Miyakogusa Predicted Gene

Lj0g3v0362529.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0362529.1 Non Chatacterized Hit- tr|I1LKX6|I1LKX6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24082 PE,88.57,0,no
description,WD40/YVTN repeat-like-containing domain; no
description,Tetratricopeptide-like helica,CUFF.24974.1
         (796 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G08190.1 | Symbols: ATVPS41, ZIP2, VPS41, ATVAM2, VAM2 | vacu...  1263   0.0  

>AT1G08190.1 | Symbols: ATVPS41, ZIP2, VPS41, ATVAM2, VAM2 |
           vacuolar protein sorting 41 | chr1:2567652-2573142
           FORWARD LENGTH=980
          Length = 980

 Score = 1263 bits (3269), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/768 (78%), Positives = 686/768 (89%), Gaps = 13/768 (1%)

Query: 40  PRLKYQRMGGSVPSLLASDGASCIAVAERMIALGTHDGVVHILDFLGNQVKEFAAHVAVV 99
           PRLKYQRMGG+VP+LL++D ASCIAVA RMIALGTHDG V ILD LGNQVKEF AH A V
Sbjct: 42  PRLKYQRMGGNVPALLSNDAASCIAVAARMIALGTHDGTVRILDLLGNQVKEFRAHTAPV 101

Query: 100 NDLSFDKDGEYIGSCSDDGSVVISSLFSD-EKMKFEYHRPMKAIALDPDYARNTARRFVA 158
           ND++FD +GEYIGSCSDDGSVVI+SLF+D EKMKF+YHRPMKAI+LDPDY +  ++RFVA
Sbjct: 102 NDINFDTEGEYIGSCSDDGSVVINSLFTDDEKMKFDYHRPMKAISLDPDYTKKQSKRFVA 161

Query: 159 GGLAGNLYLNSKRWLGYRDQVLHSGEGPIHAVKWRTSLVAWANDAGVKVYDTANDQRVTF 218
           GGLAG+LY+NSK+W G +DQVLHSGEGPIH+VKWR SL+AWAND GVKVYDTA DQRVTF
Sbjct: 162 GGLAGHLYMNSKKWFGNKDQVLHSGEGPIHSVKWRGSLIAWANDVGVKVYDTAKDQRVTF 221

Query: 219 IERPRSSPRPEILVPHLVWQDDTLLVIGWGTSVKIASIRTNRHQAVNGTYRQVPLSGMTQ 278
           IE+PR SPRPE L+PHLVWQDDTLLVIGWGTSVKIASI++++ Q   GT+RQ+ +S +TQ
Sbjct: 222 IEKPRGSPRPEALLPHLVWQDDTLLVIGWGTSVKIASIKSDQQQ--TGTFRQIQMSSLTQ 279

Query: 279 VDIVASFQTSYFISGIAPFGDALVVLAYIPGEEDGETDFSSSAP-SRQGNAQRPEVRIAT 337
           VDIVASFQTSY+ISGIAPFGD+LV+LAYIP E DGE +FSS+   SRQGNAQRPE+RI +
Sbjct: 280 VDIVASFQTSYYISGIAPFGDSLVILAYIPIEGDGEKEFSSTTTLSRQGNAQRPEIRIVS 339

Query: 338 RNNDELSTDALPLHGFEHYKAKDYSLAHSPFSGSSYAGGQWAAGDEPVYYIVSPKDVVIA 397
            NNDEL+ DALP+HGFEHYKAKDYSLAH+PF GSSYAGGQWAAGDEP+YYIVSPKDVVIA
Sbjct: 340 WNNDELTMDALPVHGFEHYKAKDYSLAHAPFPGSSYAGGQWAAGDEPLYYIVSPKDVVIA 399

Query: 398 KPRDVEDHIAWLLQHGWHEKALAVVESGQGRSELVDEVGSRYLDHLIVERKYAEAASLCP 457
           KPRD EDHI WLLQHG+HEKALA VE+ +GR+EL+D+VG+ YLDHLIVERKYAEAASLCP
Sbjct: 400 KPRDAEDHINWLLQHGFHEKALAAVEASEGRTELIDKVGAGYLDHLIVERKYAEAASLCP 459

Query: 458 KLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENPRLRDTAYEVALVALATNPSFHKDLL 517
           KLLRGSASAWERWVFHFA LRQLPVLVPYMPT+NPRL+DT YEVALVALATNPS+HK+LL
Sbjct: 460 KLLRGSASAWERWVFHFAQLRQLPVLVPYMPTDNPRLKDTVYEVALVALATNPSYHKELL 519

Query: 518 STVKSWPPVIYSVMPVISAIEPQLNTSSMTDPLKEALAELYVIHGQHEKAFSLYADLMKP 577
           S VKSWP  +YS + VISAIEPQLNTSSMTD LKEALAELYVI GQ++KAFSLYADL+KP
Sbjct: 520 SAVKSWPRSVYSALTVISAIEPQLNTSSMTDALKEALAELYVIDGQYQKAFSLYADLLKP 579

Query: 578 EVFDFIDKYNLHDAIREKVVQVMMLDCKRAVPLLIQNKDLISPPEVVKQL---------L 628
           EVFDFI+KY+LH+AIR KVVQ+M+LDCKRA  L IQN+DLI P EVV QL         L
Sbjct: 580 EVFDFIEKYSLHEAIRGKVVQLMLLDCKRATVLFIQNRDLIPPSEVVPQLLKAGKNPQVL 639

Query: 629 DADIKCDCRYFLHLYLHSLFEVNPHAGKDFHDLQVELYADYDPKMLLPFLRGSQHYTLEK 688
            A  KCD RY+L+LYLH+LFEV+   GKDFHD+QVELYA+YD KMLLPFLR SQHY LEK
Sbjct: 640 KAGKKCDSRYYLYLYLHALFEVSHDTGKDFHDMQVELYAEYDTKMLLPFLRSSQHYKLEK 699

Query: 689 AYEICVRRDLMREQVFILGRMGNSKQALAVIINKLGDIEEAVEFVTMQHDDELWEELIKQ 748
           AYE+CV++D +REQVF+LGRMGN+KQALAVIINKLGDIEEAVEFV+MQHDD+LWEELIKQ
Sbjct: 700 AYELCVKKDFLREQVFVLGRMGNAKQALAVIINKLGDIEEAVEFVSMQHDDDLWEELIKQ 759

Query: 749 CLHKPEMVGILLEHTVGNLDPLYIVNRFPNGMEIPRLRDRLGKIFIDY 796
           CL+KPEMVG+LLEHTVGNLDPLYIVN  PNG+EIPRLRDRL KI  DY
Sbjct: 760 CLNKPEMVGLLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIVTDY 807