Miyakogusa Predicted Gene

Lj0g3v0363189.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0363189.1 Non Chatacterized Hit- tr|I3SXJ5|I3SXJ5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,61.66,0,Mitochondrial termination factor repeats,Mitochodrial
transcription termination factor-related; mTER,CUFF.25018.1
         (387 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G07900.1 | Symbols:  | Mitochondrial transcription terminatio...   202   2e-52
AT1G21150.1 | Symbols:  | Mitochondrial transcription terminatio...   168   5e-42
AT1G61970.2 | Symbols:  | Mitochondrial transcription terminatio...   152   5e-37
AT1G61970.1 | Symbols:  | Mitochondrial transcription terminatio...   152   5e-37
AT1G61980.1 | Symbols:  | Mitochondrial transcription terminatio...   149   3e-36
AT1G61990.1 | Symbols:  | Mitochondrial transcription terminatio...   143   2e-34
AT1G62120.1 | Symbols:  | Mitochondrial transcription terminatio...   141   1e-33
AT1G62150.1 | Symbols:  | Mitochondrial transcription terminatio...   118   7e-27
AT3G46950.1 | Symbols:  | Mitochondrial transcription terminatio...   115   5e-26
AT5G64950.1 | Symbols:  | Mitochondrial transcription terminatio...   111   7e-25
AT1G62010.1 | Symbols:  | Mitochondrial transcription terminatio...   110   2e-24
AT1G56380.2 | Symbols:  | Mitochondrial transcription terminatio...   103   3e-22
AT1G56380.1 | Symbols:  | Mitochondrial transcription terminatio...   103   3e-22
AT1G62085.1 | Symbols:  | Mitochondrial transcription terminatio...   101   8e-22
AT1G61960.1 | Symbols:  | Mitochondrial transcription terminatio...    99   5e-21
AT1G62110.1 | Symbols:  | Mitochondrial transcription terminatio...    94   1e-19
AT5G23930.1 | Symbols:  | Mitochondrial transcription terminatio...    81   1e-15
AT1G79220.1 | Symbols:  | Mitochondrial transcription terminatio...    68   1e-11
AT1G74120.1 | Symbols:  | Mitochondrial transcription terminatio...    55   9e-08
AT5G06810.1 | Symbols:  | Mitochondrial transcription terminatio...    50   3e-06

>AT5G07900.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr5:2520188-2521405 FORWARD
           LENGTH=405
          Length = 405

 Score =  202 bits (515), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 111/340 (32%), Positives = 189/340 (55%), Gaps = 7/340 (2%)

Query: 49  DKQSFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRT 108
            K SFT++Y   +CG S  +A  AS+++L +   +P++V+    +HGFT +Q  +++ + 
Sbjct: 66  QKLSFTLNYLIDSCGLSPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKR 125

Query: 109 PELLLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRRFFT 168
           P LLL +  + LLPK  F  S G S S +  T+   P  L ++L  Q++P++  ++    
Sbjct: 126 PVLLLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLD 185

Query: 169 SDQKAIACVIACPTAISDDR---VVPNLNLLIDLGVSPSNINNLFRTRPSIL--SSGDLG 223
           SD+K +A +        +D    +VPN+N + + GV    I  L    P  +   + +  
Sbjct: 186 SDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQ 245

Query: 224 SAVEEVKGYGFDPSKTLFSVALLAKRAMA-KSQWDTKVDALKKWGWSEDTVVDAFRRQPS 282
           +  ++ +  GF+P K+ F +A+ A      KS WD   +  ++WGWSED ++ AF++ P 
Sbjct: 246 AIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPH 305

Query: 283 IMLRSTEKLNAVMNLWVDQLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLSKGLMKK 342
            M+ S  K+N  M  +V+++     ++   P++  +SLEKRIIPR SV K L+S GL+K+
Sbjct: 306 CMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKE 365

Query: 343 EASLTTPFGLTDELFLQKFVNCFEKEETSRLLRLYQGACK 382
           + SLT+     +++FL+K V  +E EE   L+ LY G  K
Sbjct: 366 DWSLTSLLVPVEKVFLEKLVIKYE-EELPELMNLYLGCTK 404


>AT1G21150.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:7406406-7407578 REVERSE
           LENGTH=390
          Length = 390

 Score =  168 bits (426), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 165/324 (50%), Gaps = 6/324 (1%)

Query: 51  QSFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPE 110
           +SFTVSY   +CG S ++A   S+ V    + KPDSV+  F +HGFT  Q  +VI   P 
Sbjct: 55  ESFTVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPR 114

Query: 111 LLLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRRFFTSD 170
           +L   P   + PK  F +S G S SD    +  SP+ L  +L K+++P +++++     +
Sbjct: 115 VLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEE 174

Query: 171 QKAIACV---IACPTAISDDRVVPNLNLLIDLGVSPSNINNLFRTRPSILSSGD--LGSA 225
           +  + C+   I C +      V   +++  +LGV   +I  L +  P    S +      
Sbjct: 175 ESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEV 234

Query: 226 VEEVKGYGFDPSKTLFSVALLAKRAMAKSQWDTKVDALKKWGWSEDTVVDAFRRQPSIML 285
           +  V  YGFDP K  F  A++A    ++S  + K    + +GWS++  V A  R P+ + 
Sbjct: 235 LNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVT 294

Query: 286 RSTEKLNAVMNLWVDQLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLSKGLMKKE-A 344
            S EK+   +   V+ +G     ++A P++   S+EKRI PR  V+  LLSKGL+KKE  
Sbjct: 295 VSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDI 354

Query: 345 SLTTPFGLTDELFLQKFVNCFEKE 368
           +  T   L    F+ KFV  ++ E
Sbjct: 355 NYFTILKLKSSEFMDKFVLKYQDE 378


>AT1G61970.2 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22904713-22905969 FORWARD
           LENGTH=418
          Length = 418

 Score =  152 bits (383), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 176/369 (47%), Gaps = 42/369 (11%)

Query: 52  SFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPEL 111
           +FTVSY   + G + + A   S++V F D N PDSV+   T+HGFT SQ   +I   P+L
Sbjct: 52  NFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQL 111

Query: 112 LLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIR-RFFTSD 170
           L+ D    L PK QFL S+GAS S+I   V   P  L K   K I   ++ I+       
Sbjct: 112 LIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKS 171

