Miyakogusa Predicted Gene
- Lj0g3v0362279.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0362279.1 Non Chatacterized Hit- tr|F6HFL4|F6HFL4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,21.74,2e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; PPR:
pentatricopeptide repeat domain,Pentatricopept,CUFF.24959.1
(576 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 125 6e-29
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 4e-28
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 5e-28
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 7e-28
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 5e-26
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 116 5e-26
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 7e-26
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 7e-26
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 9e-26
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 4e-25
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 8e-25
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 111 1e-24
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 110 2e-24
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 7e-24
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 107 2e-23
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 4e-23
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 5e-23
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 104 1e-22
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 103 3e-22
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 4e-22
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 5e-22
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 7e-22
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 101 1e-21
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 100 2e-21
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 7e-21
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 8e-21
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 1e-20
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 2e-20
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 4e-20
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 5e-20
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 7e-20
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 8e-20
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 1e-19
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 94 2e-19
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 94 4e-19
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 89 1e-17
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 80 4e-15
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 78 1e-14
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 78 2e-14
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 5e-14
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 76 5e-14
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 74 4e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 5e-13
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 69 9e-12
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 69 1e-11
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 66 7e-11
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 66 8e-11
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 64 3e-10
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 64 3e-10
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 61 2e-09
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 60 3e-09
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 60 4e-09
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 6e-09
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 58 2e-08
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 56 6e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 52 1e-06
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 51 2e-06
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 3e-06
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 50 6e-06
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 8e-06
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 9e-06
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 180/406 (44%), Gaps = 41/406 (10%)
Query: 170 AMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALR 229
++++ + + GR+ +AL+ +EM G PD FN ++ LCK + IE+
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 230 IFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSE 289
+ + PD Y+ + I G C+LG + A+E+ QM P N LI LC ++
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 290 KKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQP---------AVEVFWAVFNSGLLPSTF 340
+ + E RV ++ ++P++ + IQ A+E+F + + G P F
Sbjct: 381 VEEATELARVLTSKG----ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436
Query: 341 VVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRM 400
L+ LC G+ +EA+ +L+ +E Y ++ C + EA +F M
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Query: 401 LACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNW 460
G+ YN++I LC ++ A + + M + PD TY +L+ + +
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI 556
Query: 461 KVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLD 520
K A D++ M G P++ TY + + LCK G+++
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTL------------------------ISGLCKAGRVE 592
Query: 521 AAYEKAKSMLEKGIHLSAYARD-TFEHVFQK---NGKLKIARQLLE 562
A + +S+ KGI+L+ +A + + +F+K + + R++LE
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 118/508 (23%), Positives = 206/508 (40%), Gaps = 66/508 (12%)
Query: 114 AKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSI 173
+ L F+ A + F + ++ E + LGR FDDMK +L + S + ++ I
Sbjct: 64 SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLI 123
Query: 174 CIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVL---------------------- 211
I + E LS+ + M FG KPD +N +L
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVW 183
Query: 212 ---------YVLCKKQSSEETIELALRIFHKMES----PDTYSCGNTIVGFCRLGRLGAA 258
VL K + A+ + M S PD + + G+ G L A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 259 LEIFSQMNKIGVLPTRSAVNMLIGELC-------------SLSEKKGSVEKVRVRNTRRP 305
L I QM + G + +VN+++ C +S + G NT
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNT--- 300
Query: 306 CTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIV 365
+ N +G ++ A+E+ + G P + ++S LC+LG+ +EAV++L +
Sbjct: 301 ----LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 366 EERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNL 425
R + Y ++ LC QVEEA+ L + + G+ P + +NS+I LC N
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 426 DHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLV 485
AM +FE M K C PD TY LI + A ++L +M G + TYN +
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 486 DNLLREHDRSDLCLKLERKLENHQLQK-----------LCKLGQLDAAYEKAKSMLEKGI 534
+ + +++ ++ ++E H + + LCK +++ A + M+ +G
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 535 HLSAYARDTFEHVFQKNGKLKIARQLLE 562
Y ++ F + G +K A +++
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQ 564
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 165/427 (38%), Gaps = 55/427 (12%)
Query: 112 GRAK-TLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKA 170
GR + LNF Q GF D + + L + +M V Q+G P
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKH-AIEIMDVMLQEG-YDPDV 330
Query: 171 MSI--CIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELAL 228
+ I L + G + EA+ + ++M T C P+ + +N ++ LCK+ EE ELA
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITR-DCSPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 229 RIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLS 288
+ K PD + + I G C A+E+F +M G P NMLI LCS
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449
Query: 289 ------------EKKGSVEKVRVRNT-----------RRPCTIL----VPNMGGNSGA-- 319
E G V NT R I V + NS
Sbjct: 450 KLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYN 509
Query: 320 -----------IQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEER 368
++ A ++ + G P + L++ CR G ++A +++ +
Sbjct: 510 TLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN 569
Query: 369 KLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHA 428
Y ++ LC +VE AS L + G+ YN VI L A
Sbjct: 570 GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEA 629
Query: 429 MGVF-ELMNKKRCLPDNLTY----TALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQT-Y 482
+ +F E++ + PD ++Y L + G ++ A D L+E+L G++PE + Y
Sbjct: 630 INLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIRE---AVDFLVELLEKGFVPEFSSLY 686
Query: 483 NLVDNLL 489
L + LL
Sbjct: 687 MLAEGLL 693
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 206/465 (44%), Gaps = 54/465 (11%)
Query: 116 TLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICI 175
L FF WA Q ++ D V M + L + KL + +L+ + + +P+A S +
Sbjct: 190 ALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVM 249
Query: 176 RFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKME 235
R G++ +AL + M+ G +P+ L+ N + V + +E ALR +M+
Sbjct: 250 VSYSRAGQLRDALKVLTLMQRA-GVEPNLLICNTTIDVFVRANR----LEKALRFLERMQ 304
Query: 236 ----SPD--TYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSE 289
P+ TY+C I G+C L R+ A+E+ M+ G LP + + ++G LC E
Sbjct: 305 VVGIVPNVVTYNC--MIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLC--KE 360
Query: 290 KKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSEL 349
K+ V VR+ L+ M GL+P L+ L
Sbjct: 361 KR----IVEVRD-------LMKKMAK----------------EHGLVPDQVTYNTLIHML 393
Query: 350 CRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACG-LKPK 408
+ +EA+ L+ +E+ + GY+ ++ ALC ++ EA +L ML+ G P
Sbjct: 394 TKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPD 453
Query: 409 LGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLM 468
+ Y +V++ C LG +D A + ++M+ P+ ++YTAL++ + A +++
Sbjct: 454 VVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMN 513
Query: 469 EMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLE-----------NHQLQKLCKLG 517
W P TY+++ + LR + + R++ N LQ LC+ G
Sbjct: 514 MSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDG 573
Query: 518 QLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLE 562
+ A + + L KG ++ T H F +N +L A +L+
Sbjct: 574 RTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLD 618
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 176/443 (39%), Gaps = 72/443 (16%)
Query: 133 DSVVEY-MADFLGRRKLFDDMKCLLMTVASQKGKVSPKAM-SICIRFLGRHGRIHEALSL 190
D V Y + +L + K +++ L+ +A + G V + + I L +H EAL
Sbjct: 346 DKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWF 405
Query: 191 FEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKME-SPDTYSCGNTIVGF 249
++ + G + D L ++ +++ LCK+ E +L + K PD + + GF
Sbjct: 406 LKDAQEK-GFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGF 464
Query: 250 CRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTR--RPCT 307
CRLG + A ++ M+ G P + L+ +C + + E + + P +
Sbjct: 465 CRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNS 524
Query: 308 ILVPN-MGG--NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRI 364
I M G G + A +V + G P + L+ LCR G+T EA K +
Sbjct: 525 ITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFM-- 582
Query: 365 VEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGN 424
EE C+ +G AI N+ + +VI C
Sbjct: 583 -EE----CLNKGCAI---------------NVVN-------------FTTVIHGFCQNDE 609
Query: 425 LDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNL 484
LD A+ V + M D TYT L+ GK A +L+ +ML G P TY
Sbjct: 610 LDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRT 669
Query: 485 VDNLLREHDR-SDLCLKLE--------RKLENHQLQKLCKLGQLDAA------------- 522
V + + + DL LE R + N ++KLC LG+L+ A
Sbjct: 670 VIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASR 729
Query: 523 ------YEKAKSMLEKGIHLSAY 539
Y + L+KG+ LSAY
Sbjct: 730 SDAKTCYALMEGYLKKGVPLSAY 752
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 156/393 (39%), Gaps = 16/393 (4%)
Query: 96 LSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCL 155
++ N ++ +L + H A +F + GF+ D + L + + K L
Sbjct: 384 VTYNTLIHMLTKHDHADEAL---WFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDL 440
Query: 156 LMTVASQKGKVSPKAMSICIRFLG--RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYV 213
+ + S KG P ++ G R G + +A L + M T G KP+ + + +L
Sbjct: 441 INEMLS-KGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHT-HGHKPNTVSYTALLNG 498
Query: 214 LCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPT 273
+C+ S E E+ SP++ + + G R G+L A ++ +M G P
Sbjct: 499 MCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPG 558
Query: 274 RSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGG------NSGAIQPAVEVF 327
+N+L+ LC + K + C I V N + + A+ V
Sbjct: 559 PVEINLLLQSLCR-DGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVL 617
Query: 328 WAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDH 387
++ F L+ L + G+ EA +L++ + + + Y V+ C
Sbjct: 618 DDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQM 677
Query: 388 CQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTY 447
+V++ + +M++ + +YN VI LC LG L+ A + + + D T
Sbjct: 678 GKVDDLVAILEKMIS--RQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTC 735
Query: 448 TALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQ 480
AL+ + K AY + M IP+++
Sbjct: 736 YALMEGYLKKGVPLSAYKVACRMFNRNLIPDVK 768
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 169/394 (42%), Gaps = 43/394 (10%)
Query: 183 RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSC 242
RI EA+ LF +M+ C P + ++ LC + E + L + P+ ++
Sbjct: 303 RIDEAMDLFVKMKDD-ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTY 361
Query: 243 GNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNT 302
I C + A E+ QM + G++P N LI C + +V+ V + +
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES 421
Query: 303 RRPCTILVPNM--------GGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQ 354
R+ L PN G + A+ V + +LP L+ CR G
Sbjct: 422 RK----LSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 355 TEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNS 414
+ A +LL ++ +R L + Y ++ +LC +VEEA +LF + G+ P + +Y +
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 415 VISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIH---AHGKVKNWKVAYDLLMEML 471
+I C G +D A + E M K CLP++LT+ ALIH A GK+K A L +M+
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE---ATLLEEKMV 594
Query: 472 GLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLE 531
+G P + T D +L + +L K G D AY + + ML
Sbjct: 595 KIGLQPTVST----DTIL--------------------IHRLLKDGDFDHAYSRFQQMLS 630
Query: 532 KGIHLSAYARDTFEHVFQKNGKLKIARQLLETTR 565
G A+ TF + + G+L A ++ R
Sbjct: 631 SGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR 664
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 181/435 (41%), Gaps = 76/435 (17%)
Query: 178 LGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESP 237
L R G + E ++ EM C P+ +N ++ CK + EE + +I P
Sbjct: 193 LARFGLVDEMKQVYMEMLEDKVC-PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDP 251
Query: 238 DTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKV 297
D ++ + I+G+C+ L +A ++F++M G A LI LC
Sbjct: 252 DFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCV----------- 300
Query: 298 RVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEE 357
RR I A+++F + + P+ L+ LC + E
Sbjct: 301 ----ARR---------------IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSE 341
Query: 358 AVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVIS 417
A+ L++ +EE + Y +++ +LC C+ E+A L G+ML GL P + YN++I+
Sbjct: 342 ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALIN 401
Query: 418 MLCTLG----------------------------------NLDHAMGVFELMNKKRCLPD 443
C G N+ AMGV M +++ LPD
Sbjct: 402 GYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPD 461
Query: 444 NLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTY-NLVDNLL---REHDRSDLCL 499
+TY +LI + N+ AY LL M G +P+ TY +++D+L R + DL
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521
Query: 500 KLERKLENHQ-------LQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNG 552
LE+K N + CK G++D A+ + ML K ++ + H +G
Sbjct: 522 SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG 581
Query: 553 KLKIARQLLETTRRV 567
KLK A L E ++
Sbjct: 582 KLKEATLLEEKMVKI 596
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 166/398 (41%), Gaps = 25/398 (6%)
Query: 180 RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES--- 236
+ G I +A+ + E ME+ P+ +N ++ CK + A+ + +KM
Sbjct: 405 KRGMIEDAVDVVELMESR-KLSPNTRTYNELIKGYCKSN-----VHKAMGVLNKMLERKV 458
Query: 237 -PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCS---LSEKKG 292
PD + + I G CR G +A + S MN G++P + +I LC + E
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 293 SVEKVRVRNTRRPCTILVPNMGG--NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELC 350
+ + + + + G +G + A + + + LP++ L+ LC
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Query: 351 RLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLG 410
G+ +EA L + + L I++ L + A + F +ML+ G KP
Sbjct: 579 ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAH 638
Query: 411 VYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEM 470
Y + I C G L A + M + PD TY++LI +G + A+D+L M
Sbjct: 639 TYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Query: 471 LGLGWIPELQTY-NLVDNLLREHDRSDLCLKL-ERKLENHQLQKLCKLGQLDAAYEKAKS 528
G P T+ +L+ +LL +K ++K +L + + + D E +
Sbjct: 699 RDTGCEPSQHTFLSLIKHLLE--------MKYGKQKGSEPELCAMSNMMEFDTVVELLEK 750
Query: 529 MLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTRR 566
M+E + +A + + + G L++A ++ + +R
Sbjct: 751 MVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQR 788
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 152/351 (43%), Gaps = 40/351 (11%)
Query: 209 NVLYVL--CKKQSSEETIELALRIFHKMESPDTYSCGNTIVG-FCRLGRLGAALEIFSQM 265
+ LYVL C+K + +E EL ++ C NT++ R G + +++ +M
Sbjct: 158 DALYVLDLCRKMNKDERFELKYKLI--------IGCYNTLLNSLARFGLVDEMKQVYMEM 209
Query: 266 NKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAI----- 320
+ V P N ++ C L G+VE+ ++ L P+ + I
Sbjct: 210 LEDKVCPNIYTYNKMVNGYCKL----GNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQ 265
Query: 321 QPAVEVFWAVFNS----GLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEG 376
+ ++ + VFN G + L+ LC + +EA+ L +++ +
Sbjct: 266 RKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRT 325
Query: 377 YAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMN 436
Y +++K+LC + EA NL M G+KP + Y +I LC+ + A + M
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQML 385
Query: 437 KKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSD 496
+K +P+ +TY ALI+ + K + A D++ M P +TYN L++ + +S+
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYN---ELIKGYCKSN 442
Query: 497 -------LCLKLERKL------ENHQLQKLCKLGQLDAAYEKAKSMLEKGI 534
L LERK+ N + C+ G D+AY M ++G+
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 99/229 (43%), Gaps = 11/229 (4%)
Query: 345 LMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACG 404
L++ L R G +E ++ + E K+ Y ++ C VEEA+ +++ G
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG 248
Query: 405 LKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAY 464
L P Y S+I C +LD A VF M K C + + YT LIH + A
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308
Query: 465 DLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQ-----------KL 513
DL ++M P ++TY ++ L +R L L +++E ++ L
Sbjct: 309 DLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL 368
Query: 514 CKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLE 562
C + + A E MLEKG+ + + + + K G ++ A ++E
Sbjct: 369 CSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 129/317 (40%), Gaps = 18/317 (5%)
Query: 172 SICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIF 231
+I I L + G A S F++M + G KPD + + C++ + ++ ++
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSS-GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR 664
Query: 232 HKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSL--SE 289
SPD ++ + I G+ LG+ A ++ +M G P++ LI L + +
Sbjct: 665 ENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGK 724
Query: 290 KKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSEL 349
+KGS ++ C + N VE+ + + P+ KL+ +
Sbjct: 725 QKGSEPEL--------CAM------SNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGI 770
Query: 350 CRLGQTEEAVKLLRIVEERK-LTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPK 408
C +G A K+ ++ + ++ E + ++ C + EA+ + M+ G P+
Sbjct: 771 CEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQ 830
Query: 409 LGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLM 468
L +I L G + VF+ + + D L + +I GK + Y+L
Sbjct: 831 LESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFN 890
Query: 469 EMLGLGWIPELQTYNLV 485
M G QTY+L+
Sbjct: 891 VMEKNGCKFSSQTYSLL 907
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 171/376 (45%), Gaps = 22/376 (5%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
I L + R++EAL L EEM + GC PD FN+V+ LCK E ++ R+ +
Sbjct: 259 IHSLSKCNRVNEALQLLEEM-FLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG 317
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCS---LSEKK 291
+PD + G + G C++GR+ AA ++F ++ K P N LI + L + K
Sbjct: 318 FAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAK 373
Query: 292 GSVEKVRVRNTRRP--CTILVPNMG-GNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSE 348
+ + P CT G G + A+EV + N G P+ + L+
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDG 433
Query: 349 LCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPK 408
C+LG+ +EA +L + L G+ ++ A C ++ EA +F M G KP
Sbjct: 434 FCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 493
Query: 409 LGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLM 468
+ +NS+IS LC + + HA+ + M + + + +TY LI+A + K A L+
Sbjct: 494 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 553
Query: 469 EMLGLGWIPELQTYN-LVDNLLREHDRSDLCLKLERKLE----------NHQLQKLCKLG 517
EM+ G + TYN L+ L R + E+ L N + LC+ G
Sbjct: 554 EMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 613
Query: 518 QLDAAYEKAKSMLEKG 533
++ A E K M+ +G
Sbjct: 614 MVEEAVEFQKEMVLRG 629
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/468 (22%), Positives = 191/468 (40%), Gaps = 70/468 (14%)
Query: 111 LGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKA 170
L + ++ FSW G+Q G++ V + + LG F + LL+ + + G V ++
Sbjct: 89 LNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDE-GIVFKES 147
Query: 171 MSICI-RFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALR 229
+ I I R + G + L EM V+ C+P +N VL +L S ++A
Sbjct: 148 LFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILV----SGNCHKVAAN 203
Query: 230 IFHKMES----PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC 285
+F+ M S P ++ G + FC + + +AL + M K G +P LI L
Sbjct: 204 VFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLS 263
Query: 286 SLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKL 345
+ + A+++ +F G +P +
Sbjct: 264 KCNR------------------------------VNEALQLLEEMFLMGCVPDAETFNDV 293
Query: 346 MSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGL 405
+ LC+ + EA K++ + R + Y +M LC +V+ A +LF R+
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP---- 349
Query: 406 KPKLGVYNSVISMLCTLGNLDHAMGVF-ELMNKKRCLPDNLTYTALIHAHGKVKNWKVAY 464
KP++ ++N++I T G LD A V +++ +PD TY +LI+ + K +A
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 465 DLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYE 524
++L +M G P + +Y ++ + CKLG++D AY
Sbjct: 410 EVLHDMRNKGCKPNVYSYTIL------------------------VDGFCKLGKIDEAYN 445
Query: 525 KAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLL-ETTRRVQEPE 571
M G+ + + F K ++ A ++ E R+ +P+
Sbjct: 446 VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 493
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 176/394 (44%), Gaps = 26/394 (6%)
Query: 128 GFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEA 187
GF DD Y+ + L + D K L + + + + I HGR+ +A
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI----FNTLIHGFVTHGRLDDA 372
Query: 188 LSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES----PDTYSCG 243
++ +M T +G PD +N+++Y K E + LAL + H M + P+ YS
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGYWK----EGLVGLALEVLHDMRNKGCKPNVYSYT 428
Query: 244 NTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTR 303
+ GFC+LG++ A + ++M+ G+ P N LI C +VE R R
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR-EMPR 487
Query: 304 RPCTILVPNMGGNSGAIQPAVEV------FW---AVFNSGLLPSTFVVVKLMSELCRLGQ 354
+ C P++ + I EV W + + G++ +T L++ R G+
Sbjct: 488 KGCK---PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544
Query: 355 TEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNS 414
+EA KL+ + + E Y ++K LC +V++A +LF +ML G P N
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604
Query: 415 VISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLG 474
+I+ LC G ++ A+ + M + PD +T+ +LI+ + + + ++ G
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 475 WIPELQTYN-LVDNLLREHDRSDLCLKLERKLEN 507
P+ T+N L+ L + D CL L+ +E+
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIED 698
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 163/368 (44%), Gaps = 30/368 (8%)
Query: 184 IHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCG 243
I ALSL +M T GC P+++++ +++ L K E ++L +F PD +
Sbjct: 233 IDSALSLLRDM-TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 291
Query: 244 NTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTR 303
+ I+G C+ R+ A ++ ++M G P L+ LC + + + + + R +
Sbjct: 292 DVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIG-RVDAAKDLFYRIPK 350
Query: 304 RPCTILVPNMGG--NSGAIQPAVEVFWAVFNS-GLLPSTFVVVKLMSELCRLGQTEEAVK 360
I + G G + A V + S G++P L+ + G A++
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 361 LLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLC 420
+L + + Y I++ C +++EA N+ M A GLKP +N +IS C
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 421 TLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQ 480
+ A+ +F M +K C PD T+ +LI +V K A LL +M+ G +
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 481 TYN-LVDNLLREHDRSDLCLKLERKLENHQ---------------LQKLCKLGQLDAAYE 524
TYN L++ LR + +K RKL N ++ LC+ G++D
Sbjct: 531 TYNTLINAFLRRGE-----IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVD---- 581
Query: 525 KAKSMLEK 532
KA+S+ EK
Sbjct: 582 KARSLFEK 589
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 100/236 (42%), Gaps = 16/236 (6%)
Query: 183 RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSC 242
RI EA+ +F EM GCKPD FN+++ LC+ + + L + + +T +
Sbjct: 474 RIPEAVEIFREMPRK-GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532
Query: 243 GNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVR---- 298
I F R G + A ++ ++M G N LI LC + G V+K R
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC----RAGEVDKARSLFE 588
Query: 299 --VRNTRRP----CTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRL 352
+R+ P C IL+ + SG ++ AVE + G P L++ LCR
Sbjct: 589 KMLRDGHAPSNISCNILINGLC-RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 353 GQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPK 408
G+ E+ + + R ++ + + +M LC V +A L + G P
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 183/405 (45%), Gaps = 21/405 (5%)
Query: 183 RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSC 242
+ +A+ LF +M P + FN + + K + E + L ++ K + Y+
Sbjct: 68 KADDAVDLFRDMIQSRPL-PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTL 126
Query: 243 GNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC---SLSEKKGSVEKVRV 299
I FCR +L A ++ K+G P N L+ LC +SE V+++ V
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRM-V 185
Query: 300 RNTRRPCTILVPNMGGN---SGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTE 356
+P I + + +G + AV + + +G P+ +++ +C+ GQT
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 357 EAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVI 416
A++LLR +EER + Y+I++ LC ++ A NLF M G K + YN++I
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 417 SMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWI 476
C G D + M K++ P+ +T++ LI + K + A LL EM+ G
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 477 PELQTYN-LVDNLLREHDRSDLCLKLERKLE----------NHQLQKLCKLGQLDAAYEK 525
P TYN L+D +E+ + ++ + N + CK ++D E
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 526 AKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLE--TTRRVQ 568
+ M +G+ + +T F ++GKL++A++L + +RRV+
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 155/337 (45%), Gaps = 35/337 (10%)
Query: 163 KGKVSPKAM--SICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSS 220
K K+SP + S+ I + G++ EA L +EM G P+ + +N+++ CK+
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR-GIAPNTITYNSLIDGFCKENRL 384
Query: 221 EETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNML 280
EE I++ + K PD + I G+C+ R+ LE+F +M+ GV+ N L
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 281 IGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTF 340
+ C SG ++ A ++F + + + P
Sbjct: 445 VQGFCQ------------------------------SGKLEVAKKLFQEMVSRRVRPDIV 474
Query: 341 VVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRM 400
L+ LC G+ E+A+++ +E+ K+ Y I++ +C+ +V++A +LF +
Sbjct: 475 SYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL 534
Query: 401 LACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNW 460
G+K YN +IS LC +L A +F M ++ PD LTY LI AH +
Sbjct: 535 PLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDA 594
Query: 461 KVAYDLLMEMLGLGWIPELQTYNLVDNLLR--EHDRS 495
A +L+ EM G+ ++ T +V N+L E D+S
Sbjct: 595 TTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKS 631
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 173/393 (44%), Gaps = 25/393 (6%)
Query: 167 SPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIEL 226
S +SI I R ++ A S ++ + G +PD ++FN +L LC + E +EL
Sbjct: 122 SIYTLSIMINCFCRCRKLSYAFSTMGKIMKL-GYEPDTVIFNTLLNGLCLECRVSEALEL 180
Query: 227 ALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCS 286
R+ P + + G C G++ A+ + +M + G P ++ +C
Sbjct: 181 VDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCK 240
Query: 287 LSEKKGSVE---KVRVRNTRRPC---TILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTF 340
+ ++E K+ RN + +I++ + + G++ A +F + G
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD-GSLDNAFNLFNEMEIKGFKADII 299
Query: 341 VVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRM 400
L+ C G+ ++ KLLR + +RK++ +++++ + ++ EA L M
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Query: 401 LACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNW 460
+ G+ P YNS+I C L+ A+ + +LM K C PD +T+ LI+ + K
Sbjct: 360 MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRI 419
Query: 461 KVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQ----------- 509
+L EM G I TYN + + + ++ KL +++ + +
Sbjct: 420 DDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKIL 479
Query: 510 LQKLCKLGQLDAA------YEKAKSMLEKGIHL 536
L LC G+L+ A EK+K L+ GI++
Sbjct: 480 LDGLCDNGELEKALEIFGKIEKSKMELDIGIYM 512
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 156/372 (41%), Gaps = 44/372 (11%)
Query: 181 HGRIHEALSLFEEM-ETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDT 239
+G++ +A+ L + M ET G +P+ + + VL V+CK + +EL ++ + D
Sbjct: 206 NGKVSDAVVLIDRMVET--GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 263
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRV 299
I G C+ G L A +F++M G N LIG C
Sbjct: 264 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC-------------- 309
Query: 300 RNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAV 359
N+G ++ + + P+ L+ + G+ EA
Sbjct: 310 ----------------NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 360 KLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISML 419
+LL+ + +R + Y ++ C ++EEA + M++ G P + +N +I+
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 420 CTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPEL 479
C +D + +F M+ + + + +TY L+ + +VA L EM+ P++
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 480 QTYNLVDNLLREHDRSDLCLKLERKLENHQLQ-----------KLCKLGQLDAAYEKAKS 528
+Y ++ + L ++ + L++ K+E +++ +C ++D A++ S
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533
Query: 529 MLEKGIHLSAYA 540
+ KG+ L A A
Sbjct: 534 LPLKGVKLDARA 545
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 134/331 (40%), Gaps = 31/331 (9%)
Query: 155 LLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVL 214
LL + + K+ SI I L + G + A +LF EME + G K D + +N ++
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME-IKGFKADIITYNTLIGGF 308
Query: 215 CKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTR 274
C ++ +L + + SP+ + I F + G+L A ++ +M + G+ P
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 275 SAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSG 334
N LI C ++ A+++ + + G
Sbjct: 369 ITYNSLIDGFCK------------------------------ENRLEEAIQMVDLMISKG 398
Query: 335 LLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEAS 394
P L++ C+ + ++ ++L R + R + Y +++ C ++E A
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 395 NLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAH 454
LF M++ ++P + Y ++ LC G L+ A+ +F + K + D Y +IH
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGM 518
Query: 455 GKVKNWKVAYDLLMEMLGLGWIPELQTYNLV 485
A+DL + G + + YN++
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKLDARAYNIM 549
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 172/408 (42%), Gaps = 31/408 (7%)
Query: 96 LSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCL 155
++S FV RVL + +L FF+WA + + E +A L K ++ M +
Sbjct: 75 VTSEFVFRVLRATSR-SSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKI 133
Query: 156 LMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLC 215
L + +S + + I G++G + +A+ LF + GC+ V+N++L+ LC
Sbjct: 134 LKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALC 193
Query: 216 KKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRS 275
+ L R+ K PD + + G+C G++ A E +M++ G P
Sbjct: 194 DVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPAR 253
Query: 276 AVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGL 335
++LI L N+G ++ A E+ + G
Sbjct: 254 GRDLLIEGLL------------------------------NAGYLESAKEMVSKMTKGGF 283
Query: 336 LPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASN 395
+P L+ + + G+ E +++ + L + Y ++ A+ +++EA
Sbjct: 284 VPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFR 343
Query: 396 LFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHG 455
L + G KP +Y +I +C G D A F M K P+ YT LI G
Sbjct: 344 LLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCG 403
Query: 456 KVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLER 503
+ + A + L+EM +G +P + +++V + L+ + DL +++E+
Sbjct: 404 RGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIEQ 451
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 161/394 (40%), Gaps = 59/394 (14%)
Query: 181 HG-RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDT 239
HG RI EA++L ++M + G +PD + F +++ L + + E + L R+ K PD
Sbjct: 147 HGNRISEAVALVDQMVEM-GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL 205
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRV 299
+ G I G C+ G AL + ++M K + + +I LC
Sbjct: 206 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRH---------- 255
Query: 300 RNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAV 359
+ A+ +F + N G+ P F L+S LC G+ +A
Sbjct: 256 --------------------VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295
Query: 360 KLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISML 419
+LL + ERK+ + ++ A ++ EA LF M+ + P + YNS+I+
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Query: 420 CTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPEL 479
C LD A +F LM K CLPD +TY LI+ K K +L +M G +
Sbjct: 356 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415
Query: 480 QTYN-LVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSA 538
TY L+ + D D A K M+ G+H +
Sbjct: 416 VTYTTLIHGFFQASD-------------------------CDNAQMVFKQMVSDGVHPNI 450
Query: 539 YARDTFEHVFQKNGKLKIARQLLETTRRVQ-EPE 571
+T KNGKL+ A + E ++ + EP+
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 158/372 (42%), Gaps = 43/372 (11%)
Query: 162 QKGKVSPKAM--SICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQS 219
+KGK+ + S I L ++ + +AL+LF EM+ G +PD +++++ LC
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK-GIRPDVFTYSSLISCLCNYGR 290
Query: 220 SEETIEL-------------------------------ALRIFHKME----SPDTYSCGN 244
+ L A ++F +M P+ + +
Sbjct: 291 WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 350
Query: 245 TIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRR 304
I GFC RL A +IF+ M LP N LI C + +E R + R
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410
Query: 305 PCTILVPNMGGNSGAIQP-----AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAV 359
V G Q A VF + + G+ P+ L+ LC+ G+ E+A+
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 360 KLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISML 419
+ +++ K+ Y I+ + +C +VE+ +LF + G+KP + YN++IS
Sbjct: 471 VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGF 530
Query: 420 CTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPEL 479
C G + A +F M + LPD+ TY LI AH + + + +L+ EM + +
Sbjct: 531 CKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDA 590
Query: 480 QTYNLVDNLLRE 491
TY LV ++L +
Sbjct: 591 STYGLVTDMLHD 602
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 22/329 (6%)
Query: 181 HGRIHEALSLFEEM--ETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKME--- 235
H ++ EA+ LF EM F P + F+ +L + K + +L + KME
Sbjct: 43 HLKLDEAVDLFGEMVKSRPF---PSIVEFSKLLSAIAKMKK----FDLVISFGEKMEILG 95
Query: 236 -SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCS---LSEKK 291
S + Y+ I CR +L AL I +M K+G P+ +N L+ C +SE
Sbjct: 96 VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155
Query: 292 GSVEKVRVRNTRRPCTI----LVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMS 347
V+++ V +P T+ LV + ++ A + AV + + G P +++
Sbjct: 156 ALVDQM-VEMGYQPDTVTFTTLVHGLFQHNKASE-AVALVERMVVKGCQPDLVTYGAVIN 213
Query: 348 ELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKP 407
LC+ G+ + A+ LL +E+ K+ Y+ V+ +LC + V++A NLF M G++P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 408 KLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLL 467
+ Y+S+IS LC G A + M +++ P+ +T+ +LI A K A L
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 468 MEMLGLGWIPELQTYNLVDNLLREHDRSD 496
EM+ P + TYN + N HDR D
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 107/253 (42%), Gaps = 11/253 (4%)
Query: 320 IQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAI 379
+ AV++F + S PS KL+S + ++ + + + +E ++ Y I
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 380 VMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKR 439
++ LC Q+ A + G+M+ G P + NS+++ C + A+ + + M +
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 440 CLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCL 499
PD +T+T L+H + A L+ M+ G P+L TY V N L + DL L
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 500 KLERKLENHQLQ-----------KLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVF 548
L K+E +++ LCK +D A M KGI + +
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 549 QKNGKLKIARQLL 561
G+ A +LL
Sbjct: 286 CNYGRWSDASRLL 298
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 102/249 (40%), Gaps = 25/249 (10%)
Query: 323 AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMK 382
A+ + + G PS + L++ C + EAV L+ + E + ++
Sbjct: 119 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 178
Query: 383 ALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLP 442
L H + EA L RM+ G +P L Y +VI+ LC G D A+ + M K +
Sbjct: 179 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 238
Query: 443 DNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLE 502
D + Y+ +I + K ++ A +L EM G P++ TY+ +
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL----------------- 281
Query: 503 RKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLL- 561
+ LC G+ A MLE+ I+ + ++ F K GKL A +L
Sbjct: 282 -------ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 562 ETTRRVQEP 570
E +R +P
Sbjct: 335 EMIQRSIDP 343
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 154/345 (44%), Gaps = 43/345 (12%)
Query: 237 PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEK 296
PDT + I G C GR+ ALE+ +M ++G PT +N L+ LC
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL---------- 189
Query: 297 VRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTE 356
+G + AV + + +G P+ ++ +C+ GQT
Sbjct: 190 --------------------NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 357 EAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVI 416
A++LLR +EERK+ Y+I++ LC ++ A NLF M G K + +Y ++I
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 417 SMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWI 476
C G D + M K++ PD + ++ALI K + A +L EM+ G
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 477 PELQTY-NLVDNLLREH--DRSDLCLKL--------ERKLENHQLQKLCKLGQLDAAYEK 525
P+ TY +L+D +E+ D+++ L L + N + CK +D E
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 526 AKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLE--TTRRVQ 568
+ M +G+ +T F + GKL++A++L + +RRV+
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 145/331 (43%), Gaps = 33/331 (9%)
Query: 163 KGKVSPK--AMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSS 220
K K++P A S I + G++ EA L +EM G PD + + +++ CK+
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEM-IQRGISPDTVTYTSLIDGFCKENQL 368
Query: 221 EETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNML 280
++ + + K P+ + I G+C+ + LE+F +M+ GV+ N L
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 281 IGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTF 340
I C L G ++ A E+F + + + P
Sbjct: 429 IQGFCEL------------------------------GKLEVAKELFQEMVSRRVRPDIV 458
Query: 341 VVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRM 400
L+ LC G+ E+A+++ +E+ K+ Y I++ +C+ +V++A +LF +
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 518
Query: 401 LACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNW 460
G+KP + YN +I LC G+L A +F M + P+ TY LI AH +
Sbjct: 519 PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDA 578
Query: 461 KVAYDLLMEMLGLGWIPELQTYNLVDNLLRE 491
+ L+ E+ G+ + T +V ++L +
Sbjct: 579 TKSAKLIEEIKRCGFSVDASTVKMVVDMLSD 609
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/389 (19%), Positives = 166/389 (42%), Gaps = 53/389 (13%)
Query: 198 FGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGA 257
G +PD + F+ ++ LC + E +EL R+ P + + G C G++
Sbjct: 136 LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSD 195
Query: 258 ALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRR------PCTILVP 311
A+ + +M + G P ++ +C + ++E +R R+ +I++
Sbjct: 196 AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIID 255
Query: 312 NMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLT 371
+ + G++ A +F + G + L+ C G+ ++ KLLR + +RK+T
Sbjct: 256 GLCKD-GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 372 -----------C-VEEG-----------------------YAIVMKALCDHCQVEEASNL 396
C V+EG Y ++ C Q+++A+++
