Miyakogusa Predicted Gene

Lj0g3v0362709.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0362709.1 Non Chatacterized Hit- tr|I3S5I7|I3S5I7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,TRP_SYNTHASE_BETA,Tryptophan synthase, beta chain,
conserved site; Tryptophan synthase beta
subunit-,NODE_60639_length_1598_cov_14.050689.path1.1
         (417 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G27070.1 | Symbols: TSB2 | tryptophan synthase beta-subunit 2...   748   0.0  
AT5G54810.1 | Symbols: TSB1, TRPB, TRP2, ATTSB1 | tryptophan syn...   746   0.0  
AT5G28237.1 | Symbols:  | Pyridoxal-5'-phosphate-dependent enzym...   555   e-158
AT5G38530.1 | Symbols: TSBtype2 | tryptophan synthase beta type ...   121   9e-28

>AT4G27070.1 | Symbols: TSB2 | tryptophan synthase beta-subunit 2 |
           chr4:13586564-13588619 FORWARD LENGTH=475
          Length = 475

 Score =  748 bits (1930), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/413 (85%), Positives = 387/413 (93%), Gaps = 3/413 (0%)

Query: 8   DSEETNGS---SVLSHRPDSFGRYGRFGGKYVPETLMHAITELEAAFHSLAHDEAFQKEL 64
           DSE+   +     +  RPDSFGR+G+FGGKYVPETLMHA++ELE AF+SLA DE FQ+EL
Sbjct: 63  DSEKIKAAGSDPTMWQRPDSFGRFGKFGGKYVPETLMHALSELETAFYSLATDEDFQREL 122

Query: 65  GGILRDYVGRESPLYFAERLTEHYRRGDGEGPHVYLKREDLNHTGAHKINNAVAQALLAK 124
             IL+DYVGRESPLYFAERLTEHYRR +GEGP +YLKREDLNHTGAHKINNAVAQALLAK
Sbjct: 123 AEILKDYVGRESPLYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQALLAK 182

Query: 125 RLGKKRVIAETGAGQHGVATATVCARFGLECVVYMGAQDMERQSLNVFRMRLLGAEVRAV 184
           RLGKKR+IAETGAGQHGVATATVCARFGL+C++YMGAQDMERQ+LNVFRMRLLGAEVR V
Sbjct: 183 RLGKKRIIAETGAGQHGVATATVCARFGLQCIIYMGAQDMERQALNVFRMRLLGAEVRGV 242

Query: 185 HSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFQAVIGKETRKQALEK 244
           HSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVR+F AVIGKETRKQA+EK
Sbjct: 243 HSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQAMEK 302

Query: 245 WGGKPDILVACVGGGSNAMGLFHEFIDDKDVRLIGVEAAGLGLESGKHAATLTKGEIGVL 304
           WGGKPD+LVACVGGGSNAMGLFHEF+DD +VR+IGVEAAG GL+SGKHAATLTKG++GVL
Sbjct: 303 WGGKPDVLVACVGGGSNAMGLFHEFVDDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVL 362

Query: 305 HGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDVGRAEYYSVTDEEALEAFKRL 364
           HGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDVGRAEY+SVTDEEALEAFKR+
Sbjct: 363 HGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDVGRAEYFSVTDEEALEAFKRV 422

Query: 365 SQLEGIIPALETSHALAYLEKLCPTLPNGTKVVVNCSGRGDKDVQTASKYFNV 417
           S+LEGIIPALETSHALA+LEKLCPTLP+G +VV+N SGRGDKDVQTA KY  V
Sbjct: 423 SRLEGIIPALETSHALAHLEKLCPTLPDGARVVLNFSGRGDKDVQTAIKYLEV 475


>AT5G54810.1 | Symbols: TSB1, TRPB, TRP2, ATTSB1 | tryptophan
           synthase beta-subunit 1 | chr5:22264805-22266738 REVERSE
           LENGTH=470
          Length = 470

 Score =  746 bits (1925), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/400 (87%), Positives = 384/400 (96%)

Query: 18  LSHRPDSFGRYGRFGGKYVPETLMHAITELEAAFHSLAHDEAFQKELGGILRDYVGRESP 77
           L  RPDSFGR+G+FGGKYVPETLMHA++ELE+AF++LA D+ FQ+EL GIL+DYVGRESP
Sbjct: 71  LWQRPDSFGRFGKFGGKYVPETLMHALSELESAFYALATDDDFQRELAGILKDYVGRESP 130