Query: 171 QKAIACVIACPTAISDDRVVPNLNLLIDLGVSPSNINNLF--RTRPSILSSGDLGSAVEE 228
            K      + P    ++++  N+++L +LG+    + +L    ++P +         +++
Sbjct: 172 SKNEKLCHSLPQGNLENKI-RNVSVLRELGMPHKLLFSLLISDSQP-VCGKEKFEETLKK 229

Query: 229 VKGYGFDPSKTLFSVALLAKRAMAKSQWDTKVD--------------ALKKW-------- 266
           V   GFDP+ + F  AL     M +   + KV               + KKW        
Sbjct: 230 VVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSE 289

Query: 267 -------------GWSEDTVVDAFRRQPSIMLRSTEKLNAVMNLWVDQLGWDTSALLAAP 313
                        G+S D      +  P  +  STE +       V ++ W   A+++ P
Sbjct: 290 KKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNP 349

Query: 314 IIFGYSLEKRIIPRASVVKYLLSKGLMKKE-ASLTTPFGLTDELFLQKFV-NCFEKEETS 371
            +FGYSLEKRI+PR +V+K L+SKGLM+ E  S++     T ++FL ++V N  +K+  +
Sbjct: 350 AVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVT 409

Query: 372 RLLRLYQGA 380
            L+ +Y+ +
Sbjct: 410 ELMAIYRAS 418


>AT1G61970.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22904713-22905969 FORWARD
           LENGTH=418
          Length = 418

 Score =  152 bits (383), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 176/369 (47%), Gaps = 42/369 (11%)

Query: 52  SFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPEL 111
           +FTVSY   + G + + A   S++V F D N PDSV+   T+HGFT SQ   +I   P+L
Sbjct: 52  NFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQL 111

Query: 112 LLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIR-RFFTSD 170
           L+ D    L PK QFL S+GAS S+I   V   P  L K   K I   ++ I+       
Sbjct: 112 LIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKS 171

Query: 171 QKAIACVIACPTAISDDRVVPNLNLLIDLGVSPSNINNLF--RTRPSILSSGDLGSAVEE 228
            K      + P    ++++  N+++L +LG+    + +L    ++P +         +++
Sbjct: 172 SKNEKLCHSLPQGNLENKI-RNVSVLRELGMPHKLLFSLLISDSQP-VCGKEKFEETLKK 229

Query: 229 VKGYGFDPSKTLFSVALLAKRAMAKSQWDTKVD--------------ALKKW-------- 266
           V   GFDP+ + F  AL     M +   + KV               + KKW        
Sbjct: 230 VVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSE 289

Query: 267 -------------GWSEDTVVDAFRRQPSIMLRSTEKLNAVMNLWVDQLGWDTSALLAAP 313
                        G+S D      +  P  +  STE +       V ++ W   A+++ P
Sbjct: 290 KKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNP 349

Query: 314 IIFGYSLEKRIIPRASVVKYLLSKGLMKKE-ASLTTPFGLTDELFLQKFV-NCFEKEETS 371
            +FGYSLEKRI+PR +V+K L+SKGLM+ E  S++     T ++FL ++V N  +K+  +
Sbjct: 350 AVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVT 409

Query: 372 RLLRLYQGA 380
            L+ +Y+ +
Sbjct: 410 ELMAIYRAS 418


>AT1G61980.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22908162-22909418 FORWARD
           LENGTH=418
          Length = 418

 Score =  149 bits (376), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 179/370 (48%), Gaps = 42/370 (11%)

Query: 51  QSFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPE 110
           +SFTVSY   + G   + A   S++V F D + PDSV+    +HGFT SQ   ++   P+
Sbjct: 51  KSFTVSYLVDSLGLPKKLAESVSRKVSFEDKDNPDSVLNLLRSHGFTDSQISTIVTDYPQ 110

Query: 111 LLLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRR-FFTS 169
           LL+ D    L PK QFL S+GAS S++   V   P+ L K   K I   ++ I+      
Sbjct: 111 LLVADAEKSLAPKLQFLQSRGASSSELTEIVSTVPKILGKRGHKTISVFYDFIKETLLDK 170

Query: 170 DQKAIACVIACPTAISDDRVVPNLNLLIDLGVSPSNI--NNLFRTRPSILSSGDLGSAVE 227
             K+       P    +++ + NL++L +LG+ P  +    L      +        +++
Sbjct: 171 SSKSEKSCQPFPQGNLENK-IRNLSVLRELGM-PHKLLFPLLISCDVPVFGKEKFEESLK 228

Query: 228 EVKGYGFDPSKTLFSVALLAKRAMAKSQWDTKVDALKKWGWSEDTVVDAFRRQPSIMLRS 287
           +V   GFDPS + F  AL   + ++    + KV+A K+ G+  + V   F+R P+ +  S
Sbjct: 229 KVVEMGFDPSTSKFVEALCVVQRLSDKNIEDKVNAYKRLGFDVEYVWTVFKRWPNFLTHS 288

Query: 288 TEK------------------------------LNAVM-----NLWVDQLGWDTSALLAA 312
            +K                              L+A M        V ++ W   AL++ 
Sbjct: 289 EKKILNTIETFLGLGFSRDEFSVLIKRFPQGIGLSAEMVKKKTEFLVKKMNWPLKALVSN 348

Query: 313 PIIFGYSLEKRIIPRASVVKYLLSKGLMKKE-ASLTTPFGLTDELFLQKFVNCFE-KEET 370
           P + GYSLEKR +PR +VV+ L+SKGL+  E  S++  F  TD++FL ++V   E K+  
Sbjct: 349 PAVLGYSLEKRTVPRGNVVQALISKGLIGSELPSISRVFVCTDQVFLNRYVKRHEDKQLE 408

Query: 371 SRLLRLYQGA 380
           + L+ +Y+ +
Sbjct: 409 TELMAIYRAS 418


>AT1G61990.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22911453-22912697 FORWARD
           LENGTH=414
          Length = 414

 Score =  143 bits (360), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 173/351 (49%), Gaps = 46/351 (13%)

Query: 51  QSFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPE 110
           ++FTVSY   + G S + A   S++V F D   PDSV++ F ++GFT SQ   +I   P 
Sbjct: 51  KNFTVSYLVDSLGLSKKLAESISRKVSFEDKVNPDSVLSLFRSYGFTDSQISTIITDYPL 110