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 397 FGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGK 456
M++ G P + +N +I+ C +D + +F M+ + + D +TY LI +
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 457 VKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQ----- 511
+ +VA +L EM+ P++ +Y ++ + L ++ + L++ K+E +++
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 512 ------KLCKLGQLDAAYEKAKSMLEKGI 534
+C ++D A++ S+ KG+
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGV 523
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 161/389 (41%), Gaps = 56/389 (14%)
Query: 183 RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSC 242
RI EA++L ++M V G +P+ + FN +++ L + E + L R+ K PD +
Sbjct: 166 RISEAVALVDQM-FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 224
Query: 243 GNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNT 302
G + G C+ G A + ++M + + P N +I LC
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH------------- 271
Query: 303 RRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLL 362
+ A+ +F + G+ P+ L+S LC G+ +A +LL
Sbjct: 272 -----------------MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL 314
Query: 363 RIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTL 422
+ ERK+ ++ ++ A ++ EA L+ M+ + P + Y+S+I+ C
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374
Query: 423 GNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTY 482
LD A +FE M K C PD +TY LI K K + ++ EM G + TY
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Query: 483 NLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARD 542
N++ +Q L + G D A E K M+ G+ + +
Sbjct: 435 NIL------------------------IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 543 TFEHVFQKNGKLKIARQLLETTRRVQ-EP 570
T KNGKL+ A + E +R + EP
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 172/398 (43%), Gaps = 34/398 (8%)
Query: 94 GDLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMK 153
G L N ++ L Y+H+ A LN F T+ G + + + L + D
Sbjct: 255 GVLIYNTIIDGLCKYKHMDDA--LNLFKEMETK-GIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 154 CLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYV 213
LL + +K S I + G++ EA L++EM P + +++++
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM-VKRSIDPSIVTYSSLING 370
Query: 214 LCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPT 273
C +E ++ + K PD + I GFC+ R+ +E+F +M++ G++
Sbjct: 371 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430
Query: 274 RSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNS 333
N+LI L +G A E+F + +
Sbjct: 431 TVTYNILIQGLF------------------------------QAGDCDMAQEIFKEMVSD 460
Query: 334 GLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEA 393
G+ P+ L+ LC+ G+ E+A+ + ++ K+ Y I+++ +C +VE+
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 394 SNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHA 453
+LF + G+KP + YN++IS C G+ + A +F+ M + LP++ Y LI A
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 454 HGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLRE 491
+ + + + +L+ EM G+ + T LV N+L +
Sbjct: 581 RLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD 618
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 108/256 (42%), Gaps = 17/256 (6%)
Query: 320 IQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAI 379
+ AV +F + S PS KL+S + ++ + + + L ++ + Y+I
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 380 VMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKR 439
++ C Q+ A + G+M+ G +P + +S+++ C + A+ + + M
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 440 CLPDNLTYTALIHA---HGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSD 496
P+ +T+ LIH H K A L+ M+ G P+L TY +V N L + +D
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASE---AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 497 LCLKLERKLENHQLQK-----------LCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFE 545
L L K+E +L+ LCK +D A K M KGI + +
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 546 HVFQKNGKLKIARQLL 561
G+ A +LL
Sbjct: 299 SCLCNYGRWSDASRLL 314
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 155/386 (40%), Gaps = 42/386 (10%)
Query: 187 ALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTI 246
A+ +F E V C + +N V++ +C+ +E L L + K +PD S +
Sbjct: 230 AIIVFREFPEVGVCW-NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 247 VGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPC 306
G+CR G L ++ M + G+ P +IG LC R C
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC------------------RIC 330
Query: 307 TILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVE 366
+ A E F + G+LP T V L+ C+ G A K +
Sbjct: 331 ------------KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 367 ERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLD 426
R +T Y ++ C + EA LF M GL+P + +I+ C G++
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 427 HAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVD 486
A V M + C P+ +TYT LI K + A +LL EM +G P + TYN +
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 487 NLLREHDRSDLCLKLERKLENHQL-----------QKLCKLGQLDAAYEKAKSMLEKGIH 535
N L + + +KL + E L CK G++D A E K ML KG+
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 536 LSAYARDTFEHVFQKNGKLKIARQLL 561
+ + + F +G L+ +LL
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLL 584
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 31/304 (10%)
Query: 182 GRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYS 241
G + EA LF EM G +PD++ F ++ CK ++ + + SP+ +
Sbjct: 400 GDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 242 CGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRN 301
I G C+ G L +A E+ +M KIG+ P N ++ LC
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC---------------- 502
Query: 302 TRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKL 361
SG I+ AV++ +GL T LM C+ G+ ++A ++
Sbjct: 503 --------------KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 362 LRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCT 421
L+ + + L + ++M C H +E+ L MLA G+ P +NS++ C
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 422 LGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQT 481
NL A +++ M + PD TY L+ H K +N K A+ L EM G G+ + T
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 482 YNLV 485
Y+++
Sbjct: 669 YSVL 672
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 189/448 (42%), Gaps = 52/448 (11%)
Query: 170 AMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALR 229
+ +I I F+ + GRI EA L ME + G PD + ++ V+ C+ ++ +L
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLME-LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 230 IFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSE 289
+ K P++Y G+ I CR+ +L A E FS+M + G+LP LI C +
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 290 KKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQ-----PAVEVFWAVFNSGLLPSTFVVVK 344
+ + + ++R ++ SG Q A ++F +F GL P + +
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 345 LMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACG 404
L++ C+ G ++A ++ + + + Y ++ LC ++ A+ L M G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 405 LKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAY 464
L+P + YNS+++ LC GN++ A+ + D +TYT L+ A+ K A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 465 DLLMEMLGLGWIPELQTYNLVDN------LLREHDR---------------------SDL 497
++L EMLG G P + T+N++ N +L + ++
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 498 CLKLERKLENHQLQKLCK--LGQLDAAYE-------KAKSMLE----------KGIHLSA 538
C++ K + +C +G YE KA++M E KG +S
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 539 YARDTFEHVFQKNGKLKIARQLLETTRR 566
F K K AR++ + RR
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRR 694
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 155/386 (40%), Gaps = 42/386 (10%)
Query: 187 ALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTI 246
A+ +F E V C + +N V++ +C+ +E L L + K +PD S +
Sbjct: 230 AIIVFREFPEVGVCW-NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 247 VGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPC 306
G+CR G L ++ M + G+ P +IG LC R C
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC------------------RIC 330
Query: 307 TILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVE 366
+ A E F + G+LP T V L+ C+ G A K +
Sbjct: 331 ------------KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 367 ERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLD 426
R +T Y ++ C + EA LF M GL+P + +I+ C G++
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 427 HAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVD 486
A V M + C P+ +TYT LI K + A +LL EM +G P + TYN +
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 487 NLLREHDRSDLCLKLERKLENHQL-----------QKLCKLGQLDAAYEKAKSMLEKGIH 535
N L + + +KL + E L CK G++D A E K ML KG+
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 536 LSAYARDTFEHVFQKNGKLKIARQLL 561
+ + + F +G L+ +LL
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLL 584
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 31/304 (10%)
Query: 182 GRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYS 241
G + EA LF EM G +PD++ F ++ CK ++ + + SP+ +
Sbjct: 400 GDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 242 CGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRN 301
I G C+ G L +A E+ +M KIG+ P N ++ LC
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC---------------- 502
Query: 302 TRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKL 361
SG I+ AV++ +GL T LM C+ G+ ++A ++
Sbjct: 503 --------------KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 362 LRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCT 421
L+ + + L + ++M C H +E+ L MLA G+ P +NS++ C
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 422 LGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQT 481
NL A +++ M + PD TY L+ H K +N K A+ L EM G G+ + T
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 482 YNLV 485
Y+++
Sbjct: 669 YSVL 672
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 189/448 (42%), Gaps = 52/448 (11%)
Query: 170 AMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALR 229
+ +I I F+ + GRI EA L ME + G PD + ++ V+ C+ ++ +L
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLME-LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 230 IFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSE 289
+ K P++Y G+ I CR+ +L A E FS+M + G+LP LI C +
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 290 KKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQ-----PAVEVFWAVFNSGLLPSTFVVVK 344
+ + + ++R ++ SG Q A ++F +F GL P + +
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 345 LMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACG 404
L++ C+ G ++A ++ + + + Y ++ LC ++ A+ L M G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 405 LKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAY 464
L+P + YNS+++ LC GN++ A+ + D +TYT L+ A+ K A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 465 DLLMEMLGLGWIPELQTYNLVDN------LLREHDR---------------------SDL 497
++L EMLG G P + T+N++ N +L + ++
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 498 CLKLERKLENHQLQKLCK--LGQLDAAYE-------KAKSMLE----------KGIHLSA 538
C++ K + +C +G YE KA++M E KG +S
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 539 YARDTFEHVFQKNGKLKIARQLLETTRR 566
F K K AR++ + RR
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRR 694
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 170/366 (46%), Gaps = 17/366 (4%)
Query: 117 LNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDM-KCLLMTVASQKGKVSPKAMSICI 175
+ FF WAG + FQ D S + L +L+ +M + + V + VSP +S +
Sbjct: 110 IQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELV 169
Query: 176 RFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKME 235
+ LGR + +ALS+F + + CKP + +N+V+ +L ++ E+ E+ + ++ +
Sbjct: 170 KALGRAKMVSKALSVFYQAKGR-KCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGD 228
Query: 236 S-PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV 294
PDT + I + +LGR +A+ +F +M + PT L+G + K G V
Sbjct: 229 CFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLG----IYFKVGKV 284
Query: 295 EK---VRVRNTRRPCTILVPNMG------GNSGAIQPAVEVFWAVFNSGLLPSTFVVVKL 345
EK + R C+ V G +G + A + + GL P + L
Sbjct: 285 EKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNL 344
Query: 346 MSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCD-HCQVEEASNLFGRMLACG 404
M+ L ++G+ EE + + + T Y V+KAL + V E S+ F +M A
Sbjct: 345 MNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADS 404
Query: 405 LKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAY 464
+ P Y+ +I C ++ A+ + E M++K P Y +LI+A GK K ++ A
Sbjct: 405 VSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAAN 464
Query: 465 DLLMEM 470
+L E+
Sbjct: 465 ELFKEL 470
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 126/296 (42%), Gaps = 13/296 (4%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
+ LG+ GR+ E ++F EM ++ C P + +N V+ L + ++ + F KM
Sbjct: 345 MNILGKVGRVEELTNVFSEM-GMWRCTPTVVSYNTVIKALFESKAHVSEVS---SWFDKM 400
Query: 235 E----SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEK 290
+ SP ++ I G+C+ R+ AL + +M++ G P +A LI L
Sbjct: 401 KADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY 460
Query: 291 KGSVE-----KVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKL 345
+ + E K N ++ G G + AV++F + N G P + L
Sbjct: 461 EAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNAL 520
Query: 346 MSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGL 405
MS + + G EA LLR +EE + I++ A +F + G+
Sbjct: 521 MSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGI 580
Query: 406 KPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWK 461
KP YN+++ G + A + M K D +TY++++ A G V + K
Sbjct: 581 KPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEK 636
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 1/168 (0%)
Query: 325 EVFWAVFNSG-LLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKA 383
EV+ + N G P T L+S +LG+ + A++L +++ + E+ Y ++
Sbjct: 218 EVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGI 277
Query: 384 LCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPD 443
+VE+A +LF M G P + Y +I L G +D A G ++ M + PD
Sbjct: 278 YFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPD 337
Query: 444 NLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLRE 491
+ L++ GKV + ++ EM P + +YN V L E
Sbjct: 338 VVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFE 385
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 128/528 (24%), Positives = 215/528 (40%), Gaps = 77/528 (14%)
Query: 116 TLNFFSWAGTQMGFQFDDSV--VEYMADFLGRRKLFDDMKCLLMTVASQKGKVS------ 167
L F W Q G + D V V L R +++D + +L ++ GK S
Sbjct: 93 ALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGAL 152
Query: 168 ----------PKAMSICIRFLGRHGRIHEALSLFEEM------ETVFGCK---------- 201
P I IR R G I ++L +F M +V+ C
Sbjct: 153 MTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG 212
Query: 202 ------------------PDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCG 243
PD FN ++ VLC + S E++ L ++ +P +
Sbjct: 213 EDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYN 272
Query: 244 NTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTR 303
+ +C+ GR AA+E+ M GV NMLI +LC + + + +R+ R
Sbjct: 273 TVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR--SNRIAKGYLLLRDMR 330
Query: 304 RPCTILVPN-------MGG--NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQ 354
+ ++ PN + G N G + A ++ + + GL P+ L+ G
Sbjct: 331 K--RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 388
Query: 355 TEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNS 414
+EA+K+ ++E + LT E Y +++ LC + + + A + RM G+ Y
Sbjct: 389 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 448
Query: 415 VISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLG 474
+I LC G LD A+ + M+K PD +TY+ALI+ KV +K A +++ + +G
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508
Query: 475 WIPELQTYN-LVDN-----LLREHDRSDLCLKLERKLENH-----QLQKLCKLGQLDAAY 523
P Y+ L+ N L+E R + LE +H + LCK G++ A
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 568
Query: 524 EKAKSMLEKGIHLSAYARDTFEHVFQKNGK-LKIARQLLETTRRVQEP 570
E + M GI + + D + + +G+ LK E T+ P
Sbjct: 569 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHP 616
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 196/473 (41%), Gaps = 45/473 (9%)
Query: 132 DDSVVEYMADF-----LGRRKLFDDMKCLLMTVA-SQKGKVSPKAMSICIRFLGRHGRIH 185
D +V Y A +GR K ++ C + V S G + + C R G +
Sbjct: 475 DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM----GCLK 530
Query: 186 EALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNT 245
EA+ ++E M + G D+ FN ++ LCK E E + P+T S
Sbjct: 531 EAIRIYEAM-ILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 589
Query: 246 IVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC-------------SLSEKKG 292
I G+ G A +F +M K+G PT L+ LC SL
Sbjct: 590 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 649
Query: 293 SVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRL 352
+V+ V + NT L+ M SG + AV +F + +LP ++ L+S LCR
Sbjct: 650 AVDTV-MYNT------LLTAMC-KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 701
Query: 353 GQTEEAVKLLRIVEERKLTCVEE-GYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGV 411
G+T A+ + E R + Y + + Q + +M G P +
Sbjct: 702 GKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVT 761
Query: 412 YNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEML 471
N++I +G ++ + M + P+ TY L+H + K K+ ++ L ++
Sbjct: 762 TNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSII 821
Query: 472 GLGWIPE-LQTYNLV-----DNLLR---EHDRSDLC--LKLERKLENHQLQKLCKLGQLD 520
G +P+ L ++LV N+L + ++ +C ++++R N + K C G+++
Sbjct: 822 LNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEIN 881
Query: 521 AAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLL-ETTRRVQEPEE 572
A++ K M GI L D V +N + + +R +L E +++ PE
Sbjct: 882 WAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPES 934
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 120/293 (40%), Gaps = 44/293 (15%)
Query: 164 GKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEET 223
G+++ M I L ++G + EA+ L EM G PD + ++ ++ CK +
Sbjct: 442 GRITYTGM---IDGLCKNGFLDEAVVLLNEMSKD-GIDPDIVTYSALINGFCKVGRFKTA 497
Query: 224 IELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGE 283
E+ RI+ SP+ I CR+G L A+ I+ M G N+L+
Sbjct: 498 KEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTS 557
Query: 284 LCSLSEKKGSVEKVRVRNTRR--PCTI---LVPNMGGNSGAIQPAVEVFWAVFNSGLLPS 338
LC + + E +R + P T+ + N GNSG A VF + G P+
Sbjct: 558 LCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPT 617
Query: 339 TFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFG 398
F L+ LC+ G EA K L + L V VM
Sbjct: 618 FFTYGSLLKGLCKGGHLREAEKFL-----KSLHAVPAAVDTVM----------------- 655
Query: 399 RMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALI 451
YN++++ +C GNL A+ +F M ++ LPD+ TYT+LI
Sbjct: 656 -------------YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 695
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 133/309 (43%), Gaps = 8/309 (2%)
Query: 180 RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDT 239
R G+I + L EM G P+ +N +L+ K++ + L I PD
Sbjct: 771 RMGKIEKTNDLLPEMGNQNG-GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDK 829
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRV 299
+C + ++G C L L+I GV R NMLI + C+ E + + V+V
Sbjct: 830 LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKV 889
Query: 300 RNT------RRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLG 353
+ + C +V + N Q + V + G+ P + + L++ LCR+G
Sbjct: 890 MTSLGISLDKDTCDAMVSVLNRNH-RFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 948
Query: 354 QTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYN 413
+ A + + K+ + +++AL + +EA+ L ML L P + +
Sbjct: 949 DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFT 1008
Query: 414 SVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGL 473
+++ + C GN+ A+ + +M+ D ++Y LI + +A++L EM G
Sbjct: 1009 TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGD 1068
Query: 474 GWIPELQTY 482
G++ TY
Sbjct: 1069 GFLANATTY 1077
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 157/407 (38%), Gaps = 68/407 (16%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
I G++ A L EM + FG P+++ FN L SE + AL++F+ M
Sbjct: 345 INGFSNEGKVLIASQLLNEMLS-FGLSPNHVTFN----ALIDGHISEGNFKEALKMFYMM 399
Query: 235 E----SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEK 290
E +P S G + G C+ A + +M + GV R +I LC K
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC----K 455
Query: 291 KGSVEKVRVRNTRRPCTILVPNMGGNS---------GAIQPAVEVFWAVFNSGLLPSTFV 341
G +++ V + P++ S G + A E+ ++ GL P+ +
Sbjct: 456 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 515
Query: 342 VVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRML 401
L+ CR+G +EA+ RI E L EG+ DH
Sbjct: 516 YSTLIYNCCRMGCLKEAI---RIYEAMIL----EGHTR------DHF------------- 549
Query: 402 ACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWK 461
+N +++ LC G + A M LP+ +++ LI+ +G
Sbjct: 550 ---------TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL 600
Query: 462 VAYDLLMEMLGLGWIPELQTY-NLVDNL-----LREHDRSDLCL-----KLERKLENHQL 510
A+ + EM +G P TY +L+ L LRE ++ L ++ + N L
Sbjct: 601 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 660
Query: 511 QKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIA 557
+CK G L A M+++ I +Y + + GK IA
Sbjct: 661 TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIA 707
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/381 (19%), Positives = 156/381 (40%), Gaps = 18/381 (4%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
I L R G+ A+ +E E P+ +++ + + K + I ++ +
Sbjct: 695 ISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 754
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV 294
+PD + I G+ R+G++ ++ +M P + N+L+ + S
Sbjct: 755 HTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSF 814
Query: 295 EKVR--VRNTRRP----CTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSE 348
R + N P C LV + S ++ +++ A G+ + L+S+
Sbjct: 815 LLYRSIILNGILPDKLTCHSLVLGIC-ESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 873
Query: 349 LCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPK 408
C G+ A L++++ ++ ++ ++ L + + +E+ + M G+ P+
Sbjct: 874 CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 933
Query: 409 LGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLM 468
Y +I+ LC +G++ A V E M + P N+ +A++ A K A LL
Sbjct: 934 SRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLR 993
Query: 469 EMLGLGWIPELQTY-----------NLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLG 517
ML + +P + ++ N+++ L S+ LKL+ N + LC G
Sbjct: 994 FMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKG 1053
Query: 518 QLDAAYEKAKSMLEKGIHLSA 538
+ A+E + M G +A
Sbjct: 1054 DMALAFELYEEMKGDGFLANA 1074
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 154/355 (43%), Gaps = 45/355 (12%)
Query: 181 HG-RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDT 239
HG RI EA++L ++M V +P+ + FN +++ L + E + L R+ + PD
Sbjct: 162 HGKRISEAVALVDQM-FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL 220
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRV 299
++ G + G C+ G + AL + +M K + +I LC
Sbjct: 221 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC-------------- 266
Query: 300 RNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAV 359
N + A+ +F + N G+ P+ L+ LC G+ +A
Sbjct: 267 ----------------NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 310
Query: 360 KLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISML 419
+LL + ERK+ ++ ++ A ++ EA L+ M+ + P + Y+S+I+
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 420 CTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPEL 479
C LD A +FELM K C P+ +TY LI K K + +L EM G +
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Query: 480 QTYN-LVDNLLREHDRSDLCLKLERKLENHQ-----------LQKLCKLGQLDAA 522
TYN L+ L + D D+ K+ +K+ + L LCK G+L+ A
Sbjct: 431 VTYNTLIQGLFQAGD-CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 153/321 (47%), Gaps = 10/321 (3%)
Query: 183 RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSC 242
++ +A+ LF EM P + FN +L + K + I L R+ + S D YS
Sbjct: 60 KLDDAVDLFGEMVQSRPL-PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY 118
Query: 243 GNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC---SLSEKKGSVEKVRV 299
I FCR +L AL + +M K+G P ++ L+ C +SE V+++ V
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 300 RNTRRPCTI----LVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQT 355
+P T+ L+ + ++ A + AV + + G P F +++ LC+ G
Sbjct: 179 MEY-QPNTVTFNTLIHGLFLHNKASE-AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 356 EEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSV 415
+ A+ LL+ +E+ K+ Y ++ ALC++ V +A NLF M G++P + YNS+
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 416 ISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGW 475
I LC G A + M +++ P+ +T++ALI A K A L EM+
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 476 IPELQTYNLVDNLLREHDRSD 496
P++ TY+ + N HDR D
Sbjct: 357 DPDIFTYSSLINGFCMHDRLD 377
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 155/347 (44%), Gaps = 15/347 (4%)
Query: 156 LMTVASQKGKVSPKAMSI--CIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYV 213
L T KG + P ++ IR L +GR +A L +M P+ + F+ ++
Sbjct: 277 LFTEMDNKG-IRPNVVTYNSLIRCLCNYGRWSDASRLLSDM-IERKINPNVVTFSALIDA 334
Query: 214 LCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPT 273
K+ E +L + + PD ++ + I GFC RL A +F M P
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 274 RSAVNMLIGELCSLSEKKGSVEKVR-------VRNTRRPCTILVPNMGGNSGAIQPAVEV 326
N LI C + +E R V NT T++ +G A ++
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF--QAGDCDMAQKI 452
Query: 327 FWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCD 386
F + + G+ P L+ LC+ G+ E+A+ + +++ K+ Y I+++ +C
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 387 HCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLT 446
+VE+ +LF + G+KP + +Y ++IS C G + A +F M + LP++ T
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
Query: 447 YTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHD 493
Y LI A + + + +L+ EM G++ + T ++V N+L HD
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML--HD 617
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 138/330 (41%), Gaps = 42/330 (12%)
Query: 254 RLGAALEIFSQMNKIGVLPTRSAVNMLIGELC---------SLSEKKGSVEKVRVRNTRR 304
+L A+++F +M + LP+ N L+ + SL E+ ++ +R+
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGER---MQNLRISYDLY 116
Query: 305 PCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLR- 363
IL+ N + A+ V + G P + L++ C + EAV L+
Sbjct: 117 SYNILI-NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 175
Query: 364 -IVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTL 422
V E + V + ++ L H + EA L RM+A G +P L Y +V++ LC
Sbjct: 176 MFVMEYQPNTVT--FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 423 GNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTY 482
G++D A+ + + M K + D + YT +I A KN A +L EM G P + TY
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 483 NLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARD 542
N +L+R CL C G+ A M+E+ I+ +
Sbjct: 294 N---SLIR-------CL--------------CNYGRWSDASRLLSDMIERKINPNVVTFS 329
Query: 543 TFEHVFQKNGKLKIARQLL-ETTRRVQEPE 571
F K GKL A +L E +R +P+
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/458 (21%), Positives = 195/458 (42%), Gaps = 43/458 (9%)
Query: 117 LNFFSWAGTQMGFQF--DDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSIC 174
+ F W ++ +F + L R ++F++++ +L + ++ K++ +A+S
Sbjct: 81 VKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHV 140
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
+ G + +A+ +++ + ++ PD + N++L +L K + + ++ + +
Sbjct: 141 LHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRG 200
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV 294
+S D YS + G C G++ ++ G +P N +IG C L
Sbjct: 201 DSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKL------- 253
Query: 295 EKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQ 354
G I+ A VF + G +P+ +++ C+ G
Sbjct: 254 -----------------------GDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGD 290
Query: 355 TEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNS 414
+ +LL V+ER L ++ A H + + G ++A KP + YN
Sbjct: 291 FVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNI 350
Query: 415 VISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLG 474
+I+ LC G + A+G + +KK +P+NL+Y LI A+ K K + +A LL++M G
Sbjct: 351 LINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERG 410
Query: 475 WIPELQTYNLVDNLLREHDRSDLCLKLERKL-----------ENHQLQKLCKLGQLDAAY 523
P++ TY ++ + L D + ++ KL N + LCK G+ A
Sbjct: 411 CKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAK 470
Query: 524 EKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLL 561
ML++ I AY T F ++G AR++
Sbjct: 471 LLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVF 508
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 135/321 (42%), Gaps = 32/321 (9%)
Query: 172 SICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIF 231
+I I L + G+ A+ +E G P+NL + ++ CK + + +L L++
Sbjct: 349 NILINRLCKEGKKEVAVGFLDEASKK-GLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407
Query: 232 HKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKK 291
+ PD + G I G G + A+ + ++ GV P + NML+ LC
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK----- 462
Query: 292 GSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCR 351
+G PA +F + + +LP +V L+ R
Sbjct: 463 -------------------------TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIR 497
Query: 352 LGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGV 411
G +EA K+ + E+ + + ++K C ++EA RM L P
Sbjct: 498 SGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFT 557
Query: 412 YNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEML 471
Y+++I ++ A+ +F M K +C P+ +TYT+LI+ ++K+A + EM
Sbjct: 558 YSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQ 617
Query: 472 GLGWIPELQTY-NLVDNLLRE 491
+P + TY L+ +L +E
Sbjct: 618 LRDLVPNVVTYTTLIRSLAKE 638
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 112/277 (40%), Gaps = 20/277 (7%)
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAA 258
GCKPD + + +++ L ++ + + +++ + SPD + G C+ GR A
Sbjct: 410 GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPA 469
Query: 259 LEIFSQMNKIGVLPTRSAVNMLIG------------ELCSLSEKKGSVEKVRVRNTRRPC 306
+FS+M +LP LI ++ SLS +KG V+V
Sbjct: 470 KLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKG----VKVDVVHHNA 525
Query: 307 TILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVE 366
I SG + A+ + L+P F ++ + A+K+ R +E
Sbjct: 526 MI---KGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 367 ERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVI-SMLCTLGNL 425
+ K Y ++ C + A F M L P + Y ++I S+ L
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTL 642
Query: 426 DHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKV 462
+ A+ +ELM +C+P+ +T+ L+ K + KV
Sbjct: 643 EKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKV 679
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 125/321 (38%), Gaps = 26/321 (8%)
Query: 166 VSPKA--MSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEET 223
VSP A ++ + L + GR A LF EM PD V+ ++ + +E
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDR-NILPDAYVYATLIDGFIRSGDFDEA 504
Query: 224 IELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGE 283
++ K D I GFCR G L AL ++MN+ ++P + + +I
Sbjct: 505 RKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDG 564
Query: 284 LCSLSEKKGSVEKVRV--RNTRRPCTILVPNMGGN---SGAIQPAVEVFWAVFNSGLLPS 338
+ +++ R +N +P + ++ G + A E F + L+P+
Sbjct: 565 YVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPN 624
Query: 339 TFVVVKLMSELCRLGQT-EEAVKLLRIV-------EERKLTCVEEGYA-------IVMKA 383
L+ L + T E+AV ++ E C+ +G+ +
Sbjct: 625 VVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPD 684
Query: 384 LCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPD 443
+H Q S F RM + G YNS + LC G + A + M KK PD
Sbjct: 685 GSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPD 744
Query: 444 NLTYTALIHAH---GKVKNWK 461
+++ A++H G K W+
Sbjct: 745 PVSFAAILHGFCVVGNSKQWR 765
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 188/411 (45%), Gaps = 17/411 (4%)
Query: 82 DTAIDHVLDRYKGDLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMAD 141
D ++ VLD K DLS + ++ VL ++H R FF WA + GF D M
Sbjct: 145 DRNMEAVLDEMKLDLSHDLIVEVLERFRH-ARKPAFRFFCWAAERQGFAHDSRTYNSMMS 203
Query: 142 FLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCK 201
L + + F+ M +L + + KG ++ + +I ++ +A+ +FE M+ + K
Sbjct: 204 ILAKTRQFETMVSVLEEMGT-KGLLTMETFTIAMKAFAAAKERKKAVGIFELMKK-YKFK 261
Query: 202 PDNLVFNNVLYVLCKKQSSEETIELALRIFHKME---SPDTYSCGNTIVGFCRLGRLGAA 258
N +L L + + +E A +F K++ +P+ + + G+CR+ L A
Sbjct: 262 IGVETINCLLDSLGRAKLGKE----AQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEA 317
Query: 259 LEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPC------TILVPN 312
I++ M G+ P A N+++ L +K +++ V ++ PC TI++ +
Sbjct: 318 ARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 377
Query: 313 MGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTC 372
S +++ A+E F + +SGL P V L++ + + +LL+ ++E+
Sbjct: 378 FCKQS-SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP 436
Query: 373 VEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVF 432
+ Y ++K + + E A+ ++ +M+ ++P + +N ++ N + V+
Sbjct: 437 DGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVW 496
Query: 433 ELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN 483
E M KK PD+ +YT LI + A L EML G L YN
Sbjct: 497 EEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYN 547
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 80/188 (42%)
Query: 324 VEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKA 383
+V + P+ L++ CR+ EA ++ + ++ L + ++++
Sbjct: 283 AQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEG 342
Query: 384 LCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPD 443
L + +A LF M + G P + Y +I C +++ A+ F+ M PD
Sbjct: 343 LLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402
Query: 444 NLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLER 503
YT LI G K Y+LL EM G P+ +TYN + L+ + ++
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYN 462
Query: 504 KLENHQLQ 511
K+ ++++
Sbjct: 463 KMIQNEIE 470
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 156/391 (39%), Gaps = 58/391 (14%)
Query: 183 RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSC 242
RI +A++L ++M + G KPD F +++ L + E + L ++ + PD +
Sbjct: 168 RISDAVALVDQMVEM-GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 243 GNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNT 302
G + G C+ G + AL + +M K + N +I LC
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH------------- 273
Query: 303 RRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLL 362
+ A+ +F + N G+ P F L+S LC G+ +A +LL
Sbjct: 274 -----------------MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 363 RIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTL 422
+ ERK+ ++ ++ A ++ EA L+ M+ + P + Y+S+I+ C
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 423 GNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTY 482
LD A +FELM K C P+ +TY+ LI K K + +L EM G + TY
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 483 -NLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYAR 541
L+ + D D A K M+ G+H +
Sbjct: 437 TTLIHGFFQARD-------------------------CDNAQMVFKQMVSVGVHPNILTY 471
Query: 542 DTFEHVFQKNGKLKIARQLLETTRR-VQEPE 571
+ KNGKL A + E +R EP+
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 152/323 (47%), Gaps = 14/323 (4%)
Query: 183 RIHEALSLFEEM--ETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTY 240
++ +A+ LF +M F P + FN +L + K E I L ++ S D Y
Sbjct: 63 KVDDAVDLFGDMVKSRPF---PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLY 119
Query: 241 SCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC---SLSEKKGSVEKV 297
+ I FCR +L AL + ++M K+G P ++ L+ C +S+ V+++
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 298 RVRNTRRP----CTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLG 353
V +P T L+ + ++ A + AV + + G P +++ LC+ G
Sbjct: 180 -VEMGYKPDTFTFTTLIHGLFLHNKASE-AVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 354 QTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYN 413
+ A+ LL+ +E+ K+ Y ++ LC + +++A NLF M G++P + Y+
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 414 SVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGL 473
S+IS LC G A + M +++ P+ +T++ALI A K A L EM+
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 474 GWIPELQTYNLVDNLLREHDRSD 496
P++ TY+ + N HDR D
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLD 380
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 152/365 (41%), Gaps = 6/365 (1%)
Query: 132 DDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLF 191
D + + D L + K DD L + ++ + S I L +GR +A L
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 192 EEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCR 251
+M P+ + F+ ++ K+ E +L + + PD ++ + I GFC
Sbjct: 317 SDM-IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 252 LGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVP 311
RL A +F M P + LI C + +E R + R V
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Query: 312 NMGGNSGAIQP-----AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVE 366
G Q A VF + + G+ P+ L+ LC+ G+ +A+ + ++
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Query: 367 ERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLD 426
+ Y I+++ +C +VE+ LF + G+ P + YN++IS C G+ +
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555
Query: 427 HAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVD 486
A + + M + LP++ TY LI A + + + + +L+ EM G+ + T LV
Sbjct: 556 EADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 615
Query: 487 NLLRE 491
N+L +
Sbjct: 616 NMLHD 620
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 108/256 (42%), Gaps = 17/256 (6%)
Query: 320 IQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAI 379
+ AV++F + S PS KL+S + ++ + E + L ++ ++ Y+I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 380 VMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKR 439
+ C Q+ A + +M+ G +P + +S+++ C + A+ + + M +
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 440 CLPDNLTYTALIHA---HGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSD 496
PD T+T LIH H K A L+ +M+ G P+L TY V N L + D
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASE---AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 497 LCLKLERKLE-----------NHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFE 545
L L L +K+E N + LCK +D A M KGI + +
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 546 HVFQKNGKLKIARQLL 561
G+ A +LL
Sbjct: 301 SCLCNYGRWSDASRLL 316
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 151/351 (43%), Gaps = 41/351 (11%)
Query: 169 KAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELAL 228
K +I IR L G+ +AL L M FGC+PD + +N ++ CK + E+
Sbjct: 207 KTFNILIRGLCGVGKAEKALELLGVMSG-FGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
Query: 229 RI-FHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSL 287
+ + SPD + + I G+C+ G++ A + M ++G+ PT N+L+
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGY--- 322
Query: 288 SEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMS 347
+G + A E+ + + G P L+
Sbjct: 323 ---------------------------AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 348 ELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKP 407
CR+GQ + +L + R + Y+I++ ALC+ ++ +A L G++ + + P
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP 415
Query: 408 KLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLL 467
+ +YN VI C G ++ A + E M KK+C PD +T+T LI H A +
Sbjct: 416 QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 475
Query: 468 MEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQ 518
+M+ +G P+ T V +LL LK E + L ++ + GQ
Sbjct: 476 HKMVAIGCSPDKIT---VSSLL------SCLLKAGMAKEAYHLNQIARKGQ 517
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 116/252 (46%), Gaps = 23/252 (9%)
Query: 331 FNSGLLPSTF-------VVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVE-EGYAIVMK 382
F + LL +F VV L++ L +L + E+A+KL R +C + + + I+++
Sbjct: 156 FATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFD-EHLRFQSCNDTKTFNILIR 214
Query: 383 ALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVF-ELMNKKRCL 441
LC + E+A L G M G +P + YN++I C L+ A +F ++ + C
Sbjct: 215 GLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCS 274
Query: 442 PDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN-LVDN-------LLREHD 493
PD +TYT++I + K + A LL +ML LG P T+N LVD L E
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 494 RSDL----CLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQ 549
R + C + + C++GQ+ + + M +G+ +A+ +
Sbjct: 335 RGKMISFGCFP-DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC 393
Query: 550 KNGKLKIARQLL 561
+L AR+LL
Sbjct: 394 NENRLLKARELL 405
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 151/351 (43%), Gaps = 41/351 (11%)
Query: 169 KAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELAL 228
K +I IR L G+ +AL L M FGC+PD + +N ++ CK + E+
Sbjct: 207 KTFNILIRGLCGVGKAEKALELLGVMSG-FGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
Query: 229 RI-FHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSL 287
+ + SPD + + I G+C+ G++ A + M ++G+ PT N+L+
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGY--- 322
Query: 288 SEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMS 347
+G + A E+ + + G P L+
Sbjct: 323 ---------------------------AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 348 ELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKP 407
CR+GQ + +L + R + Y+I++ ALC+ ++ +A L G++ + + P
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP 415
Query: 408 KLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLL 467
+ +YN VI C G ++ A + E M KK+C PD +T+T LI H A +
Sbjct: 416 QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 475
Query: 468 MEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQ 518
+M+ +G P+ T V +LL LK E + L ++ + GQ
Sbjct: 476 HKMVAIGCSPDKIT---VSSLL------SCLLKAGMAKEAYHLNQIARKGQ 517
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 116/252 (46%), Gaps = 23/252 (9%)
Query: 331 FNSGLLPSTF-------VVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVE-EGYAIVMK 382
F + LL +F VV L++ L +L + E+A+KL R +C + + + I+++
Sbjct: 156 FATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFD-EHLRFQSCNDTKTFNILIR 214
Query: 383 ALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVF-ELMNKKRCL 441
LC + E+A L G M G +P + YN++I C L+ A +F ++ + C
Sbjct: 215 GLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCS 274
Query: 442 PDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN-LVDN-------LLREHD 493
PD +TYT++I + K + A LL +ML LG P T+N LVD L E