Query: 78  LYFAERLTEHYRRGDGEGPHVYLKREDLNHTGAHKINNAVAQALLAKRLGKKRVIAETGA 137
           LYFAERLTEHYRR +GEGP +YLKREDLNHTGAHKINNAVAQALLAKRLGKKR+IAETGA
Sbjct: 131 LYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGA 190

Query: 138 GQHGVATATVCARFGLECVVYMGAQDMERQSLNVFRMRLLGAEVRAVHSGTATLKDATSE 197
           GQHGVATATVCARFGLEC++YMGAQDMERQ+LNVFRMRLLGAEVR VHSGTATLKDATSE
Sbjct: 191 GQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRGVHSGTATLKDATSE 250

Query: 198 AIRDWVTNVETTHYILGSVAGPHPYPMMVREFQAVIGKETRKQALEKWGGKPDILVACVG 257
           AIRDWVTNVETTHYILGSVAGPHPYPMMVR+F AVIGKETRKQALEKWGGKPD+LVACVG
Sbjct: 251 AIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACVG 310

Query: 258 GGSNAMGLFHEFIDDKDVRLIGVEAAGLGLESGKHAATLTKGEIGVLHGAMSYLLQDDDG 317
           GGSNAMGLFHEF++D +VR+IGVEAAG GL+SGKHAATLTKG++GVLHGAMSYLLQDDDG
Sbjct: 311 GGSNAMGLFHEFVNDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDG 370

Query: 318 QIIEPHSISAGLDYPGVGPEHSFLKDVGRAEYYSVTDEEALEAFKRLSQLEGIIPALETS 377
           QIIEPHSISAGLDYPGVGPEHSF KD+GRAEYYS+TDEEALEAFKR+S+LEGIIPALETS
Sbjct: 371 QIIEPHSISAGLDYPGVGPEHSFFKDMGRAEYYSITDEEALEAFKRVSRLEGIIPALETS 430

Query: 378 HALAYLEKLCPTLPNGTKVVVNCSGRGDKDVQTASKYFNV 417
           HALAYLEKLCPTL +GT+VV+N SGRGDKDVQT +KY +V
Sbjct: 431 HALAYLEKLCPTLSDGTRVVLNFSGRGDKDVQTVAKYLDV 470


>AT5G28237.1 | Symbols:  | Pyridoxal-5'-phosphate-dependent enzyme
           family protein | chr5:10207477-10213542 REVERSE
           LENGTH=465
          Length = 465

 Score =  555 bits (1430), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 262/393 (66%), Positives = 323/393 (82%), Gaps = 6/393 (1%)

Query: 21  RPDSFGRYGRFGGKYVPETLMHAITELEAAFHSLAHDEAFQKELGGILRDYVGRESPLYF 80
           R D  G++GRFGGK+VPETLM  + ELE  F+ +  D  FQ+EL   LRDYVGRE+PLYF
Sbjct: 65  RGDGNGKFGRFGGKFVPETLMSRLIELEDEFNFVRCDHEFQEELTTALRDYVGRETPLYF 124

Query: 81  AERLTEHYRRGDGE---GPHVYLKREDLNHTGAHKINNAVAQALLAKRLGKKRVIAETGA 137
           AERLTEHY+        GP +YLKREDL+H G+HKINNA+AQA++++RLG  RV+A TGA
Sbjct: 125 AERLTEHYKNIVPTIEGGPEIYLKREDLSHCGSHKINNALAQAMISRRLGCSRVVAATGA 184

Query: 138 GQHGVATATVCARFGLECVVYMGAQDMERQSLNVFRMRLLGAEVRAVHSGTATLKDATSE 197
           GQHGVATA  CA+  LEC V+MGA D+E+QS NV  M+LLGA+V +V     T KDA+SE
Sbjct: 185 GQHGVATAAACAKLSLECTVFMGAADIEKQSFNVLSMKLLGAQVISVE---GTFKDASSE 241

Query: 198 AIRDWVTNVETTHYILGSVAGPHPYPMMVREFQAVIGKETRKQALEKWGGKPDILVACVG 257
           AIR+WV N+ TT+Y+ G+V GPHP P++VREFQ+VIGKETR+QA + WGGKPD+LVACVG
Sbjct: 242 AIRNWVENLYTTYYLSGTVVGPHPCPIIVREFQSVIGKETRRQAKQLWGGKPDVLVACVG 301