Query: 111 LLLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRRFFTSD 170
           LL+ D    L  K Q L S+GAS S+I   V   PR L K   K I   ++A++    +D
Sbjct: 111 LLVADAKKALGRKLQILQSRGASSSEITEIVSTVPRILGK---KSITVYYDAVKDIIVAD 167

Query: 171 QKAIACVIACPTAISDDRVVPNLNLLIDLGVSPSNINNLFRTRPS-ILSSGDLGSAVEEV 229
               +     P     ++ + N++ L +LG+    +  L  ++   +    +  +++++V
Sbjct: 168 T---SSSYELPQGSQGNK-IRNVSALRELGMPSRLLLPLLVSKSQPVCGKENFDASLKKV 223

Query: 230 KGYGFDPSKTLFSVALLAKRAMAKSQWDTKVDALKKWGWSEDTVVDAFRRQPSIMLRSTE 289
              GFDP+ T F +AL     M++   + KV   +  G++ D V + F++ PS++  S +
Sbjct: 224 VEMGFDPTTTKFVLALRMLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKKTPSVLKVSKK 283

Query: 290 KLNAVMNLWVD-----------------------------------QLGWDTSALLAAPI 314
           K+      ++D                                   ++ W  +AL+  P 
Sbjct: 284 KILKSAETFLDLGYSRAEFLMMVKRYPPCIEYSVESVKKKNEFLVKKMKWPRNALVLHPQ 343

Query: 315 IFGYSLEKRIIPRASVVKYLLSKGLMKKEASL---TTPFGLTDELFLQKFV 362
           +FGYS+EKRIIPR ++++ LLSKGL++K + L   ++    TDE FL ++V
Sbjct: 344 VFGYSMEKRIIPRCNILEALLSKGLLRKGSELPAVSSVLSCTDEGFLDRYV 394


>AT1G62120.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22960326-22961639 REVERSE
           LENGTH=437
          Length = 437

 Score =  141 bits (355), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 179/379 (47%), Gaps = 50/379 (13%)

Query: 51  QSFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPE 110
            +FTVSY   + G + + A   S +V F++   PDSV++   +HGFT SQ  N+I   P 
Sbjct: 55  HNFTVSYLVDSLGLATKVAESISMKVSFDNKGNPDSVLSLLRSHGFTDSQISNIIRTFPR 114

Query: 111 LLLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRRFFTSD 170
           LL+ D    L PK QFL S GAS S++  TV   P+ L K   K +   ++ ++    +D
Sbjct: 115 LLILDAEKSLAPKLQFLQSIGASSSELTETVSAVPKILGKRKGKSLSRYYDFVKVIIEAD 174

Query: 171 Q--KAIACVIACPTAISDDRVVPNLNLLIDLGVSPSNINNLFRTRPSILSSGDL------ 222
           +  K      + P     +  + NL +L ++GV    + +L      I  +GD+      
Sbjct: 175 KSSKLEKLCHSLPEGSKQENKIRNLLVLREMGVPQRLLFSLL-----ISDAGDVCGKEKF 229

Query: 223 GSAVEEVKGYGFDPSKTLFSVALLAKRAMAKSQWDTKVDALKKWGWSEDTVVDAFRRQPS 282
             ++++    GFDP+   F  AL     ++    + K +A K+ G + D V   F++ P+
Sbjct: 230 KESLKKAVEIGFDPTTATFVKALNVLYGLSDKGIENKFNACKRLGLAVDDVWAMFKKWPN 289

Query: 283 IMLRSTEKL-NAV----------------------------------MNLWVDQLGWDTS 307
           I+ +S +K+ N+V                                      V ++ W   
Sbjct: 290 ILTKSEKKIENSVETFLGLGFSRDEFLMMVKRFPQCIGYSTELMKTKTEFLVTEMNWPLK 349

Query: 308 ALLAAPIIFGYSLEKRIIPRASVVKYLLSKGLMKKE-ASLTTPFGLTDELFLQKFVNCF- 365
           A+ + P + GYSLEKR +PR +V+K L+SKGL++ E   +++    T E+FL  +V    
Sbjct: 350 AVASIPQVLGYSLEKRTVPRCNVIKVLISKGLLESELPPISSVLTSTSEVFLYMYVRKHD 409

Query: 366 EKEETSRLLRLYQGACKSL 384
           +K+  + L+ ++ G   SL
Sbjct: 410 DKQLVAELMAIFTGDRVSL 428


>AT1G62150.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22970198-22971589 REVERSE
           LENGTH=463
          Length = 463

 Score =  118 bits (295), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/387 (24%), Positives = 163/387 (42%), Gaps = 78/387 (20%)

Query: 52  SFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPEL 111
           +FTVSY   + G + + A   S +V F +   PD+V+    +H FT SQ  ++I   P L
Sbjct: 58  NFTVSYLVDSLGLASKLAESISMKVSFENKGNPDTVLNLLRSHEFTDSQISSIISDYPTL 117

Query: 112 LLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRRFFTSDQ 171
           L+ D    L PK   + S+GAS S++   V + P+ L    +K I   ++ ++    +D+
Sbjct: 118 LVADAENSLGPKLLLMQSRGASSSELTEIVSKVPKILGMKGDKSIGRYYDIVKEIIEADK 177

Query: 172 --KAIACVIACPTAISDDRVVPNLNLLIDLGVSPSNI--NNLFRTRPSILSSGDLGSAVE 227
             K      + P     +  + N+ +L DLGV P  +  + LF              ++ 
Sbjct: 178 SSKFEKLCHSLPEGSKQENKIRNVLVLRDLGV-PQRLLFSLLFSNHHVCCGKEKFEESLN 236

Query: 228 EVKGYGFDPSKTLFSVALLAKRAMAKSQ------------------WD------------ 257
           +V G GFDP+   F  AL     ++  +                  W+            
Sbjct: 237 KVVGMGFDPTTPKFVEALCIVYGLSDKRLEENFNVYKRFGLTVNDVWELFKKCPAFLGYS 296

Query: 258 -----TKVDALKKWGWSEDTVVDAFRRQPSIMLRSTEK--LNAV---------------- 294
                   +ALK+ G  ED V+  F++ P + LR++E+  LN++                
Sbjct: 297 ENRIIQTFEALKRCGLCEDEVLSVFKKNP-LCLRASEQQILNSMETFIGLGFSRDEFVMM 355