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 494 RSDL----CLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQ 549
R + C + + C++GQ+ + + M +G+ +A+ +
Sbjct: 335 RGKMISFGCFP-DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC 393
Query: 550 KNGKLKIARQLL 561
+L AR+LL
Sbjct: 394 NENRLLKARELL 405
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 182/440 (41%), Gaps = 73/440 (16%)
Query: 114 AKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKG---KVSPKA 170
A L FF W + GF + M +FLGR + + + L ++ + K+ +
Sbjct: 82 ADGLRFFDWVSNK-GFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRY 140
Query: 171 MSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRI 230
+ IR G G E++ LF+ M+ + G P L FN++L +L K+ + +A +
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQM-GISPSVLTFNSLLSILLKRGRTG----MAHDL 195
Query: 231 FHKME-----SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC 285
F +M +PD+Y+ I GFC+ + A IF M P N +I LC
Sbjct: 196 FDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLC 255
Query: 286 SLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSG---------AIQPAVEVFWAVFNSGLL 336
+ K + + + T + PN+ + I AV VF + + GL
Sbjct: 256 RAGKVK--IAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLK 313
Query: 337 PSTF---VVVKLMSEL----------------------------------CRLGQTEEAV 359
P+ ++K +SE C G + A+
Sbjct: 314 PNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAM 373
Query: 360 KLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGL-------KPKLGVY 412
K+ + + KL Y+++++ LC + + A LF + + KP Y
Sbjct: 374 KVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAY 433
Query: 413 NSVISMLCTLGNLDHAMGVF-ELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEML 471
N + LC G A VF +LM KR + D +Y LI H + +K AY+LL+ ML
Sbjct: 434 NPMFEYLCANGKTKQAEKVFRQLM--KRGVQDPPSYKTLITGHCREGKFKPAYELLVLML 491
Query: 472 GLGWIPELQTYN-LVDNLLR 490
++P+L+TY L+D LL+
Sbjct: 492 RREFVPDLETYELLIDGLLK 511
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 97/238 (40%), Gaps = 18/238 (7%)
Query: 315 GNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVE 374
GN+G Q +V++F + G+ PS L+S L + G+T A L + R
Sbjct: 149 GNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR-RTYGVTP 207
Query: 375 EGYAI--VMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVF 432
+ Y ++ C + V+EA +F M P + YN++I LC G + A V
Sbjct: 208 DSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVL 267
Query: 433 ELMNKK--RCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLR 490
M KK P+ ++YT L+ + + A + +ML G P TYN + L
Sbjct: 268 SGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLS 327
Query: 491 EHDRSD-------------LCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIH 535
E R D + N ++ C G LDAA + + ML +H
Sbjct: 328 EAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLH 385
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 163/382 (42%), Gaps = 40/382 (10%)
Query: 184 IHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIEL------ALRIFHKMESP 237
I EA+ +F +M + G KP+ + +N ++ L + +E ++ A F +P
Sbjct: 297 IDEAVLVFHDMLSR-GLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTF----AP 351
Query: 238 DTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC------------ 285
D + I C G L AA+++F +M + + P ++ ++LI LC
Sbjct: 352 DACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLF 411
Query: 286 -SLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLL-PSTFVVV 343
L EK+ + K + + + N G + A +VF + G+ P ++
Sbjct: 412 NELFEKEVLLGKDECKPLAAAYNPMFEYLCAN-GKTKQAEKVFRQLMKRGVQDPPSYKT- 469
Query: 344 KLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLAC 403
L++ CR G+ + A +LL ++ R+ E Y +++ L + A + RML
Sbjct: 470 -LITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRS 528
Query: 404 GLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTA----LIHAHGKVKN 459
P ++SV++ L + + + LM +KR + N+ + L+ + + +
Sbjct: 529 SYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKR-IRQNIDLSTQVVRLLFSSAQKEK 587
Query: 460 WKVAYDLLMEMLGLGWIPELQTYNLVDN--LLREHDRSDLCLKLERKLE----NHQLQKL 513
+ LL + L + EL Y L +N LL H CL+ + ++ N ++ L
Sbjct: 588 AFLIVRLLYDNGYLVKMEELLGY-LCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGL 646
Query: 514 CKLGQLDAAYEKAKSMLEKGIH 535
CK + A+ ++E G H
Sbjct: 647 CKHKRHSEAFSLYNELVELGNH 668
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 147/326 (45%), Gaps = 33/326 (10%)
Query: 172 SICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIF 231
S I + G++ EA L+ EM T G PD + +N+++ CK+ E ++ +
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITR-GIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 232 HKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKK 291
K PD + I +C+ R+ + +F +++ G++P N L+ C
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC------ 431
Query: 292 GSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCR 351
SG + A E+F + + G+ PS L+ LC
Sbjct: 432 ------------------------QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 352 LGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGV 411
G+ +A+++ +++ ++T Y I++ +C+ +V++A +LF + G+KP +
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 412 YNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEML 471
YN +I LC G+L A +F M + C PD+ TY LI AH + +L+ EM
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587
Query: 472 GLGWIPELQTYNLVDNLL--REHDRS 495
G+ + T +V ++L R D+S
Sbjct: 588 VCGFSADSSTIKMVIDMLSDRRLDKS 613
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 173/406 (42%), Gaps = 37/406 (9%)
Query: 183 RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKME----SPD 238
++++A+ LFE M P + FN LC + + +L L ME D
Sbjct: 50 KVNDAIDLFESMIQSRPL-PTPIDFNR----LCSAVARTKQYDLVLGFCKGMELNGIEHD 104
Query: 239 TYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC---SLSEKKGSVE 295
Y+ I +CR +L A + + K+G P + L+ C +SE V+
Sbjct: 105 MYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVD 164
Query: 296 KVRVRNTRRPCTILVPNMGGN---SGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRL 352
++ V +RP + V + G + A+ + + G P +++ LC+
Sbjct: 165 RM-VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKS 223
Query: 353 GQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVY 412
G + A+ L R +EER + Y+IV+ +LC ++A +LF M G+K + Y
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 413 NSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLG 472
+S+I LC G D + M + +PD +T++ALI K A +L EM+
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 473 LGWIPELQTYN-LVDNLLREHDRSDLCLKLERKLENHQLQK---------------LCKL 516
G P+ TYN L+D +E+ CL ++ + + K CK
Sbjct: 344 RGIAPDTITYNSLIDGFCKEN-----CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398
Query: 517 GQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLE 562
++D + + KG+ + +T F ++GKL A++L +
Sbjct: 399 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ 444
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/488 (22%), Positives = 193/488 (39%), Gaps = 75/488 (15%)
Query: 103 RVLMSYQHLGRAKTLNF----FSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMT 158
++L ++ LGRA L + +++ GF + V E +A L D M
Sbjct: 120 KLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVA-------LVDRM------ 166
Query: 159 VASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQ 218
K + +S I L GR+ EAL L + M +G +PD + + VL LCK
Sbjct: 167 -VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM-VEYGFQPDEVTYGPVLNRLCKSG 224
Query: 219 SSEETIELALRIFHKMESPDT------YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLP 272
+S LAL +F KME + YS I C+ G AL +F++M G+
Sbjct: 225 NSA----LALDLFRKMEERNIKASVVQYSI--VIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Query: 273 TRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFN 332
+ LIG LC N G ++ +
Sbjct: 279 DVVTYSSLIGGLC------------------------------NDGKWDDGAKMLREMIG 308
Query: 333 SGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEE 392
++P L+ + G+ EA +L + R + Y ++ C + E
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 393 ASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIH 452
A+ +F M++ G +P + Y+ +I+ C +D M +F ++ K +P+ +TY L+
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428
Query: 453 AHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLE------ 506
+ A +L EM+ G P + TY ++ + L ++ + L++ K++
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 488
Query: 507 -----NHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLL 561
N + +C ++D A+ S+ +KG+ + K G L A L
Sbjct: 489 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 548
Query: 562 ETTRRVQE 569
R+++E
Sbjct: 549 ---RKMKE 553
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 176/431 (40%), Gaps = 33/431 (7%)
Query: 99 NFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMT 158
+ +L+ L GRA L F W + F D V + D+ GRRK D K +L
Sbjct: 110 DLILQTLNLSPEAGRA-ALGFNEWLDSNSNFSHTDETVSFFVDYFGRRK---DFKGMLEI 165
Query: 159 VASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQ 218
++ KG K + I L R GR + FE+ME +G K D V+ LC+K
Sbjct: 166 ISKYKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKG 225
Query: 219 SSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVN 278
+ ++ +++ PD C I G+C +L A + +M++ G A N
Sbjct: 226 HASIAEKMVKNTANEI-FPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYN 284
Query: 279 MLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVE-VFWAVFNSGLLP 337
M++ +C L KK + +QP VE V + G+
Sbjct: 285 MMLDCVCKLCRKKDPFK------------------------LQPEVEKVLLEMEFRGVPR 320
Query: 338 STFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLF 397
+T L++ LC++ +TEEA+ L + E E Y +++++L ++ E +
Sbjct: 321 NTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMI 380
Query: 398 GRMLACGLKPKLGV--YNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHG 455
+M + G L Y + +LC + L+HAM VF+ M C P TY L+
Sbjct: 381 DKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMC 440
Query: 456 KVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRS-DLCLKLERKLENHQLQKLC 514
A L E G + Y + +++ + D +K L +K
Sbjct: 441 ANNQLTRANGLYKEAAKKGIAVSPKEYRVDPRFMKKKTKEVDSNVKKRETLPEKTARKKK 500
Query: 515 KLGQLDAAYEK 525
+L Q++ ++ K
Sbjct: 501 RLKQINMSFVK 511
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 186/444 (41%), Gaps = 57/444 (12%)
Query: 163 KGKVSPKAMS--ICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSS 220
+ +VSP + I IR G I AL+LF++MET GC P+ + +N ++ CK +
Sbjct: 198 ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETK-GCLPNVVTYNTLIDGYCKLRKI 256
Query: 221 EETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIG----------- 269
++ +L + K P+ S I G CR GR+ + ++MN+ G
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 270 ------------------------VLPTRSAVNMLIGELCSLSEKKGSVE---KVRVRN- 301
+ P+ LI +C ++E ++RVR
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 302 --TRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAV 359
R T LV G + A V + ++G PS L++ C G+ E+A+
Sbjct: 377 CPNERTYTTLVDGFS-QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 360 KLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISML 419
+L ++E+ L+ Y+ V+ C V+EA + M+ G+KP Y+S+I
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 420 CTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPEL 479
C A ++E M + PD TYTALI+A+ + + A L EM+ G +P++
Sbjct: 496 CEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDV 555
Query: 480 QTYNLVDNLLREHDRS----DLCLKL------ERKLENHQLQKLCKLGQLDAAYEKAKSM 529
TY+++ N L + R+ L LKL + H L + C + + K
Sbjct: 556 VTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGF 615
Query: 530 LEKGIHLSAYARDTFEHVFQKNGK 553
KG + A FE + KN K
Sbjct: 616 CMKG--MMTEADQVFESMLGKNHK 637
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 114/520 (21%), Positives = 195/520 (37%), Gaps = 71/520 (13%)
Query: 85 IDHVLDRYKGDLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVV-------- 136
+ H+ + + +SN +L+ +A L F +WA F +
Sbjct: 39 LHHLSANFTPEAASNLLLK-----SQNDQALILKFLNWANPHQFFTLRCKCITLHILTKF 93
Query: 137 ------EYMADFLGRRKLFDDMKCLLMTVASQKGKV---SPKAMSICIRFLGRHGRIHEA 187
+ +A+ + + L D+ L+ + + + + ++ R I +A
Sbjct: 94 KLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKA 153
Query: 188 LSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM----ESPDTYSCG 243
LS+ + G P L +N VL + S+ I A +F +M SP+ ++
Sbjct: 154 LSIVH-LAQAHGFMPGVLSYNAVLDATIR---SKRNISFAENVFKEMLESQVSPNVFTYN 209
Query: 244 NTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTR 303
I GFC G + AL +F +M G LP N LI C L +
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK-------------- 255
Query: 304 RPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLR 363
I ++ ++ GL P+ +++ LCR G+ +E +L
Sbjct: 256 ----------------IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLT 299
Query: 364 IVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLG 423
+ R + E Y ++K C +A + ML GL P + Y S+I +C G
Sbjct: 300 EMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG 359
Query: 424 NLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN 483
N++ AM + M + P+ TYT L+ + AY +L EM G+ P + TYN
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 484 -----------LVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEK 532
+ D + D + L + + L C+ +D A + M+EK
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Query: 533 GIHLSAYARDTFEHVFQKNGKLKIARQLLETTRRVQEPEE 572
GI + F + + K A L E RV P +
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 122/298 (40%), Gaps = 57/298 (19%)
Query: 182 GRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYS 241
G++ +A+++ E+M+ G PD + ++ VL C+ +E + + + K PDT +
Sbjct: 429 GKMEDAIAVLEDMKEK-GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 242 CGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRN 301
+ I GFC R A +++ +M ++G+ P LI C
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM--------------- 532
Query: 302 TRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKL 361
G ++ A+++ + G+LP L++ L + +T EA +L
Sbjct: 533 ---------------EGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 362 LRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISML-- 419
L KL E V + H +E SN+ + SV+S++
Sbjct: 578 LL-----KLFYEES----VPSDVTYHTLIENCSNI--------------EFKSVVSLIKG 614
Query: 420 -CTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWI 476
C G + A VFE M K PD Y +IH H + + + AY L EM+ G++
Sbjct: 615 FCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 672
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 140/324 (43%), Gaps = 35/324 (10%)
Query: 181 HG-RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDT 239
HG RI +A+SL +M + G +PD+ FN +++ L + + E + L R+ K PD
Sbjct: 163 HGNRISDAVSLVGQMVEM-GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDL 221
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRV 299
+ G + G C+ G + AL + +M + + P N +I LC
Sbjct: 222 VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC-------------- 267
Query: 300 RNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAV 359
N + A+ +F + N G+ P+ L+ LC G+ +A
Sbjct: 268 ----------------NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 360 KLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISML 419
+LL + ERK+ ++ ++ A ++ EA L+ M+ + P + Y+S+I+
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 420 CTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPEL 479
C LD A +FELM K C P+ +TY LI K K +L EM G +
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 480 QTY-NLVDNLL--REHDRSDLCLK 500
TY L+ RE D + + K
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFK 455
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 154/372 (41%), Gaps = 43/372 (11%)
Query: 162 QKGKVSPKAM--SICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLC---- 215
++GK+ P + + I L + +++AL+LF EM+ G +P+ + +N+++ LC
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGR 306
Query: 216 -------------------------------KKQSSEETIELALRIFHKMESPDTYSCGN 244
K+ E +L + + PD ++ +
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366
Query: 245 TIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRR 304
I GFC RL A +F M P N LI C +E R + R
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 305 PCTILVPNMGGNSGAIQP-----AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAV 359
V G Q A VF + + G+LP L+ LC G+ E A+
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Query: 360 KLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISML 419
+ ++ K+ Y I+++ +C +VE+ +LF + G+KP + Y +++S
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 546
Query: 420 CTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPEL 479
C G + A +F M ++ LPD+ TY LI AH + + + +L+ EM ++ +
Sbjct: 547 CRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 606
Query: 480 QTYNLVDNLLRE 491
T LV N+L +
Sbjct: 607 STIGLVTNMLHD 618
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 172/385 (44%), Gaps = 23/385 (5%)
Query: 183 RIHEALSLFEEM--ETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTY 240
++ +A++LF +M F P + F+ +L + K + I L ++ + S + Y
Sbjct: 61 KLDDAVNLFGDMVKSRPF---PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 117
Query: 241 SCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKV--R 298
+ I FCR +L AL + ++M K+G P +N L+ C + +V V
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 299 VRNTRRPCTI----LVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQ 354
V +P + L+ + ++ A + AV + + G P +++ LC+ G
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASE-AVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 355 TEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNS 414
+ A+ LL+ +E+ K+ Y ++ ALC++ V +A NLF M G++P + YNS
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 415 VISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLG 474
+I LC G A + M +++ P+ +T++ALI A K A L EM+
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 475 WIPELQTYNLVDNLLREHDRSDLCLKLERKL-----------ENHQLQKLCKLGQLDAAY 523
P++ TY+ + N HDR D + + N ++ CK ++D
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 524 EKAKSMLEKGIHLSAYARDTFEHVF 548
E + M ++G+ + T H F
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGF 441
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 102/250 (40%), Gaps = 25/250 (10%)
Query: 323 AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMK 382
A+ V + G P + L++ C + +AV L+ + E + ++
Sbjct: 135 ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIH 194
Query: 383 ALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLP 442
L H + EA L RM+ G +P L Y V++ LC G++D A+ + + M + + P
Sbjct: 195 GLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEP 254
Query: 443 DNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLE 502
+ Y +I A KN A +L EM G P + TYN +L+R CL
Sbjct: 255 GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN---SLIR-------CL--- 301
Query: 503 RKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLL- 561
C G+ A M+E+ I+ + F K GKL A +L
Sbjct: 302 -----------CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 562 ETTRRVQEPE 571
E +R +P+
Sbjct: 351 EMIKRSIDPD 360
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 107/257 (41%), Gaps = 11/257 (4%)
Query: 316 NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEE 375
N + AV +F + S PS KL+S + ++ + + + L ++ ++
Sbjct: 58 NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 117
Query: 376 GYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELM 435
Y+I++ C Q+ A + +M+ G +P + NS+++ C + A+ + M
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 436 NKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRS 495
+ PD+ T+ LIH + A L+ M+ G P+L TY +V N L +
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 496 DLCLKLERKLE-----------NHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTF 544
DL L L +K+E N + LC ++ A M KGI + ++
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 545 EHVFQKNGKLKIARQLL 561
G+ A +LL
Sbjct: 298 IRCLCNYGRWSDASRLL 314
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 176/430 (40%), Gaps = 79/430 (18%)
Query: 115 KTLNFFSWAGTQMGFQFDDS-VVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSI 173
++L FF+WA ++ + M D G+ + FD L+ + S+ ++S + +I
Sbjct: 132 QSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTI 191
Query: 174 CIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHK 233
IR R G EA+ F ME +GC PD + F+ V+ L +K+ + E + +
Sbjct: 192 LIRRYVRAGLASEAVHCFNRMED-YGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR 250
Query: 234 MESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGS 293
E PD N + G+CR G + A ++F +M G+ P +++I LC
Sbjct: 251 FE-PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALC-------- 301
Query: 294 VEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLG 353
G I A +VF + +SG P+ LM + G
Sbjct: 302 ----------------------RCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAG 339
Query: 354 QTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYN 413
+TE+ ++ ++ +M G +P YN
Sbjct: 340 RTEKVLQ-----------------------------------VYNQMKKLGCEPDTITYN 364
Query: 414 SVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGL 473
+I C NL++A+ V M KK+C + T+ + K ++ A+ + +M+
Sbjct: 365 FLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEA 424
Query: 474 GWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQK-----------LCKLGQLDAA 522
P TYN++ + +D+ LK+++++++ +++ C +G + A
Sbjct: 425 KCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNA 484
Query: 523 YEKAKSMLEK 532
Y+ K M+E+
Sbjct: 485 YKLFKEMVEE 494
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 187/411 (45%), Gaps = 17/411 (4%)
Query: 82 DTAIDHVLDRYKGDLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMAD 141
D ++ VLD K DLS + ++ VL ++H R FF WA + GF D M
Sbjct: 144 DRNMEAVLDEMKLDLSHDLIVEVLERFRH-ARKPAFRFFCWAAERQGFAHDSRTYNSMMS 202
Query: 142 FLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCK 201
L + + F+ M +L + + KG ++ + +I ++ +A+ +FE M+ + K
Sbjct: 203 ILAKTRQFETMVSVLEEMGT-KGLLTMETFTIAMKAFAAAKERKKAVGIFELMKK-YKFK 260
Query: 202 PDNLVFNNVLYVLCKKQSSEETIELALRIFHKME---SPDTYSCGNTIVGFCRLGRLGAA 258
N +L L + + +E A +F K++ +P+ + + G+CR+ L A
Sbjct: 261 IGVETINCLLDSLGRAKLGKE----AQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEA 316
Query: 259 LEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPC------TILVPN 312
I++ M G+ P A N+++ L +K +++ V ++ PC TI++ +
Sbjct: 317 ARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 376
Query: 313 MGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTC 372
S +++ A+E F + +SGL P V L++ + + +LL+ ++E+
Sbjct: 377 FCKQS-SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP 435
Query: 373 VEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVF 432
+ Y ++K + + E + ++ +M+ ++P + +N ++ N + V+
Sbjct: 436 DGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVW 495
Query: 433 ELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN 483
+ M KK PD+ +YT LI + A L EML G L YN
Sbjct: 496 DEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 546
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 113/267 (42%), Gaps = 16/267 (5%)
Query: 319 AIQPAVEVF-WAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGY 377
A +PA F WA G + +MS L + Q E V +L + + L +E +
Sbjct: 173 ARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMET-F 231
Query: 378 AIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNK 437
I MKA + ++A +F M K + N ++ L A +F+ + K
Sbjct: 232 TIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-K 290
Query: 438 KRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN-LVDNLLREHDRSD 496
+R P+ +TYT L++ +V+N A + +M+ G P++ +N +++ LLR +SD
Sbjct: 291 ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSD 350
Query: 497 LCLKLERKLENH-----------QLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFE 545
+KL +++ ++ CK ++ A E M++ G+ A
Sbjct: 351 -AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 409
Query: 546 HVFQKNGKLKIARQLLETTRRVQEPEE 572
F KL +LL+ + P +
Sbjct: 410 TGFGTQKKLDTVYELLKEMQEKGHPPD 436
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 70/166 (42%)
Query: 324 VEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKA 383
+V + P+ L++ CR+ EA ++ + + L + ++++
Sbjct: 282 AQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEG 341
Query: 384 LCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPD 443
L + +A LF M + G P + Y +I C +++ A+ F+ M PD
Sbjct: 342 LLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 401
Query: 444 NLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLL 489
YT LI G K Y+LL EM G P+ +TYN + L+
Sbjct: 402 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLM 447
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 177/426 (41%), Gaps = 92/426 (21%)
Query: 143 LGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKP 202
LG+R+ D + LL + + K + +ICIR LGR G+I+EA + + M+ GC P
Sbjct: 233 LGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDE-GCGP 291
Query: 203 DNLVFNNVLYVLCKKQSSEETIELALRIFHKMES-------------------------- 236
D + + ++ LC + ++ A +F KM++
Sbjct: 292 DVVTYTVLIDALC----TARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSV 347
Query: 237 -------------PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGE 283
PD + + C+ G G A + M G+LP N LI
Sbjct: 348 KQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICG 407
Query: 284 LCSLS------EKKGSVEKVRVRNTRRPCTILVPNMG--GNS------------------ 317
L + E G++E + V+ T + + G G+S
Sbjct: 408 LLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPN 467
Query: 318 --------------GAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLR 363
G + A ++F+ + + GL+P + +M ++G+ +EA+KLL
Sbjct: 468 IVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLS 527
Query: 364 IVEERKLTCVEEGYAIVMKALCDHC----QVEEASNLFGRMLACGLKPKLGVYNSVISML 419
+ E E IV+ +L + +V+EA +F RM LKP + YN++++ L
Sbjct: 528 EMMENGC----EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 583
Query: 420 CTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPEL 479
G + A+ +FE M +K C P+ +T+ L K +A +L +M+ +G +P++
Sbjct: 584 GKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDV 643
Query: 480 QTYNLV 485
TYN +
Sbjct: 644 FTYNTI 649
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 186/461 (40%), Gaps = 57/461 (12%)
Query: 128 GFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEA 187
G + D VV + + L + D+ + M + K K + + + LG++G+I EA
Sbjct: 533 GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 592
Query: 188 LSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES----PDTYSCG 243
+ LFE M GC P+ + FN + LCK + + LAL++ KM PD ++
Sbjct: 593 IELFEGMVQK-GCPPNTITFNTLFDCLCKN----DEVTLALKMLFKMMDMGCVPDVFTYN 647
Query: 244 NTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTR 303
I G + G++ A+ F QM K+ V P LC+L G V+ + +
Sbjct: 648 TIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVT-------LCTLL--PGVVKASLIEDAY 697
Query: 304 RPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFV--VVKLMSELCRLGQTEEAVKL 361
+ T + N A QPA +FW +L + V L G + +
Sbjct: 698 KIITNFLYNC-----ADQPA-NLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSI 751
Query: 362 LRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLA-CGLKPKLGVYNSVISMLC 420
L +++ C H V A LF + G++PKL YN +I L
Sbjct: 752 L---------------VPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLL 796
Query: 421 TLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQ 480
++ A VF + C+PD TY L+ A+GK ++L EM
Sbjct: 797 EADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTI 856
Query: 481 TYNLVDNLLREHDRSDLCLKLERKLENHQ------------LQKLCKLGQLDAAYEKAKS 528
T+N+V + L + D L L L + + + L K G+L A + +
Sbjct: 857 THNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEG 916
Query: 529 MLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTRRVQE 569
ML+ G + + + F K G+ A L + R V+E
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFK--RMVKE 955
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 129/311 (41%), Gaps = 33/311 (10%)
Query: 179 GRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKME-SP 237
G+ G+I E L++EM T C+ + + N V+ L K + ++ ++L + + SP
Sbjct: 831 GKSGKIDELFELYKEMST-HECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSP 889
Query: 238 DTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKV 297
+ G I G + GRL A ++F M G P + N+LI
Sbjct: 890 TACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILI---------------- 933
Query: 298 RVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEE 357
N G +G A +F + G+ P L+ LC +G+ +E
Sbjct: 934 --------------NGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDE 979
Query: 358 AVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLAC-GLKPKLGVYNSVI 416
+ + ++E L Y +++ L ++EEA LF M G+ P L YNS+I
Sbjct: 980 GLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039
Query: 417 SMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWI 476
L G ++ A ++ + + P+ T+ ALI + + AY + M+ G+
Sbjct: 1040 LNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFS 1099
Query: 477 PELQTYNLVDN 487
P TY + N
Sbjct: 1100 PNTGTYEQLPN 1110
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 41/287 (14%)
Query: 180 RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES--- 236
R R+ +AL LF ME++ G KP + ++++ +S + AL F KM++
Sbjct: 410 RVHRLDDALELFGNMESL-GVKP--TAYTYIVFIDYYGKSGDSVS--ALETFEKMKTKGI 464
Query: 237 -PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVE 295
P+ +C ++ + GR A +IF + IG++P NM++
Sbjct: 465 APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMM-------------- 510
Query: 296 KVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQT 355
C V G I A+++ + +G P VV L++ L + +
Sbjct: 511 ---------KCYSKV-------GEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 554
Query: 356 EEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSV 415
+EA K+ ++E KL Y ++ L + +++EA LF M+ G P +N++
Sbjct: 555 DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Query: 416 ISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKV 462
LC + A+ + M C+PD TY +I G VKN +V
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII--FGLVKNGQV 659
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 168/432 (38%), Gaps = 84/432 (19%)
Query: 182 GRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYS 241
G I EA+ L EM GC+PD +V N+++ L K +E ++ +R+ P +
Sbjct: 517 GEIDEAIKLLSEMMEN-GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575
Query: 242 CGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRN 301
+ G + G++ A+E+F M + G P N L LC E
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE------------ 623
Query: 302 TRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKL 361
+ A+++ + + + G +P F ++ L + GQ +EA+
Sbjct: 624 ------------------VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCF 665
Query: 362 LRIVEER----------------KLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGL 405
+++ K + +E+ Y I+ L +C ++ +NLF L +
Sbjct: 666 FHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLY-NC-ADQPANLFWEDLIGSI 723
Query: 406 KPKLGVYNSV----------------------ISMLCTLGNLDHAMGVFELMNKKRCLPD 443
+ G+ N+V I C N+ A +FE K +
Sbjct: 724 LAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQP 783
Query: 444 NL-TYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLE 502
L TY LI + ++A D+ +++ G IP++ TYN + + + + D +L
Sbjct: 784 KLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELY 843
Query: 503 RKLENHQ-----------LQKLCKLGQLDAAYEKAKSML-EKGIHLSAYARDTFEHVFQK 550
+++ H+ + L K G +D A + ++ ++ +A K
Sbjct: 844 KEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSK 903
Query: 551 NGKLKIARQLLE 562
+G+L A+QL E
Sbjct: 904 SGRLYEAKQLFE 915
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 132/321 (41%), Gaps = 41/321 (12%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
IR+ +H + A +LFE+ G +P +N +L + IE+A +F ++
Sbjct: 756 IRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYN----LLIGGLLEADMIEIAQDVFLQV 811
Query: 235 ES----PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEK 290
+S PD + + + + G++ E++ +M+ N++I L
Sbjct: 812 KSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVK---- 867
Query: 291 KGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNS-GLLPSTFVVVKLMSEL 349
+G + A+++++ + + P+ L+ L
Sbjct: 868 --------------------------AGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGL 901
Query: 350 CRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKL 409
+ G+ EA +L + + Y I++ + + A LF RM+ G++P L
Sbjct: 902 SKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDL 961
Query: 410 GVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLME 469
Y+ ++ LC +G +D + F+ + + PD + Y +I+ GK + A L E
Sbjct: 962 KTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE 1021
Query: 470 M-LGLGWIPELQTYN-LVDNL 488
M G P+L TYN L+ NL
Sbjct: 1022 MKTSRGITPDLYTYNSLILNL 1042
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 112/286 (39%), Gaps = 48/286 (16%)
Query: 323 AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMK 382
A+EV+ + G PS LM L + + + LL+ +E L + I ++
Sbjct: 207 AMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIR 266
Query: 383 ALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLP 442
L ++ EA + RM G P + Y +I LCT LD A VFE M R P
Sbjct: 267 VLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKP 326
Query: 443 DNLTY-----------------------------------TALIHAHGKVKNWKVAYDLL 467
D +TY T L+ A K N+ A+D L
Sbjct: 327 DRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTL 386
Query: 468 MEMLGLGWIPELQTYN-LVDNLLREHDRSDLCLKLERKLENHQLQKLC-----------K 515
M G +P L TYN L+ LLR H R D L+L +E+ ++ K
Sbjct: 387 DVMRDQGILPNLHTYNTLICGLLRVH-RLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 516 LGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLL 561
G +A E + M KGI + A + + K G+ + A+Q+
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF 491
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 14/329 (4%)
Query: 170 AMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALR 229
++I + L + G++ + + +++ G PD + +N ++ K EE EL
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQEK-GVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 230 IFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSE 289
+ K SP Y+ I G C+ G+ A E+F++M + G+ P + L+ E C
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEAC---- 351
Query: 290 KKGSV---EKV----RVRNTRRP--CTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTF 340
KKG V EKV R R+ C + ++ SG + A+ F +V +GL+P
Sbjct: 352 KKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 411
Query: 341 VVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRM 400
+ L+ CR G A+ L + ++ Y ++ LC + EA LF M
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 401 LACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNW 460
L P +I C LGNL +AM +F+ M +KR D +TY L+ GKV +
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 461 KVAYDLLMEMLGLGWIPELQTYNLVDNLL 489
A ++ +M+ +P +Y+++ N L
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNAL 560
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 184/428 (42%), Gaps = 42/428 (9%)
Query: 170 AMSICIRFLGRHGRIHEA---------------LSLFEEMETVF-GCKPDNLVFNNVLYV 213
++S I L R GR+ +A L + +++ F C ++ VF+ ++
Sbjct: 115 SLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRT 174
Query: 214 LCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPT 273
+ + E E + K + +C I R+G + A ++ ++++ GV
Sbjct: 175 YVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGIN 234
Query: 274 RSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNM---------GGNSGAIQPAV 324
+N+++ LC K G +EKV ++ + P++ + G ++ A
Sbjct: 235 VYTLNIMVNALC----KDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290
Query: 325 EVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKAL 384
E+ A+ G P + +++ LC+ G+ E A ++ + L+ Y ++
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 385 CDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDN 444
C V E +F M + + P L ++S++S+ GNLD A+ F + + +PDN
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 445 LTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLV------DNLLREHDRSDLC 498
+ YT LI + + VA +L EML G ++ TYN + +L E D+
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL-FN 469
Query: 499 LKLERKL--ENHQLQKL----CKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNG 552
ER L +++ L L CKLG L A E + M EK I L +T F K G
Sbjct: 470 EMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVG 529
Query: 553 KLKIARQL 560
+ A+++
Sbjct: 530 DIDTAKEI 537
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 177/409 (43%), Gaps = 40/409 (9%)
Query: 156 LMTVASQKGKVSPKAMS--ICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYV 213
LM KG SP + I L +HG+ A +F EM G PD+ + ++L
Sbjct: 292 LMNAMPGKG-FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS-GLSPDSTTYRSLLME 349
Query: 214 LCKKQSSEETIELALRIFHKMES----PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIG 269
CKK ET ++F M S PD + + F R G L AL F+ + + G
Sbjct: 350 ACKKGDVVET----EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 270 VLPTRSAVNMLIGELCSLSEKKGSVE-KVRVRNT--RRPCTILVPNMGG------NSGAI 320
++P +LI C +KG + + +RN ++ C + V +
Sbjct: 406 LIPDNVIYTILIQGYC----RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 321 QPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIV 380
A ++F + L P ++ + L+ C+LG + A++L + ++E+++ Y +
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 381 MKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRC 440
+ ++ A ++ M++ + P Y+ +++ LC+ G+L A V++ M K
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Query: 441 LPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN-LVDNLLREHDRSDLCL 499
P + ++I + + N L +M+ G++P+ +YN L+ +RE + S
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSK-AF 640
Query: 500 KLERKLENHQ-------------LQKLCKLGQLDAAYEKAKSMLEKGIH 535
L +K+E Q L C+ Q+ A + M+E+G++
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVN 689
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 153/366 (41%), Gaps = 25/366 (6%)
Query: 140 ADFLGRRKLFDDMKCLLMTVASQKGKVSPK--AMSICIRFLGRHGRIHEALSLFEEMETV 197
D + K+F DM+ V P S + R G + +AL F ++
Sbjct: 354 GDVVETEKVFSDMR---------SRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 198 FGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGA 257
G PDN+++ ++ C+K + L + + + D + + G C+ LG
Sbjct: 405 -GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 258 ALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKV-RVRNTRRPCTILVPNM--- 313
A ++F++M + + P + +LI C L + ++E +++ R ++ N
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523
Query: 314 -GGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTC 372
G G I A E++ + + +LP+ L++ LC G EA R+ +E
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA---FRVWDEMISKN 580
Query: 373 VEEGYAI---VMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAM 429
++ I ++K C + + +M++ G P YN++I N+ A
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640
Query: 430 GVFELMNKKR--CLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDN 487
G+ + M +++ +PD TY +++H + K A +L +M+ G P+ TY + N
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700
Query: 488 LLREHD 493
D
Sbjct: 701 GFVSQD 706
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 136/317 (42%), Gaps = 14/317 (4%)
Query: 172 SICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIF 231
+I I+ R G I A++L EM GC D + +N +L+ LCK++ E +L +
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQ-GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 232 HKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNML------IGELC 285
+ PD+Y+ I G C+LG L A+E+F +M + + N L +G++
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 286 SLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKL 345
+ E + + T +ILV N + G + A V+ + + + P+ + +
Sbjct: 533 TAKEIWADMVSKEILPTPISYSILV-NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 346 MSELCRLGQTEEAVKLLR--IVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRML-- 401
+ CR G + L I E C+ Y ++ + +A L +M
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFVPDCIS--YNTLIYGFVREENMSKAFGLVKKMEEE 649
Query: 402 ACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWK 461
GL P + YNS++ C + A V M ++ PD TYT +I+ N
Sbjct: 650 QGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLT 709
Query: 462 VAYDLLMEMLGLGWIPE 478
A+ + EML G+ P+
Sbjct: 710 EAFRIHDEMLQRGFSPD 726
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 195/439 (44%), Gaps = 16/439 (3%)
Query: 84 AIDHVLDRYKGDLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFL 143
+D LD+ +S V VL +++ G T FF W+ Q ++ M +
Sbjct: 86 VLDSALDQSGLRVSQEVVEDVLNRFRNAGLL-TYRFFQWSEKQRHYEHSVRAYHMMIEST 144
Query: 144 GRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPD 203
+ + + M L+ +K ++ + I +R R ++ EA+ F ME + P+
Sbjct: 145 AKIRQYKLM-WDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEK-YDLPPN 202
Query: 204 NLVFNNVLYVLCKKQSSEETIELALRIFHKME---SPDTYSCGNTIVGFCRLGRLGAALE 260
+ FN +L LCK ++ + A +F M +PD+ + + G+ + L A E
Sbjct: 203 LVAFNGLLSALCKSKN----VRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKARE 258
Query: 261 IFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTR--RPCTIL---VPNMGG 315
+F +M G P ++++ LC ++ VR + +P T + + + G
Sbjct: 259 VFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYG 318
Query: 316 NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEE 375
++ AV+ F + SG+ V L+ C+ + + ++L+ ++ + +T +
Sbjct: 319 TENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSK 378
Query: 376 GYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELM 435
I+++ L + + +EA ++F +M+ +P Y VI M C ++ A V++ M
Sbjct: 379 SCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYM 437
Query: 436 NKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRS 495
KK P T++ LI+ + + + A LL EM+ +G P T+ + LL + +R
Sbjct: 438 RKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEERE 497
Query: 496 DLCLKLERKLENHQLQKLC 514
D+ L K+ + LC
Sbjct: 498 DVLKFLNEKMNVLVNEPLC 516
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 170/367 (46%), Gaps = 13/367 (3%)
Query: 139 MADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVF 198
+ D L + + D+ LL + S+ SP ++ I L + G + L + M +
Sbjct: 228 LMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM-FLK 286
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAA 258
GC P+ + +N +++ LC K ++ + L R+ P+ + G I G + R A
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 259 LEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPC-------TILVP 311
+ + S M + G + ++LI L + + ++ R + + C ++LV
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWR-KMAEKGCKPNIVVYSVLVD 405
Query: 312 NMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLT 371
+ G A E+ + SG LP+ + LM + G EEAV++ + +++ +
Sbjct: 406 GLC-REGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS 464
Query: 372 CVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGV 431
+ Y++++ LC +V+EA ++ +ML G+KP Y+S+I LC +G++D A+ +
Sbjct: 465 RNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524
Query: 432 FELM---NKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNL 488
+ M + + PD +TY L+ K+ A DLL ML G P++ T N N
Sbjct: 525 YHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNT 584
Query: 489 LREHDRS 495
L E S
Sbjct: 585 LSEKSNS 591
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 120/541 (22%), Positives = 204/541 (37%), Gaps = 102/541 (18%)
Query: 120 FSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLG 179
F A F+ DS + M + FD ++ LL + + + ++ + R G
