVASTPIVLGFSLEKFVLPRCNVIKALMSNGLIGEMPAISSVLTSPKLK 425
Query: 357 FLQKFVN 363
FL+ FV
Sbjct: 426 FLKLFVE 432
>AT1G79220.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:29799227-29800426 FORWARD
LENGTH=399
Length = 399
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 121/272 (44%), Gaps = 24/272 (8%)
Query: 123 KFQFLASKGASPSDIVTTVIRSPRFL--------RKNLEKQIVPAFEAIRRFFTSDQKAI 174
K L G + SD+V + PRF R N +I+ + E +RR
Sbjct: 118 KLSLLKPLGITSSDLVKILNCRPRFFSCRLVLDERINYFMEILGSKEVLRRV-------- 169
Query: 175 ACVIACPTAIS---DDRVVPNLNLLIDLGVSPSNINNLFRTRPSILSSGDLGSA-VEEVK 230
+I P+ + DD++ P + LG S ++ + +RP+++ + + E ++
Sbjct: 170 --IIRNPSLMLYDLDDKIKPAIEYYKGLGFSQQDLVAMLISRPTLIPRTNFNNEKFEYIE 227
Query: 231 GYGFDPSKTLFSVALLAKRAMAKSQWDTKVDALKKWGWSEDTVVDAFRRQPSIMLRSTEK 290
G +F + + KV L+K+G+SE+ + + + P ++ S EK
Sbjct: 228 KTGVTRESKMFKYVAVIIGVSRMETIEEKVRNLEKFGFSEEEIWHLYGKCPILLSLSVEK 287
Query: 291 LNAVMNLWVDQLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLSKGL--MKKEASLTT 348
+ M + + +++ P + +LE R+ PRA +VK +L L + KE S+
Sbjct: 288 VQRNMTFVIASMKLPAHSVVKHPCLLLLNLESRLKPRADLVKRVLEMRLKPLIKEVSIFR 347
Query: 349 PFGLTDELFLQKFVNCFEKEETSRLLRLYQGA 380
++++ FL+ +V C ++ + L+ Y+ +
Sbjct: 348 AVRMSEKRFLKVYVMCHPQDIATELMEFYEKS 379
>AT1G74120.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:27871923-27873260 REVERSE
LENGTH=445
Length = 445
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 117/288 (40%), Gaps = 46/288 (15%)
Query: 60 TNCGFSHQAALKASKRVLFNDA------NKPDSVITFFTNHGFTLSQTHNVIGRTPELLL 113
+NCG + A K VL + + +K + + + GF S ++ P +LL
Sbjct: 117 SNCGKHGVVSSSAIKSVLEHSSRIGIGPDKFNECVRVLKSLGFCDSTVSRILSSFPGVLL 176
Query: 114 FDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRRFFTSDQKA 173
+ ++ K +FL G + R N+E RFF +
Sbjct: 177 VN-EIEIRRKIEFLVGIGIA---------------RDNIE-----------RFFHVFPEV 209
Query: 174 IACVIACPTAISDDRVVPNLNLLIDLGVSPSNINNLFRTRPSILSS--GDLGSAVEEVKG 231
+ ++ R+ P L+ + +G S ++ P +L G+L +E +
Sbjct: 210 LGIG-------TETRLKPLLDEFMKMGFSKDDVKKEIAREPRVLGLELGELPRCLELINT 262
Query: 232 YGFDPSKTLFSVALLAKRAM-AKSQWDTKVDALKKWGWSEDTVVDAFRRQPSIMLRSTEK 290
+ + V+++++ A A + +VD L K+G ++P ++L E
Sbjct: 263 L---KCREVIRVSIISEGAFRAGFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIED 319
Query: 291 LNAVMNLWVDQLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLSKG 338
+ + +++G+ + L P G +L+K+I+PR +V+ YL KG
Sbjct: 320 IEKKIEFLTNRMGFHINCLADVPEYLGVNLQKQIVPRYNVIDYLKLKG 367
>AT5G06810.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:2108493-2112256 FORWARD
LENGTH=1141
Length = 1141
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 19/198 (9%)
Query: 184 ISDDRVVPNLNLLIDLGVSPSNINNLFRTRPSILSSGDLGSAVEEVKGYGFD---PSKTL 240
I R+ LLI+L + + + P + +G V+ + G+ SKT+
Sbjct: 927 IGVSRLKQTSTLLINLKGGKGRLCQVIQENPEEMKKWIMGLRVQPLPATGYKVNTKSKTM 986
Query: 241 FSVALL----------AKRAMAK-----SQWDTKVDALKKWGWSEDTVVDAFRRQPSIML 285
+ LL +RA+ S+ + + L +G +E V D + PSI+
Sbjct: 987 KTQFLLDLGYKENSEEMERALKNFRGKGSELRERFNVLVSFGLTEKDVKDMVKACPSILT 1046
Query: 286 RSTEKLNAVMNLWVDQLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLSKGLMKKEAS 345
++ + L + +N V +LG+ S L+ P Y+L+ R+ R S+ +L +G +
Sbjct: 1047 QACDILESKVNYLVKELGYPLSTLVTFPTCLKYTLQ-RMKLRFSMFSWLQDRGKADPKLQ 1105
Query: 346 LTTPFGLTDELFLQKFVN 363
++T +D+ F +FVN
Sbjct: 1106 VSTILVCSDKFFATRFVN 1123