Query: 295 ------------------MNLWVDQLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLS 336
                                 V ++ W    +   P + GYS+EKR +PR +V+K L+S
Sbjct: 356 VKCLPQCIGYSAEMVKKKTEFVVKKMNWPLKVITLFPQVLGYSMEKRTVPRCNVIKALMS 415

Query: 337 KGLMKKE-ASLTTPFGLTDELFLQKFV 362
           KGL+  E   + +    TD+ FL+++V
Sbjct: 416 KGLLGSELPPMASVLACTDQTFLKRYV 442


>AT3G46950.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr3:17289452-17290804 FORWARD
           LENGTH=450
          Length = 450

 Score =  115 bits (288), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 128/255 (50%), Gaps = 11/255 (4%)

Query: 44  FSTTCDKQS------FTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFT 97
           FS+T  K S      FTVSY   + G + + A   SK+V F D   PDSV+    ++GF 
Sbjct: 38  FSSTIAKDSSPKGSTFTVSYLVESLGLTKKLAETISKKVTFEDKVNPDSVLNLLRSNGFK 97

Query: 98  LSQTHNVIGRTPELLLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIV 157
            SQ   +I   P LL+ D    L PK QFL S+GAS S+++  V   P  L K  E+ + 
Sbjct: 98  DSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSNVPTILDKKGEESVS 157

Query: 158 PAFEAIRRFFTSDQKAIACVIACPTAISDDRVVPNLNLLIDLGVSPSNINNLFRTR-PSI 216
             ++ ++      Q   +  I+CP     +R + N+++L +LGV    + +L  +R   +
Sbjct: 158 LYYDFVKDIM---QDGKSLCISCPEGKKGNR-IRNISVLRELGVPQKLLFSLLISRYQPV 213

Query: 217 LSSGDLGSAVEEVKGYGFDPSKTLFSVALLAKRAMAKSQWDTKVDALKKWGWSEDTVVDA 276
                   ++++V   GFDP+K+ F  AL     M++   + KV+  K+ G+SE  +   
Sbjct: 214 CGKEKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEKVNVYKRLGFSEAEIWAI 273

Query: 277 FRRQPSIMLRSTEKL 291
           F++ P  +  S +K+
Sbjct: 274 FKKWPYFLKFSEKKI 288



 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 10/186 (5%)

Query: 184 ISDDRVVPNLNLLIDLGVSPSNINNLFRTRPSIL--SSGDLGSAVEEVKGYGFDPSKTLF 241
           +S+  +   +N+   LG S + I  +F+  P  L  S   +    E +K  G    +   
Sbjct: 248 MSEKTIEEKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKIILMFETLKKCGLVEEEI-- 305

Query: 242 SVALLAKRAMAKSQWDTKV-DALKKW---GWSEDTVVDAFRRQPSIMLRSTEKLNAVMNL 297
            +++L  R       + K+ D+++ +   G+S D      +R P     S E L     +
Sbjct: 306 -ISVLKSRPQCIRSSEQKILDSIEMFLGLGFSRDDFKMMVKRYPCCTAYSGETLRKKFEV 364

Query: 298 WVDQLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLSKGLMKKE-ASLTTPFGLTDEL 356
            V  + W   A++  P + GYSLEKRI+PR++V+K L+SKGL+  E   +++    TD+ 
Sbjct: 365 LVKMMNWPLEAVVMIPTVLGYSLEKRIVPRSNVIKALMSKGLIGSENPPISSVLVCTDQE 424

Query: 357 FLQKFV 362
           FL+++V
Sbjct: 425 FLKRYV 430


>AT5G64950.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr5:25953887-25955062 FORWARD
           LENGTH=391
          Length = 391

 Score =  111 bits (278), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 159/339 (46%), Gaps = 13/339 (3%)

Query: 55  VSYFKTNCGFSHQAALKASKRVL-FNDANKPDSVITFFTNHGFTLSQTHNVIGRTPELLL 113
           V + + N GF    A+  + R        +P SVI    ++ F+ +Q    I   P ++ 
Sbjct: 42  VEFLRDN-GFQKPLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMF 100

Query: 114 FDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRRFFTSDQKA 173
           ++    L PK +F    G + S +   V ++   +  +L K+++P  E ++       + 
Sbjct: 101 YNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHED 160

Query: 174 IACVIA-CP-TAISDDR---VVPNLNLLIDLGVSPSNINNLFRTRPSI--LSSGDLGSAV 226
           +  +++ C    +S D    ++PN++ L   G+  S + +L R +P I  LS   L   V
Sbjct: 161 LPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYV 220

Query: 227 EEVKGYGFDPSKTLFSVALLAKRAMAKSQWDTKVDALKKWGWSEDTVVDAFRRQPSIMLR 286
                 GF  +  +   A+++  ++++  +D KV      G+SED + D  RR P ++  
Sbjct: 221 SRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRC 280

Query: 287 STEKLNAVMNLWVDQLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYL----LSKGLMKK 342
           S +KL      ++ ++G +  AL   P +  Y+LEKR+IPR  V++ L    L     KK
Sbjct: 281 SEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKK 340

Query: 343 EASLTTPFGLTDELFLQKFVNCFEKEETSRLLRLYQGAC 381
           + ++     +T+E FL+K+V  F  E    LL  Y+  C
Sbjct: 341 KKNMVGIVEMTEEAFLEKYVVRFGDEIAEELLVAYKCVC 379


>AT1G62010.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22915886-22917133 FORWARD
           LENGTH=415
          Length = 415

 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 158/346 (45%), Gaps = 42/346 (12%)

Query: 78  FNDANKPDSVITFFTNHGFTLSQTHNVIGRTPELLLFDPTTKLLPKFQFLASKGASPSDI 137
             D    DSV+    ++GFT SQ  ++I     +L+ +  T L  K QFL S+GAS S++
Sbjct: 64  LTDKGNSDSVLDLLRSYGFTDSQISSIIRSDSRVLIDNDATSLGSKLQFLQSRGASSSEL 123