Sbjct: 64 FKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYG 123
Query: 180 RHGRIHEALSLFEEMETVFGCK-------------------------------------- 201
+ +A+ LF M F CK
Sbjct: 124 KAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNI 183
Query: 202 -PDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALE 260
P+ L FN V+ LCK + + IE+ + + PD Y+ + G C+ R+ A+
Sbjct: 184 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 243
Query: 261 IFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPN-MGGNS-- 317
+ +M G P+ N+LI LC KKG + +V VPN + N+
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLC----KKGDLTRVTKLVDNMFLKGCVPNEVTYNTLI 299
Query: 318 ------GAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLT 371
G + AV + + +S +P+ L++ L + + +AV+LL +EER
Sbjct: 300 HGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYH 359
Query: 372 CVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGV 431
+ Y++++ L + EEA +L+ +M G KP + VY+ ++ LC G + A +
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEI 419
Query: 432 FELMNKKRCLPDNLTYTALIHAHGK-------VKNW-----------KVAYDLLME---- 469
M CLP+ TY++L+ K V+ W K Y +L++
Sbjct: 420 LNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCG 479
Query: 470 -------------MLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKL----------- 505
ML +G P+ Y+ + L D LKL ++
Sbjct: 480 VGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPD 539
Query: 506 ---ENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVF-QKNGKLKIARQLL 561
N L LC + A + SML++G +TF + +K+ R L
Sbjct: 540 VVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFL 599
Query: 562 E 562
E
Sbjct: 600 E 600
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 165/391 (42%), Gaps = 52/391 (13%)
Query: 187 ALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM----ESPDTYSC 242
+SL ++ME V G + D FN V+ C + LAL I KM PD +
Sbjct: 104 VISLGKKME-VLGIRNDLYTFNIVINCFC----CCFQVSLALSILGKMLKLGYEPDRVTI 158
Query: 243 GNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNT 302
G+ + GFCR R+ A+ + +M +IG P A N +I LC T
Sbjct: 159 GSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC---------------KT 203
Query: 303 RRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLL 362
+R + A + F + G+ P+ L++ LC + +A +LL
Sbjct: 204 KR---------------VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 363 RIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTL 422
+ ++K+T Y+ ++ A + +V EA LF M+ + P + Y+S+I+ LC
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 423 GNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTY 482
+D A +F+LM K CL D ++Y LI+ K K + L EM G + TY
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 483 N-LVDNLLREHDRSDLCLKLERKLE-----------NHQLQKLCKLGQLDAAYEKAKSML 530
N L+ + D D + +++ N L LC G+L+ A + M
Sbjct: 369 NTLIQGFFQAGD-VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427
Query: 531 EKGIHLSAYARDTFEHVFQKNGKLKIARQLL 561
++ + L T K GK++ A L
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 134/312 (42%), Gaps = 14/312 (4%)
Query: 180 RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDT 239
R R+ +A+SL ++M + G KPD + +N ++ LCK + + + I K P+
Sbjct: 167 RRNRVSDAVSLVDKMVEI-GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNV 225
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVR- 298
+ + G C R A + S M K + P + L+ K G V + +
Sbjct: 226 VTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV----KNGKVLEAKE 281
Query: 299 -----VRNTRRPCTILVPNMGGN---SGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELC 350
VR + P + ++ I A ++F + + G L L++ C
Sbjct: 282 LFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFC 341
Query: 351 RLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLG 410
+ + E+ +KL R + +R L Y +++ V++A F +M G+ P +
Sbjct: 342 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 401
Query: 411 VYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEM 470
YN ++ LC G L+ A+ +FE M K+ D +TYT +I K + A+ L +
Sbjct: 402 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 461
Query: 471 LGLGWIPELQTY 482
G P++ TY
Sbjct: 462 SLKGLKPDIVTY 473
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 102/253 (40%), Gaps = 25/253 (9%)
Query: 320 IQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAI 379
+ A+++F + S PS +L+S + +L + + + L + +E + + I
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 380 VMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKR 439
V+ C QV A ++ G+ML G +P S+++ C + A+ + + M +
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 440 CLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCL 499
PD + Y A+I + K K A+D E+ G P + TY + N
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN------------ 233
Query: 500 KLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQ 559
LC + A M++K I + F KNGK+ A++
Sbjct: 234 ------------GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 281
Query: 560 LLETTRRVQ-EPE 571
L E R+ +P+
Sbjct: 282 LFEEMVRMSIDPD 294
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 186/411 (45%), Gaps = 17/411 (4%)
Query: 82 DTAIDHVLDRYKGDLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMAD 141
D ++ VLD K DLS + ++ VL ++H R FF WA + GF M
Sbjct: 145 DRNMEAVLDEMKLDLSHDLIVEVLERFRH-ARKPAFRFFCWAAERQGFAHASRTYNSMMS 203
Query: 142 FLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCK 201
L + + F+ M +L + + KG ++ + +I ++ +A+ +FE M+ + K
Sbjct: 204 ILAKTRQFETMVSVLEEMGT-KGLLTMETFTIAMKAFAAAKERKKAVGIFELMKK-YKFK 261
Query: 202 PDNLVFNNVLYVLCKKQSSEETIELALRIFHKME---SPDTYSCGNTIVGFCRLGRLGAA 258
N +L L + + +E A +F K++ +P+ + + G+CR+ L A
Sbjct: 262 IGVETINCLLDSLGRAKLGKE----AQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEA 317
Query: 259 LEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPC------TILVPN 312
I++ M G+ P A N+++ L +K +++ V ++ PC TI++ +
Sbjct: 318 ARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 377
Query: 313 MGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTC 372
S +++ A+E F + +SGL P V L++ + + +LL+ ++E+
Sbjct: 378 FCKQS-SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP 436
Query: 373 VEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVF 432
+ Y ++K + + E + ++ +M+ ++P + +N ++ N + V+
Sbjct: 437 DGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVW 496
Query: 433 ELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN 483
+ M KK PD+ +YT LI + A L EML G L YN
Sbjct: 497 DEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 547
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 319 AIQPAVEVF-WAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGY 377
A +PA F WA G ++ +MS L + Q E V +L + + L +E +
Sbjct: 174 ARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMET-F 232
Query: 378 AIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNK 437
I MKA + ++A +F M K + N ++ L A +F+ + K
Sbjct: 233 TIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-K 291
Query: 438 KRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN-LVDNLLREHDRSD 496
+R P+ +TYT L++ +V+N A + +M+ G P++ +N +++ LLR +SD
Sbjct: 292 ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSD 351
Query: 497 LCLKLERKLENH-----------QLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFE 545
+KL +++ ++ CK ++ A E M++ G+ A
Sbjct: 352 -AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Query: 546 HVFQKNGKLKIARQLLETTRRVQEPEE 572
F KL +LL+ + P +
Sbjct: 411 TGFGTQKKLDTVYELLKEMQEKGHPPD 437
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 79/188 (42%)
Query: 324 VEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKA 383
+V + P+ L++ CR+ EA ++ + + L + ++++
Sbjct: 283 AQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEG 342
Query: 384 LCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPD 443
L + +A LF M + G P + Y +I C +++ A+ F+ M PD
Sbjct: 343 LLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402
Query: 444 NLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLER 503
YT LI G K Y+LL EM G P+ +TYN + L+ + ++
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYN 462
Query: 504 KLENHQLQ 511
K+ ++++
Sbjct: 463 KMIQNEIE 470
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 149/367 (40%), Gaps = 21/367 (5%)
Query: 183 RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSC 242
R+ L+++M + G P FN ++ LC + EL + K P+ ++
Sbjct: 127 RVEFVSWLYKDM-VLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTF 185
Query: 243 GNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGS---VEKVRV 299
G + G+C+ G LE+ + M GVLP + N ++ C S VEK+R
Sbjct: 186 GILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMRE 245
Query: 300 RNTRRPCTILVPNMGG--NSGAIQPAVEVFWAVFNSGLL----PSTFVVVKLMSELCRLG 353
+ G + A +F + L P++ ++ C++G
Sbjct: 246 EGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVG 305
Query: 354 QTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYN 413
E+A L + E + Y I ++ L H + EA + +M G+ P + YN
Sbjct: 306 LLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYN 365
Query: 414 SVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGL 473
++ LC LG L A + LM + PD +TY L+H + V A LL EM+
Sbjct: 366 ILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRN 425
Query: 474 GWIPELQTYNLVDNLLREHDRSDLCLKLERKLE-----------NHQLQKLCKLGQLDAA 522
+P T N++ + L + R +L RK+ N + LC G+LD A
Sbjct: 426 NCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKA 485
Query: 523 YEKAKSM 529
E K M
Sbjct: 486 IEIVKGM 492
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 172/428 (40%), Gaps = 48/428 (11%)
Query: 148 LFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVF 207
L +D K L ++ S ++ +I ++ L RHG+ EA ++ ++M T G P +
Sbjct: 306 LLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQM-TDKGIGPSIYSY 364
Query: 208 NNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNK 267
N ++ LCK + + + PD + G + G+C +G++ AA + +M +
Sbjct: 365 NILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMR 424
Query: 268 IGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRR------PCTILVPNMGGNSGAIQ 321
LP N+L+ L + + E +R N + C I+V + G SG +
Sbjct: 425 NNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG-SGELD 483
Query: 322 PAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEE--GYAI 379
A+E+ + G + L LG + + ++E C+ + Y+
Sbjct: 484 KAIEIVKGMRVHG-----------SAALGNLGNSYIGLVDDSLIEN---NCLPDLITYST 529
Query: 380 VMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKR 439
++ LC + EA NLF M+ L+P YN I C G + A V + M KK
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Query: 440 CLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCL 499
C TY +LI G + L+ EM G P + TYN
Sbjct: 590 CHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTA-------------- 635
Query: 500 KLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQ 559
+Q LC+ +++ A M++K I + ++ F K +A++
Sbjct: 636 ----------IQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQE 685
Query: 560 LLETTRRV 567
+ ET +
Sbjct: 686 VFETAVSI 693
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 189/453 (41%), Gaps = 60/453 (13%)
Query: 166 VSPKA--MSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEET 223
++P+ ++ IR L + A LF+EM GCKP+ F ++ CK +++
Sbjct: 143 IAPQTYTFNLLIRALCDSSCVDAARELFDEMPEK-GCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 224 IEL--ALRIFHKMESPDTYSCGNTIVG-FCRLGRLGAALEIFSQMNKIGVLPTRSAVNML 280
+EL A+ F + + Y NTIV FCR GR + ++ +M + G++P N
Sbjct: 202 LELLNAMESFGVLPNKVIY---NTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSR 258
Query: 281 IGELCSLSEKKGSV-EKVRVRNTR---------RPCTI---LVPNMGGNSGAIQPAVEVF 327
I LC K+G V + R+ + RP +I L+ G ++ A +F
Sbjct: 259 ISALC----KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLF 314
Query: 328 WAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDH 387
++ + L S + L R G+ EA +L+ + ++ + Y I+M LC
Sbjct: 315 ESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKL 374
Query: 388 CQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTY 447
+ +A + G M G+ P Y ++ C++G +D A + + M + CLP+ T
Sbjct: 375 GMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTC 434
Query: 448 TALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLEN 507
L+H+ K+ A +LL +M G+ + T N++ + L D +++ + +
Sbjct: 435 NILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRV 494
Query: 508 HQ----------------------------------LQKLCKLGQLDAAYEKAKSMLEKG 533
H L LCK G+ A M+ +
Sbjct: 495 HGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEK 554
Query: 534 IHLSAYARDTFEHVFQKNGKLKIARQLLETTRR 566
+ + A + F H F K GK+ A ++L+ +
Sbjct: 555 LQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 377 YAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMN 436
Y +++++ +VE S L+ M+ CG+ P+ +N +I LC +D A +F+ M
Sbjct: 115 YNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMP 174
Query: 437 KKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSD 496
+K C P+ T+ L+ + K +LL M G +P YN + + R+D
Sbjct: 175 EKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRND 234
Query: 497 LCLKLERKLE-----------NHQLQKLCKLGQ-LDAAYEKAKSMLEKGIHLSAYARDTF 544
K+ K+ N ++ LCK G+ LDA+ + L++ + L T+
Sbjct: 235 DSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITY 294
Query: 545 EHV---FQKNGKLKIARQLLETTRR 566
+ F K G L+ A+ L E+ R
Sbjct: 295 NLMLKGFCKVGLLEDAKTLFESIRE 319
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 127/312 (40%), Gaps = 25/312 (8%)
Query: 200 CKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAAL 259
C PD + ++ +L LCK E L + + PD+ + I FC+ G++ +A
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAF 579
Query: 260 EIFSQMNKIGVLPTRSAVNMLI---GELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGN 316
+ M K G + N LI G + E G +++++ + + PN+
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKG-------ISPNICTY 632
Query: 317 SGAIQ---------PAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEE 367
+ AIQ A + + + P+ F L+ C++ + A ++
Sbjct: 633 NTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETA-- 690
Query: 368 RKLTCVEEG-YAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLD 426
+ +EG Y+++ L Q+ +A+ L +L G + +Y ++ LC L+
Sbjct: 691 VSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELE 750
Query: 427 HAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVA---YDLLMEMLGLGWIPELQTYN 483
A G+ M + D +I GK+ N K A D +MEM +G + N
Sbjct: 751 VASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVDPN 810
Query: 484 LVDNLLREHDRS 495
D ++H+++
Sbjct: 811 ARDIHQKKHNKN 822
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 167/398 (41%), Gaps = 37/398 (9%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
+R + R G + E E M G PD + ++ C+ + + ++ +
Sbjct: 109 LRQMVRTGELEEGFKFLENM-VYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSG 167
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV 294
PD + I G+C+ G + AL + +M+ V P N ++ LC + K ++
Sbjct: 168 AVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAM 224
Query: 295 EKVRVRNTRRPC-------TILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMS 347
E V R +R C TIL+ +SG + A+++ + + G P L++
Sbjct: 225 E-VLDRMLQRDCYPDVITYTILIEATCRDSG-VGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 348 ELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKP 407
+C+ G+ +EA+K L + + I+++++C + +A L ML G P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 408 KLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLL 467
+ +N +I+ LC G L A+ + E M + C P++L+Y L+H K K A + L
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 468 MEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAK 527
M+ G P++ TYN + L LCK G+++ A E
Sbjct: 403 ERMVSRGCYPDIVTYNTM------------------------LTALCKDGKVEDAVEILN 438
Query: 528 SMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTR 565
+ KG +T K GK A +LL+ R
Sbjct: 439 QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 157/375 (41%), Gaps = 30/375 (8%)
Query: 180 RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDT 239
+ G I+ ALS+ + M PD + +N +L LC ++ +E+ R+ + PD
Sbjct: 184 KAGEINNALSVLDRMSV----SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV 239
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRV 299
+ I CR +G A+++ +M G P N+L+ +C K+G +++
Sbjct: 240 ITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC----KEGRLDEAIK 295
Query: 300 RNTRRPCTILVPNMGG---------NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELC 350
P + PN+ ++G A ++ + G PS L++ LC
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 351 RLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLG 410
R G A+ +L + + Y ++ C +++ A RM++ G P +
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415
Query: 411 VYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEM 470
YN++++ LC G ++ A+ + ++ K C P +TY +I K A LL EM
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 471 LGLGWIPELQTY-NLVDNLLREHDRSDLCLKLERKLE-----------NHQLQKLCKLGQ 518
P+ TY +LV L RE + D +K + E N + LCK Q
Sbjct: 476 RAKDLKPDTITYSSLVGGLSRE-GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQ 534
Query: 519 LDAAYEKAKSMLEKG 533
D A + M+ +G
Sbjct: 535 TDRAIDFLVFMINRG 549
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 136/311 (43%), Gaps = 8/311 (2%)
Query: 172 SICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIF 231
++ + + + GR+ EA+ +M + GC+P+ + N +L +C + +L +
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSS-GCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 232 HKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKK 291
K SP + I CR G LG A++I +M + G P + N L+ C +
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 292 GSVEKVRVRNTRRPC--TILVPNMGGNS----GAIQPAVEVFWAVFNSGLLPSTFVVVKL 345
++E + R R C I+ N + G ++ AVE+ + + G P +
Sbjct: 397 RAIEYLE-RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 455
Query: 346 MSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGL 405
+ L + G+T +A+KLL + + L Y+ ++ L +V+EA F G+
Sbjct: 456 IDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI 515
Query: 406 KPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYD 465
+P +NS++ LC D A+ M + C P+ +YT LI K A +
Sbjct: 516 RPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALE 575
Query: 466 LLMEMLGLGWI 476
LL E+ G +
Sbjct: 576 LLNELCNKGLM 586
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 10/250 (4%)
Query: 167 SPKAMS--ICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETI 224
SP ++ I I FL R G + A+ + E+M GC+P++L +N +L+ CK++ + I
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQ-HGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 225 ELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGEL 284
E R+ + PD + + C+ G++ A+EI +Q++ G P N +I L
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 285 CSLSEKKGSV---EKVRVRNTRRPCTILVPNMGGN---SGAIQPAVEVFWAVFNSGLLPS 338
+ ++ +++R ++ + P TI ++ G G + A++ F G+ P+
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLK-PDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518
Query: 339 TFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFG 398
+M LC+ QT+ A+ L + R E Y I+++ L +EA L
Sbjct: 519 AVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLN 578
Query: 399 RMLACGLKPK 408
+ GL K
Sbjct: 579 ELCNKGLMKK 588
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 178 LGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESP 237
L R G++ EA+ F E E + G +P+ + FN+++ LCK + ++ I+ + + ++ P
Sbjct: 494 LSREGKVDEAIKFFHEFERM-GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKP 552
Query: 238 DTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSA 276
+ S I G G ALE+ +++ G++ SA
Sbjct: 553 NETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSA 591
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 167/381 (43%), Gaps = 26/381 (6%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
+ +L + G+ EA L +ME+ G P+ + +NNV+ C++++ + + I K
Sbjct: 450 LSWLCKQGKTDEATELLSKMESR-GIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV 294
P+ Y+ I G R ALE+ + M + +I LC K G
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLC----KVGQT 564
Query: 295 EKVR--VRNTRRPCTILVPNMGGNS--------GAIQPAVEVFWAVFNSGLLPSTFVVVK 344
K R + N + V M NS G + AV + + +G+ P+
Sbjct: 565 SKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTS 624
Query: 345 LMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACG 404
LM+ LC+ + ++A+++ ++ + + Y ++ C +E AS LF +L G
Sbjct: 625 LMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEG 684
Query: 405 LKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAY 464
L P +YNS+IS LGN+ A+ +++ M K D TYT LI K N +A
Sbjct: 685 LNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILAS 744
Query: 465 DLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLE-----------NHQLQKL 513
+L EM +G +P+ Y ++ N L + + +K+ +++ N +
Sbjct: 745 ELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGH 804
Query: 514 CKLGQLDAAYEKAKSMLEKGI 534
+ G LD A+ ML+KGI
Sbjct: 805 YREGNLDEAFRLHDEMLDKGI 825
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 152/361 (42%), Gaps = 11/361 (3%)
Query: 134 SVVEYMADFLG--RRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLF 191
+VV Y LG R+K D + + + + K + SI I R+ AL +
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVV 536
Query: 192 EEMETVFGCKPDNLVFNNVLYVLCK-KQSSEETIELALRIFHKMESPDTYSCGNTIVGFC 250
M T + + +V+ ++ LCK Q+S+ LA I K S + I GF
Sbjct: 537 NHM-TSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFF 595
Query: 251 RLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILV 310
+ G + +A+ + +M G+ P L+ LC + ++E +R + + +
Sbjct: 596 KEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALE-MRDEMKNKGVKLDI 654
Query: 311 PNMGG------NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRI 364
P G ++ A +F + GL PS + L+S LG A+ L +
Sbjct: 655 PAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKK 714
Query: 365 VEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGN 424
+ + L C Y ++ L + AS L+ M A GL P +Y +++ L G
Sbjct: 715 MLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ 774
Query: 425 LDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNL 484
+ +FE M K P+ L Y A+I H + N A+ L EML G +P+ T+++
Sbjct: 775 FVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDI 834
Query: 485 V 485
+
Sbjct: 835 L 835
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 173/430 (40%), Gaps = 61/430 (14%)
Query: 187 ALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTI 246
A SL EM+ C P + +V+ K+ + ++ I L + S + + + I
Sbjct: 287 ANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLI 346
Query: 247 VGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPC 306
G C+ L +AL +F +M K G P ++LI K G +EK +
Sbjct: 347 TGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLI----EWFRKNGEMEKALEFYKKMEV 402
Query: 307 TILVPNMGGNSGAIQ---------PAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEE 357
L P++ IQ A+++F F +G L + FV ++S LC+ G+T+E
Sbjct: 403 LGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-LANVFVCNTILSWLCKQGKTDE 461
Query: 358 AVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLG------- 410
A +LL +E R + Y VM C ++ A +F +L GLKP
Sbjct: 462 ATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILID 521
Query: 411 ----------------------------VYNSVISMLCTLGNLDHAMGVF-ELMNKKRCL 441
VY ++I+ LC +G A + ++ +KR
Sbjct: 522 GCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLC 581
Query: 442 PDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKL 501
++Y ++I K A EM G G P + TY + N L +++R D L++
Sbjct: 582 VSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEM 641
Query: 502 ERKLENHQLQ-----------KLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQK 550
+++N ++ CK +++A +LE+G++ S ++ F+
Sbjct: 642 RDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRN 701
Query: 551 NGKLKIARQL 560
G + A L
Sbjct: 702 LGNMVAALDL 711
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 33/280 (11%)
Query: 180 RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDT 239
+ G + A++ +EEM G P+ + + +++ LCK ++ +E+ + +K D
Sbjct: 596 KEGEMDSAVAAYEEM-CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDI 654
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRV 299
+ G I GFC+ + +A +FS++ + G+ P++ N LI +L
Sbjct: 655 PAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNL------------ 702
Query: 300 RNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAV 359
G + A++++ + GL L+ L + G A
Sbjct: 703 ------------------GNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILAS 744
Query: 360 KLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISML 419
+L ++ L E Y +++ L Q + +F M + P + +YN+VI+
Sbjct: 745 ELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGH 804
Query: 420 CTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKN 459
GNLD A + + M K LPD T+ L+ G+V N
Sbjct: 805 YREGNLDEAFRLHDEMLDKGILPDGATFDILV--SGQVGN 842
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/403 (21%), Positives = 171/403 (42%), Gaps = 30/403 (7%)
Query: 178 LGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESP 237
L + + EA L+ M G DN+ ++ +++ E +E+ R + P
Sbjct: 208 LVQRNSLTEAKELYSRM-VAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEP 266
Query: 238 DTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGV-LPTRSAVNMLIGELCSLSEKKGSVEK 296
D+ + C+ L A + +M + + +P++ +I L S+ K+G+++
Sbjct: 267 DSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVI--LASV--KQGNMDD 322
Query: 297 -VRVRNTRRPCTILVPNMGGNS--------GAIQPAVEVFWAVFNSGLLPSTFVVVKLMS 347
+R+++ I + + S + A+ +F + G P++ L+
Sbjct: 323 AIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE 382
Query: 348 ELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKP 407
+ G+ E+A++ + +E LT +++ + EEA LF GL
Sbjct: 383 WFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-A 441
Query: 408 KLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLL 467
+ V N+++S LC G D A + M + P+ ++Y ++ H + KN +A +
Sbjct: 442 NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF 501
Query: 468 MEMLGLGWIPELQTYN-LVDNLLREHDRSDLCLKLERKLENHQLQ-----------KLCK 515
+L G P TY+ L+D R HD + L++ + + ++ LCK
Sbjct: 502 SNILEKGLKPNNYTYSILIDGCFRNHDEQN-ALEVVNHMTSSNIEVNGVVYQTIINGLCK 560
Query: 516 LGQLDAAYEKAKSML-EKGIHLSAYARDTFEHVFQKNGKLKIA 557
+GQ A E +M+ EK + +S + ++ F K G++ A
Sbjct: 561 VGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSA 603
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 151/344 (43%), Gaps = 43/344 (12%)
Query: 237 PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEK 296
P+T + I G C GR+ ALE+ +M ++G P +N L+ LC LS K+
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLC-LSGKEAEAML 214
Query: 297 VRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTE 356
+ + C QP + V N +C+ GQT
Sbjct: 215 LIDKMVEYGC--------------QPNAVTYGPVLNV---------------MCKSGQTA 245
Query: 357 EAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVI 416
A++LLR +EER + Y+I++ LC H ++ A NLF M G+ + YN +I
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 417 SMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWI 476
C G D + M K++ P+ +T++ LI + K + A +L EM+ G
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 477 PELQTY-NLVDNLLREH--DRSDLCLKL--------ERKLENHQLQKLCKLGQLDAAYEK 525
P+ TY +L+D +E+ D+++ + L + N + CK ++D E
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 526 AKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLE--TTRRV 567
+ M +G+ +T F + GKL +A++L + +R+V
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 151/343 (44%), Gaps = 31/343 (9%)
Query: 149 FDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFN 208
+DD LL + +K + S+ I + G++ EA L +EM G PD + +
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM-IHRGIAPDTITYT 372
Query: 209 NVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKI 268
+++ CK+ ++ ++ + K P+ + I G+C+ R+ LE+F +M+
Sbjct: 373 SLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR 432
Query: 269 GVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFW 328
GV+ N LI C L G + A E+F
Sbjct: 433 GVVADTVTYNTLIQGFCEL------------------------------GKLNVAKELFQ 462
Query: 329 AVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHC 388
+ + + P+ L+ LC G++E+A+++ +E+ K+ Y I++ +C+
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522
Query: 389 QVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYT 448
+V++A +LF + G+KP + YN +I LC G L A +F M + PD TY
Sbjct: 523 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYN 582
Query: 449 ALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLRE 491
LI AH + + L+ E+ G+ + T +V ++L +
Sbjct: 583 ILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD 625
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 168/399 (42%), Gaps = 45/399 (11%)
Query: 182 GRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYS 241
G+ EA+ L ++M +GC+P+ + + VL V+CK + +EL ++ + D
Sbjct: 207 GKEAEAMLLIDKM-VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 242 CGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRN 301
I G C+ G L A +F++M G+ N+LIG C+ + +R
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 302 TRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKL 361
R+ I P V F + +S FV + G+ EA +L
Sbjct: 326 KRK---------------INPNVVTFSVLIDS------FV---------KEGKLREAEEL 355
Query: 362 LRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCT 421
+ + R + Y ++ C +++A+ + M++ G P + +N +I+ C
Sbjct: 356 HKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCK 415
Query: 422 LGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQT 481
+D + +F M+ + + D +TY LI ++ VA +L EM+ P + T
Sbjct: 416 ANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVT 475
Query: 482 YNLVDNLLREHDRSDLCLKLERKLENHQLQ-----------KLCKLGQLDAAYEKAKSML 530
Y ++ + L ++ S+ L++ K+E +++ +C ++D A++ S+
Sbjct: 476 YKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 535
Query: 531 EKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTRRVQE 569
KG+ + K G L A L R+++E
Sbjct: 536 LKGVKPGVKTYNIMIGGLCKKGPLSEAELLF---RKMEE 571
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 156/375 (41%), Gaps = 31/375 (8%)
Query: 198 FGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGA 257
G +P+ + F+ ++ LC + E +EL R+ PD + + G C G+
Sbjct: 152 LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAE 211
Query: 258 ALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVE---KVRVRNTRRPC---TILVP 311
A+ + +M + G P ++ +C + ++E K+ RN + +I++
Sbjct: 212 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 312 NMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLT 371
+ + G++ A +F + G+ + L+ C G+ ++ KLLR + +RK+
Sbjct: 272 GLCKH-GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 372 CVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGV 431
+++++ + ++ EA L M+ G+ P Y S+I C +LD A +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 432 FELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLRE 491
+LM K C P+ T+ LI+ + K +L +M G + + TYN +
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL------ 444
Query: 492 HDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKN 551
+Q C+LG+L+ A E + M+ + + + N
Sbjct: 445 ------------------IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 552 GKLKIARQLLETTRR 566
G+ + A ++ E +
Sbjct: 487 GESEKALEIFEKIEK 501
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 111/250 (44%), Gaps = 11/250 (4%)
Query: 323 AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMK 382
A+++F + +S LP+ +L S + + Q + + L + +E + + +I++
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 383 ALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLP 442
C ++ A + G+++ G +P ++++I+ LC G + A+ + + M + P
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 443 DNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLE 502
D +T L++ A L+ +M+ G P TY V N++ + ++ L ++L
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 503 RKLENHQLQ-----------KLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKN 551
RK+E ++ LCK G LD A+ M KGI + + F
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 552 GKLKIARQLL 561
G+ +LL
Sbjct: 312 GRWDDGAKLL 321
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 139/312 (44%), Gaps = 14/312 (4%)
Query: 180 RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDT 239
R R+++AL +F++M + G KP+ +++N ++ LCK + + ++L R+ PD
Sbjct: 163 RGDRVYDALYMFDQMVGM-GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRV 299
+ + I G C GR A + S M K + P N LI + C + E+
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI-DACVKEGRVSEAEEFYE 280
Query: 300 RNTRRPCTILVPNMGGNS---------GAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELC 350
RR L P++ S + A E+F + + G P L++ C
Sbjct: 281 EMIRRS---LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYC 337
Query: 351 RLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLG 410
+ + E +KL + +R + Y I+++ C ++ A +F RM+ CG+ P +
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNII 397
Query: 411 VYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEM 470
YN ++ LC G ++ A+ + M K D +TY +I K A+D+ +
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL 457
Query: 471 LGLGWIPELQTY 482
G +P++ TY
Sbjct: 458 NCQGLMPDIWTY 469
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 183/403 (45%), Gaps = 28/403 (6%)
Query: 187 ALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM----ESPDTYSC 242
+ L+E+M+ + P NL N+L + C + S+ + LAL KM P +
Sbjct: 100 VIYLWEQMQMLG--IPHNLCTCNIL-LNCFCRCSQ--LSLALSFLGKMIKLGHEPSIVTF 154
Query: 243 GNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKV-RVRN 301
G+ + GFCR R+ AL +F QM +G P N +I LC + +++ + R+
Sbjct: 155 GSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEK 214
Query: 302 TRRPCTILVPN--MGG--NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEE 357
++ N + G +SG A + + + P F L+ + G+ E
Sbjct: 215 DGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSE 274
Query: 358 AVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVIS 417
A + + R L Y++++ LC + +++EA +FG M++ G P + Y+ +I+
Sbjct: 275 AEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILIN 334
Query: 418 MLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIP 477
C ++H M +F M+++ + + +TYT LI + + VA ++ M+ G P
Sbjct: 335 GYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP 394
Query: 478 ELQTYNLVDNLLREHDRSDLCLKLERKLE-----------NHQLQKLCKLGQLDAAYEKA 526
+ TYN++ + L ++ + + L + ++ N ++ +CK G++ A++
Sbjct: 395 NIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIY 454
Query: 527 KSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTRRVQE 569
S+ +G+ + T K G + A L R+++E
Sbjct: 455 CSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALF---RKMKE 494
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 137/326 (42%), Gaps = 14/326 (4%)
Query: 127 MGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSI--CIRFLGRHGRI 184
MG++ + + + D L + K D+ LL + +K + P ++ I L GR
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM--EKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 185 HEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGN 244
+A + M T PD FN ++ K+ E E + + PD +
Sbjct: 238 SDATRMVSCM-TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 245 TIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV-------EKV 297
I G C RL A E+F M G P ++LI C + + + ++
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 298 RVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEE 357
VRNT TIL+ +G + A E+F + G+ P+ L+ LC G+ E+
Sbjct: 357 VVRNTVTY-TILIQGYC-RAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEK 414
Query: 358 AVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVIS 417
A+ +L +++ + Y I+++ +C +V +A +++ + GL P + Y +++
Sbjct: 415 ALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMML 474
Query: 418 MLCTLGNLDHAMGVFELMNKKRCLPD 443
L G A +F M + LP+
Sbjct: 475 GLYKKGLRREADALFRKMKEDGILPN 500
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 148/362 (40%), Gaps = 11/362 (3%)
Query: 97 SSNFVLRVLMSYQHLGRAKTLNFFSWAGTQ-MGFQFDDSVVEYMADFLGRRKLFDDMKCL 155
+ N V VL + G K L FF + + D S + D R L + L
Sbjct: 55 TPNLVNSVLKRLWNHG-PKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSL 113
Query: 156 LMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLC 215
+ + S + SPK +I G+ +A+ LF M GC D FN +L VLC
Sbjct: 114 IHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHE-HGCFQDLASFNTILDVLC 172
Query: 216 KKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRS 275
K + E+ EL R S DT + + G+C + R ALE+ +M + G+ P +
Sbjct: 173 KSKRVEKAYEL-FRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 276 AVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMG------GNSGAIQPAVEVFWA 329
N ++ + + + E + +R C I V G +G I+ A VF
Sbjct: 232 TYNTMLKGFFRAGQIRHAWE-FFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDE 290
Query: 330 VFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQ 389
+ G+LPS ++ LC+ E AV + + R Y ++++ L +
Sbjct: 291 MIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGE 350
Query: 390 VEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTA 449
L RM G +P YN +I ++ A+G+FE M CLP+ TY
Sbjct: 351 FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNI 410
Query: 450 LI 451
LI
Sbjct: 411 LI 412
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 117/276 (42%), Gaps = 10/276 (3%)
Query: 236 SPDTYSCGNTIVG--FCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGS 293
SP T++ IV + G+ A+++F M++ G ++ N ++ LC + +
Sbjct: 125 SPKTFA----IVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKA 180
Query: 294 VEKVRVRNTRRPCTILVPNMGGNSGAI----QPAVEVFWAVFNSGLLPSTFVVVKLMSEL 349
E R R + N+ N + A+EV + G+ P+ ++
Sbjct: 181 YELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGF 240
Query: 350 CRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKL 409
R GQ A + +++R Y V+ +++ A N+F M+ G+ P +
Sbjct: 241 FRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSV 300
Query: 410 GVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLME 469
YN++I +LC N+++A+ +FE M ++ P+ TY LI + +L+
Sbjct: 301 ATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQR 360
Query: 470 MLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKL 505
M G P QTYN++ E + L L K+
Sbjct: 361 MENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 179/420 (42%), Gaps = 18/420 (4%)
Query: 168 PKAMSICIRFLG--RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIE 225
P A + I F G + + AL ++E G K + + +L LCK+ E+ E
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYE-TAVDSGVKMNAYTCSILLNALCKEGKIEKAEE 375
Query: 226 LALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC 285
+ R K P+ I G+CR G L A M K G+ P A N LI C
Sbjct: 376 ILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFC 435
Query: 286 SLSEKKGSVEKVR------VRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPST 339
L E + + ++V V + IL+ G ++ + ++G +P+
Sbjct: 436 ELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYG-RKYEFDKCFDILKEMEDNGTMPNV 494
Query: 340 FVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGR 399
L++ LC+ + EA + R +E+R ++ Y +++ C ++E+A
Sbjct: 495 VSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKE 554
Query: 400 MLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKN 459
ML G++ L YN++I L G L A + +++K PD TY +LI +G N
Sbjct: 555 MLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN 614
Query: 460 WKVAYDLLMEMLGLGWIPELQTYNLVDNL-------LREHDRSDLCLKLERKLENHQLQK 512
+ L EM G P L+TY+L+ +L L E ++ LK + + N L
Sbjct: 615 VQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHC 674
Query: 513 LCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLL-ETTRRVQEPE 571
G ++ A+ K M+EK I L ++ K GKL R L+ E R EPE
Sbjct: 675 YAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPE 734
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 112/479 (23%), Positives = 186/479 (38%), Gaps = 96/479 (20%)
Query: 184 IHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCG 243
I EA LF + G P + +L L K + TI + L I P + G
Sbjct: 125 ISEAADLFFALRNE-GIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYG 183
Query: 244 NTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTR 303
I +L +G LE+F++M + P+ N+LI LC + + R
Sbjct: 184 KAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR 243
Query: 304 R--PCTILVPNM------GGN------------SGAIQPAVEVF----WAVFNSGLLPST 339
R P I + GN + I+P++ F +F +G++
Sbjct: 244 RLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDA 303
Query: 340 FVVVKLMSELCRL-------------GQTEEAVKLLRIVEERKLTCVEEGY-------AI 379
V+K M +L + E+A L + E T V+ G +I
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYE----TAVDSGVKMNAYTCSI 359
Query: 380 VMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKR 439
++ ALC ++E+A + GR +A GL P +YN++I C G+L A E M K+
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 440 CLPDNL-----------------------------------TYTALIHAHGKVKNWKVAY 464
PD+L TY LI +G+ + +
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479
Query: 465 DLLMEMLGLGWIPELQTYN-----------LVDNLLREHDRSDLCLKLERKLENHQLQKL 513
D+L EM G +P + +Y L++ + + D D + + ++ N +
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539
Query: 514 CKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQ-LLETTRRVQEPE 571
C G+++ A+ +K ML+KGI L+ +T GKL A LLE +R+ +P+
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 147/343 (42%), Gaps = 24/343 (6%)
Query: 166 VSPKAMSICIRFLGRHGRIHE---ALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEE 222
VSP + I +G +GR +E + +EME G P+ + + ++ LCK E
Sbjct: 455 VSPSVETYNI-LIGGYGRKYEFDKCFDILKEMEDN-GTMPNVVSYGTLINCLCKGSKLLE 512
Query: 223 TIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIG 282
+ + + SP I G C G++ A +M K G+ N LI
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 283 ELCSLSEKKGSVEKVRVRNTRRPCTILVPNM---------GGNSGAIQPAVEVFWAVFNS 333
L S++ K E + + +R+ L P++ G +G +Q + ++ + S
Sbjct: 573 GL-SMTGKLSEAEDLLLEISRKG---LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRS 628
Query: 334 GLLPSTFVVVKLMSELCRLGQTEEAVKLL-RIVEERKLTCVEEGYAIVMKALCDHCQVEE 392
G+ P T L+ LC T+E ++L R+ E L Y V+ H +E+
Sbjct: 629 GIKP-TLKTYHLLISLC----TKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEK 683
Query: 393 ASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIH 452
A NL +M+ + YNS+I +G L + + MN + P+ TY ++
Sbjct: 684 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVK 743
Query: 453 AHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRS 495
H +VK++ AY EM G++ ++ N + + L+E RS
Sbjct: 744 GHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRS 786
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 123/296 (41%), Gaps = 46/296 (15%)
Query: 317 SGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEG 376
S I A ++F+A+ N G+ PS+ + L+ L + Q + + + E +
Sbjct: 122 SKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFM 181
Query: 377 YAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMN 436
Y ++A V + LF RM + P + +YN +I LC ++ A +F+ M
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML 241
Query: 437 KKRCLPDNLTYTALIHAHGKV----KNWKV------------------------------ 462
+R LP +TY LI + K K++KV
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVE 301
Query: 463 -AYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLER-------KLENHQ----L 510
A ++L EM LG++P+ T++++ + +++++ L + K+ + L
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILL 361
Query: 511 QKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTRR 566
LCK G+++ A E + KG+ + +T + + G L AR +E +
Sbjct: 362 NALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEK 417
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 158/394 (40%), Gaps = 59/394 (14%)
Query: 181 HG-RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDT 239