Query: 258 GGSNAMGLFHEFIDDKDVRLIGVEAAGLGLESGKHAATLTKGEIGVLHGAMSYLLQDDDG 317
            GSNA+GLFHEF+ D+DVRL+GVEAAGLGL+SGKH+ATL  G++GV HG+MSYLLQDD G
Sbjct: 302 SGSNALGLFHEFVGDEDVRLVGVEAAGLGLDSGKHSATLAFGDVGVYHGSMSYLLQDDQG 361

Query: 318 QIIEPHSISAGLDYPGVGPEHSFLKDVGRAEYYSVTDEEALEAFKRLSQLEGIIPALETS 377
           QI++PHS+  GL+YPGVGPE SF+K+ GRAE+Y+ TDEEA++A  RLS+LEGIIPALE S
Sbjct: 362 QILKPHSVGVGLEYPGVGPEISFMKETGRAEFYTATDEEAIQACMRLSRLEGIIPALEAS 421

Query: 378 HALAYLEKLCPTLPNGTKVVVNCSGRGDKDVQT 410
           HALA+L+KL PTL +G KVVVNCSGRGDKD+ T
Sbjct: 422 HALAFLDKLVPTLRDGAKVVVNCSGRGDKDLDT 454


>AT5G38530.1 | Symbols: TSBtype2 | tryptophan synthase beta type 2 |
           chr5:15424097-15426294 FORWARD LENGTH=506
          Length = 506

 Score =  121 bits (303), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 172/408 (42%), Gaps = 49/408 (12%)

Query: 37  PETLMHAITELEAAFHSLAHDEAFQKELGGILRDYV-----GRESPLYFAERLTEHYRRG 91
           PE L H         + L   EA Q+    I  + +      R +PL  A+RL +  +  
Sbjct: 96  PEDLAHLFP------NELIKQEATQERFIDIPEEVLEIYKLWRPTPLIRAKRLEKLLQTP 149

Query: 92  DGEGPHVYLKREDLNHTGAHKINNAVAQALLAKRLGKKRVIAETGAGQHGVATATVCARF 151
                 +Y K E  +  G+HK N AV QA    + G K V+ ETGAGQ G + A   + F
Sbjct: 150 A----RIYFKYEGGSPAGSHKPNTAVPQAYYNAKEGVKNVVTETGAGQWGSSLAFASSLF 205

Query: 152 GLECVVYMGAQDMERQSLNVFRMRLLGAEVRAV---------------HSGTATLKDATS 196
           GL+C V+  A     +      M+  GA+V                   S   +L  A S
Sbjct: 206 GLDCEVWQVANSYHTKPYRRLMMQTWGAKVHPSPSDLTEAGRRILESDPSSPGSLGIAIS 265

Query: 197 EAIRDWVTNVETTHYILGSVAGPHPYPMMVREFQAVIGKETRKQALEKWGGKPDILVACV 256
           EA+     N E T Y LGSV         V   Q +IG+E  +Q +E +G  PD+++ C 
Sbjct: 266 EAVEVAARN-EDTKYCLGSVLN------HVLLHQTIIGEECIQQ-MENFGETPDLIIGCT 317

Query: 257 GGGSNAMGLFHEFIDDKDVRLIGVEAAGLGLESGKHAATLTKG----EIGVLHGAMSYLL 312
           GGGSN  GL   FI +K   L G     +         +LTKG    + G   G    + 
Sbjct: 318 GGGSNFAGLSFPFIREK---LKGKINPVIRAVEPSACPSLTKGVYAYDFGDTAGLTPLMK 374

Query: 313 QDDDGQIIEPHSISA-GLDYPGVGPEHSFLKDVGRAEYYSVTDEEALEAFKRLSQLEGII 371
               G    P  I A GL Y G+ P  S + + G  E  S+   E  +   + ++ EGII
Sbjct: 375 MHTLGHDFIPDPIHAGGLRYHGMAPLISHVYEQGFMEAISIPQIECFQGAIQFARTEGII 434

Query: 372 PALETSHALAYL--EKL-CPTLPNGTKVVVNCSGRGDKDVQTASKYFN 416
           PA E +HA+A    E L C        +++   G G  D+ +  KY  
Sbjct: 435 PAPEPTHAIAATIREALRCKETGEAKVILMAMCGHGHFDLTSYDKYLK 482