Query: 138 VTTVIRSPRFLRKNLEKQIVPAFEAIRRFFTSDQKAIACVIACPTAISDDRVVPNLNLLI 197
              V   P+ L K   K +   ++ I+    +D+ +    I+   A  +   + N+ +L 
Sbjct: 124 TEVVSTVPKILGKREGKSLSRYYDFIKVIIEADKSSKYEKISHSLAQGNK--IRNILVLR 181

Query: 198 DLGVSPSNINNLF--RTRPSILSSGDLGSAVEEVKGYGFDPSKTLFSVALLAKRAMAKSQ 255
           +LGV    +  L   +++P +       +++++V   GFDP+ + F  AL     M+   
Sbjct: 182 ELGVPQKRLLLLLISKSQP-VCGKEKFDASLKKVVEMGFDPTTSTFVHALHMLYQMSDKT 240

Query: 256 WDTKVDA--------------LKKW---------------------GWSEDTVVDAFRRQ 280
            + K+                 KKW                     G+S D  +  F+R 
Sbjct: 241 IEEKIRVYRSVGFSVDDVWAMFKKWPRSLTHSEKKVANSIETFLGLGFSRDVFMMMFKRF 300

Query: 281 PSIMLRSTEKLNAVMNLWVDQLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLSKGLM 340
           P  +  STE +       V ++ W   A+ + P + GYSLEKR +PR +V+K L+SKGL+
Sbjct: 301 PPCIGYSTEAVKKKTEFLVKEMNWPVKAVASIPQVLGYSLEKRTVPRCNVIKVLMSKGLL 360

Query: 341 KKE-ASLTTPFGLTDELFLQKFVNCF-EKEETSRLLRLYQGACKSL 384
           + E   +++    T E FL  +V+   +K+  + L+ ++ G   SL
Sbjct: 361 ESELPPMSSVLTSTSESFLNLYVSKHDDKQLVAELMAIFTGNRVSL 406


>AT1G56380.2 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:21101327-21102701 FORWARD
           LENGTH=399
          Length = 399

 Score =  103 bits (256), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 165/362 (45%), Gaps = 48/362 (13%)

Query: 53  FTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPELL 112
            TVSY   + G   + A    K V   D   P+SV+    ++ FT SQ  ++I   PELL
Sbjct: 28  LTVSYLVDSVGIPIKFAESILKEVSSKDKCNPNSVLNLLRSYDFTDSQISSIITTDPELL 87

Query: 113 LFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRR------- 165
           + D    L PK +FL S+    S +   V R P+ LR   EK ++  ++ ++        
Sbjct: 88  MEDAENSLCPKLKFLESREILSSRLNDIVTRVPKILRMEEEKSMITYYDFVKTITLTSSR 147

Query: 166 --FF----------TSDQKAI-------------ACVIACPTAISDDRVVPNLNLLIDLG 200
             F+          +S +K I             A V+ C   +S++ +   +N+   LG
Sbjct: 148 SDFYKVCELYPYIESSIRKVIEMGFDPFAPKIFDATVVVC--TLSNETLEERVNIYKTLG 205

Query: 201 VSPSNINNLFRTRPSIL--SSGDLGSAVEEVKGYGFDPSKTLFSVALLAKRAMAKSQWDT 258
               ++  +F+  P+ L  S   +  + E +K  G    + + S+   + + +  S+ D 
Sbjct: 206 FDVRDVWEMFKKCPTFLNISEKKITQSFETLKKCGL-VEEEVISMFQKSPQCIDFSELDI 264

Query: 259 --KVDALKKWGWSEDTVVDAFRRQPSIMLRSTEK-LNAVMNLWVDQLGWDT-------SA 308
               + LK  G  E+ V+  F+R P  +  S +K LNAV          D          
Sbjct: 265 TQNFEFLKGCGLVEEEVLSMFKRYPQCIGFSEKKILNAVETFLGQGFSKDEVMMMVNREG 324

Query: 309 LLAAPIIFGYSLEKRIIPRASVVKYLLSKGLMKKE-ASLTTPFGLTDELFLQKFVNCFEK 367
           +++ P++  +S+EK I+PR +V+K L SK L+K E +S+ +     DE+FL+++V+  + 
Sbjct: 325 VVSIPVVLEFSMEKMIVPRCNVIKALTSKRLLKTEVSSMFSVLICPDEVFLERYVSKHDD 384

Query: 368 EE 369
           +E
Sbjct: 385 QE 386


>AT1G56380.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:21101374-21102701 FORWARD
           LENGTH=388
          Length = 388

 Score =  103 bits (256), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 165/362 (45%), Gaps = 48/362 (13%)

Query: 53  FTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPELL 112
            TVSY   + G   + A    K V   D   P+SV+    ++ FT SQ  ++I   PELL
Sbjct: 17  LTVSYLVDSVGIPIKFAESILKEVSSKDKCNPNSVLNLLRSYDFTDSQISSIITTDPELL 76

Query: 113 LFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRR------- 165
           + D    L PK +FL S+    S +   V R P+ LR   EK ++  ++ ++        
Sbjct: 77  MEDAENSLCPKLKFLESREILSSRLNDIVTRVPKILRMEEEKSMITYYDFVKTITLTSSR 136

Query: 166 --FF----------TSDQKAI-------------ACVIACPTAISDDRVVPNLNLLIDLG 200
             F+          +S +K I             A V+ C   +S++ +   +N+   LG
Sbjct: 137 SDFYKVCELYPYIESSIRKVIEMGFDPFAPKIFDATVVVC--TLSNETLEERVNIYKTLG 194

Query: 201 VSPSNINNLFRTRPSIL--SSGDLGSAVEEVKGYGFDPSKTLFSVALLAKRAMAKSQWDT 258
               ++  +F+  P+ L  S   +  + E +K  G    + + S+   + + +  S+ D 
Sbjct: 195 FDVRDVWEMFKKCPTFLNISEKKITQSFETLKKCGL-VEEEVISMFQKSPQCIDFSELDI 253

Query: 259 --KVDALKKWGWSEDTVVDAFRRQPSIMLRSTEK-LNAVMNLWVDQLGWDT-------SA 308
               + LK  G  E+ V+  F+R P  +  S +K LNAV          D          
Sbjct: 254 TQNFEFLKGCGLVEEEVLSMFKRYPQCIGFSEKKILNAVETFLGQGFSKDEVMMMVNREG 313