HG RI +A++L ++M + G KPD + F +++ L + E + L R+ + PD
Sbjct: 160 HGNRISDAVALVDQMVEM-GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDL 218
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRV 299
+ G + G C+ G AL + ++M + + +I LC +
Sbjct: 219 VTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE--------- 269
Query: 300 RNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAV 359
A+ +F + N G+ P+ L+S LC G+ +A
Sbjct: 270 ---------------------DDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDAS 308
Query: 360 KLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISML 419
+LL + ERK+ ++ ++ A ++ +A L+ M+ + P + Y+S+I+
Sbjct: 309 RLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
Query: 420 CTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPEL 479
C L L A + ELM +K CLP+ +TY LI+ K K +L EM G +
Sbjct: 369 CMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNT 428
Query: 480 QTY-NLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSA 538
TY L+ + D D A K M+ G+H +
Sbjct: 429 VTYTTLIHGFFQARD-------------------------CDNAQMVFKQMVSVGVHPNI 463
Query: 539 YARDTFEHVFQKNGKLKIARQLLETTRR-VQEPE 571
+ KNGKL A + E +R EP+
Sbjct: 464 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 497
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 163/369 (44%), Gaps = 28/369 (7%)
Query: 202 PDNLVFNNVLYVLCKKQSSEETIELALRIFHKME----SPDTYSCGNTIVGFCRLGRLGA 257
P + F+ +L + K +L + KME S + Y+ I FCR RL
Sbjct: 76 PSIIEFSKLLSAIAKMNK----FDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSL 131
Query: 258 ALEIFSQMNKIGVLPTRSAVNMLIGELC---SLSEKKGSVEKVRVRNTRRPCTI----LV 310
AL + +M K+G P +N L+ C +S+ V+++ V +P T+ L+
Sbjct: 132 ALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQM-VEMGYKPDTVTFTTLI 190
Query: 311 PNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKL 370
+ ++ A AV + + G P +++ LC+ G T+ A+ LL +E K+
Sbjct: 191 HGLFLHNKA-SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKI 249
Query: 371 TCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMG 430
Y+ V+ +LC + ++A NLF M G++P + Y+S+IS LC G A
Sbjct: 250 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASR 309
Query: 431 VFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLR 490
+ M +++ P+ +T++ALI A K A L EM+ P + TY+ + N
Sbjct: 310 LLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369
Query: 491 EHDR---SDLCLKLERKLE--------NHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAY 539
DR + L+L + + N + CK ++D E + M ++G+ +
Sbjct: 370 MLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429
Query: 540 ARDTFEHVF 548
T H F
Sbjct: 430 TYTTLIHGF 438
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 107/256 (41%), Gaps = 17/256 (6%)
Query: 320 IQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAI 379
+ A+ +F + S PS KL+S + ++ + + + +E ++ Y I
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 380 VMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKR 439
++ C ++ A L G+M+ G +P + NS+++ C + A+ + + M +
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 440 CLPDNLTYTALIHA---HGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSD 496
PD +T+T LIH H K A L+ M+ G P+L TY V N L + +D
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASE---AVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTD 235
Query: 497 LCLKLERKLENHQLQ-----------KLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFE 545
L L L K+E +++ LCK D A M KG+ + +
Sbjct: 236 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 295
Query: 546 HVFQKNGKLKIARQLL 561
G+ A +LL
Sbjct: 296 SCLCNYGRWSDASRLL 311
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 167/399 (41%), Gaps = 42/399 (10%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
IR L + A + ME GC + + +N ++ LCKKQ E + + + K
Sbjct: 234 IRSLCELKDLSRAKEMIAHMEAT-GCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKD 292
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV 294
PD + + G C++ LE+ +M + P+ +AV+ L V
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL-------------V 339
Query: 295 EKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQ 354
E +R R G I+ A+ + V + G+ P+ FV L+ LC+ +
Sbjct: 340 EGLRKR-----------------GKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRK 382
Query: 355 TEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNS 414
EA L + + L + Y+I++ C +++ A + G M+ GLK + YNS
Sbjct: 383 FHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 415 VISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLG 474
+I+ C G++ A G M K+ P +TYT+L+ + A L EM G G
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 475 WIPELQTY-NLVDNLLRE----------HDRSDLCLKLERKLENHQLQKLCKLGQLDAAY 523
P + T+ L+ L R ++ ++ +K R N ++ C+ G + A+
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAF 562
Query: 524 EKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLE 562
E K M EKGI Y+ H G+ A+ ++
Sbjct: 563 EFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 152/354 (42%), Gaps = 14/354 (3%)
Query: 147 KLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLV 206
++ D+M CL + S A+S + L + G+I EAL+L + + FG P+ V
Sbjct: 318 EMMDEMLCLRFSP-------SEAAVSSLVEGLRKRGKIEEALNLVKRV-VDFGVSPNLFV 369
Query: 207 FNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMN 266
+N ++ LCK + E L R+ P+ + I FCR G+L AL +M
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 267 KIGVLPTRSAVNMLIGELC---SLSEKKGSVEKVRVRNTRRPCTILVPNMGG--NSGAIQ 321
G+ + N LI C +S +G + ++ + MGG + G I
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 322 PAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVM 381
A+ ++ + G+ PS + L+S L R G +AVKL + E + Y +++
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 382 KALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCL 441
+ C+ + +A M G+ P Y +I LC G A + ++K C
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 609
Query: 442 PDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN-LVDNLLREHDR 494
+ + YT L+H + + A + EM+ G +L Y L+D L+ DR
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDR 663
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 175/438 (39%), Gaps = 43/438 (9%)
Query: 126 QMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIH 185
++G + +D + D RR D L + K+S + I + G I
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454
Query: 186 EALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKME----SPDTYS 241
A EM +P + + +++ C K I ALR++H+M +P Y+
Sbjct: 455 AAEGFMAEMINK-KLEPTVVTYTSLMGGYCSKGK----INKALRLYHEMTGKGIAPSIYT 509
Query: 242 CGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRN 301
+ G R G + A+++F++M + V P R N++I C + + E ++
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 302 TRRPCTILVPNMGGNSGAIQPAVEVFWA----VFNSGLLPST-----FVVVKLMSELCRL 352
+ +VP+ I A VF GL L+ CR
Sbjct: 570 EKG----IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCRE 625
Query: 353 GQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVY 412
G+ EEA+ + + + +R + Y +++ H + L M GLKP +Y
Sbjct: 626 GKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIY 685
Query: 413 NSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLG 472
S+I G+ A G+++LM + C+P+ +TYTA+I+ K A L +M
Sbjct: 686 TSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQP 745
Query: 473 LGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQ----------------LQKLCKL 516
+ +P TY ++L + + + +++ +E H ++ C+
Sbjct: 746 VSSVPNQVTYGCFLDILTKGE-----VDMQKAVELHNAILKGLLANTATYNMLIRGFCRQ 800
Query: 517 GQLDAAYEKAKSMLEKGI 534
G+++ A E M+ G+
Sbjct: 801 GRIEEASELITRMIGDGV 818
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 150/380 (39%), Gaps = 78/380 (20%)
Query: 178 LGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESP 237
L R G I +A+ LF EM + KP+ + +N ++ C++ + E + K P
Sbjct: 517 LFRAGLIRDAVKLFNEMAE-WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 238 DTYS--------C-----------------GNT----------IVGFCRLGRLGAALEIF 262
DTYS C GN + GFCR G+L AL +
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635
Query: 263 SQMNKIGVLPTRSAVNMLIGELCSLSEKK---GSVEKVRVRNTRRPCTILVPNM---GGN 316
+M + GV +LI ++K G ++++ R + P ++ +M
Sbjct: 636 QEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLK-PDDVIYTSMIDAKSK 694
Query: 317 SGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEA------------------ 358
+G + A ++ + N G +P+ +++ LC+ G EA
Sbjct: 695 TGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVT 754
Query: 359 ------------VKLLRIVEE-----RKLTCVEEGYAIVMKALCDHCQVEEASNLFGRML 401
V + + VE + L Y ++++ C ++EEAS L RM+
Sbjct: 755 YGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMI 814
Query: 402 ACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWK 461
G+ P Y ++I+ LC ++ A+ ++ M +K PD + Y LIH
Sbjct: 815 GDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMG 874
Query: 462 VAYDLLMEMLGLGWIPELQT 481
A +L EML G IP +T
Sbjct: 875 KATELRNEMLRQGLIPNNKT 894
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 139/342 (40%), Gaps = 18/342 (5%)
Query: 237 PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSL------SEK 290
P+ + + G + G A+E+F+ M +G+ P +I LC L E
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 291 KGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELC 350
+E P +L+ + + AV + + L P L+ LC
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQ-KVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLC 308
Query: 351 RLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLG 410
++ + E ++++ + + + E + +++ L ++EEA NL R++ G+ P L
Sbjct: 309 KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLF 368
Query: 411 VYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEM 470
VYN++I LC A +F+ M K P+++TY+ LI + A L EM
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 471 LGLGWIPELQTYN-LVDNLLREHDRSD----LCLKLERKLE------NHQLQKLCKLGQL 519
+ G + YN L++ + D S + + +KLE + C G++
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 520 DAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLL 561
+ A M KGI S Y T + G ++ A +L
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
IR R GRI EA L M G PD + + ++ LC++ ++ IEL + K
Sbjct: 794 IRGFCRQGRIEEASELITRM-IGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKG 852
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLP 272
PD + I G C G +G A E+ ++M + G++P
Sbjct: 853 IRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 162/384 (42%), Gaps = 23/384 (5%)
Query: 117 LNFFSWAGTQMGFQ--FDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSIC 174
L F W Q +Q D+SVV + LG+ + + + + +
Sbjct: 155 LRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSL 214
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
I GR EA+++F++ME GCKP + +N +L V K + I + KM
Sbjct: 215 ISAFANSGRYREAVNVFKKMEED-GCKPTLITYNVILNVFGKMGTPWNKI---TSLVEKM 270
Query: 235 ES----PDTYSCGNTIVGFCRLGRL-GAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSE 289
+S PD Y+ NT++ C+ G L A ++F +M G + N L+ ++ S
Sbjct: 271 KSDGIAPDAYTY-NTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALL-DVYGKSH 328
Query: 290 KKGSVEKV---RVRNTRRPCTILVPNM---GGNSGAIQPAVEVFWAVFNSGLLPSTFVVV 343
+ KV V N P + ++ G + A+E+ + G P F
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388
Query: 344 KLMSELCRLGQTEEAVKLLRIVEERKLTCVEE--GYAIVMKALCDHCQVEEASNLFGRML 401
L+S R G+ E A+ + E R C + +K + + E +F +
Sbjct: 389 TLLSGFERAGKVESAMSIFE--EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 402 ACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWK 461
CGL P + +N+++++ G GVF+ M + +P+ T+ LI A+ + +++
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Query: 462 VAYDLLMEMLGLGWIPELQTYNLV 485
A + ML G P+L TYN V
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTV 530
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 119/292 (40%), Gaps = 31/292 (10%)
Query: 179 GRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPD 238
G+ R EA+ + EM + G P + +N+++ + +E +EL ++ K PD
Sbjct: 325 GKSHRPKEAMKVLNEM-VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPD 383
Query: 239 TYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVR 298
++ + GF R G++ +A+ IF +M G P N I
Sbjct: 384 VFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI----------------- 426
Query: 299 VRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEA 358
M GN G +++F + GL P L++ + G E
Sbjct: 427 -------------KMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEV 473
Query: 359 VKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISM 418
+ + ++ E + ++ A E+A ++ RML G+ P L YN+V++
Sbjct: 474 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 533
Query: 419 LCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEM 470
L G + + V M RC P+ LTY +L+HA+ K + + L E+
Sbjct: 534 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 144/377 (38%), Gaps = 44/377 (11%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
I+ G G+ E + +F+E+ V G PD + +N +L V + E + +
Sbjct: 426 IKMYGNRGKFTEMMKIFDEI-NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 484
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLI-----GELCSLSE 289
P+ + I + R G A+ ++ +M GV P S N ++ G + SE
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE 544
Query: 290 KK-GSVEKVRVR-NTRRPCTILVPNMGGN-------------SGAIQP------------ 322
K +E R + N C++L G SG I+P
Sbjct: 545 KVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVC 604
Query: 323 --------AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVE 374
A F + G P + ++S R +A +L ++ER T
Sbjct: 605 SKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSM 664
Query: 375 EGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFEL 434
Y +M ++ + +LA G+KP + YN+VI C + A +F
Sbjct: 665 ATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSE 724
Query: 435 MNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN-LVDNL--LRE 491
M +PD +TY I ++ ++ A ++ M+ G P TYN +VD L
Sbjct: 725 MRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNR 784
Query: 492 HDRSDLCLKLERKLENH 508
D + L ++ R L+ H
Sbjct: 785 KDEAKLFVEDLRNLDPH 801
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 106/259 (40%), Gaps = 27/259 (10%)
Query: 309 LVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEER 368
++ +M G G + A +F + G + L+S G+ EAV + + +EE
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 369 KLTCVEEGYAIVMKALCD-HCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNL-D 426
Y +++ + ++L +M + G+ P YN++I+ C G+L
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQ 296
Query: 427 HAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVD 486
A VFE M D +TY AL+ +GK K A +L EM+ G+ P + TYN
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYN--- 353
Query: 487 NLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEH 546
+L+ + R G LD A E M EKG + T
Sbjct: 354 SLISAYARD---------------------GMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 547 VFQKNGKLKIARQLLETTR 565
F++ GK++ A + E R
Sbjct: 393 GFERAGKVESAMSIFEEMR 411
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/503 (20%), Positives = 196/503 (38%), Gaps = 93/503 (18%)
Query: 146 RKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNL 205
R++FDDM + +++ Q ++ + G++ +AL + E M + F PDN+
Sbjct: 189 REVFDDMVKIGVSLNVQ-------TFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNV 241
Query: 206 VFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQM 265
+N +L + KK + EL L + P+ + N + G+C+LG L A +I M
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 266 NKIGVLPTRSAVNMLIGELCSLSEKKGSVE------------KVRVRNT----------- 302
+ VLP N+LI LC+ + +E V NT
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLS 361
Query: 303 --RRPCTILVPNMGGNSGAIQPAVEVFW----------------AVFNSGLLPSTFVVVK 344
R + N G + + + + W V G P
Sbjct: 362 LEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHT 421
Query: 345 LMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFG------ 398
L+ ++G A++++R + ++ + ++ ALC +++EA NL
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481
Query: 399 -----------------------------RMLACGLKPKLGVYNSVISMLCTLGNLDHAM 429
M + P + +NS+I LC G + AM
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAM 541
Query: 430 GVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLL 489
F+ + + LPD+ T+ ++I + K + A++ E + + P+ T N++ N L
Sbjct: 542 EKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601
Query: 490 REHDRSDLCLKL------ERKLE----NHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAY 539
+ ++ L ER+++ N + CK +L AY+ M EKG+ +
Sbjct: 602 CKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRF 661
Query: 540 ARDTFEHVFQKNGKLKIARQLLE 562
++F + ++GKL +LL+
Sbjct: 662 TYNSFISLLMEDGKLSETDELLK 684
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 106/482 (21%), Positives = 199/482 (41%), Gaps = 54/482 (11%)
Query: 117 LNFFSWAGTQMGFQF-DDS---VVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMS 172
++FF WA T + F DS ++ + L K F D K LL++ + S ++S
Sbjct: 59 VSFFQWAQTSIPEAFPSDSPLPLISVVRSLLSHHK-FADAKSLLVSYI----RTSDASLS 113
Query: 173 ICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFH 232
+C L H +H P +F+ L E +AL+IF
Sbjct: 114 LCNSLL--HPNLH------------LSPPPSKALFDIALSAYLH----EGKPHVALQIFQ 155
Query: 233 KME----SPDTYSCGNTIVGFCRLGR---LGAALEIFSQMNKIGVLPTRSAVNMLIGELC 285
KM P+ +C ++G R + +A E+F M KIGV N+L+ C
Sbjct: 156 KMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYC 215
Query: 286 ---SLSEKKGSVEKVRVRNTRRPCTIL---VPNMGGNSGAIQPAVEVFWAVFNSGLLPST 339
L + G +E++ P + + G + E+ + +GL+P+
Sbjct: 216 LEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNR 275
Query: 340 FVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGR 399
L+ C+LG +EA +++ ++++ + Y I++ LC+ + E L
Sbjct: 276 VTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDA 335
Query: 400 MLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKN 459
M + L+P + YN++I LG A + E M + +T+ + K +
Sbjct: 336 MKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEK 395
Query: 460 WKVAYDLLMEMLGL-GWIPELQTYN-LVDNLLREHDRSDLCLKLERKLE----------- 506
+ + E++ + G+ P++ TY+ L+ L+ D S L++ R++
Sbjct: 396 REAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSG-ALEMMREMGQKGIKMNTITL 454
Query: 507 NHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTRR 566
N L LCK +LD A+ S ++G + T F + K++ A ++ + ++
Sbjct: 455 NTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Query: 567 VQ 568
V+
Sbjct: 515 VK 516
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 146/311 (46%), Gaps = 33/311 (10%)
Query: 180 RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLC-KKQSSEETIELALRIFHKMESPD 238
+ G++ EA L++EM T G P+ + +N ++ C + + SE L L + +K SPD
Sbjct: 310 KEGKLQEANELYKEMIT-RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC-SPD 367
Query: 239 TYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVR 298
+ + I G+C + R+ +++F ++K G++ ++L+ C
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC------------- 414
Query: 299 VRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEA 358
SG I+ A E+F + + G+LP L+ LC G+ E+A
Sbjct: 415 -----------------QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457
Query: 359 VKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISM 418
+++ +++ K+ Y +++ +C +VE+A NLF + G+KP + Y +IS
Sbjct: 458 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 517
Query: 419 LCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPE 478
LC G+L A + M + P++ TY LI AH + + + L+ EM G+ +
Sbjct: 518 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
Query: 479 LQTYNLVDNLL 489
+ +V ++L
Sbjct: 578 ASSIKMVIDML 588
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 181/410 (44%), Gaps = 53/410 (12%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
I+ L G++ EA+ L + M GC+PD + +N+++ +C+ + LAL + KM
Sbjct: 165 IKGLFLEGKVSEAVVLVDRM-VENGCQPDVVTYNSIVNGICRSGDT----SLALDLLRKM 219
Query: 235 ES----PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEK 290
E D ++ I CR G + AA+ +F +M G+ + N L+ LC K
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC----K 275
Query: 291 KGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELC 350
G N GA+ + + + ++P+ L+
Sbjct: 276 AGK---------------------WNDGAL-----LLKDMVSREIVPNVITFNVLLDVFV 309
Query: 351 RLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLG 410
+ G+ +EA +L + + R ++ Y +M C ++ EA+N+ M+ P +
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 411 VYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEM 470
+ S+I C + +D M VF ++K+ + + +TY+ L+ + K+A +L EM
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 471 LGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQL-----------QKLCKLGQL 519
+ G +P++ TY ++ + L ++ + + L++ L+ ++ + +CK G++
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 520 DAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTRRVQE 569
+ A+ S+ KG+ + K G L A LL R+++E
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL---RKMEE 536
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 148/375 (39%), Gaps = 41/375 (10%)
Query: 198 FGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGA 257
G +PD FN ++ L + E + L R+ PD + + + G CR G
Sbjct: 152 LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL 211
Query: 258 ALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNS 317
AL++ +M + V + +I LC
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLC------------------------------RD 241
Query: 318 GAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGY 377
G I A+ +F + G+ S L+ LC+ G+ + LL+ + R++ +
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF 301
Query: 378 AIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNK 437
+++ +++EA+ L+ M+ G+ P + YN+++ C L A + +LM +
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 438 KRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDL 497
+C PD +T+T+LI + VK + + G + TY+++ + + L
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 421
Query: 498 CLKLERKLENHQ-----------LQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEH 546
+L +++ +H L LC G+L+ A E + + + + L T
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 547 VFQKNGKLKIARQLL 561
K GK++ A L
Sbjct: 482 GMCKGGKVEDAWNLF 496
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 173/406 (42%), Gaps = 46/406 (11%)
Query: 172 SICIRFLGRHGRIH----EALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELA 227
++C R R G + +A++LF+EM P + F+ + + + ++
Sbjct: 53 NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPL-PSLVDFSRFFSAIARTKQFNLVLDFC 111
Query: 228 LRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSL 287
++ + + Y+ I FCR + A + ++ K+G P + N LI
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLI------ 165
Query: 288 SEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMS 347
KG + +V +LV M N QP V + ++ N
Sbjct: 166 ---KGLFLEGKVSEA----VVLVDRMVEN--GCQPDVVTYNSIVNG-------------- 202
Query: 348 ELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKP 407
+CR G T A+ LLR +EER + Y+ ++ +LC ++ A +LF M G+K
Sbjct: 203 -ICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 408 KLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLL 467
+ YNS++ LC G + + + M + +P+ +T+ L+ K + A +L
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 468 MEMLGLGWIPELQTYN-LVDNLLREHDRSDLCLKLERKLENH----------QLQKLCKL 516
EM+ G P + TYN L+D ++ S+ L+ + N ++ C +
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 517 GQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLE 562
++D + +++ ++G+ +A F ++GK+K+A +L +
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 169/396 (42%), Gaps = 14/396 (3%)
Query: 120 FSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMT-VASQKGK--VSPKAMSICIR 176
F WA + GF S+ + + + L + + F+ L+ V S +G VS + IR
Sbjct: 122 FKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIR 181
Query: 177 FLGRHGRIHEALSLFE---EMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHK 233
R G + +A+ FE E V + + +L LCK+ E RI
Sbjct: 182 RYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGT 241
Query: 234 MES---PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEK 290
M+S P + G+ R +L A +++ +M + V PT LI C +
Sbjct: 242 MDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRV 301
Query: 291 KGS---VEKVRVRNTRRPCTILVPNMGG--NSGAIQPAVEVFWAVFNSGLLPSTFVVVKL 345
+ + +E++++ + P + G +G + A+ + F P+ L
Sbjct: 302 QIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSL 361
Query: 346 MSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGL 405
+ C+ G A K+L+++ R + Y K H + EE NL+ +++ G
Sbjct: 362 VKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGH 421
Query: 406 KPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYD 465
P Y+ ++ MLC G L AM V + M + PD LT T LIH +++ + A++
Sbjct: 422 SPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFE 481
Query: 466 LLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKL 501
+ G IP+ T+ ++DN LR SD+ +L
Sbjct: 482 EFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRL 517
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/412 (20%), Positives = 162/412 (39%), Gaps = 60/412 (14%)
Query: 191 FEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFC 250
+ EM+ F P +F++V+ LCK + E L E + S IV
Sbjct: 124 WAEMKPGFTLSPS--LFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIR 181
Query: 251 RLGRLGA------ALEIFSQMNKIGVLPTR-SAVNMLIGELCSLSEKKGSVEKVRVRNTR 303
R R G A E + T + +L+ LC K+G V
Sbjct: 182 RYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALC----KEGHV--------- 228
Query: 304 RPCTILVPNMGGNSGA-IQPAVEVFWAVFNS--------------------GLLPSTFVV 342
R ++ + +GG + P+V +F + N + P+
Sbjct: 229 REASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTY 288
Query: 343 VKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAI---VMKALCDHCQVEEASNLFGR 399
L+ CR+ + + A+++L EE K+ +E + + ++ L + ++ EA + R
Sbjct: 289 GTLIEGYCRMRRVQIAMEVL---EEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMER 345
Query: 400 MLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKN 459
C P + YNS++ C G+L A + ++M + P TY K
Sbjct: 346 FFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNK 405
Query: 460 WKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQK------- 512
+ +L +++ G P+ TY+L+ +L E + L +++ ++++N +
Sbjct: 406 TEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTM 465
Query: 513 ----LCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQL 560
LC+L L+ A+E+ + + +GI ++ + G +A++L
Sbjct: 466 LIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRL 517
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 176/434 (40%), Gaps = 36/434 (8%)
Query: 154 CLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCK-------PDNLV 206
CLL QKG +P + RF GR + EE +F CK P +
Sbjct: 20 CLL-----QKG--NPVIVPFISRFWGRTFSTKRSSMNLEEEIDLF-CKMIQSRPLPSIVD 71
Query: 207 FNNVLYVLCKKQSSEETIELALRIFHKME----SPDTYSCGNTIVGFCRLGRLGAALEIF 262
F+ VL K + + +L + +FH ME D YS I CR R AL +
Sbjct: 72 FSKVL----SKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 127
Query: 263 SQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTR--RPCTILVPNMGGNS--- 317
+M K G P V+ LI C + +++ V RP ++ + S
Sbjct: 128 GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKI 187
Query: 318 GAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGY 377
G + AVE+F + G+ L++ LC G+ +A +L+R + R + +
Sbjct: 188 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF 247
Query: 378 AIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNK 437
V+ + EA L+ M + P + YNS+I+ LC G +D A + +LM
Sbjct: 248 TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT 307
Query: 438 KRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDL 497
K CLPD +TY LI+ K K L EM G + + TYN + + R D
Sbjct: 308 KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDA 367
Query: 498 CLKLERKLENHQ--------LQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQ 549
++ ++++ L LC +++ A ++M + I L + H
Sbjct: 368 AQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMC 427
Query: 550 KNGKLKIARQLLET 563
K G ++ A L +
Sbjct: 428 KIGNVEDAWDLFRS 441
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 159/388 (40%), Gaps = 52/388 (13%)
Query: 170 AMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALR 229
+ +I I L R R ALS+ +M FG +PD + ++++ C+ + I+L +
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMK-FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 164
Query: 230 IFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSE 289
+ PD I G C++G + A+E+F +M + GV N L+ LC
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 290 KKGSVEKVRVRNTRRPCTILVPNMGG---------NSGAIQPAVEVFWAVFNSGLLPSTF 340
+ +R R +VPN+ G A++++ + + P F
Sbjct: 225 WSDAARLMRDMVMRD----IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
Query: 341 VVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRM 400
L++ LC G+ +EA ++L ++ + Y ++ C +V+E + LF M
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 401 LACGL--------------------------------KPKLGVYNSVISMLCTLGNLDHA 428
GL +P + Y+ ++ LC ++ A
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKA 400
Query: 429 MGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNL 488
+ +FE M K D TY +IH K+ N + A+DL + G P++ +Y + +
Sbjct: 401 LVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 460
Query: 489 L---REHDRSDLCLKLERKLENHQLQKL 513
R+ D+SDL L RK++ L L
Sbjct: 461 FCRKRQWDKSDL---LYRKMQEDGLLPL 485
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 14/229 (6%)
Query: 356 EEAVKLL-RIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNS 414
EE + L ++++ R L + + ++ V+ + + +LF M CG+ L YN
Sbjct: 51 EEEIDLFCKMIQSRPLPSIVD-FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 415 VISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLG 474
VI+ LC A+ V M K PD +T ++LI+ + A DL+ +M +G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 475 WIPELQTYN-LVDNLLR---EHDRSDLCLKLERK-------LENHQLQKLCKLGQLDAAY 523
+ P++ YN ++D + +D +L ++ER N + LC G+ A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 524 EKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLL-ETTRRVQEPE 571
+ M+ + I + VF K GK A +L E TRR +P+
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 173/396 (43%), Gaps = 22/396 (5%)
Query: 181 HGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTY 240
+G +H+ +SL G PD N +++ CK I L LR +++ S DT
Sbjct: 106 NGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL-LR--NRVISIDTV 162
Query: 241 SCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSE---KKGSVEKV 297
+ I G C G A + S+M K+G+LP + N LI C + K V+++
Sbjct: 163 TYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI 222
Query: 298 RVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEE 357
N +L N AI+ E + + SG P +++ LC+ G+ E
Sbjct: 223 SELNLITHTILLSSYY--NLHAIE---EAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLE 277
Query: 358 AVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVIS 417
LLR +EE + Y ++ +L A L+ +M+ G+ L VY ++
Sbjct: 278 GGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMD 337
Query: 418 MLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIP 477
L G+L A F+++ + +P+ +TYTAL+ K + A ++ +ML IP
Sbjct: 338 GLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIP 397
Query: 478 ELQTYNLVDNLLREHDRSDLCLKLERKLENHQ-----------LQKLCKLGQLDAAYEKA 526
+ TY+ + N + + + L RK+E+ + L K G+ + A E +
Sbjct: 398 NVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELS 457
Query: 527 KSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLE 562
K M G+ + Y D + ++ G++K + L++
Sbjct: 458 KEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVK 493
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 125/292 (42%), Gaps = 40/292 (13%)
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES----PDTYSCGNTIVG-FCRLG 253
G +PD FN ++ Q + E L+++ KM+S P SC N +VG C G
Sbjct: 568 GIEPDIATFN----IMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSC-NIVVGMLCENG 622
Query: 254 RLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNM 313
++ A+ I +QM + + P + + + + S ++ ++ K
Sbjct: 623 KMEEAIHILNQMMLMEIHPNLTTYRIFL-DTSSKHKRADAIFKT---------------- 665
Query: 314 GGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCV 373
+ + +++ V+N+ L++ LC+LG T++A ++ +E R
Sbjct: 666 --HETLLSYGIKLSRQVYNT-----------LIATLCKLGMTKKAAMVMGDMEARGFIPD 712
Query: 374 EEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFE 433
+ +M V +A + + M+ G+ P + YN++I L G +
Sbjct: 713 TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLS 772
Query: 434 LMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLV 485
M + PD+ TY ALI K+ N K + + EM+ G +P+ TYN++
Sbjct: 773 EMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVL 824
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 166/411 (40%), Gaps = 55/411 (13%)
Query: 177 FLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES 236
L + +H + +M + G PD + F++++ LCK E L LR +M
Sbjct: 233 LLSSYYNLHAIEEAYRDM-VMSGFDPDVVTFSSIINRLCKGGKVLEG-GLLLREMEEMSV 290
Query: 237 PDTYSCGNTIV-GFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVE 295
+ T+V + AL ++SQM G+ +L+ L + + + +
Sbjct: 291 YPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEK 350
Query: 296 --KVRVRNTRRP----CTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSEL 349
K+ + + + P T LV + +G + A + + ++P+ +++
Sbjct: 351 TFKMLLEDNQVPNVVTYTALVDGLC-KAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGY 409
Query: 350 CRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKL 409
+ G EEAV LLR +E++ + Y V+ L + E A L M G++
Sbjct: 410 VKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENN 469
Query: 410 GVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKN---------- 459
+ +++++ L +G + G+ + M K D + YT+LI K +
Sbjct: 470 YILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEE 529
Query: 460 -------WK-VAYDLLME-MLGLG-----WI----------PELQTYNLVDNLLREHDRS 495
W V+Y++L+ ML G W P++ T+N++ N R+ S
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDS 589
Query: 496 DLCLKLERKLE-----------NHQLQKLCKLGQLDAAYEKAKSMLEKGIH 535
+ LKL K++ N + LC+ G+++ A M+ IH
Sbjct: 590 EGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIH 640
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 157/393 (39%), Gaps = 59/393 (15%)
Query: 181 HG-RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDT 239
HG RI +A++L ++M + G +PD + F +++ L + E + L R+ + P+
Sbjct: 167 HGKRISDAVALVDQMVEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRV 299
+ G + G C+ G + A + ++M + + +I LC +
Sbjct: 226 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE--------- 276
Query: 300 RNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAV 359
A+ +F + N G+ P+ L+S LC + +A
Sbjct: 277 ---------------------DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 360 KLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISML 419
+LL + ERK+ + ++ A ++ EA L+ M+ + P + Y+S+I+
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 420 CTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPEL 479
C LD A +FELM K C P+ +TY LI+ K K +L EM G +
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 480 QTYN-LVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSA 538
TY L+ + D D A K M+ G+H +
Sbjct: 436 VTYTTLIHGFFQARD-------------------------CDNAQMVFKQMVSDGVHPNI 470
Query: 539 YARDTFEHVFQKNGKLKIARQLLETTRRVQ-EP 570
+T KNGKL+ A + E +R + EP
Sbjct: 471 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 160/365 (43%), Gaps = 20/365 (5%)
Query: 202 PDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEI 261
P FN +L + K + + I L ++ S + Y+ I FCR ++ AL +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 262 FSQMNKIGVLPTRSAVNMLIGELC---SLSEKKGSVEKVRVRNTRRPCTI----LVPNMG 314
+M K+G P+ ++ L+ C +S+ V+++ V RP TI L+ +
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM-VEMGYRPDTITFTTLIHGLF 201
Query: 315 GNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVE 374
++ A + AV + + G P+ +++ LC+ G + A LL +E K+
Sbjct: 202 LHNKASE-AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANV 260
Query: 375 EGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFEL 434
Y+ V+ +LC + ++A NLF M G++P + Y+S+IS LC A +
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 435 MNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDR 494
M +++ P+ +T+ ALI A K A L EM+ P++ TY+ + N HDR
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 495 SDLCLKLERKL-----------ENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDT 543
D + + N + CK ++D E + M ++G+ + T
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 544 FEHVF 548
H F
Sbjct: 441 LIHGF 445
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 135/329 (41%), Gaps = 31/329 (9%)
Query: 155 LLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVL 214
LL + + K + + S I L ++ +AL+LF EME G +P+ + +++++ L
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK-GVRPNVITYSSLISCL 305
Query: 215 CKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTR 274
C + + L + + +P+ + I F + G+L A +++ +M K + P
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
Query: 275 SAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSG 334
+ LI C + A +F + +
Sbjct: 366 FTYSSLINGFCMHDR------------------------------LDEAKHMFELMISKD 395
Query: 335 LLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEAS 394
P+ L++ C+ + +E V+L R + +R L Y ++ + A
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Query: 395 NLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAH 454
+F +M++ G+ P + YN+++ LC G L+ AM VFE + + + P TY +I
Sbjct: 456 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515
Query: 455 GKVKNWKVAYDLLMEMLGLGWIPELQTYN 483
K + +DL + G P++ YN
Sbjct: 516 CKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 5/250 (2%)
Query: 202 PDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEI 261
P+ + FN ++ K+ E +L + + PD ++ + I GFC RL A +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 262 FSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQ 321
F M P N LI C VE R + R V G Q
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 322 P-----AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEG 376
A VF + + G+ P+ L+ LC+ G+ E+A+ + ++ K+
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 507
Query: 377 YAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMN 436
Y I+++ +C +VE+ +LF + G+KP + +YN++IS C G + A +F M
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Query: 437 KKRCLPDNLT 446
+ LPD+ T
Sbjct: 568 EDGPLPDSGT 577
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 103/235 (43%), Gaps = 17/235 (7%)
Query: 314 GGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCV 373
G +S + A+ +F + S LPS F KL+S + ++ + + + L ++ ++
Sbjct: 60 GLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHN 119
Query: 374 EEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFE 433
Y I++ C Q+ A L G+M+ G +P + +S+++ C + A+ + +
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 434 LMNKKRCLPDNLTYTALIHA---HGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLR 490
M + PD +T+T LIH H K A L+ M+ G P L TY +V N L
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASE---AVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 491 EHDRSDLCLKLERKLENHQLQ-----------KLCKLGQLDAAYEKAKSMLEKGI 534
+ DL L K+E +++ LCK D A M KG+
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 291
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 180/417 (43%), Gaps = 27/417 (6%)
Query: 172 SICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIF 231
+I ++ L R+ +A+SL EM PD +N V+ C+ + E+ +ELA +
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRN-SLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 232 HKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCS---LS 288
S + G I FC+ G++ A+ +M +G+ LI C L
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 289 EKKGSVEKVRVRNTRRPCTILVPNMGGNS---GAIQPAVEVFWAVFNSGLLPSTFVVVKL 345
K ++V R PC I + G ++ A E+F + G+ P+ + L
Sbjct: 265 RGKALFDEVLERGD-SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGL 323
Query: 346 MSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGL 405
+ LC +G+T+EA++LL ++ E+ Y I++ LC V +A + M
Sbjct: 324 IDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRT 383
Query: 406 KPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCL--PDNLTYTALIHAHGKVKNWKVA 463
+P YN ++ LC G+LD A + LM K PD ++Y ALIH K A
Sbjct: 384 RPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQA 443
Query: 464 ---YDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQK-------- 512
YDLL+E LG G + T L+++ L+ D + ++L +++ + ++ +
Sbjct: 444 LDIYDLLVEKLGAG--DRVTTNILLNSTLKAGDVNK-AMELWKQISDSKIVRNSDTYTAM 500
Query: 513 ---LCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTRR 566
CK G L+ A M + S + + K G L A +L E +R
Sbjct: 501 IDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQR 557
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 186/440 (42%), Gaps = 48/440 (10%)
Query: 167 SPKAMS--ICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETI 224
SP A++ IR + G++ EA +FE M G +P+ + ++ LC ++E +
Sbjct: 279 SPCAITYNTLIRGFCKLGQLKEASEIFEFM-IERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 225 ELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGEL 284
+L + K E P+ + I C+ G + A+EI M K P N+L+G L
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Query: 285 CSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAV---------FNSGL 335
C+ KG +++ + L+ M +S P V + A+ + L
Sbjct: 398 CA----KGDLDEA---------SKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444
Query: 336 LPSTFVVVKL-----------MSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKAL 384
+V KL ++ + G +A++L + + + K+ + Y ++
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504
Query: 385 CDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDN 444
C + A L +M L+P + YN ++S LC G+LD A +FE M + PD
Sbjct: 505 CKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDV 564
Query: 445 LTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERK 504
+++ +I K + K A LL+ M G P+L TY+ + N + D + K
Sbjct: 565 VSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDK 624
Query: 505 LENHQLQ----------KLC-KLGQLDAAYEKAKSMLEKGIHLSAYARDT-FEHVFQKNG 552
+ + + K C G+ D E K +++K I L T +++ +
Sbjct: 625 MVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSA 684
Query: 553 KLKIARQLLETTRRVQEPEE 572
+ +A++LL T +E ++
Sbjct: 685 NMDLAKRLLRVTDDKEERDK 704
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 183/423 (43%), Gaps = 57/423 (13%)
Query: 143 LGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEM---ETVFG 199
LGR M L++ + K + + I I L + R+ EAL +FE+M T G
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDG 363
Query: 200 --CKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES---PD--TYSCGNTIVGFCRL 252
K D++ FN ++ LCK +E EL +R+ K+E P+ TY+C I G+CR
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM--KLEERCVPNAVTYNC--LIDGYCRA 419
Query: 253 GRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV------EKVRVRNTRRPC 306
G+L A E+ S+M + + P VN ++G +C +V EK V+
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479
Query: 307 TILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVE 366
L+ S ++ A+ + + +G P + L+S LC++ + +A++++ ++
Sbjct: 480 MTLIHACCSVSN-VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 367 ERKLTCVEEGYAIVMKALCD-----------------------------------HCQVE 391
E + Y +++ CD H E
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 392 EASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMN-KKRCLPDNLTYTAL 450
+ +M GL P + Y +VI C++G LD A+ +F+ M + P+ + Y L
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 451 IHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQL 510
I+A K+ N+ A L EM P ++TYN + L E + + LKL ++ H +