Query: 309 LLAAPIIFGYSLEKRIIPRASVVKYLLSKGLMKKE-ASLTTPFGLTDELFLQKFVNCFEK 367
           +++ P++  +S+EK I+PR +V+K L SK L+K E +S+ +     DE+FL+++V+  + 
Sbjct: 314 VVSIPVVLEFSMEKMIVPRCNVIKALTSKRLLKTEVSSMFSVLICPDEVFLERYVSKHDD 373

Query: 368 EE 369
           +E
Sbjct: 374 QE 375


>AT1G62085.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22948757-22950142 REVERSE
           LENGTH=461
          Length = 461

 Score =  101 bits (252), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 8/251 (3%)

Query: 52  SFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPEL 111
           SF+VSY   + G   + A   SK+V F D   PDSV++   +HGFT SQ  ++I   P+L
Sbjct: 55  SFSVSYLVDSLGLPKKVAESISKKVSFEDKGNPDSVLSLLRSHGFTDSQISSIITDYPQL 114

Query: 112 LLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRRFFTSDQ 171
           L+ D    + PK QFL S+GAS S++   V   P  L K  +K I   ++ ++    +D+
Sbjct: 115 LVADAEKSIGPKLQFLQSRGASRSELTHIVSTVPEILGKRGDKTISIYYDFVKEIIEADK 174

Query: 172 --KAIACVIACPTAISDDRVVPNLNLLIDLGVSPSNI--NNLFRTRPSILSSGDLGSAVE 227
             K      + P     +  + N+ +L +LGV P  +    L      +    +   +++
Sbjct: 175 SSKFEKLCHSLPEGSKQENKIRNVLVLRELGV-PQRLLFPLLISDHQPVCGKENFEESLK 233

Query: 228 EVKGYGFDPSKTLFSVALLAKRAMAKSQWDTKVDALKKWGWSEDTVVDAFRRQPSIMLRS 287
           +V   GFDP+ + F  AL           + KV+  K  G+S   V   F++ PS +  S
Sbjct: 234 KVVEMGFDPTTSKFVKALRVVYRFRDKTIEAKVNVCKSLGFSVGDVWAMFKKCPSFLNFS 293

Query: 288 TEKLNAVMNLW 298
               N ++  W
Sbjct: 294 E---NKIVQTW 301



 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 5/199 (2%)

Query: 186 DDRVVPNLNLLIDLGVSPSNINNLFRTRPSIL--SSGDLGSAVEEVKGYGFDPSKTLFSV 243
           D  +   +N+   LG S  ++  +F+  PS L  S   +    E +K  G      L  +
Sbjct: 259 DKTIEAKVNVCKSLGFSVGDVWAMFKKCPSFLNFSENKIVQTWETLKKCGLLEDDVLSVL 318

Query: 244 ALLAKRAMAKSQ-WDTKVDALKKWGWSEDTVVDAFRRQPSIMLRSTEKLNAVMNLWVDQL 302
               +   A  Q     ++     G+S D V    +R P  ++ S E +       V ++
Sbjct: 319 KKFPQCINASEQKIMNSIETFLGLGFSRDEVAMIAKRFPQCLILSAETVKKKTEFLVKKM 378

Query: 303 GWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLSKGLMKKE-ASLTTPFGLTDELFLQKF 361
            W   A+++ P + GYSLEKR IPR +V+K L+SKG +  E   +++    T+E FL ++
Sbjct: 379 NWPLKAVVSTPAVLGYSLEKRTIPRCNVIKALMSKGSLGSELPGMSSVLVCTNEEFLCRY 438

Query: 362 V-NCFEKEETSRLLRLYQG 379
           V N  +K+    L+ ++ G
Sbjct: 439 VKNHDDKKIVPELMAIFTG 457


>AT1G61960.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22902239-22903612 FORWARD
           LENGTH=457
          Length = 457

 Score = 99.0 bits (245), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 123/249 (49%), Gaps = 16/249 (6%)

Query: 52  SFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPEL 111
           +FTVSY   + G + + A   SK+V F +   PDSV++  T++GFT SQ  ++I   P L
Sbjct: 52  NFTVSYLVDSLGLTTKLAESISKKVSFEERRNPDSVLSLLTSYGFTKSQISSIITIYPRL 111

Query: 112 LLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRRFFTSDQ 171
           L  D    + PK Q L S+GAS S++   V   P+ L K   K I   ++ ++    +D 
Sbjct: 112 LALDAEKSIAPKLQSLQSRGASSSELTQIVSTVPKILGKRGHKSITVYYDFVKDIIEAD- 170

Query: 172 KAIACVIACPTAISDDR--VVPNLNLLIDLGVSPSNINNLFRTRPSILSSGD-------L 222
           K+ +    C +    ++   + N+++L +LGV+      LF   P ++S G         
Sbjct: 171 KSSSYEKLCHSFPQGNKKNKIRNISVLRELGVAQ---RLLF---PLLISDGQPVCGKERF 224

Query: 223 GSAVEEVKGYGFDPSKTLFSVALLAKRAMAKSQWDTKVDALKKWGWSEDTVVDAFRRQPS 282
             ++++V   GFDP  T F  AL     M+    + KV+  K+ G+    V   F++ PS
Sbjct: 225 EESLKKVVEMGFDPETTKFVEALRVIYRMSDKTIEEKVNVYKRLGFGVADVWAIFKKWPS 284

Query: 283 IMLRSTEKL 291
            +  S +K+
Sbjct: 285 FLSYSEKKI 293



 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 6/190 (3%)

Query: 184 ISDDRVVPNLNLLIDLGVSPSNINNLFRTRPSILSSGD--LGSAVEEVKGYGFDPSKTLF 241
           +SD  +   +N+   LG   +++  +F+  PS LS  +  +    E +K  G    + L 
Sbjct: 253 MSDKTIEEKVNVYKRLGFGVADVWAIFKKWPSFLSYSEKKITHTFETLKSCGLLKHEVLL 312

Query: 242 SVALLAKRAMAKSQ-WDTKVDALKKWGWSEDTVVDAFRRQPSIMLRSTEKLNAVMNLWVD 300
            +    K   +  Q     ++     G+S D      +R P  +  + E +       V 
Sbjct: 313 LLKKHPKCICSSEQKIVNSIETFLGLGFSRDEFAMMVKRYPQCIDYTAETVKKKTEFIVK 372

Query: 301 QLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLSKGLMKKEAS---LTTPFGLTDELF 357
            + W   AL++ P +FGYSLEKR +PR +V+K L+SKGLMK  +    +++    TD+ F
Sbjct: 373 NMNWPLEALVSIPQVFGYSLEKRTVPRCNVIKTLISKGLMKDGSEAPPMSSVLTSTDQAF 432

Query: 358 LQKFVNCFEK 367
           L+++V   +K
Sbjct: 433 LRRYVMKHDK 442


>AT1G62110.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22958094-22959482 REVERSE
           LENGTH=462
          Length = 462

 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 119/249 (47%), Gaps = 3/249 (1%)

Query: 51  QSFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTPE 110
           ++FTVSY   + G + + A   SK+V F +   PD V++ F ++GFT SQ  ++I   P 
Sbjct: 51  KNFTVSYLVDSLGLATKLAESISKKVSFVNKGNPDLVLSLFRSYGFTNSQISSIITDYPR 110

Query: 111 LLLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRRFFTSD 170
           LLL D    L  K QFL S+GAS  ++   V   P+ L     K +   ++ ++    +D
Sbjct: 111 LLLIDAEKSLDIKLQFLESRGASSPELTQIVSTVPKILGMKEGKSLGRYYDFVKEIIEAD 170

Query: 171 Q--KAIACVIACPTAISDDRVVPNLNLLIDLGVSPSNINNLFRTRPS-ILSSGDLGSAVE 227
           +  K        P A      + N+++L DLGV    + +L  +    +    +   +++
Sbjct: 171 KSSKYETLCQPLPEANRQGNKIRNVSVLRDLGVPQKLLFSLLISDAQPVCGKENFEESLK 230

Query: 228 EVKGYGFDPSKTLFSVALLAKRAMAKSQWDTKVDALKKWGWSEDTVVDAFRRQPSIMLRS 287
           +V   GFDP+ + F  AL A         + +V+  K +G++ + V   F++ P  +  S
Sbjct: 231 KVVEMGFDPTTSKFVQALRAVYRFTDKTIEERVNVYKGFGFAVEDVWAMFKKCPYFLNSS 290

Query: 288 TEKLNAVMN 296
            +K+   + 
Sbjct: 291 EKKIGQTIE 299



 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 98/204 (48%), Gaps = 14/204 (6%)

Query: 185 SDDRVVPNLNLLIDLGVSPSNINNLFRTRPSILSSGD--LGSAVEEVKGYGFDPSKTLFS 242
           +D  +   +N+    G +  ++  +F+  P  L+S +  +G  +E +K  G    +    
Sbjct: 255 TDKTIEERVNVYKGFGFAVEDVWAMFKKCPYFLNSSEKKIGQTIETLKKCGLLEDEV--- 311

Query: 243 VALLAKRAMAKSQWDTKV----DALKKWGWSEDTVVDAFRRQPSIMLRSTEKLNAVMNLW 298
           +++L K        + K+    +     G+S D  +   +R P  ++ S E +   +   
Sbjct: 312 ISVLKKYPQCIGTSEQKILNSIEIFLGLGFSRDEFITMVKRFPQCLILSAETVKKKIEFV 371

Query: 299 VDQLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLSKGLMKKEASLTTPFG----LTD 354
           V ++ W    +++ P + GY+LEKR +PR +V++ L+SK L+    S   P       TD
Sbjct: 372 VKKMNWPLKDVVSNPTVLGYNLEKRTVPRCNVIEALMSKRLLGDTGSELPPMSSVLVCTD 431

Query: 355 ELFLQKFV-NCFEKEETSRLLRLY 377
           ELFL+++V N  +KE    L+ +Y
Sbjct: 432 ELFLKRYVRNHGDKELVLELMTIY 455


>AT5G23930.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr5:8074625-8075998 REVERSE
           LENGTH=457
          Length = 457

 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 7/242 (2%)

Query: 50  KQSFTVSYFKTNCGFSHQAALKASKRVLFNDANKPDSVITFFTNHGFTLSQTHNVIGRTP 109
           +++FTVSY   + G + + A   S +  F++   PDSV+    ++GF  SQ  ++I   P
Sbjct: 53  RKTFTVSYLIDSLGLTTKLAESISMKANFDEKGNPDSVLKLLRSYGFKDSQISSIISTYP 112

Query: 110 ELLLFDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRRFFTS 169
             L+ +P   L  K  FL   GAS S++   V + P+ L K   K I   ++ ++     
Sbjct: 113 RFLIENPEKTLRAKLHFLKLNGASSSELTEIVSKVPKILGKRGGKWISHYYDYVKEILQD 172

Query: 170 DQKAIACVIACPTAISDDRVVPNLNLLIDLGVSPSNINNLFRTRPS-ILSSGDLGSAVEE 228
              + +      T  + +R   N+++L  LGV    + NL  +R   +        +V++
Sbjct: 173 QDSSSSSSKRKQT--NRNR---NVSVLRKLGVPQRLLLNLLISRAKPVCGKERFEESVKK 227

Query: 229 VKGYGFDPSKTLFSVALLAKRAMAKSQWDTKVDALKKWGWSEDTVVDAFRRQPSIMLRST 288
           +   GFDP    F  AL     ++    + KV+A  + G S + V   F++ P   L+ +
Sbjct: 228 IVEMGFDPKSPKFVNALYVFYELSDKTIEEKVNAYIRLGLSVNEVWAVFKKWP-FSLKYS 286

Query: 289 EK 290
           EK
Sbjct: 287 EK 288



 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 89/187 (47%), Gaps = 11/187 (5%)

Query: 184 ISDDRVVPNLNLLIDLGVSPSNINNLFRTRPSIL--SSGDLGSAVEEVKGYGFDPSKTLF 241
           +SD  +   +N  I LG+S + +  +F+  P  L  S  ++    E +K  G    +   
Sbjct: 250 LSDKTIEEKVNAYIRLGLSVNEVWAVFKKWPFSLKYSEKNIIQKFETLKRVGLTKEE--- 306

Query: 242 SVALLAKR-----AMAKSQWDTKVDALKKWGWSEDTVVDAFRRQPSIMLRSTEKLNAVMN 296
            V L+ K+       ++ +    V    + G+++D V+   +R P  +  + + +     
Sbjct: 307 -VCLVVKKYPECVGTSEEKIVKSVKTFLELGFTKDEVLMIIKRHPQCIGLAADSVKKKTE 365