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEHLV 718
Query: 511 QKL 513
++
Sbjct: 719 NQI 721
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 184/457 (40%), Gaps = 47/457 (10%)
Query: 145 RRKLFDDMKCLLMTVASQKGKVSPKAMSIC--IRFLGRHGRIHEALSLFEEM---ETVFG 199
+ +L + K + + VSP ++ + I L ++ R + A + ++ +T
Sbjct: 234 KERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLE 293
Query: 200 CKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAAL 259
P FN +L L + +L L++ PD + G I C+ R+ AL
Sbjct: 294 APP----FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEAL 349
Query: 260 EIFSQM-----NKIGVLPTRSA-VNMLIGELCSLSEKKGSVEK-VRVRNTRRPCTILVPN 312
E+F QM + V+ S N LI LC + K + E VR++ R C VPN
Sbjct: 350 EVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEER-C---VPN 405
Query: 313 -------MGG--NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLR 363
+ G +G ++ A EV + + P+ V ++ +CR AV
Sbjct: 406 AVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFM 465
Query: 364 IVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLG 423
+E+ + Y ++ A C VE+A + +ML G P +Y ++IS LC +
Sbjct: 466 DMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVR 525
Query: 424 NLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN 483
A+ V E + + D L Y LI N + Y++L +M G P+ TYN
Sbjct: 526 RDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYN 585
Query: 484 LVDNLLREHDRSDLCLKLERKLENHQ--------------LQKLCKLGQLDAAYEKAKSM 529
+ + +H + +ER +E + + C +G+LD A + K M
Sbjct: 586 TLISFFGKHKDFE---SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Query: 530 -LEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTR 565
L ++ + + + F K G A L E +
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 148/338 (43%), Gaps = 9/338 (2%)
Query: 162 QKGKVSPKAM--SICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQS 219
+KGK+ + + I L ++ + +A LF +MET G KPD +N ++ LC
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK-GIKPDVFTYNPLISCLCNYGR 300
Query: 220 SEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIG-VLPTRSAVN 278
+ L + K +PD I F + G+L A +++ +M K P A N
Sbjct: 301 WSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYN 360
Query: 279 MLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQP-----AVEVFWAVFNS 333
LI C + +E R + R V G Q A VF + +
Sbjct: 361 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 420
Query: 334 GLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEA 393
G+ P L+ LC G E A+ + +++R + Y +++ALC +VE+
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 394 SNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHA 453
+LF + G+KP + Y +++S C G + A +F M + LP++ TY LI A
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Query: 454 HGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLRE 491
+ + + +L+ EM G+ + T+ LV N+L +
Sbjct: 541 RLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHD 578
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 163/385 (42%), Gaps = 44/385 (11%)
Query: 181 HG-RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDT 239
HG RI EA++L ++M + G +PD + F +++ L + + E + L R+ K PD
Sbjct: 157 HGNRISEAVALVDQMVEM-GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL 215
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRV 299
+ G I G C+ G AL + ++M K + N +I LC
Sbjct: 216 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKH---------- 265
Query: 300 RNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAV 359
+ A ++F + G+ P F L+S LC G+ +A
Sbjct: 266 --------------------MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305
Query: 360 KLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACG-LKPKLGVYNSVISM 418
+LL + E+ + + ++ A ++ EA L+ M+ P + YN++I
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365
Query: 419 LCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPE 478
C ++ M VF M+++ + + +TYT LIH + ++ A + +M+ G P+
Sbjct: 366 FCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD 425
Query: 479 LQTYNLVDNLLREHDRSDLCL-----------KLERKLENHQLQKLCKLGQLDAAYEKAK 527
+ TYN++ + L + + L KL+ ++ LCK G+++ ++
Sbjct: 426 IMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFC 485
Query: 528 SMLEKGIHLSAYARDTFEHVFQKNG 552
S+ KG+ + T F + G
Sbjct: 486 SLSLKGVKPNVVTYTTMMSGFCRKG 510
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 178/407 (43%), Gaps = 30/407 (7%)
Query: 183 RIHEALSLFEEM--ETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTY 240
++ +A+ LF +M F P + F+ +L + K + I L ++ + S + Y
Sbjct: 55 KLDDAIGLFGDMVKSRPF---PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 241 SCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCS---LSEKKGSVEKV 297
+ I FCR +L AL I +M K+G P+ +N L+ C +SE V+++
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 298 RVRNTRRPCTI----LVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLG 353
V +P T+ LV + ++ A + AV + + G P +++ LC+ G
Sbjct: 172 -VEMGYQPDTVTFTTLVHGLFQHNKASE-AVALVERMVVKGCQPDLVTYGAVINGLCKRG 229
Query: 354 QTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYN 413
+ + A+ LL +E+ K+ Y ++ LC + +++A +LF +M G+KP + YN
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289
Query: 414 SVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHA---HGKVKNWKVAYDLLMEM 470
+IS LC G A + M +K PD + + ALI A GK+ + YD +++
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK- 348
Query: 471 LGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQL-----------QKLCKLGQL 519
P++ YN + ++ R + +++ R++ L +
Sbjct: 349 -SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 520 DAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTRR 566
D A K M+ G+H + NG ++ A + E ++
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQK 454
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 156/387 (40%), Gaps = 45/387 (11%)
Query: 181 HG-RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDT 239
HG RI +A++L ++M + G +PD + F +++ L + E + L R+ + P+
Sbjct: 92 HGKRISDAVALVDQMVEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 150
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRV 299
+ G + G C+ G + A + ++M + N +I LC
Sbjct: 151 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH---------- 200
Query: 300 RNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAV 359
+ A+ +F + G+ P+ L+S LC G+ +A
Sbjct: 201 --------------------VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 360 KLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISML 419
+LL + E+K+ + ++ A + EA L M+ + P + YNS+I+
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 420 CTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPEL 479
C LD A +FE M K C PD TY LI K K + +L EM G + +
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 480 QTYN-LVDNLLREHDRSDLCLKLERKLENHQ-----------LQKLCKLGQLDAAYEKAK 527
TY L+ L + D D K+ +++ + L LC G+L+ A E
Sbjct: 361 VTYTTLIQGLFHDGD-CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 419
Query: 528 SMLEKGIHLSAYARDTFEHVFQKNGKL 554
M + I L Y T K GK+
Sbjct: 420 YMQKSEIKLDIYIYTTMIEGMCKAGKV 446
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 160/366 (43%), Gaps = 8/366 (2%)
Query: 132 DDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLF 191
D + + D L + + DD L + ++ + + S I L +GR +A L
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 192 EEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCR 251
+M P+ + FN ++ K+ E +L + + PD ++ + I GFC
Sbjct: 244 SDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Query: 252 LGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRR------P 305
RL A ++F M P N LI C + E R + R
Sbjct: 303 HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 362
Query: 306 CTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIV 365
T L+ + + G A +VF + + G+ P L+ LC G+ E+A+++ +
Sbjct: 363 YTTLIQGLF-HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 366 EERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNL 425
++ ++ Y +++ +C +V++ +LF + G+KP + YN++IS LC+ L
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 426 DHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLV 485
A + + M + LPD+ TY LI AH + + + +L+ EM ++ + T LV
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 541
Query: 486 DNLLRE 491
N+L +
Sbjct: 542 ANMLHD 547
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 143/302 (47%), Gaps = 9/302 (2%)
Query: 202 PDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEI 261
P FN +L + K + + I L ++ S + Y+ I FCR ++ AL +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 262 FSQMNKIGVLPTRSAVNMLIGELCS---LSEKKGSVEKVRVRNTRRPCTI----LVPNMG 314
+M K+G P+ ++ L+ C +S+ V+++ V RP TI L+ +
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM-VEMGYRPDTITFTTLIHGLF 126
Query: 315 GNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVE 374
++ A + AV + + G P+ +++ LC+ G + A LL +E K+
Sbjct: 127 LHNKASE-AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 375 EGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFEL 434
+ ++ +LC + V++A NLF M G++P + Y+S+IS LC+ G A +
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 435 MNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDR 494
M +K+ P+ +T+ ALI A K + A L +M+ P++ TYN + N HDR
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 495 SD 496
D
Sbjct: 306 LD 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 102/240 (42%), Gaps = 17/240 (7%)
Query: 336 LPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASN 395
LPS F KL+S + ++ + + + L ++ ++ Y I++ C Q+ A
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 396 LFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHA-- 453
L G+M+ G +P + +S+++ C + A+ + + M + PD +T+T LIH
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 454 -HGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLE------ 506
H K A L+ M+ G P L TY +V N L + DL L K+E
Sbjct: 127 LHNKASE---AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 183
Query: 507 -----NHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLL 561
N + LCK +D A K M KGI + + G+ A QLL
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 136/314 (43%), Gaps = 39/314 (12%)
Query: 180 RHGRIHEALSLFEEM--ETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESP 237
+ G++ EA L +EM +F PD + +N+++Y CK ++ A +F M SP
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIF---PDTVTYNSMIYGFCKHNRFDD----AKHMFDLMASP 430
Query: 238 DTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKV 297
D + I +CR R+ +++ ++++ G++ + N LI C +
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN-------- 482
Query: 298 RVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEE 357
+ A ++F + + G+ P T L+ C + EE
Sbjct: 483 ----------------------LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 358 AVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVIS 417
A++L +++ K+ Y I++ +C +V+EA +LF + G++P + YN +IS
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 418 MLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIP 477
C + A +F M PDN TY LI K + +L+ EM G+
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640
Query: 478 ELQTYNLVDNLLRE 491
+ T +V +L+ +
Sbjct: 641 DAFTIKMVADLITD 654
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 149/373 (39%), Gaps = 76/373 (20%)
Query: 186 EALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNT 245
EA++LF++M + G P + FN ++ LC + E L ++ K D + G
Sbjct: 209 EAVALFDQMVEI-GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267
Query: 246 IVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRP 305
+ G C++G +AL + S+M + + P + +I LC
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCK------------------- 308
Query: 306 CTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIV 365
G A +F + G+ P+ F ++ C G+ +A +LLR +
Sbjct: 309 -----------DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
Query: 366 EERKLT------------CVEEG-----------------------YAIVMKALCDHCQV 390
ER++ V+EG Y ++ C H +
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417
Query: 391 EEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTAL 450
++A ++F M + P + +N++I + C +D M + ++++ + + TY L
Sbjct: 418 DDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 451 IHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQL 510
IH +V N A DL EM+ G P+ T N++ E++ KLE LE ++
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE------KLEEALELFEV 527
Query: 511 QKLCKLGQLDAAY 523
++ K+ AY
Sbjct: 528 IQMSKIDLDTVAY 540
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 150/383 (39%), Gaps = 58/383 (15%)
Query: 187 ALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTI 246
+LS F ++ T G +PD + FN +L+ LC E+ I AL +F M
Sbjct: 160 SLSTFGKL-TKLGFQPDVVTFNTLLHGLCL----EDRISEALALFGYMVE---------- 204
Query: 247 VGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPC 306
GF A+ +F QM +IG+ P N LI LC
Sbjct: 205 TGFLE------AVALFDQMVEIGLTPVVITFNTLINGLCL-------------------- 238
Query: 307 TILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVE 366
G + A + + GL +++ +C++G T+ A+ LL +E
Sbjct: 239 ----------EGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 367 ERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLD 426
E + Y+ ++ LC +A LF ML G+ P + YN +I C+ G
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 427 HAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVD 486
A + M ++ PD LT+ ALI A K A L EML P+ TYN +
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 487 NLLREHDR-------SDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAY 539
+H+R DL + N + C+ ++D + + + +G+ +
Sbjct: 409 YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468
Query: 540 ARDTFEHVFQKNGKLKIARQLLE 562
+T H F + L A+ L +
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQ 491
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 157/371 (42%), Gaps = 43/371 (11%)
Query: 145 RRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDN 204
+ KL D+M L + K + +I I L R ++ EA +FE M+ G P+
Sbjct: 218 KEKLLDEMTSLGI-------KPNVYIYTIYILDLCRDNKMEEAEKMFELMKK-HGVLPNL 269
Query: 205 LVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQ 264
++ ++ CK + + L I P+ G + GFC+ L A +F
Sbjct: 270 YTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVH 329
Query: 265 MNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAV 324
M K GV P N LI C SG + AV
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHC------------------------------KSGNMLEAV 359
Query: 325 EVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKAL 384
+ + + L P F L++ LC Q EA +L + ++ ++ Y ++
Sbjct: 360 GLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGY 419
Query: 385 CDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDN 444
C +E+A +L M A G++P + ++++I C + ++ AMG++ M K +PD
Sbjct: 420 CKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDV 479
Query: 445 LTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN-LVDNLLREHDRSDLCLKLER 503
+TYTALI AH K N K A L +ML G P T+ LVD +E L + ++
Sbjct: 480 VTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKE---GRLSVAIDF 536
Query: 504 KLENHQLQKLC 514
EN+Q Q+ C
Sbjct: 537 YQENNQ-QRSC 546
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 168/441 (38%), Gaps = 65/441 (14%)
Query: 122 WAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRH 181
W +M D + + L RR+ FD + + S+ + + +
Sbjct: 153 WVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQ 212
Query: 182 GRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES----P 237
G + L +EM T G KP+ ++ + LC+ EE A ++F M+ P
Sbjct: 213 GLYSKKEKLLDEM-TSLGIKPNVYIYTIYILDLCRDNKMEE----AEKMFELMKKHGVLP 267
Query: 238 DTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKV 297
+ Y+ I G+C+ G + A ++ ++ +LP L+ C E
Sbjct: 268 NLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE-------- 319
Query: 298 RVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEE 357
+ A +F + G+ P+ +V L+ C+ G E
Sbjct: 320 ----------------------LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLE 357
Query: 358 AVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVIS 417
AV LL +E L+ Y I++ LC QV EA+ LF +M + P YNS+I
Sbjct: 358 AVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIH 417
Query: 418 MLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIP 477
C N++ A+ + M P+ +T++ LI + V++ K A L EM G +P
Sbjct: 418 GYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVP 477
Query: 478 ELQTYN-LVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHL 536
++ TY L+D +E + A MLE GIH
Sbjct: 478 DVVTYTALIDAHFKE-------------------------ANMKEALRLYSDMLEAGIHP 512
Query: 537 SAYARDTFEHVFQKNGKLKIA 557
+ + F K G+L +A
Sbjct: 513 NDHTFACLVDGFWKEGRLSVA 533
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 113/250 (45%), Gaps = 22/250 (8%)
Query: 180 RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES--- 236
+ G + EA+ L EME++ PD + ++ LC E+ + A R+F KM++
Sbjct: 351 KSGNMLEAVGLLSEMESL-NLSPDVFTYTILINGLC----IEDQVAEANRLFQKMKNERI 405
Query: 237 -PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVE 295
P + + + I G+C+ + AL++ S+M GV P + LI C++ + K ++
Sbjct: 406 FPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMG 465
Query: 296 KVRVRNTRRPCTILVPNMGGNSGAI---------QPAVEVFWAVFNSGLLPSTFVVVKLM 346
+ +VP++ + I + A+ ++ + +G+ P+ L+
Sbjct: 466 LYFEMTIKG----IVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLV 521
Query: 347 SELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLK 406
+ G+ A+ + +++ G+ +++ LC + + AS F M +CG+
Sbjct: 522 DGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGIT 581
Query: 407 PKLGVYNSVI 416
P + Y S++
Sbjct: 582 PDICSYVSML 591
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 136/336 (40%), Gaps = 58/336 (17%)
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAA 258
GC+PD + F ++ LC + + + L R+ + P G I G C++G +A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 259 LEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSG 318
L + S+M + + N +I LC K G + +N
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLC----KDG--HHIHAQN----------------- 97
Query: 319 AIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYA 378
+F + + G+ P ++ CR G+ +A +LLR + ER++ ++
Sbjct: 98 -------LFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFS 150
Query: 379 IVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKK 438
++ AL +V EA ++G ML G+ P YNS+I C L+ A + + M K
Sbjct: 151 ALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASK 210
Query: 439 RCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLC 498
C PD +T++ LI+ + K K ++ EM G + TY +
Sbjct: 211 SCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL------------- 257
Query: 499 LKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGI 534
+ C++G LDAA + M+ G+
Sbjct: 258 -----------IHGFCQVGDLDAAQDLLNVMISSGV 282
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 11/228 (4%)
Query: 345 LMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACG 404
+++ LC++G TE A+ LL +EE + Y ++ LC A NLF M G
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG 106
Query: 405 LKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAY 464
+ P + Y+ +I C G A + M +++ PD +T++ALI+A K A
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAE 166
Query: 465 DLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQ-----------LQKL 513
++ +ML G P TYN + + + DR + ++ + + +
Sbjct: 167 EIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGY 226
Query: 514 CKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLL 561
CK ++D E M +GI + T H F + G L A+ LL
Sbjct: 227 CKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 274
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 125/298 (41%), Gaps = 18/298 (6%)
Query: 182 GRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYS 241
GR+ +AL+L + M G +P + N LCK +E AL + KME +
Sbjct: 24 GRVLQALALVDRM-VEEGHQPYGTIING----LCKMGDTES----ALNLLSKMEETHIKA 74
Query: 242 ---CGNTIVG-FCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKV 297
N I+ C+ G A +F++M+ G+ P + +I C + + +
Sbjct: 75 HVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLL 134
Query: 298 RVRNTRRPCTILVP-----NMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRL 352
R R+ +V N G + A E++ + G+ P+T ++ C+
Sbjct: 135 RDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQ 194
Query: 353 GQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVY 412
+ +A ++L + + + ++ ++ C +V+ +F M G+ Y
Sbjct: 195 DRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTY 254
Query: 413 NSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEM 470
++I C +G+LD A + +M P+ +T+ +++ + K + A+ +L ++
Sbjct: 255 TTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 157/390 (40%), Gaps = 42/390 (10%)
Query: 183 RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSC 242
RI +A++L ++M + G KPD F +++ L + E + L ++ + PD +
Sbjct: 168 RISDAVALVDQMVEM-GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 243 GNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNT 302
G + G C+ G + AL + ++M + N +I LC
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH------------- 273
Query: 303 RRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLL 362
++ AV++F + G+ P+ L++ LC G+ +A +LL
Sbjct: 274 -----------------VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 363 RIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTL 422
+ E+K+ + ++ A ++ EA L M+ + P YN +I+ C
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Query: 423 GNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTY 482
LD A +F+ M K CLP+ TY LI+ K K + +L EM G + TY
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Query: 483 -NLVDNLLREHDRSDLCLKLERKLENHQ----------LQKLCKLGQLDAAYEKAKSMLE 531
++ + D + ++ + N L LC G+LD A K + +
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK 496
Query: 532 KGIHLSAYARDTFEHVFQKNGKLKIARQLL 561
+ L+ + +T K GK+ A L
Sbjct: 497 SEMELNIFIYNTMIEGMCKAGKVGEAWDLF 526
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 179/410 (43%), Gaps = 25/410 (6%)
Query: 183 RIHEALSLFEEM--ETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTY 240
++ +A+ LF +M F P + FN +L + K E I L ++ S D Y
Sbjct: 63 KVDDAVDLFGDMVKSRPF---PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLY 119
Query: 241 SCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC---SLSEKKGSVEKV 297
+ I FCR +L AL + ++M K+G P ++ L+ C +S+ V+++
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 298 RVRNTRRP----CTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLG 353
V +P T L+ + ++ A + AV + + G P +++ LC+ G
Sbjct: 180 -VEMGYKPDTFTFTTLIHGLFLHNKASE-AVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 354 QTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYN 413
+ A+ LL +E ++ + ++ +LC + VE A +LF M G++P + YN
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 414 SVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGL 473
S+I+ LC G A + M +K+ P+ +T+ ALI A K A L EM+
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 474 GWIPELQTYNLVDNLLREHDRSDLCLKLER-----------KLENHQLQKLCKLGQLDAA 522
P+ TYNL+ N H+R D ++ + + N + CK +++
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 523 YEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTRRVQEPEE 572
E + M ++G+ + T F + G A+ + + + P +
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTD 467
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 13/324 (4%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
I L +GR +A L M P+ + FN ++ K+ E +L + +
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEK-KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV 294
PDT + I GFC RL A ++F M LP N LI C + V
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGV 418
Query: 295 EKVR-------VRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMS 347
E R V NT TI+ +G A VF + ++ + L+
Sbjct: 419 ELFREMSQRGLVGNTVTYTTIIQGFF--QAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 348 ELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKP 407
LC G+ + A+ + + +++ ++ Y +++ +C +V EA +LF + +KP
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKP 533
Query: 408 KLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLL 467
+ YN++IS LC+ L A +F M + LP++ TY LI A+ + + + +L+
Sbjct: 534 DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELI 593
Query: 468 MEMLGLGWIPELQTYNLVDNLLRE 491
EM G++ + T +LV N+L +
Sbjct: 594 KEMRSSGFVGDASTISLVTNMLHD 617
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 183/440 (41%), Gaps = 34/440 (7%)
Query: 147 KLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLV 206
+ F L S+ K + + I + ++ ++S F EM G P +
Sbjct: 73 QFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEM-VDNGFVPGSNC 131
Query: 207 FNNVLYVLCKKQSSEETIELALRIFHKMESP---DTYSCGNTIVGFCRLGRLGAALEIFS 263
FN +L + S + F++ +S D YS G I G C G + + ++
Sbjct: 132 FNYLLTFVVGSSSFNQ----WWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLI 187
Query: 264 QMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVR----------VRNTRRPCTILVPNM 313
++ + G P LI C KKG +EK + + R T+L+ +
Sbjct: 188 ELTEFGFSPNVVIYTTLIDGCC----KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGL 243
Query: 314 GGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCV 373
N G + E++ + G+ P+ + +M++LC+ G+T++A ++ + ER ++C
Sbjct: 244 FKN-GVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCN 302
Query: 374 EEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFE 433
Y ++ LC ++ EA+ + +M + G+ P L YN++I C +G L A+ +
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 434 LMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHD 493
+ + P +TY L+ + + A ++ EM G P TY ++ + D
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 494 RSDLCLKLERKLENHQL-----------QKLCKLGQLDAAYEKAKSMLEKGIHLSAYARD 542
+ ++L +E L C GQ++ A KSM+EK + +
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482
Query: 543 TFEHVFQKNGKLKIARQLLE 562
T + K G A +LL+
Sbjct: 483 TMILGYCKEGSSYRALKLLK 502
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 160/386 (41%), Gaps = 41/386 (10%)
Query: 125 TQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRI 184
T+ GF + + + D ++ + K L + + + ++ I L ++G
Sbjct: 190 TEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVK 249
Query: 185 HEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCG- 243
+ ++E+M+ G P+ +N V+ LCK +++ A ++F +M SC
Sbjct: 250 KQGFEMYEKMQED-GVFPNLYTYNCVMNQLCKDGRTKD----AFQVFDEMRERGV-SCNI 303
Query: 244 ---NTIVG-FCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRV 299
NT++G CR +L A ++ QM G+ P N LI C +
Sbjct: 304 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV------------ 351
Query: 300 RNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAV 359
G + A+ + + + GL PS L+S CR G T A
Sbjct: 352 ------------------GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAA 393
Query: 360 KLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISML 419
K+++ +EER + + Y I++ +E+A L M GL P + Y+ +I
Sbjct: 394 KMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF 453
Query: 420 CTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPEL 479
C G ++ A +F+ M +K C P+ + Y +I + K + A LL EM P +
Sbjct: 454 CIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNV 513
Query: 480 QTYNLVDNLLREHDRSDLCLKLERKL 505
+Y + +L + +S +L K+
Sbjct: 514 ASYRYMIEVLCKERKSKEAERLVEKM 539
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 130/308 (42%), Gaps = 31/308 (10%)
Query: 178 LGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESP 237
L + GR +A +F+EM G + + +N ++ LC++ E ++ ++ +P
Sbjct: 278 LCKDGRTKDAFQVFDEMRER-GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 238 DTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKV 297
+ + I GFC +G+LG AL + + G+ P+ N+L+ C + G+ + V
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 298 RVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEE 357
+ R G+ PS L+ R E+
Sbjct: 397 KEMEER------------------------------GIKPSKVTYTILIDTFARSDNMEK 426
Query: 358 AVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVIS 417
A++L +EE L Y++++ C Q+ EAS LF M+ +P +YN++I
Sbjct: 427 AIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMIL 486
Query: 418 MLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIP 477
C G+ A+ + + M +K P+ +Y +I K + K A L+ +M+ G P
Sbjct: 487 GYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Query: 478 ELQTYNLV 485
+L+
Sbjct: 547 STSILSLI 554
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 128/578 (22%), Positives = 225/578 (38%), Gaps = 128/578 (22%)
Query: 115 KTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSI- 173
K L F+ ++GF+ S + + LG F+ M+ +L+ + G + + +
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81
Query: 174 CIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHK 233
++ GR G++ EA+++FE M+ + C+P +N ++ VL ++ ++ +R+ +
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMD-FYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR 140
Query: 234 MESPDTYSCGNTIVGFCRLGRLGAAL---------------------------------- 259
+PD YS + FC+ R AAL
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200
Query: 260 -EIFSQM------------NKI-----------------------GVLPTRSAVNMLIGE 283
E+F +M NK+ GVLP N+ I
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 284 LCSLSEKKGSVEKVR--VRNTRRPCTI----LVPNMGGNSGAIQPAVEVFWAVFNSGLLP 337
LC E G+V V + +P I L+ + NS Q A + N GL P
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNS-KFQEAEVYLGKMVNEGLEP 319
Query: 338 STFVVVKLMSELCRLGQTEEAVKLL----------------RIVE--------ERKLTCV 373
++ L++ C+ G + A +++ +++ R L
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALF 379
Query: 374 EEG-----------YAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTL 422
E Y ++K L + + EA+ L M GL P++ +N +++ LC +
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM 439
Query: 423 GNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTY 482
G + A G+ ++M K PD T+ LIH + + A ++L ML G P++ TY
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTY 499
Query: 483 N-LVDNLLREHDRSDLCLKLERKLE----------NHQLQKLCKLGQLDAAYEKAKSMLE 531
N L++ L + D+ + +E N L+ LC+ +LD A + M
Sbjct: 500 NSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKN 559
Query: 532 KGIHLSAYARDTFEHVFQKNGKLKIARQLLETTRRVQE 569
K ++ A T F KNG L A L R+++E
Sbjct: 560 KSVNPDAVTFGTLIDGFCKNGDLDGAYTLF---RKMEE 594
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 151/376 (40%), Gaps = 42/376 (11%)
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAA 258
G KPD + +NN++Y LCK +E ++ ++ PD+Y+ I G+C+ G + A
Sbjct: 281 GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA 340
Query: 259 LEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSG 318
I G +P + LI LC + G
Sbjct: 341 ERIVGDAVFNGFVPDQFTYRSLIDGLC------------------------------HEG 370
Query: 319 AIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYA 378
A+ +F G+ P+ + L+ L G EA +L + E+ L + +
Sbjct: 371 ETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFN 430
Query: 379 IVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKK 438
I++ LC V +A L M++ G P + +N +I T +++A+ + ++M
Sbjct: 431 ILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDN 490
Query: 439 RCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLC 498
PD TY +L++ K ++ + M+ G P L T+N++ L + + D
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEA 550
Query: 499 LKLERKLENHQ-----------LQKLCKLGQLDAAYEKAKSMLEK-GIHLSAYARDTFEH 546
L L +++N + CK G LD AY + M E + S + H
Sbjct: 551 LGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIH 610
Query: 547 VFQKNGKLKIARQLLE 562
F + + +A +L +
Sbjct: 611 AFTEKLNVTMAEKLFQ 626
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 127/322 (39%), Gaps = 34/322 (10%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
I+ L G I EA L EM G P+ FN ++ LCK + L + K
Sbjct: 398 IKGLSNQGMILEAAQLANEMSEK-GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV 294
PD ++ I G+ ++ ALEI M GV P N L+ LC S+
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK----- 511
Query: 295 EKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQ 354
+ +E + + G P+ F L+ LCR +
Sbjct: 512 -------------------------FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK 546
Query: 355 TEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRML-ACGLKPKLGVYN 413
+EA+ LL ++ + + + ++ C + ++ A LF +M A + YN
Sbjct: 547 LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYN 606
Query: 414 SVISMLCTLGNLDHAMGVFELMNKKRCL-PDNLTYTALIHAHGKVKNWKVAYDLLMEMLG 472
+I N+ A +F+ M RCL PD TY ++ K N + Y L+EM+
Sbjct: 607 IIIHAFTEKLNVTMAEKLFQEM-VDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME 665
Query: 473 LGWIPELQTYNLVDNLLREHDR 494
G+IP L T V N L DR
Sbjct: 666 NGFIPSLTTLGRVINCLCVEDR 687
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 118/293 (40%), Gaps = 14/293 (4%)
Query: 161 SQKGKVSP-KAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQS 219
S+KG + + +I + L + G + +A L + M + G PD FN +++ +
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK-GYFPDIFTFNILIHGYSTQLK 476
Query: 220 SEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNM 279
E +E+ + PD Y+ + + G C+ + +E + M + G P N+
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 280 LIGELC---SLSEKKGSVEKVRVRNTRRPCTILVPNMGG--NSGAIQPAVEVF----WAV 330
L+ LC L E G +E+++ ++ + G +G + A +F A
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Query: 331 FNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQV 390
S P+ +++ +E + E KL + + +R L Y +++ C V
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAE---KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNV 653
Query: 391 EEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPD 443
M+ G P L VI+ LC + A G+ M +K +P+
Sbjct: 654 NLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 165/379 (43%), Gaps = 32/379 (8%)
Query: 180 RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES--- 236
+ G++ A S + ME G +P+ + +NN++ C+ ++ ++LA IF +M
Sbjct: 461 KQGKVDAATSFLKMMEQK-GIEPNVVFYNNMMLAHCRMKN----MDLARSIFSEMLEKGL 515
Query: 237 -PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVE 295
P+ ++ I GF + A ++ +QMN N +I LC + + + E
Sbjct: 516 EPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKE 575
Query: 296 K----VRVRNTRRPCTILVPNMGG--NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSEL 349
++ + CT + G G AVE + + +G P+ L++
Sbjct: 576 MLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGF 635
Query: 350 CRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKL 409
C+ + + A+++ ++ +L Y ++ C ++ A LF + GL P +
Sbjct: 636 CKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNV 695
Query: 410 GVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLME 469
VYNS+IS LG +D A+ +++ M D TYT +I K N +A DL E
Sbjct: 696 SVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSE 755
Query: 470 MLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLC--------------K 515
+L LG +P+ + ++ N L + + LK + LE + + + +
Sbjct: 756 LLDLGIVPDEILHMVLVNGLSKKGQ---FLKASKMLEEMKKKDVTPNVLLYSTVIAGHHR 812
Query: 516 LGQLDAAYEKAKSMLEKGI 534
G L+ A+ MLEKGI
Sbjct: 813 EGNLNEAFRLHDEMLEKGI 831
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 175/408 (42%), Gaps = 71/408 (17%)
Query: 187 ALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES---PDTYSCG 243
AL L EM G + +V+ K+ + EE A+R+ +M P +
Sbjct: 293 ALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEE----AVRVMDEMVGFGIPMSVIAA 348
Query: 244 NTIV-GFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVE-KVRVRN 301
++V G+C+ LG AL++F++M + G+ P + ++++ C E + ++E +R+++
Sbjct: 349 TSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKS 408
Query: 302 TR-RPCTILVPNM-GGNSGAIQP--AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEE 357
R P ++LV M G A P A+E+F F S + F+ K+ C+ G+ +
Sbjct: 409 VRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFES-WIAHGFMCNKIFLLFCKQGKVDA 467
Query: 358 AVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVIS 417
A L+++E++ G++P + YN+++
Sbjct: 468 ATSFLKMMEQK-----------------------------------GIEPNVVFYNNMML 492
Query: 418 MLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIP 477
C + N+D A +F M +K P+N TY+ LI K K+ + A+D++ +M +
Sbjct: 493 AHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEA 552
Query: 478 ELQTYN-----------------LVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLD 520
YN ++ NL++E S C N + K+G D
Sbjct: 553 NEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSY-----NSIIDGFVKVGDTD 607
Query: 521 AAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTRRVQ 568
+A E + M E G + + + F K+ ++ +A ++ + ++
Sbjct: 608 SAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSME 655
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 160/416 (38%), Gaps = 67/416 (16%)
Query: 186 EALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALR-----------IFHKM 234
+AL LF ME G PD ++F+ ++ CK E+ IE +R + H M
Sbjct: 363 KALDLFNRMEEE-GLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTM 421
Query: 235 -------ESPDT----------------YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVL 271
ESP+ + C + FC+ G++ AA M + G+
Sbjct: 422 IQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIE 481
Query: 272 PTRSAVNMLIGELCSLS--EKKGSVEKVRVRNTRRP----CTILVPNMGGNSGAIQPAVE 325
P N ++ C + + S+ + P +IL+ N Q A +
Sbjct: 482 PNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDE-QNAWD 540
Query: 326 VFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLR-IVEERKLTCVEEGYAIVMKAL 384
V + S + + +++ LC++GQT +A ++L+ +++E++ + Y ++
Sbjct: 541 VINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGF 600
Query: 385 CDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDN 444
+ A + M G P + + S+I+ C +D A+ + M D
Sbjct: 601 VKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDL 660
Query: 445 LTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERK 504
Y ALI K + K AY L E+ LG +P + YN + + R
Sbjct: 661 PAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFR-------------- 706
Query: 505 LENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQL 560
LG++DAA + K M+ GI + T K+G + +A L
Sbjct: 707 ----------NLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDL 752
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 102/523 (19%), Positives = 204/523 (39%), Gaps = 83/523 (15%)
Query: 95 DLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFD-DMK 153
D +SN ++ + + L +N + + GF+ Y+ + R K D +
Sbjct: 131 DRASNLLVMFVSNNPTLIPNVMVNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVD 190
Query: 154 CLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYV 213
C + V + P ++ + L R I EA ++ +M + G DN+ ++
Sbjct: 191 CFGLMVDRKVVPFVPYVNNV-LSSLVRSNLIDEAKEIYNKM-VLIGVAGDNVTTQLLMRA 248
Query: 214 LCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQM-NKIGVLP 272
+++ EE +++ R+ + PD + C+ L AL++ +M K+GV
Sbjct: 249 SLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPA 308
Query: 273 TRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFN 332
++ +I K+G++E+ AV V +
Sbjct: 309 SQETYTSVIVAFV----KEGNMEE--------------------------AVRVMDEMVG 338
Query: 333 SGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEE 392
G+ S L++ C+ + +A+ L +EE L + ++++++ C + ++E+
Sbjct: 339 FGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEK 398
Query: 393 ASNLFGRMLACGLKPK--------------------LGVYNS--------------VISM 418
A + RM + + P L ++N + +
Sbjct: 399 AIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLL 458
Query: 419 LCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPE 478
C G +D A ++M +K P+ + Y ++ AH ++KN +A + EML G P
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPN 518
Query: 479 LQTYN-LVDNLLREHDRSDLC----------LKLERKLENHQLQKLCKLGQLDAAYEKAK 527
TY+ L+D + D + + + N + LCK+GQ A E +
Sbjct: 519 NFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578
Query: 528 SML-EKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTRRVQE 569
+++ EK +S + ++ F K G A +ET R + E
Sbjct: 579 NLIKEKRYSMSCTSYNSIIDGFVKVGDTDSA---VETYREMSE 618
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 127/290 (43%), Gaps = 8/290 (2%)
Query: 203 DNLVFNNVLYVLCK-KQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEI 261
+ +++N ++ LCK Q+S+ L I K S S + I GF ++G +A+E
Sbjct: 553 NEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVET 612
Query: 262 FSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGG------ 315
+ +M++ G P LI C + ++E + + +P G
Sbjct: 613 YREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSME-LKLDLPAYGALIDGFC 671
Query: 316 NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEE 375
++ A +F + GL+P+ V L+S LG+ + A+ L + + ++C
Sbjct: 672 KKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLF 731
Query: 376 GYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELM 435
Y ++ L + AS+L+ +L G+ P ++ +++ L G A + E M
Sbjct: 732 TYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEM 791
Query: 436 NKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLV 485
KK P+ L Y+ +I H + N A+ L EML G + + +NL+
Sbjct: 792 KKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLL 841
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 159/383 (41%), Gaps = 15/383 (3%)
Query: 80 PGDTAIDHVLDRYKGDLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYM 139
P D ++H L Y +SSN V +VL ++LG FF WA F +
Sbjct: 51 PKDD-LEHTLVAYSPRVSSNLVEQVLKRCKNLG-FPAHRFFLWARRIPDFAHSLESYHIL 108
Query: 140 ADFLGRRKLFDDMKCLLMTVASQKG-KVSPKAMSICIRFLGRHGRIHEALSLFEEMETVF 198
+ LG K F + L+ ++S K I R R EA F M F
Sbjct: 109 VEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRM-VEF 167
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIEL--ALRIFHKMESPDTYSCGNTIVGFCRLGRLG 256
G KP + +L+ LC K+ E + F + S TYS + G+ R+
Sbjct: 168 GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSI--LVRGWARIRDAS 225
Query: 257 AALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVR------VRNTRRPCTILV 310
A ++F +M + + A N L+ LC + G + + ++ I +
Sbjct: 226 GARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFI 285
Query: 311 PNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKL 370
+ ++G + A +V + L+P+ + ++ LC+ + ++A LL + ++
Sbjct: 286 -HAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGA 344
Query: 371 TCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMG 430
Y +M CDHC+V A+ L RM P YN V+ +L +G D A
Sbjct: 345 NPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATE 404
Query: 431 VFELMNKKRCLPDNLTYTALIHA 453
++E M++++ P TYT +IH
Sbjct: 405 IWEGMSERKFYPTVATYTVMIHG 427
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 30/257 (11%)
Query: 325 EVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKAL 384
+VFW VF + + L SE CR R+VE CV++ ++ +L
Sbjct: 139 KVFWIVFRA------YSRANLPSEACR--------AFNRMVEFGIKPCVDD-LDQLLHSL 183
Query: 385 CDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDN 444
CD V A FG+ G+ P Y+ ++ + + A VF+ M ++ C+ D
Sbjct: 184 CDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDL 243
Query: 445 LTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDN-------------LLRE 491
L Y AL+ A K + Y + EM LG P+ ++ + + +L
Sbjct: 244 LAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDR 303
Query: 492 HDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKN 551
R DL + NH ++ LCK ++D AY M++KG + + ++ +
Sbjct: 304 MKRYDLVPNV--YTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDH 361
Query: 552 GKLKIARQLLETTRRVQ 568
++ A +LL R +
Sbjct: 362 CEVNRATKLLSRMDRTK 378
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 178/411 (43%), Gaps = 57/411 (13%)
Query: 143 LGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEM---ETVFG 199
LGR M L++ + K + + I I L + R+ EAL +FE+M T G
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDG 363