Query: 297 LWVDQLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLSKGLMKKEASLTTPFGLTDEL 356
             V  +GW    + + PI+ G+SLEK ++PR +V+K L+S GL+ +  ++++        
Sbjct: 366 FLVKTMGWPLKVVASTPIVLGFSLEKFVLPRCNVIKALMSNGLIGEMPAISSVLTSPKLK 425

Query: 357 FLQKFVN 363
           FL+ FV 
Sbjct: 426 FLKLFVE 432


>AT1G79220.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:29799227-29800426 FORWARD
           LENGTH=399
          Length = 399

 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 121/272 (44%), Gaps = 24/272 (8%)

Query: 123 KFQFLASKGASPSDIVTTVIRSPRFL--------RKNLEKQIVPAFEAIRRFFTSDQKAI 174
           K   L   G + SD+V  +   PRF         R N   +I+ + E +RR         
Sbjct: 118 KLSLLKPLGITSSDLVKILNCRPRFFSCRLVLDERINYFMEILGSKEVLRRV-------- 169

Query: 175 ACVIACPTAIS---DDRVVPNLNLLIDLGVSPSNINNLFRTRPSILSSGDLGSA-VEEVK 230
             +I  P+ +    DD++ P +     LG S  ++  +  +RP+++   +  +   E ++
Sbjct: 170 --IIRNPSLMLYDLDDKIKPAIEYYKGLGFSQQDLVAMLISRPTLIPRTNFNNEKFEYIE 227

Query: 231 GYGFDPSKTLFSVALLAKRAMAKSQWDTKVDALKKWGWSEDTVVDAFRRQPSIMLRSTEK 290
             G      +F    +          + KV  L+K+G+SE+ +   + + P ++  S EK
Sbjct: 228 KTGVTRESKMFKYVAVIIGVSRMETIEEKVRNLEKFGFSEEEIWHLYGKCPILLSLSVEK 287

Query: 291 LNAVMNLWVDQLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLSKGL--MKKEASLTT 348
           +   M   +  +     +++  P +   +LE R+ PRA +VK +L   L  + KE S+  
Sbjct: 288 VQRNMTFVIASMKLPAHSVVKHPCLLLLNLESRLKPRADLVKRVLEMRLKPLIKEVSIFR 347

Query: 349 PFGLTDELFLQKFVNCFEKEETSRLLRLYQGA 380
              ++++ FL+ +V C  ++  + L+  Y+ +
Sbjct: 348 AVRMSEKRFLKVYVMCHPQDIATELMEFYEKS 379


>AT1G74120.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:27871923-27873260 REVERSE
           LENGTH=445
          Length = 445

 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 59/288 (20%), Positives = 117/288 (40%), Gaps = 46/288 (15%)

Query: 60  TNCGFSHQAALKASKRVLFNDA------NKPDSVITFFTNHGFTLSQTHNVIGRTPELLL 113
           +NCG     +  A K VL + +      +K +  +    + GF  S    ++   P +LL
Sbjct: 117 SNCGKHGVVSSSAIKSVLEHSSRIGIGPDKFNECVRVLKSLGFCDSTVSRILSSFPGVLL 176

Query: 114 FDPTTKLLPKFQFLASKGASPSDIVTTVIRSPRFLRKNLEKQIVPAFEAIRRFFTSDQKA 173
            +   ++  K +FL   G +               R N+E           RFF    + 
Sbjct: 177 VN-EIEIRRKIEFLVGIGIA---------------RDNIE-----------RFFHVFPEV 209

Query: 174 IACVIACPTAISDDRVVPNLNLLIDLGVSPSNINNLFRTRPSILSS--GDLGSAVEEVKG 231
           +          ++ R+ P L+  + +G S  ++       P +L    G+L   +E +  
Sbjct: 210 LGIG-------TETRLKPLLDEFMKMGFSKDDVKKEIAREPRVLGLELGELPRCLELINT 262

Query: 232 YGFDPSKTLFSVALLAKRAM-AKSQWDTKVDALKKWGWSEDTVVDAFRRQPSIMLRSTEK 290
                 + +  V+++++ A  A  +   +VD L K+G           ++P ++L   E 
Sbjct: 263 L---KCREVIRVSIISEGAFRAGFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIED 319

Query: 291 LNAVMNLWVDQLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLSKG 338
           +   +    +++G+  + L   P   G +L+K+I+PR +V+ YL  KG
Sbjct: 320 IEKKIEFLTNRMGFHINCLADVPEYLGVNLQKQIVPRYNVIDYLKLKG 367


>AT5G06810.1 | Symbols:  | Mitochondrial transcription termination
            factor family protein | chr5:2108493-2112256 FORWARD
            LENGTH=1141
          Length = 1141

 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 19/198 (9%)

Query: 184  ISDDRVVPNLNLLIDLGVSPSNINNLFRTRPSILSSGDLGSAVEEVKGYGFD---PSKTL 240
            I   R+     LLI+L      +  + +  P  +    +G  V+ +   G+     SKT+
Sbjct: 927  IGVSRLKQTSTLLINLKGGKGRLCQVIQENPEEMKKWIMGLRVQPLPATGYKVNTKSKTM 986

Query: 241  FSVALL----------AKRAMAK-----SQWDTKVDALKKWGWSEDTVVDAFRRQPSIML 285
             +  LL           +RA+       S+   + + L  +G +E  V D  +  PSI+ 
Sbjct: 987  KTQFLLDLGYKENSEEMERALKNFRGKGSELRERFNVLVSFGLTEKDVKDMVKACPSILT 1046

Query: 286  RSTEKLNAVMNLWVDQLGWDTSALLAAPIIFGYSLEKRIIPRASVVKYLLSKGLMKKEAS 345
            ++ + L + +N  V +LG+  S L+  P    Y+L+ R+  R S+  +L  +G    +  
Sbjct: 1047 QACDILESKVNYLVKELGYPLSTLVTFPTCLKYTLQ-RMKLRFSMFSWLQDRGKADPKLQ 1105

Query: 346  LTTPFGLTDELFLQKFVN 363
            ++T    +D+ F  +FVN
Sbjct: 1106 VSTILVCSDKFFATRFVN 1123