Query: 200 --CKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKME---SPD--TYSCGNTIVGFCRL 252
K D++ FN ++ LCK +E EL +R+ K+E +P+ TY+C I G+CR
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM--KLEERCAPNAVTYNC--LIDGYCRA 419
Query: 253 GRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV------EKVRVRNTRRPC 306
G+L A E+ S+M + + P VN ++G +C +V EK V+
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479
Query: 307 TILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVE 366
L+ S ++ A+ + + +G P + L+S LC++ + +A++++ ++
Sbjct: 480 MTLIHACCSVSN-VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 367 ERKLTCVEEGYAIVMKALCD-----------------------------------HCQVE 391
E + Y +++ CD H E
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 392 EASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMN-KKRCLPDNLTYTAL 450
+ +M GL P + Y +VI C++G LD A+ +F+ M + P+ + Y L
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 451 IHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKL 501
I+A K+ N+ A L EM P ++TYN + L E + + LKL
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKL 709
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 180/425 (42%), Gaps = 36/425 (8%)
Query: 172 SICIRFLGRHGRIHEALSLFEEM---ETVFGCKPDNLVFNNVLYVLCKKQ--SSEETIEL 226
++ + L R+G + +A + +EM E+VF P+ + + VL+ + K + + E+ I L
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVF--PPNRITADIVLHEVWKGRLLTEEKIIAL 246
Query: 227 ALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIG---- 282
R SP++ I C+ R AA +I S + K N L+
Sbjct: 247 ISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGR 306
Query: 283 --ELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTF 340
++ +++ +++V++R IL+ N S + A+EVF + G
Sbjct: 307 NMDISRMNDLVLKMDEVKIRPDVVTLGILI-NTLCKSRRVDEALEVFEKM--RGKRTDDG 363
Query: 341 VVVK--------LMSELCRLGQTEEAVKLL-RIVEERKLTCVEEGYAIVMKALCDHCQVE 391
V+K L+ LC++G+ +EA +LL R+ E + Y ++ C ++E
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLE 423
Query: 392 EASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALI 451
A + RM +KP + N+++ +C L+ A+ F M K+ + +TY LI
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLI 483
Query: 452 HAHGKVKNWKVAYDLLMEMLGLGWIPELQT-YNLVDNLL---REHDRSDLCLKLERK--- 504
HA V N + A +ML G P+ + Y L+ L R+HD + KL+
Sbjct: 484 HACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 505 ----LENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQL 560
N + C + YE M ++G + +T F K+ + ++
Sbjct: 544 LDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERM 603
Query: 561 LETTR 565
+E R
Sbjct: 604 MEQMR 608
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 156/414 (37%), Gaps = 64/414 (15%)
Query: 178 LGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES- 236
LGR+ I L +M+ V +PD + ++ LCK + +E AL +F KM
Sbjct: 304 LGRNMDISRMNDLVLKMDEV-KIRPDVVTLGILINTLCKSRRVDE----ALEVFEKMRGK 358
Query: 237 ---------PDTYSCGNTIVGFCRLGRLGAALEIFSQMN-KIGVLPTRSAVNMLIGELCS 286
D+ I G C++GRL A E+ +M + P N LI C
Sbjct: 359 RTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYC- 417
Query: 287 LSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLM 346
+G ++ A EV + + P+ V ++
Sbjct: 418 -----------------------------RAGKLETAKEVVSRMKEDEIKPNVVTVNTIV 448
Query: 347 SELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLK 406
+CR AV +E+ + Y ++ A C VE+A + +ML G
Sbjct: 449 GGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCS 508
Query: 407 PKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDL 466
P +Y ++IS LC + A+ V E + + D L Y LI N + Y++
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEM 568
Query: 467 LMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQ--------------LQK 512
L +M G P+ TYN + + +H + +ER +E + +
Sbjct: 569 LTDMEKEGKKPDSITYNTLISFFGKHKDFE---SVERMMEQMREDGLDPTVTTYGAVIDA 625
Query: 513 LCKLGQLDAAYEKAKSM-LEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTR 565
C +G+LD A + K M L ++ + + + F K G A L E +
Sbjct: 626 YCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 177/411 (43%), Gaps = 57/411 (13%)
Query: 143 LGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEM---ETVFG 199
LGR M L++ + K + + I I L + R+ EAL +FE+M T G
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDG 363
Query: 200 --CKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES---PD--TYSCGNTIVGFCRL 252
K D++ FN ++ LCK +E EL +R+ K+E P+ TY+C I G+CR
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM--KLEERCVPNAVTYNC--LIDGYCRA 419
Query: 253 GRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV------EKVRVRNTRRPC 306
G+L A E+ S+M + + P VN ++G +C +V EK V+
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479
Query: 307 TILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVE 366
L+ S ++ A+ + + +G P + L+S LC++ + +A++++ ++
Sbjct: 480 MTLIHACCSVSN-VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 367 ERKLTCVEEGYAIVMKALCD-----------------------------------HCQVE 391
E + Y +++ CD H E
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 392 EASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMN-KKRCLPDNLTYTAL 450
+ +M GL P + Y +VI C++G LD A+ +F+ M + P+ + Y L
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 451 IHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKL 501
I+A K+ N+ A L EM P ++TYN + L E + + LKL
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKL 709
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 184/457 (40%), Gaps = 47/457 (10%)
Query: 145 RRKLFDDMKCLLMTVASQKGKVSPKAMSIC--IRFLGRHGRIHEALSLFEEM---ETVFG 199
+ +L + K + + VSP ++ + I L ++ R + A + ++ +T
Sbjct: 234 KERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLE 293
Query: 200 CKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAAL 259
P FN +L L + +L L++ PD + G I C+ R+ AL
Sbjct: 294 APP----FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEAL 349
Query: 260 EIFSQM-----NKIGVLPTRSA-VNMLIGELCSLSEKKGSVEK-VRVRNTRRPCTILVPN 312
E+F QM + V+ S N LI LC + K + E VR++ R C VPN
Sbjct: 350 EVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEER-C---VPN 405
Query: 313 -------MGG--NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLR 363
+ G +G ++ A EV + + P+ V ++ +CR AV
Sbjct: 406 AVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFM 465
Query: 364 IVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLG 423
+E+ + Y ++ A C VE+A + +ML G P +Y ++IS LC +
Sbjct: 466 DMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVR 525
Query: 424 NLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN 483
A+ V E + + D L Y LI N + Y++L +M G P+ TYN
Sbjct: 526 RDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYN 585
Query: 484 LVDNLLREHDRSDLCLKLERKLENHQ--------------LQKLCKLGQLDAAYEKAKSM 529
+ + +H + +ER +E + + C +G+LD A + K M
Sbjct: 586 TLISFFGKHKDFE---SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Query: 530 -LEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTR 565
L ++ + + + F K G A L E +
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 138/352 (39%), Gaps = 37/352 (10%)
Query: 162 QKGKVSPKAMSICIRFLG--RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQS 219
++ ++ P +++ G RH ++ A+ F +ME G K + + + +++ C +
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKE-GVKGNVVTYMTLIHACCSVSN 491
Query: 220 SEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNM 279
E+ + ++ SPD I G C++ R A+ + ++ + G A NM
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 280 LIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPST 339
LIG C K + EKV E+ + G P +
Sbjct: 552 LIGLFCD----KNNAEKV--------------------------YEMLTDMEKEGKKPDS 581
Query: 340 FVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGR 399
L+S + E +++ + E L Y V+ A C +++EA LF
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 400 M-LACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVK 458
M L + P +YN +I+ LGN A+ + E M K P+ TY AL +
Sbjct: 642 MGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKT 701
Query: 459 NWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQL 510
+ L+ EM+ P T + L+ SD +KL + ++ + +
Sbjct: 702 QGETLLKLMDEMVEQSCEPNQITMEI---LMERLSGSDELVKLRKFMQGYSV 750
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 167/385 (43%), Gaps = 17/385 (4%)
Query: 120 FSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSI------ 173
F+WA T F+ D +M+ L FDD+ LL VA+ S S
Sbjct: 100 FNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPELEPI 159
Query: 174 ---CIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRI 230
I R ++ AL F+ M+ + KP+ V+N V+ K ++ + R+
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 231 FHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLI-GELCSLSE 289
+ PD + I G+CR + AL++F +M + G P + N LI G L S
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 290 KKG---SVEKVRV--RNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVK 344
++G + E + + R + C ILV + G + A + + N +LPS F
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLC-REGRVDDACGLVLDLLNKRVLPSEFDYGS 338
Query: 345 LMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACG 404
L+ +LC + A++++ + ++ T +++ L + E+AS +M+ G
Sbjct: 339 LVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAG 398
Query: 405 LKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAY 464
+ P +N ++ LC+ + A + L + K PD TY L+ K K
Sbjct: 399 ILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGE 458
Query: 465 DLLMEMLGLGWIPELQTYN-LVDNL 488
L+ EML +P++ TYN L+D L
Sbjct: 459 VLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 112/273 (41%), Gaps = 8/273 (2%)
Query: 159 VASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQ 218
+ ++ K +I I R + AL LF EM+ GC+P+ + FN ++
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEK-GCEPNVVSFNTLIRGFLSSG 277
Query: 219 SSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVN 278
EE +++A + +C + G CR GR+ A + + VLP+
Sbjct: 278 KIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYG 337
Query: 279 MLIGELCSLSEKKGSVEKVR--VRNTRRPC----TILVPNMGGNSGAIQPAVEVFWAVFN 332
L+ +LC ++ ++E + + + PC T LV + SG + A + N
Sbjct: 338 SLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLR-KSGRTEKASGFMEKMMN 396
Query: 333 SGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEE 392
+G+LP + L+ +LC + +A +L + + E Y +++ + +E
Sbjct: 397 AGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKE 456
Query: 393 ASNLFGRMLACGLKPKLGVYNSVISMLCTLGNL 425
L ML + P + YN ++ L G
Sbjct: 457 GEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKF 489
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 169/367 (46%), Gaps = 12/367 (3%)
Query: 147 KLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLV 206
++F+DMK + + +I IR +GR G+ EA+ LF EM T G + +
Sbjct: 256 QVFEDMK-------KRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITE-GLTLNVVG 307
Query: 207 FNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCG---NTIVGFCRLGRLGAALEIFS 263
+N ++ VL K + ++ I++ R+ P+ Y+ N +V +L RL +EI
Sbjct: 308 YNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISK 367
Query: 264 QMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPA 323
+ G+ +G + + V+ R ++ ++ G I+ A
Sbjct: 368 RYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIE-A 426
Query: 324 VEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKA 383
+E+ + G++ T + + S L +L Q L +++ + Y I++ +
Sbjct: 427 IEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIAS 486
Query: 384 LCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPD 443
+V+EA N+F + KP + YNS+I+ L G++D A F+ M +K PD
Sbjct: 487 FGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPD 546
Query: 444 NLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLER 503
+TY+ L+ GK + ++AY L EML G P + TYN++ + L ++ R+ + L
Sbjct: 547 VVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYS 606
Query: 504 KLENHQL 510
K++ L
Sbjct: 607 KMKQQGL 613
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 11/212 (5%)
Query: 352 LGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGV 411
L + E+A ++ +++R E Y I+++ + + +EA LF M+ GL +
Sbjct: 248 LAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVG 307
Query: 412 YNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIH---AHGKVKNWKVAYDLLM 468
YN+++ +L +D A+ VF M + C P+ TY+ L++ A G++ ++
Sbjct: 308 YNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISK 367
Query: 469 EMLGLGWIPEL-QTYNLVDNLLREH----DRSDLCLKLERKLENHQLQKLCKLGQLDAAY 523
+ G L +T + + ++ H D +K ER L+ LC G+ A
Sbjct: 368 RYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAI 427
Query: 524 EKAKSMLEKGIHLSAYARDTFEHVFQKNGKLK 555
E + EKG+ +T VF GKLK
Sbjct: 428 EMLSKIHEKGVVTDTMMYNT---VFSALGKLK 456
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 167/373 (44%), Gaps = 46/373 (12%)
Query: 207 FNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMN 266
++ V+ LC++Q E+ + K P S + + G+C+LG + A F +
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 267 KIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTR--RPCTILVPNMGGNS---GAIQ 321
K G++P+ + N+LI LC + ++E N P ++ + G I
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 322 PAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERK------LTCVEE 375
A EV + + GL P L+ C+LG + + LL+ + R + C
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC--- 366
Query: 376 GYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELM 435
++++ LC +++EA +LF +M A GL P L Y+ VI LC LG D A+ +++ M
Sbjct: 367 --SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 436 NKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGL---GWIPELQTYNLVDNLLREH 492
KR LP++ T+ AL +LGL G + L+ +L+D+L+
Sbjct: 425 CDKRILPNSRTHGAL-------------------LLGLCQKGML--LEARSLLDSLISSG 463
Query: 493 DRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNG 552
+ D+ L N + K G ++ A E K ++E GI S ++ + + K
Sbjct: 464 ETLDIVLY------NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQ 517
Query: 553 KLKIARQLLETTR 565
+ AR++L+ +
Sbjct: 518 NIAEARKILDVIK 530
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 131/331 (39%), Gaps = 42/331 (12%)
Query: 162 QKGKVSPKAMSICIRFLGRH--GRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQS 219
K V P +++ I G H G I A + +M G PD + + +L Q
Sbjct: 284 NKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK-GLSPDVITYT----ILLCGQC 338
Query: 220 SEETIELALRIFHKM-----ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTR 274
I++ L + M E C + G C+ GR+ AL +F+QM G+ P
Sbjct: 339 QLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDL 398
Query: 275 SAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSG 334
A +++I LC L G A+ ++ + +
Sbjct: 399 VAYSIVIHGLCKL------------------------------GKFDMALWLYDEMCDKR 428
Query: 335 LLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEAS 394
+LP++ L+ LC+ G EA LL + T Y IV+ +EEA
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 395 NLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAH 454
LF ++ G+ P + +NS+I C N+ A + +++ P ++YT L+ A+
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548
Query: 455 GKVKNWKVAYDLLMEMLGLGWIPELQTYNLV 485
N K +L EM G P TY+++
Sbjct: 549 ANCGNTKSIDELRREMKAEGIPPTNVTYSVI 579
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 151/356 (42%), Gaps = 17/356 (4%)
Query: 139 MADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLG--RHGRIHEALSLFEEMET 196
+ D L R++ +D L T S+ + P +S G + G + A S F T
Sbjct: 193 VVDGLCRQQKLEDAVLFLRT--SEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFC---T 247
Query: 197 VFGCK--PDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGR 254
V C P N ++ LC S E +ELA + PD+ + GF LG
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307
Query: 255 LGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEK-------KGSVEKVRVRNTRRPCT 307
+ A E+ M G+ P +L+ C L K + + N+ PC+
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 308 ILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEE 367
+++ + +G I A+ +F + GL P ++ LC+LG+ + A+ L + +
Sbjct: 368 VMLSGLC-KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 368 RKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDH 427
+++ + ++ LC + EA +L +++ G + +YN VI G ++
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 428 AMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN 483
A+ +F+++ + P T+ +LI+ + K +N A +L + G P + +Y
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYT 542
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 169/426 (39%), Gaps = 108/426 (25%)
Query: 166 VSPKAMSICIRFLGR--HGRIHEALSLFEEMETVFGCKPDNLVFNNV-LYVLCKKQSSEE 222
+SP ++ I G+ G I L L ++M + G + ++++ +V L LCK +E
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR-GFELNSIIPCSVMLSGLCKTGRIDE 381
Query: 223 TIELALRIFHKME----SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVN 278
AL +F++M+ SPD + I G C+LG+ AL ++ +M +LP
Sbjct: 382 ----ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 279 MLIGELCSLSEKKGSVEKVR-----VRNTRRPCTILVPNM----GGNSGAIQPAVEVFWA 329
L+ LC +KG + + R + ++ I++ N+ SG I+ A+E+F
Sbjct: 438 ALLLGLC----QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKV 493
Query: 330 VFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIV------------------------ 365
V +G+ PS L+ C+ EA K+L ++
Sbjct: 494 VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN 553
Query: 366 ----EERKLTCVEEG-------YAIVMKALC-----DHCQVEEASNLFGR-------MLA 402
+E + EG Y+++ K LC ++C +F + M +
Sbjct: 554 TKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMES 613
Query: 403 CGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKR---------CLPDNL-------- 445
G+ P YN++I LC + +L A E+M + L D+L
Sbjct: 614 EGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRK 673
Query: 446 ------------------TYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDN 487
YT LI AH + ++A L ++L G+ ++ Y+ V N
Sbjct: 674 ADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN 733
Query: 488 -LLREH 492
L R H
Sbjct: 734 RLCRRH 739
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 134/312 (42%), Gaps = 39/312 (12%)
Query: 180 RHGRIHEALSLFEEM--ETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESP 237
+ G++ EA L +EM +F PD + +N+++Y CK ++ A +F M SP
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIF---PDTVTYNSMIYGFCKHNRFDD----AKHMFDLMASP 430
Query: 238 DTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKV 297
D + I +CR R+ +++ ++++ G++ + N LI C +
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN-------- 482
Query: 298 RVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEE 357
+ A ++F + + G+ P T L+ C + EE
Sbjct: 483 ----------------------LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 358 AVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVIS 417
A++L +++ K+ Y I++ +C +V+EA +LF + G++P + YN +IS
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 418 MLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIP 477
C + A +F M PDN TY LI K + +L+ EM G+
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640
Query: 478 ELQTYNLVDNLL 489
+ T + + ++
Sbjct: 641 DAFTIKMAEEII 652
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 149/373 (39%), Gaps = 76/373 (20%)
Query: 186 EALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNT 245
EA++LF++M + G P + FN ++ LC + E L ++ K D + G
Sbjct: 209 EAVALFDQMVEI-GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267
Query: 246 IVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRP 305
+ G C++G +AL + S+M + + P + +I LC
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCK------------------- 308
Query: 306 CTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIV 365
G A +F + G+ P+ F ++ C G+ +A +LLR +
Sbjct: 309 -----------DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
Query: 366 EERKLT------------CVEEG-----------------------YAIVMKALCDHCQV 390
ER++ V+EG Y ++ C H +
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417
Query: 391 EEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTAL 450
++A ++F M + P + +N++I + C +D M + ++++ + + TY L
Sbjct: 418 DDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 451 IHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQL 510
IH +V N A DL EM+ G P+ T N++ E++ KLE LE ++
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE------KLEEALELFEV 527
Query: 511 QKLCKLGQLDAAY 523
++ K+ AY
Sbjct: 528 IQMSKIDLDTVAY 540
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 150/383 (39%), Gaps = 58/383 (15%)
Query: 187 ALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTI 246
+LS F ++ T G +PD + FN +L+ LC E+ I AL +F M
Sbjct: 160 SLSTFGKL-TKLGFQPDVVTFNTLLHGLCL----EDRISEALALFGYMVE---------- 204
Query: 247 VGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPC 306
GF A+ +F QM +IG+ P N LI LC
Sbjct: 205 TGFLE------AVALFDQMVEIGLTPVVITFNTLINGLCL-------------------- 238
Query: 307 TILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVE 366
G + A + + GL +++ +C++G T+ A+ LL +E
Sbjct: 239 ----------EGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 367 ERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLD 426
E + Y+ ++ LC +A LF ML G+ P + YN +I C+ G
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 427 HAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVD 486
A + M ++ PD LT+ ALI A K A L EML P+ TYN +
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 487 NLLREHDR-------SDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAY 539
+H+R DL + N + C+ ++D + + + +G+ +
Sbjct: 409 YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468
Query: 540 ARDTFEHVFQKNGKLKIARQLLE 562
+T H F + L A+ L +
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQ 491
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 167/373 (44%), Gaps = 46/373 (12%)
Query: 207 FNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMN 266
++ V+ LC++Q E+ + K P S + + G+C+LG + A F +
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 267 KIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTR--RPCTILVPNMGGNS---GAIQ 321
K G++P+ + N+LI LC + ++E N P ++ + G I
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 322 PAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERK------LTCVEE 375
A EV + + GL P L+ C+LG + + LL+ + R + C
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC--- 366
Query: 376 GYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELM 435
++++ LC +++EA +LF +M A GL P L Y+ VI LC LG D A+ +++ M
Sbjct: 367 --SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 436 NKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGL---GWIPELQTYNLVDNLLREH 492
KR LP++ T+ AL +LGL G + L+ +L+D+L+
Sbjct: 425 CDKRILPNSRTHGAL-------------------LLGLCQKGML--LEARSLLDSLISSG 463
Query: 493 DRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNG 552
+ D+ L N + K G ++ A E K ++E GI S ++ + + K
Sbjct: 464 ETLDIVLY------NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQ 517
Query: 553 KLKIARQLLETTR 565
+ AR++L+ +
Sbjct: 518 NIAEARKILDVIK 530
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 131/331 (39%), Gaps = 42/331 (12%)
Query: 162 QKGKVSPKAMSICIRFLGRH--GRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQS 219
K V P +++ I G H G I A + +M G PD + + +L Q
Sbjct: 284 NKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK-GLSPDVITYT----ILLCGQC 338
Query: 220 SEETIELALRIFHKM-----ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTR 274
I++ L + M E C + G C+ GR+ AL +F+QM G+ P
Sbjct: 339 QLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDL 398
Query: 275 SAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSG 334
A +++I LC L G A+ ++ + +
Sbjct: 399 VAYSIVIHGLCKL------------------------------GKFDMALWLYDEMCDKR 428
Query: 335 LLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEAS 394
+LP++ L+ LC+ G EA LL + T Y IV+ +EEA
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 395 NLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAH 454
LF ++ G+ P + +NS+I C N+ A + +++ P ++YT L+ A+
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548
Query: 455 GKVKNWKVAYDLLMEMLGLGWIPELQTYNLV 485
N K +L EM G P TY+++
Sbjct: 549 ANCGNTKSIDELRREMKAEGIPPTNVTYSVI 579
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 151/355 (42%), Gaps = 17/355 (4%)
Query: 139 MADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLG--RHGRIHEALSLFEEMET 196
+ D L R++ +D L T S+ + P +S G + G + A S F T
Sbjct: 193 VVDGLCRQQKLEDAVLFLRT--SEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFC---T 247
Query: 197 VFGCK--PDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGR 254
V C P N ++ LC S E +ELA + PD+ + GF LG
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307
Query: 255 LGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEK-------KGSVEKVRVRNTRRPCT 307
+ A E+ M G+ P +L+ C L K + + N+ PC+
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 308 ILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEE 367
+++ + +G I A+ +F + GL P ++ LC+LG+ + A+ L + +
Sbjct: 368 VMLSGLC-KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 368 RKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDH 427
+++ + ++ LC + EA +L +++ G + +YN VI G ++
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 428 AMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTY 482
A+ +F+++ + P T+ +LI+ + K +N A +L + G P + +Y
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 541
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 169/426 (39%), Gaps = 108/426 (25%)
Query: 166 VSPKAMSICIRFLGR--HGRIHEALSLFEEMETVFGCKPDNLVFNNV-LYVLCKKQSSEE 222
+SP ++ I G+ G I L L ++M + G + ++++ +V L LCK +E
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR-GFELNSIIPCSVMLSGLCKTGRIDE 381
Query: 223 TIELALRIFHKME----SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVN 278
AL +F++M+ SPD + I G C+LG+ AL ++ +M +LP
Sbjct: 382 ----ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 279 MLIGELCSLSEKKGSVEKVR-----VRNTRRPCTILVPNM----GGNSGAIQPAVEVFWA 329
L+ LC +KG + + R + ++ I++ N+ SG I+ A+E+F
Sbjct: 438 ALLLGLC----QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKV 493
Query: 330 VFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIV------------------------ 365
V +G+ PS L+ C+ EA K+L ++
Sbjct: 494 VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN 553
Query: 366 ----EERKLTCVEEG-------YAIVMKALC-----DHCQVEEASNLFGR-------MLA 402
+E + EG Y+++ K LC ++C +F + M +
Sbjct: 554 TKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMES 613
Query: 403 CGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKR---------CLPDNL-------- 445
G+ P YN++I LC + +L A E+M + L D+L
Sbjct: 614 EGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRK 673
Query: 446 ------------------TYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDN 487
YT LI AH + ++A L ++L G+ ++ Y+ V N
Sbjct: 674 ADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN 733
Query: 488 -LLREH 492
L R H
Sbjct: 734 RLCRRH 739
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 174/406 (42%), Gaps = 46/406 (11%)
Query: 180 RHGRIHEALSLFEEM--ETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKME-- 235
+ G++ EA S + M + + G V N L+ K +EE IF +M
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE-------IFREMRGK 621
Query: 236 --SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC---SLSEK 290
+PD +S G I GF +LG + A IF +M + G+ P NML+G C + +
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Query: 291 KGSVEKVRVR----NTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLM 346
K ++++ V+ N CTI+ + SG + A +F + GL+P +FV L+
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTII--DGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Query: 347 SELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGL- 405
CRL E A+ + ++ + ++ + + E + + R++
Sbjct: 740 DGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFD 798
Query: 406 ---KPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKV 462
KP YN +I LC GNL+ A +F M +P +TYT+L++ + K+
Sbjct: 799 RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAE 858
Query: 463 AYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAA 522
+ + E + G P+ Y+++ N + + L L +D
Sbjct: 859 MFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVL-----------------VDQM 901
Query: 523 YEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTRRVQ 568
+ AK+ ++ G LS F K G++++A +++E R+Q
Sbjct: 902 F--AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQ 945
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 159/378 (42%), Gaps = 38/378 (10%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
I+ ++ R +A+ + +EM+ G PD +N+++ L K + +E + +
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQ-GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV 294
P+ ++ G I G+ +A + +M + GVLP + LI E C KKG V
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC----KKGKV 573
Query: 295 EKV----------RVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVK 344
+ + + T+L+ + N + A E+F + G+ P F
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKND-KVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 345 LMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACG 404
L++ +LG ++A + + E LT Y +++ C ++E+A L M G
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 405 LKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAY 464
L P Y ++I C G+L A +F+ M K +PD+ YT L+ ++ + + A
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA- 751
Query: 465 DLLMEMLGL---GWIPELQTYNLVDNLLREHDRSDLCLKLERKL---------------E 506
+ + G G +N + N + + +++L ++ +L
Sbjct: 752 ---ITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY 808
Query: 507 NHQLQKLCKLGQLDAAYE 524
N + LCK G L+AA E
Sbjct: 809 NIMIDYLCKEGNLEAAKE 826
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 145/348 (41%), Gaps = 22/348 (6%)
Query: 237 PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC---SLSEKKGS 293
P Y+ I G C++ RL A + +M+ +GV ++LI L + KG
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGL 334
Query: 294 VEK-----VRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSE 348
V + + ++ C I V + G ++ A +F + SGL+P L+
Sbjct: 335 VHEMVSHGINIKPYMYDCCICVMS---KEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 349 LCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPK 408
CR + +LL +++R + Y V+K +C ++ A N+ M+A G +P
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 409 LGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLM 468
+ +Y ++I AM V + M ++ PD Y +LI K K A L+
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 469 EMLGLGWIPELQTYN-LVDNLLR--EHDRSDLCLKLERK---LENHQL-----QKLCKLG 517
EM+ G P TY + + E +D +K R+ L N L + CK G
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571
Query: 518 QLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTR 565
++ A +SM+++GI A + KN K+ A ++ R
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 165/418 (39%), Gaps = 54/418 (12%)
Query: 126 QMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIH 185
+G D+ + D L + + D K L+ + S + P CI + + G +
Sbjct: 305 SLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVME 364
Query: 186 EALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNT 245
+A +LF+ M G P + +++ C++++ + EL + + + Y+ G
Sbjct: 365 KAKALFDGM-IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 246 IVGFCRLG-----------------------------------RLGAALEIFSQMNKIGV 270
+ G C G R G A+ + +M + G+
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
Query: 271 LPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAV 330
P N LI LS+ K +++ R L PN I +E +
Sbjct: 484 APDIFCYNSLI---IGLSKAK-RMDEARSFLVEMVENGLKPNAFTYGAFISGYIEA--SE 537
Query: 331 FNS-----------GLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAI 379
F S G+LP+ + L++E C+ G+ EA R + ++ + + Y +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 380 VMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKR 439
+M L + +V++A +F M G+ P + Y +I+ LGN+ A +F+ M ++
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 440 CLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTY-NLVDNLLREHDRSD 496
P+ + Y L+ + + A +LL EM G P TY ++D + D ++
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE 715
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 102/477 (21%), Positives = 188/477 (39%), Gaps = 62/477 (12%)
Query: 95 DLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKC 154
+++ VL VL S + +K L+FF+W +Q V E D F +
Sbjct: 59 EINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQ-------KVTEQKLD------SFSFLAL 105
Query: 155 LLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVL 214
L S + KA+S+ R + R+ + E S F K D+ V +L+
Sbjct: 106 DLCNFGSFE-----KALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILF-- 158
Query: 215 CKKQSSEETIELALRIFHKMES----PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGV 270
++ IE A+ +F P C + R RL +++ M + V
Sbjct: 159 -DGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNV 217
Query: 271 LPTRSAVNMLIGELCSLSEKKGSVE--KVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFW 328
+ +MLI C + G+V+ K + T + N+ G A+++
Sbjct: 218 VFDVKTYHMLIIAHC----RAGNVQLGKDVLFKTEKEFRTATLNVDG-------ALKLKE 266
Query: 329 AVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHC 388
++ GL+P + L+ LC++ + E+A LL ++ ++ Y++++ L
Sbjct: 267 SMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGR 326
Query: 389 QVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYT 448
+ A L M++ G+ K +Y+ I ++ G ++ A +F+ M +P Y
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA 386
Query: 449 ALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENH 508
+LI + + KN + Y+LL+EM + TY V
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV----------------------- 423
Query: 509 QLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTR 565
++ +C G LD AY K M+ G + T F +N + A ++L+ +
Sbjct: 424 -VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 171/416 (41%), Gaps = 28/416 (6%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
+R L G++ AL L ++M G P + N++L LCK E+ L +
Sbjct: 128 MRDLCLQGKLDAALWLRKKM-IYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSL-----SE 289
SP+ S I G C + + AL +F+ MNK G+ P R N+++ LC +
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNN 246
Query: 290 KKGSVEKVRVRNTRRP-----CTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVK 344
KK E + P CTIL+ + N +Q A+EV W + +P+ VV
Sbjct: 247 KKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQ-ALEV-WKEMSQKNVPADSVVYN 304
Query: 345 -LMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLAC 403
++ LC G A + + +R + Y ++ ALC + +EA +L G M
Sbjct: 305 VIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNG 364
Query: 404 GLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVA 463
G+ P Y +I LC G+++ A M K LP+ L + +I +G+ + A
Sbjct: 365 GVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSA 424
Query: 464 YDLLMEMLGLGWIPELQTYN-----------LVDNLLREHDRSDLCLKLERKLENHQLQK 512
+L ML G P + T N L+D +++ + + N L
Sbjct: 425 LSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGA 484
Query: 513 LCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTRRVQ 568
C LG L A++ ML +G G+LK A LL R+Q
Sbjct: 485 ACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLS---RIQ 537
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/323 (18%), Positives = 132/323 (40%), Gaps = 9/323 (2%)
Query: 150 DDMKCLLMTVASQKGKVSPKAMSICIRFLG---RHGRIHEALSLFEEMETVFGCKPDNLV 206
++ K LL + +P + IC + ++G + +AL +++EM D++V
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQK-NVPADSVV 302
Query: 207 FNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMN 266
+N ++ LC + + + +PD ++ I C+ G+ A ++ M
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQ 362
Query: 267 KIGVLPTRSAVNMLIGELCSLSE--KKGSVEKVRVRNTRRPCTIL---VPNMGGNSGAIQ 321
GV P + + ++I LC + + ++++ P +L V + G G
Sbjct: 363 NGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTS 422
Query: 322 PAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVM 381
A+ V + + G+ P+ + L+ + G+ +A + + K+ Y +++
Sbjct: 423 SALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLL 482
Query: 382 KALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCL 441
A C + A L+ ML G +P + Y ++ LC G L A + +
Sbjct: 483 GAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGIT 542
Query: 442 PDNLTYTALIHAHGKVKNWKVAY 464
D++ + L + +++ AY
Sbjct: 543 IDHVPFLILAKKYTRLQRPGEAY 565
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 99/238 (41%), Gaps = 19/238 (7%)
Query: 345 LMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACG 404
+M +LC G+ + A+ L + + + + ++ LC +E+A L M G
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 405 LKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHA---HGKVKNWK 461
P YN++I LC++ N+D A+ +F MNK P+ +T ++HA G + N
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNN 246
Query: 462 VAYDLLMEMLGLGWIPE--------------LQTYNLVDNLLREHDRSDLCLKLERKLEN 507
LL E+L + N+V L + S + + + N
Sbjct: 247 --KKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYN 304
Query: 508 HQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTR 565
++ LC G + AAY M+++G++ + +T K GK A L T +
Sbjct: 305 VIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQ 362
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 159/381 (41%), Gaps = 23/381 (6%)
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAA 258
G +P+ +N +L LCK + +L + + +K PD S I C +G +
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG 235
Query: 259 LEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVR--VRNTRRPCTI---LVPNM 313
E+ + P S N LI LC + KG+ E +R V P I + N+
Sbjct: 236 RELAERFE-----PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINV 290
Query: 314 GGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLL-RIVEERKLTC 372
NSG I+ A + G P+ + + L+ G T +A+ L +++ L
Sbjct: 291 LCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQP 350
Query: 373 VEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVF 432
Y +++ C H + +A ++F M G P + Y S+I+ G+LD A+ ++
Sbjct: 351 NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIW 410
Query: 433 ELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREH 492
M C P+ + YT ++ A + +K A L+ M P + T+N L +
Sbjct: 411 NKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDA 470
Query: 493 DRSDLCLKLERKLE------------NHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYA 540
R D K+ R++E N L L K +++ AY + + +G+ S+
Sbjct: 471 GRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSST 530
Query: 541 RDTFEHVFQKNGKLKIARQLL 561
+T H G IA QL+
Sbjct: 531 YNTLLHGSCNAGLPGIALQLV 551
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 106/248 (42%), Gaps = 11/248 (4%)
Query: 323 AVEVFWAVFNSGLL---PSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAI 379
A+ F ++ NS L P TF V ++ +L GQ + LL+ ++ + C E+ +
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEV--MIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFIS 116
Query: 380 VMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKR 439
V+ E A +F R+ G P + +YN V+ L + V+ M +
Sbjct: 117 VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 176
Query: 440 CLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCL 499
P+ TY L+ A K A LL+EM G P+ +Y V + + E
Sbjct: 177 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR 236
Query: 500 KLERKLE------NHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGK 553
+L + E N + LCK A+E + M+EKGI + + T +V +G+
Sbjct: 237 ELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQ 296
Query: 554 LKIARQLL 561
+++A L
Sbjct: 297 IELAFSFL 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 125/306 (40%), Gaps = 11/306 (3%)
Query: 122 WAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSP--KAMSICIRFLG 179
W GF +VV Y G + +K + + ++ SP + I
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 180 RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDT 239
+ G + A+ ++ +M T GC P+ +V+ N++ LC+ +E L + + +P
Sbjct: 399 KRGSLDGAVYIWNKMLTS-GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSV 457
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAV-NMLIGELCS---LSEKKGSVE 295
+ I G C GRL A ++F QM + P N L+ L + E G
Sbjct: 458 PTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTR 517
Query: 296 KVRVRNTRRPCTILVPNMGGNSGAIQP--AVEVFWAVFNSGLLPSTFVVVKLMSELCRLG 353
++ +R + + G+ A P A+++ + G P + ++ C+ G
Sbjct: 518 EIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQG 577
Query: 354 QTEEAVKLLRIVE--ERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGV 411
+ E A ++L +V RK Y V+ LC E+ L RM++ G+ P +
Sbjct: 578 KAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIAT 637
Query: 412 YNSVIS 417
++ +I+
Sbjct: 638 WSVLIN 643
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 106/252 (42%), Gaps = 21/252 (8%)
Query: 320 IQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEG--Y 377
IQ V+ + G P+ F L+ LC+ + + A KLL VE C + Y
Sbjct: 162 IQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLL--VEMSNKGCCPDAVSY 219
Query: 378 AIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNK 437
V+ ++C+ V+E GR LA +P + VYN++I+ LC + A + M +
Sbjct: 220 TTVISSMCEVGLVKE-----GRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVE 274
Query: 438 KRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTY-NLVDN-LLR--EHD 493
K P+ ++Y+ LI+ ++A+ L +ML G P + T +LV LR D
Sbjct: 275 KGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFD 334
Query: 494 RSDLCLKLERKL--------ENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFE 545
DL ++ R N +Q C G + A M E G + +
Sbjct: 335 ALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLI 394
Query: 546 HVFQKNGKLKIA 557
+ F K G L A
Sbjct: 395 NGFAKRGSLDGA 406
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 100/458 (21%), Positives = 178/458 (38%), Gaps = 74/458 (16%)
Query: 116 TLNFFSWAG-TQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKG--KVSPKAMS 172
L F +AG + GF + + L R + FD ++ L+ + + K
Sbjct: 65 ALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFI 124
Query: 173 ICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFH 232
+R G GR ++ +F + FG K N +L VL + Q +L +F
Sbjct: 125 DLLRNYGLAGRYESSMRIFLRIPD-FGVKRSVRSLNTLLNVLIQNQR----FDLVHAMFK 179
Query: 233 KME-----SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSL 287
+ +P+ ++C + C+ + +A ++ ++ +G++P ++G
Sbjct: 180 NSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILG----- 234
Query: 288 SEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMS 347
G V + G ++ A V + + G P LM
Sbjct: 235 ----GYVAR---------------------GDMESAKRVLEEMLDRGWYPDATTYTVLMD 269
Query: 348 ELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKP 407
C+LG+ EA ++ +E+ ++ E Y ++++ALC + EA N+F ML P
Sbjct: 270 GYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMP 329
Query: 408 KLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIH---AHGKVKNWKVAY 464
+ VI LC +D A G++ M K C+PDN + LIH G+V + +
Sbjct: 330 DSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLF 389
Query: 465 DLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYE 524
D + G IP L TYN + + +C+ G+L A
Sbjct: 390 DEFEK----GSIPSLLTYNTL------------------------IAGMCEKGELTEAGR 421
Query: 525 KAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLE 562
M E+ +A+ + KNG +K ++LE
Sbjct: 422 LWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLE 459
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 139/330 (42%), Gaps = 20/330 (6%)
Query: 165 KVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETI 224
K S ++++ + L ++ R ++F+ + FG P+ N ++ LCKK I
Sbjct: 152 KRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKND----I 207
Query: 225 ELALRIFHKMES----PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNML 280
E A ++ ++ S P+ + + G+ G + +A + +M G P + +L
Sbjct: 208 ESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVL 267
Query: 281 IGELCSLS--EKKGSVEKVRVRNTRRPCTILVPNM------GGNSGAIQPAVEVFWAVFN 332
+ C L + +V +N P + M SG A +F +
Sbjct: 268 MDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGE---ARNMFDEMLE 324
Query: 333 SGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEE 392
+P + + K++ LC + +EA L R + + + ++ LC +V E
Sbjct: 325 RSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTE 384
Query: 393 ASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIH 452
A LF G P L YN++I+ +C G L A +++ M +++C P+ TY LI
Sbjct: 385 ARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIE 443
Query: 453 AHGKVKNWKVAYDLLMEMLGLGWIPELQTY 482
K N K +L EML +G P T+
Sbjct: 444 GLSKNGNVKEGVRVLEEMLEIGCFPNKTTF 473
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 111/275 (40%), Gaps = 36/275 (13%)
Query: 168 PKAMSICIRFLG--RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIE 225
P A + + G + GR EA ++ ++ME +P+ + + ++ LCK++ S E
Sbjct: 259 PDATTYTVLMDGYCKLGRFSEAATVMDDMEKN-EIEPNEVTYGVMIRALCKEKKSGEARN 317
Query: 226 LALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC 285
+ + + PD+ C I C ++ A ++ +M K +P + ++ LI LC
Sbjct: 318 MFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLC 377
Query: 286 SLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKL 345
K+G V + R + F G +PS L
Sbjct: 378 ----KEGRVTEARK---------------------------LFDEFEKGSIPSLLTYNTL 406
Query: 346 MSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGL 405
++ +C G+ EA +L + ERK Y ++++ L + V+E + ML G
Sbjct: 407 IAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGC 466
Query: 406 KPKLGVYNSVISMLCTLGNLDHAMGVFEL--MNKK 438
P + + L LG + AM + + MN K
Sbjct: 467 FPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGK 501
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 137/315 (43%), Gaps = 20/315 (6%)
Query: 180 RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDT 239
++G++ +A LF+EM G + D V+ +++ C+K + + L + K SP +
Sbjct: 306 KNGKMSDAEKLFDEMRER-GIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSS 364
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC------------SL 287
Y+ G I G C++G +GAA + ++M GV T+ N LI C +
Sbjct: 365 YTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDV 424
Query: 288 SEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMS 347
E+KG V NT C + A + + + G+ ST L+
Sbjct: 425 MEQKGFQADVFTCNTIASCFNRLKRY-------DEAKQWLFRMMEGGVKLSTVSYTNLID 477
Query: 348 ELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKP 407
C+ G EEA +L + + + Y +++ A C +++EA L M A G+ P
Sbjct: 478 VYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDP 537
Query: 408 KLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLL 467
Y S+I C N+D AM +F M K +++TYT +I K A+ L
Sbjct: 538 DSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLY 597
Query: 468 MEMLGLGWIPELQTY 482
EM G+ + + Y
Sbjct: 598 DEMKRKGYTIDNKVY 612
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 136/347 (39%), Gaps = 35/347 (10%)
Query: 224 IELALRIFHKMESP----DTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNM 279
I+L L IF +M YS + G CR G + + ++ + + G+ P N
Sbjct: 205 IDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNT 264
Query: 280 LIGELCSLSEKKG--SVEKVRVRN---TRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSG 334
+I + G V KV ++ + L+ + +G + A ++F + G
Sbjct: 265 IINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERG 324
Query: 335 LLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEAS 394
+ V L+S CR G + A L + E+ L+ Y ++ +C ++ A
Sbjct: 325 IESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAE 384
Query: 395 NLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAH 454
L M + G+ V+N++I C G +D A ++++M +K D T +
Sbjct: 385 ILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCF 444
Query: 455 GKVKNWKVAYDLLMEMLGLGWIPELQTY-NLVDNLLREHDRSDLCLKLERKLENHQLQKL 513
++K + A L M+ G +Y NL+D
Sbjct: 445 NRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLID-------------------------VY 479
Query: 514 CKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQL 560
CK G ++ A M KG+ +A + + + K GK+K AR+L
Sbjct: 480 CKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKL 526
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 149/355 (41%), Gaps = 51/355 (14%)
Query: 225 ELALRIFHKME----SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNML 280
E LR+F M S D SC +V + R+ LEIF +M GV T ++ ++
Sbjct: 171 EEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIV 230
Query: 281 IGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTF 340
+ LC ++G VEK + L+ + I+P + + N+ + F
Sbjct: 231 VEGLC----RRGEVEKSKK---------LIKEF--SVKGIKPEAYTYNTIINAYVKQRDF 275
Query: 341 VVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRM 400
V+ +L+++++ + + Y ++M+ + ++ +A LF M
Sbjct: 276 SGVE---------------GVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 401 LACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNW 460
G++ + VY S+IS C GN+ A +F+ + +K P + TY ALI KV
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM 380
Query: 461 KVAYDLLMEMLGLGW-IPELQTYNLVDNLLREH--DRSDLCLKLERKLENHQLQK----- 512
A L+ EM G I ++ L+D R+ D + + + +E Q
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDV---MEQKGFQADVFTC 437
Query: 513 ------LCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLL 561
+L + D A + M+E G+ LS + V+ K G ++ A++L
Sbjct: 438 NTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLF 492
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 1/159 (0%)
Query: 126 QMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIH 185
Q GFQ D +A R K +D+ K L + K+S + + I + G +
Sbjct: 427 QKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVE 486
Query: 186 EALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNT 245
EA LF EM + G +P+ + +N ++Y CK+ +E +L + PD+Y+ +
Sbjct: 487 EAKRLFVEMSSK-GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSL 545
Query: 246 IVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGEL 284
I G C + A+ +FS+M G+ ++I L
Sbjct: 546 IHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGL 584
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 176/435 (40%), Gaps = 53/435 (12%)
Query: 81 GDTAIDHVLDRYKGDLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMA 140
G +AI L LS + V VL G A + FF WA + G D +
Sbjct: 100 GKSAIQKSLSSLGIGLSIDIVADVLNRGNLSGEA-MVTFFDWAVREPGVTKDVGSYSVIL 158
Query: 141 DFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGC 200
LGRRKLF M +L + + + ++I + R + A+ LFEE E+ FG
Sbjct: 159 RALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESES-FGV 217
Query: 201 KPDNLVFNNVLYVLCKKQ------------------------------SSEETIELALRI 230
K FN +L LC++ S +E ++
Sbjct: 218 KCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKV 277
Query: 231 FHKM-ES---PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCS 286
+M ES PD S + I G R GR+ ++EIF + G +P + N +I S
Sbjct: 278 LKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFIS 337
Query: 287 LSEKKGSVEKVRVRNTRRPCTILVPNMGGNSG---------AIQPAVEVFWAVFNSGLLP 337
+ S+ R R C PN+ S + A+E+F + + G+LP
Sbjct: 338 ARDFDESMRYYR-RMLDEECE---PNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLP 393
Query: 338 STFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTC--VEEGYAIVMKALCDHCQVEEASN 395
+T +V + LC G A+ + + + RK C E Y +++K L + N
Sbjct: 394 TTGLVTSFLKPLCSYGPPHAAMVIYQ--KSRKAGCRISESAYKLLLKRLSRFGKCGMLLN 451
Query: 396 LFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHG 455
++ M G + VY ++ LC +G+L++A+ V E +K P+ Y+ L
Sbjct: 452 VWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLM 511
Query: 456 KVKNWKVAYDLLMEM 470
++AY L +++
Sbjct: 512 ASNKTELAYKLFLKI 526
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 115/538 (21%), Positives = 215/538 (39%), Gaps = 77/538 (14%)
Query: 80 PGDTAIDHVLDRYKGDLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYM 139
P +A ++ + S+ +L + Q LG T++ F+ GF + V +
Sbjct: 166 PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFT--TLIRGFAKEGRVDSAL 223
Query: 140 ADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFG 199
+ L D+MK S ++CI G+ G++ A F E+E G
Sbjct: 224 S-------LLDEMK-------SSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN-G 268
Query: 200 CKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGF---------- 249
KPD + + +++ VLCK +E +E+ + P TY+ I+G+
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328
Query: 250 -------------------C------RLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGEL 284
C ++G++ AL++F +M K P S N+LI L
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDML 387
Query: 285 C------SLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPS 338
C + E + S++K + R I+V + S + A +F + P
Sbjct: 388 CRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRL-CKSQKLDEACAMFEEMDYKVCTPD 446
Query: 339 TFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFG 398
L+ L ++G+ ++A K+ + + Y ++K +H + E+ ++
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 399 RMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVK 458
M+ P L + N+ + + G + +FE + +R +PD +Y+ LIH K
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566
Query: 459 NWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQK------ 512
Y+L M G + + + YN+V + + + + +L +++ +
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626
Query: 513 -----LCKLGQLDAAY---EKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLE 562
L K+ +LD AY E+AKS K I L+ + F K G++ A +LE
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKS---KRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 180/432 (41%), Gaps = 25/432 (5%)
Query: 147 KLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLV 206
K+F++MK + + +I I L R G++ A L + M+ G P+
Sbjct: 364 KVFEEMK--------KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKA-GLFPNVRT 414
Query: 207 FNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMN 266
N ++ LCK Q +E + + +K+ +PD + + I G ++GR+ A +++ +M
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML 474
Query: 267 KIGVLPTRSAVNMLIGELCSLSEKKGS--VEKVRVRNTRRPCTILVPNMGG---NSGAIQ 321
LI + K+ + K + P L+ +G +
Sbjct: 475 DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPE 534
Query: 322 PAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVM 381
+F + +P L+ L + G E +L ++E+ Y IV+
Sbjct: 535 KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Query: 382 KALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCL 441
C +V +A L M G +P + Y SVI L + LD A +FE KR
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIE 654
Query: 442 PDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN-LVDNLLR--EHDRSDLC 498
+ + Y++LI GKV AY +L E++ G P L T+N L+D L++ E + + +C
Sbjct: 655 LNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVC 714
Query: 499 LKLERKLENHQLQ--------KLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQK 550
+ ++L+ Q LCK+ + + A+ + M ++G+ S + T K
Sbjct: 715 FQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAK 774
Query: 551 NGKLKIARQLLE 562
G + A L +
Sbjct: 775 AGNIAEAGALFD 786
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 153/353 (43%), Gaps = 20/353 (5%)
Query: 237 PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPT-RSAVNMLIG--ELCSLSEKKGS 293
P++Y+ ++ CR A +I +M+ G P+ + + M++G + L E
Sbjct: 98 PESYNSLLLVMARCR--NFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDV 155
Query: 294 VEKVRVRNTRRPCTILVPNMGGNSGAIQPA---VEVFWAVFNSGLLPSTFVVVKLMSELC 350
V+ +R + RP + G A+ + + +F + G P+ + L+
Sbjct: 156 VQMMR-KFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFA 214
Query: 351 RLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLG 410
+ G+ + A+ LL ++ L Y + + + +V+ A F + A GLKP
Sbjct: 215 KEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274
Query: 411 VYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEM 470
Y S+I +LC LD A+ +FE + K R +P Y +I +G + AY LL
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 471 LGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLE----------NHQLQKLCKLGQLD 520
G IP + YN + LR+ + D LK+ +++ N + LC+ G+LD
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLD 394
Query: 521 AAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLET-TRRVQEPEE 572
A+E SM + G+ + + K+ KL A + E +V P+E
Sbjct: 395 TAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDE 447
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 123/295 (41%), Gaps = 6/295 (2%)
Query: 180 RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDT 239
+ G + ++FEE++ PD ++ +++ L K + ET EL + + DT
Sbjct: 529 KAGEPEKGRAMFEEIKARRFV-PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDT 587
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCS---LSEKKGSVEK 296
+ I GFC+ G++ A ++ +M G PT +I L L E E+
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 647
Query: 297 VRVRNTRRPCTIL--VPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQ 354
+ + I + + G G I A + + GL P+ + L+ L + +
Sbjct: 648 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707
Query: 355 TEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNS 414
EA+ + ++E K T + Y I++ LC + +A + M G+KP Y +
Sbjct: 708 INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTT 767
Query: 415 VISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLME 469
+IS L GN+ A +F+ +PD+ Y A+I A+ L E
Sbjct: 768 MISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEE 822
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/362 (19%), Positives = 138/362 (38%), Gaps = 6/362 (1%)
Query: 139 MADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVF 198
+ D LG+ DD + + + + + I+ HGR + ++++M
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ- 511
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAA 258
C PD + N + + K E+ + I + PD S I G + G
Sbjct: 512 NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANET 571
Query: 259 LEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTR--RPCTILVPNMGGN 316
E+F M + G + A N++I C + + + + T+ P + ++
Sbjct: 572 YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDG 631
Query: 317 SGAIQ---PAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCV 373
I A +F + + + + L+ ++G+ +EA +L + ++ LT
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691
Query: 374 EEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFE 433
+ ++ AL ++ EA F M P Y +I+ LC + + A ++
Sbjct: 692 LYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751
Query: 434 LMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHD 493
M K+ P ++YT +I K N A L G +P+ YN + L +
Sbjct: 752 EMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGN 811
Query: 494 RS 495
R+
Sbjct: 812 RA 813
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 154/380 (40%), Gaps = 52/380 (13%)
Query: 205 LVFNNVLYVLCKKQSSEETIELALRIFHKMES----PDTYSCGNTIVGFCRLGRLGAALE 260
+V ++L +C+ +LR+FHKM+ P + + +L A +
Sbjct: 83 VVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFK 142
Query: 261 IFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAI 320
+ M +IG+ PT +++N+LI LC N G +
Sbjct: 143 FYKNMREIGLPPTVASLNVLIKALCR-----------------------------NDGTV 173
Query: 321 QPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIV 380
+++F + G P ++ L+S LCR G+ +EA KL + E+ Y +
Sbjct: 174 DAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSL 233
Query: 381 MKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRC 440
+ LC V+EA M + G++P + Y+S++ LC G AM +FE+M + C
Sbjct: 234 INGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGC 293
Query: 441 LPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLV-------------DN 487
P+ +TYT LI K + + A +LL M G P+ Y V N
Sbjct: 294 RPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAAN 353
Query: 488 LLREH-----DRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARD 542
L E + L + K N ++ LC A+ SM +GI + +
Sbjct: 354 FLDEMILGGITPNRLTWNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSRGISVEVETLE 412
Query: 543 TFEHVFQKNGKLKIARQLLE 562
+ K G+ + A QL++
Sbjct: 413 SLVKCLCKKGEFQKAVQLVD 432
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 134/325 (41%), Gaps = 44/325 (13%)
Query: 167 SPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIEL 226
S KA + L +++ A ++ M + G P N ++ LC+ ++ T++
Sbjct: 120 SQKAYVTVLAILVEENQLNLAFKFYKNMREI-GLPPTVASLNVLIKALCR---NDGTVDA 175
Query: 227 ALRIFHKME----SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIG 282
L+IF +M PD+Y+ G I G CR GR+ A ++F++M + PT LI
Sbjct: 176 GLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLIN 235
Query: 283 ELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVV 342
LC S + A+ + + G+ P+ F
Sbjct: 236 GLC------------------------------GSKNVDEAMRYLEEMKSKGIEPNVFTY 265
Query: 343 VKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLA 402
LM LC+ G++ +A++L ++ R Y ++ LC +++EA L RM
Sbjct: 266 SSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNL 325
Query: 403 CGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKV----- 457
GLKP G+Y VIS C + A + M P+ LT+ + +V
Sbjct: 326 QGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC 385
Query: 458 KNWKV-AYDLLMEMLGLGWIPELQT 481
N+ A+ L + M G E++T
Sbjct: 386 ANYPSRAFTLYLSMRSRGISVEVET 410
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 92/224 (41%), Gaps = 25/224 (11%)
Query: 178 LGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESP 237
L + GR +A+ LFE M GC+P+ + + ++ LCK+Q +E +EL R+ + P
Sbjct: 272 LCKDGRSLQAMELFEMM-MARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKP 330
Query: 238 DTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKV 297
D G I GFC + + A +M G+ P R N+ + K S E V
Sbjct: 331 DAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHV---------KTSNEVV 381
Query: 298 RVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEE 357
R P + S I VE + L+ LC+ G+ ++
Sbjct: 382 RGLCANYPSRAFTLYLSMRSRGISVEVETLES---------------LVKCLCKKGEFQK 426
Query: 358 AVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRML 401
AV+L+ + + + +++ D V EAS+ R L
Sbjct: 427 AVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLLRDL 470
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 184/424 (43%), Gaps = 52/424 (12%)
Query: 156 LMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLC 215
+M + + G+ A + I + RI +A + + M + PD + +N ++ LC
Sbjct: 146 VMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSK-DFSPDTVTYNIMIGSLC 204
Query: 216 KKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRL-------GRLGAALEIFSQMNKI 268
S ++LAL++ +++ S + C T++ + L G + AL++ +M
Sbjct: 205 ----SRGKLDLALKVLNQLLSDN---CQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 257
Query: 269 GVLPTRSAVNMLIGELCSLSEKKGSVEKV--RVRNTR-RPCTILVPNMGG------NSGA 319
G+ P N +I +C K+G V++ VRN + C V + N G
Sbjct: 258 GLKPDMFTYNTIIRGMC----KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGK 313
Query: 320 IQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAI 379
+ ++ +F+ P+ L++ LCR G+ EEA+ LL++++E+ LT Y
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 380 VMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKR 439
++ A C +++ A M++ G P + YN+V++ LC G D A+ +F + +
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 440 CLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCL 499
C P++ +Y + A + A +++EM+ G P+ TY
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITY----------------- 476
Query: 500 KLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQ 559
N + LC+ G +D A+E M H S + F K +++ A
Sbjct: 477 -------NSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIN 529
Query: 560 LLET 563
+LE+
Sbjct: 530 VLES 533
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 160/398 (40%), Gaps = 64/398 (16%)
Query: 215 CKKQSSEETIELALRIFHKMESPDTYSCGNTIV--------------------------- 247
C+ + E++ L + K +PD C I
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 248 -------GFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVR-- 298
GFC++ R+ A + +M P N++IG LCS + +++ +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 299 VRNTRRPCTI---LVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQT 355
+ + +P I ++ G + A+++ + + GL P F ++ +C+ G
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 356 EEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSV 415
+ A +++R +E + Y I+++AL + + EE L +M + P + Y+ +
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 416 ISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGW 475
I+ LC G ++ AM + +LM +K PD +Y LI A + VA + L M+ G
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399
Query: 476 IPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIH 535
+P++ YN V L LCK G+ D A E + E G
Sbjct: 400 LPDIVNYNTV------------------------LATLCKNGKADQALEIFGKLGEVGCS 435
Query: 536 LSAYARDT-FEHVFQKNGKLKIARQLLETTRRVQEPEE 572
++ + +T F ++ K++ +LE +P+E
Sbjct: 436 PNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDE 473
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 122/309 (39%), Gaps = 31/309 (10%)
Query: 170 AMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALR 229
+ +I +R L G+ E L +M + C P+ + ++ ++ LC+ EE + L
Sbjct: 300 SYNILLRALLNQGKWEEGEKLMTKMFSE-KCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 230 IFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSE 289
+ K +PD YS I FCR GRL A+E M G LP N ++ LC
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK--- 415
Query: 290 KKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSEL 349
+G A+E+F + G P++ + S L
Sbjct: 416 ---------------------------NGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Query: 350 CRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKL 409
G A+ ++ + + E Y ++ LC V+EA L M +C P +
Sbjct: 449 WSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508
Query: 410 GVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLME 469
YN V+ C ++ A+ V E M C P+ TYT LI G A +L +
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELAND 568
Query: 470 MLGLGWIPE 478
++ + I E
Sbjct: 569 LVRIDAISE 577
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 128/311 (41%), Gaps = 31/311 (9%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
IR + + G + A + +E + GC+PD + +N +L L + EE +L ++F +
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLE-LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV 294
P+ + I CR G++ A+ + M + G+ P + + LI C
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC--------- 379
Query: 295 EKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQ 354
G + A+E + + G LP +++ LC+ G+
Sbjct: 380 ---------------------REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 355 TEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNS 414
++A+++ + E + Y + AL A ++ M++ G+ P YNS
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 415 VISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLG 474
+IS LC G +D A + M P +TY ++ K + A ++L M+G G
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 475 WIPELQTYNLV 485
P TY ++
Sbjct: 539 CRPNETTYTVL 549
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 115/275 (41%), Gaps = 31/275 (11%)
Query: 155 LLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVL 214
L+ + S+K + SI I L R G+I EA++L + M+ G PD ++ ++
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK-GLTPDAYSYDPLIAAF 378
Query: 215 CKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTR 274
C++ + IE + PD + + C+ G+ ALEIF ++ ++G P
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438
Query: 275 SAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSG 334
S+ N + L S S +K+R A+ + + ++G
Sbjct: 439 SSYNTMFSALWS------SGDKIR------------------------ALHMILEMMSNG 468
Query: 335 LLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEAS 394
+ P ++S LCR G +EA +LL + + Y IV+ C ++E+A
Sbjct: 469 IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAI 528
Query: 395 NLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAM 429
N+ M+ G +P Y +I + G AM
Sbjct: 529 NVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM 563
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 195/488 (39%), Gaps = 36/488 (7%)
Query: 97 SSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLL 156
S + ++R+++ + A L F WA T GF S + L + FD + LL
Sbjct: 42 SDDHIVRLILDQKSASGA--LETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLL 99
Query: 157 MTVASQKGKVSPKAMSICI-RFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLC 215
+ G A+ + I R GR I +S+ + + + FG KP VFN++L VL
Sbjct: 100 DEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVD-LVSKFGIKPSLKVFNSILDVLV 158
Query: 216 KKQSSEETIELALRIF-HKMESP----DTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGV 270
K E I++A F KM + D Y+ G + G R+G ++ M GV
Sbjct: 159 K-----EDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGV 213
Query: 271 LPTRSAVNMLIGELCSLSEKKGSVEKVR--VRNTRRP----CTILVPNMGGNSGAIQPAV 324
P N L+ LC K G V + R + + P IL+ IQ V
Sbjct: 214 APNAVVYNTLLHALC----KNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMV 269
Query: 325 EVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKAL 384
+ F+ G +P V K+M LC G+ EA+++L VE + ++K
Sbjct: 270 -LLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGY 328
Query: 385 CDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDN 444
C ++ A F M G P + YN +I+ C +G LD A+ F M +
Sbjct: 329 CALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNF 388
Query: 445 LTYTALIHAHGKVKNWKVAYDLLMEMLGLGWI--PELQTYNLVDNLLREHDRSDLCLKLE 502
T+ LI +L M + + YN V + +R + L+
Sbjct: 389 ATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFL 448
Query: 503 RKLE---------NHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGK 553
K+E + +L LC+ G +D M+ +G S H + ++GK
Sbjct: 449 LKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGK 508
Query: 554 LKIARQLL 561
++ + +L+
Sbjct: 509 IEESLELI 516
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 140/353 (39%), Gaps = 51/353 (14%)
Query: 198 FGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGA 257
G PD + V+ VLC + E +E+ R+ K D +C + G+C LG++
Sbjct: 277 LGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRV 336
Query: 258 ALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNS 317
A F +M + G LP N+LI C + +++ T
Sbjct: 337 AQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKT--------------- 381
Query: 318 GAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLT--CVEE 375
A+ +A FN+ L+ L G+T++ +K+L ++++ +
Sbjct: 382 ----DAIRWNFATFNT-----------LIRGLSIGGRTDDGLKILEMMQDSDTVHGARID 426
Query: 376 GYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELM 435
Y V+ + E+A +M L P+ + + LC G +D ++ M
Sbjct: 427 PYNCVIYGFYKENRWEDALEFLLKMEK--LFPRAVDRSFKLISLCEKGGMDDLKTAYDQM 484
Query: 436 NKKRCLPDNLTYTALIH---AHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREH 492
+ +P + LIH HGK++ + +L+ +M+ G++P T+N V +
Sbjct: 485 IGEGGVPSIIVSHCLIHRYSQHGKIEE---SLELINDMVTRGYLPRSSTFNAVIIGFCKQ 541
Query: 493 DRSDLCLKLERKLE-----------NHQLQKLCKLGQLDAAYEKAKSMLEKGI 534
D+ +K + N L++LC G + A+ M+EK I
Sbjct: 542 DKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSI 594
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/339 (19%), Positives = 130/339 (38%), Gaps = 49/339 (14%)
Query: 237 PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEK 296
PD I GF R + + + ++K G+ P+ N ++ L K ++
Sbjct: 110 PDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLV-----KEDIDI 164
Query: 297 VRVRNTRRPCTILVPNMGGN-------------SGAIQPAVEVFWAVFNSGLLPSTFVVV 343
R TR+ ++ + G+ + I ++ + SG+ P+ V
Sbjct: 165 AREFFTRK---MMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYN 221
Query: 344 KLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLAC 403
L+ LC+ G+ A L+ ++E + + I++ A C+ ++ ++ L + +
Sbjct: 222 TLLHALCKNGKVGRARSLMSEMKEPN----DVTFNILISAYCNEQKLIQSMVLLEKCFSL 277
Query: 404 GLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVA 463
G P + V+ +LC G + A+ V E + K D + L+ + + +VA
Sbjct: 278 GFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVA 337
Query: 464 YDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAY 523
+EM G++P ++TYNL+ + C +G LD+A
Sbjct: 338 QRFFIEMERKGYLPNVETYNLL------------------------IAGYCDVGMLDSAL 373
Query: 524 EKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLE 562
+ M I + +T G+ ++LE
Sbjct: 374 DTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILE 412
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 159/389 (40%), Gaps = 30/389 (7%)
Query: 183 RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSC 242
+ +EAL LF M P + F +L V+ K + + I L + S D Y+C
Sbjct: 52 QFNEALDLFTHMVESRPL-PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTC 110
Query: 243 GNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC--SLSEKKGSVEKVRVR 300
+ FC+ + A +M K+G P LI C + E+ S+ V
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 301 NTRRPCTILVPNMGGN---SGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEE 357
+P ++ + + +G + A+ +F + N G+ P + L++ LC G+ +
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 358 AVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVIS 417
A LLR + +RK+ + ++ A + +A L+ M+ + P + Y S+I+
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 418 MLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIP 477
C G +D A +F LM K C PD + YT+LI+ K K A + EM G
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 478 ELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLS 537
TY + +Q ++G+ + A E M+ +G+ +
Sbjct: 351 NTITYTTL------------------------IQGFGQVGKPNVAQEVFSHMVSRGVPPN 386
Query: 538 AYARDTFEHVFQKNGKLKIARQLLETTRR 566
+ H NGK+K A + E ++
Sbjct: 387 IRTYNVLLHCLCYNGKVKKALMIFEDMQK 415
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 146/332 (43%), Gaps = 22/332 (6%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
I L ++G ++ ALSLF++ME +G +PD +++ +++ LC + L + +
Sbjct: 184 IDSLCKNGHVNYALSLFDQMEN-YGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK 242
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV 294
PD + I F + G+ A E++++M ++ + P LI C +G V
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC----MEGCV 298
Query: 295 EKVRVRNTRRPCTILVPNMGGNSGAIQ---------PAVEVFWAVFNSGLLPSTFVVVKL 345
++ R P++ + I A+++F+ + GL +T L
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358
Query: 346 MSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLA--- 402
+ ++G+ A ++ + R + Y +++ LC + +V++A +F M
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Query: 403 CGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKV 462
G+ P + YN ++ LC G L+ A+ VFE M K+ D T I G K KV
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREM--DIGIITYTIIIQGMCKAGKV 476
Query: 463 --AYDLLMEMLGLGWIPELQTY-NLVDNLLRE 491
A +L + G P + TY ++ L RE
Sbjct: 477 KNAVNLFCSLPSKGVKPNVVTYTTMISGLFRE 508
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 127/281 (45%), Gaps = 41/281 (14%)
Query: 142 FLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCK 201
FL +L+++M + M++A + C+ G + EA +F MET GC
Sbjct: 263 FLDAEELYNEM--IRMSIAPNIFTYTSLINGFCME-----GCVDEARQMFYLMETK-GCF 314
Query: 202 PDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEI 261
PD + + +++ CK + ++ +++ + K + +T + I GF ++G+ A E+
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 262 FSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQ 321
FS M GV P N+L+ LC +G ++
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCY------------------------------NGKVK 404
Query: 322 PAVEVFWAVFN---SGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYA 378
A+ +F + G+ P+ + L+ LC G+ E+A+ + + +R++ Y
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYT 464
Query: 379 IVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISML 419
I+++ +C +V+ A NLF + + G+KP + Y ++IS L
Sbjct: 465 IIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGL 505
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 160/366 (43%), Gaps = 8/366 (2%)
Query: 132 DDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLF 191
D + + D L + + DD L + ++ + + S I L +GR +A L
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 192 EEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCR 251
+M P+ + FN ++ K+ E +L + + PD ++ + + GFC
Sbjct: 319 SDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377
Query: 252 LGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRR------P 305
RL A ++F M P N LI C + E R + R
Sbjct: 378 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437
Query: 306 CTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIV 365
T L+ + + G A +VF + + G+ P L+ LC G+ E+A+++ +
Sbjct: 438 YTTLIQGLF-HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 366 EERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNL 425
++ ++ Y +++ +C +V++ +LF + G+KP + YN++IS LC+ L
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 426 DHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLV 485
A + + M + LP++ TY LI AH + + + +L+ EM ++ + T LV
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 616
Query: 486 DNLLRE 491
N+L +
Sbjct: 617 ANMLHD 622
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 146/307 (47%), Gaps = 19/307 (6%)
Query: 202 PDNLVFNNVLYVLCKKQSSEETIELA-----LRIFHKMESPDTYSCGNTIVGFCRLGRLG 256
P + FN +L + K + + I L L I H + Y+ I FCR ++
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL-----YTYNILINCFCRRSQIS 137
Query: 257 AALEIFSQMNKIGVLPTRSAVNMLIGELCS---LSEKKGSVEKVRVRNTRRPCTI----L 309
AL + +M K+G P+ ++ L+ C +S+ V+++ V RP TI L
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM-VEMGYRPDTITFTTL 196
Query: 310 VPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERK 369
+ + ++ A + AV + + G P+ +++ LC+ G T+ A+ LL +E K
Sbjct: 197 IHGLFLHNKASE-AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK 255
Query: 370 LTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAM 429
+ + ++ +LC + V++A NLF M G++P + Y+S+IS LC+ G A
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 430 GVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLL 489
+ M +K+ P+ +T+ ALI A K + A L +M+ P++ TYN + N
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 490 REHDRSD 496
HDR D
Sbjct: 376 CMHDRLD 382
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 156/378 (41%), Gaps = 50/378 (13%)
Query: 181 HGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESP--- 237
H + EA++L + M GC+P+ + + V+ LCK+ ++ LAL + +KME+
Sbjct: 203 HNKASEAVALVDRM-VQRGCQPNLVTYGVVVNGLCKRGDTD----LALNLLNKMEAAKIE 257
Query: 238 -DTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEK 296
D I C+ + AL +F +M G+ P + LI LCS
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY--------- 308
Query: 297 VRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTE 356
G A ++ + + P+ L+ + G+
Sbjct: 309 ---------------------GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347
Query: 357 EAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVI 416
EA KL + +R + Y ++ C H ++++A +F M++ P + YN++I
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 417 SMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWI 476
C ++ +F M+ + + D +TYT LI + A + +M+ G
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467
Query: 477 PELQTYNLVDNLLREHDRSDLCL-----------KLERKLENHQLQKLCKLGQLDAAYEK 525
P++ TY+++ + L + + + L KL+ + ++ +CK G++D ++
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527
Query: 526 AKSMLEKGIHLSAYARDT 543
S+ KG+ + +T
Sbjct: 528 FCSLSLKGVKPNVVTYNT 545
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 110/256 (42%), Gaps = 17/256 (6%)
Query: 320 IQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAI 379
+ A+ +F + S LPS KL+S + ++ + + + L ++ ++ Y I
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 380 VMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKR 439
++ C Q+ A L G+M+ G +P + +S+++ C + A+ + + M +
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 440 CLPDNLTYTALIHA---HGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSD 496
PD +T+T LIH H K A L+ M+ G P L TY +V N L + +D
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASE---AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 497 LCLKLERKLE-----------NHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFE 545
L L L K+E N + LCK +D A K M KGI + +
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 546 HVFQKNGKLKIARQLL 561
G+ A QLL
Sbjct: 303 SCLCSYGRWSDASQLL 318
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 169/411 (41%), Gaps = 31/411 (7%)
Query: 178 LGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESP 237
L + G I +A + EEM G KP+ ++ LCK+ +E+ A R+F K+
Sbjct: 297 LCKKGSIKQAFEMLEEM-VRNGWKPNVYTHTALIDGLCKRGWTEK----AFRLFLKLVRS 351
Query: 238 DTY-----SCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKG 292
DTY + + I G+C+ +L A +FS+M + G+ P + LI C K G
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC----KAG 407
Query: 293 SVEKVRVRNTRRPCTILVPNMGGNSGAIQP---------AVEVFWAVFNSGLLPSTFVVV 343
S + +PN+ + AI A E+ F+ GL
Sbjct: 408 SFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYT 467
Query: 344 KLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLAC 403
L+ E C+ +A+ + + I++ A C +++E+ LF +++
Sbjct: 468 ILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSL 527
Query: 404 GLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVA 463
GL P Y S+IS C G++D A+ F M + C+PD+ TY +LI K A
Sbjct: 528 GLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEA 587
Query: 464 YDLLMEMLGLGWI-PELQTYNLVDNLLREHDRSDLCLKLE---RKLENHQ----LQKLCK 515
L M+ G PE+ L + +D ++ + LE +KL ++KLC
Sbjct: 588 CKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCS 647
Query: 516 LGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTRR 566
++ A + +LEK F ++GK + L E R
Sbjct: 648 EKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTERISR 698
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 141/331 (42%), Gaps = 23/331 (6%)
Query: 169 KAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELAL 228
+ M +R GR++EA+ + +M+ G P ++ N VL + + IE A
Sbjct: 148 EVMRCMLRNFSEIGRLNEAVGMVMDMQNQ-GLTPSSITMNCVLEIAVELG----LIEYAE 202
Query: 229 RIFHKMES----PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGEL 284
+F +M PD+ S ++G R G++ A + M + G +P + +++ L
Sbjct: 203 NVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTAL 262
Query: 285 CSLSEKKGSVEKVRVRNTRRPCTILVPNMGG---------NSGAIQPAVEVFWAVFNSGL 335
C + G V + + PN+ G+I+ A E+ + +G
Sbjct: 263 C----ENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGW 318
Query: 336 LPSTFVVVKLMSELCRLGQTEEAVKL-LRIVEERKLTCVEEGYAIVMKALCDHCQVEEAS 394
P+ + L+ LC+ G TE+A +L L++V Y ++ C ++ A
Sbjct: 319 KPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAE 378
Query: 395 NLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAH 454
LF RM GL P + Y ++I+ C G+ A + LM + +P+ TY A I +
Sbjct: 379 MLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSL 438
Query: 455 GKVKNWKVAYDLLMEMLGLGWIPELQTYNLV 485
K AY+LL + G + TY ++
Sbjct: 439 CKKSRAPEAYELLNKAFSCGLEADGVTYTIL 469
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 1/174 (0%)
Query: 318 GAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGY 377
G + AV + + N GL PS+ + ++ LG E A + + R + Y
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220
Query: 378 AIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNK 437
+++ +++EA M+ G P +++ LC G ++ A+ F M
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 280
Query: 438 KRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN-LVDNLLR 490
P+ + +T+LI K + K A+++L EM+ GW P + T+ L+D L +
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCK 334
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 124/520 (23%), Positives = 217/520 (41%), Gaps = 33/520 (6%)
Query: 82 DTAIDHVLDRYKGDLSSNFVLRVLMSYQHLGRAK-TLNFFSWAGTQMGFQFDDSVVEYMA 140
++ +D ++ LS NFV VL S + + +FF W+ Q + + +
Sbjct: 100 ESNLDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLV 159
Query: 141 DFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGC 200
D L K D ++ + + + ++ A + I+ G+ G + E L ++ +M+ G
Sbjct: 160 DVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKEN-GI 218
Query: 201 KPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES----PDTYSCGNTIVGFCRLGRLG 256
+P +N ++ L S ++ A R+F MES PD + I G+C+ G+
Sbjct: 219 EPTLYTYNFLMNGLV----SAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 257 AALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGS----VEKVRVRNTRRPCTILVPN 312
A+E M G + +I + C GS +++ + + P
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMI-QACYADSDFGSCVALYQEMDEKGIQVPPHAFSLV 333
Query: 313 MGG--NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKL 370
+GG G + VF + G P+ + L+ + G E+A++LL + +
Sbjct: 334 IGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGF 393
Query: 371 TCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMG 430
Y++V+ LC + +VEEA + F GL Y+S+I L G +D A
Sbjct: 394 KPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAER 453
Query: 431 VFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEM-LGLGWIPELQTYN-LVDNL 488
+FE M++K C D+ Y ALI A K + A L M G + TY L+ +
Sbjct: 454 LFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGM 513
Query: 489 LREHDRSDLCLKLERKLENHQLQK-----------LCKLGQLDAAYEKAKSMLEKGIHLS 537
+EH R++ LKL + + + LC G++ A + + G+ L
Sbjct: 514 FKEH-RNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD 572
Query: 538 AYARDTFEHVFQKNGKLKIARQLLE-TTRRVQEPEETNRT 576
A D + K G++K A +L + T R +E RT
Sbjct: 573 AACEDMI-NTLCKAGRIKEACKLADGITERGREVPGRIRT 611
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 141/356 (39%), Gaps = 79/356 (22%)
Query: 162 QKG-KVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSS 220
+KG +V P A S+ I L + G+++E ++FE M G KP+ ++ ++ K S
Sbjct: 320 EKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENM-IRKGSKPNVAIYTVLIDGYAKSGSV 378
Query: 221 EETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNML 280
E+ I L R+ + PD + + G C+ GR+ AL+ F G+ + L
Sbjct: 379 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSL 438
Query: 281 IGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTF 340
I L G +G + A +F + G ++
Sbjct: 439 IDGL------------------------------GKAGRVDEAERLFEEMSEKGCTRDSY 468
Query: 341 VVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEG-------YAIVMKALCDHCQVEEA 393
L+ + + +EA+ L + +EE EEG Y I++ + + EEA
Sbjct: 469 CYNALIDAFTKHRKVDEAIALFKRMEE------EEGCDQTVYTYTILLSGMFKEHRNEEA 522
Query: 394 SNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHA---------MGVF------ELMN-- 436
L+ M+ G+ P + ++ + LC G + A MGV +++N
Sbjct: 523 LKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTL 582
Query: 437 ------KKRC-LPDNLT----------YTALIHAHGKVKNWKVAYDLLMEMLGLGW 475
K+ C L D +T T +I+A KV +A L+ +G+G+
Sbjct: 583 CKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGY 638
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 161/380 (42%), Gaps = 55/380 (14%)
Query: 162 QKGKVSPKAMSIC--IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQS 219
+ G VS + C I + G +A+ F M+ F C+PD +N +L V+ ++
Sbjct: 119 KSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKE-FDCRPDVFTYNVILRVMMRE-- 175
Query: 220 SEETIELALRIFHKME----SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRS 275
E LA ++++M SP+ Y+ G + G + GR A ++F M G+ P R
Sbjct: 176 -EVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRV 234
Query: 276 AVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGL 335
+LI LC ++GS + R ++F+ + SG
Sbjct: 235 TYTILISGLC----QRGSADDAR--------------------------KLFYEMQTSGN 264
Query: 336 LPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASN 395
P + L+ C+LG+ EA +LLR+ E+ GY+ ++ L + +A
Sbjct: 265 YPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFE 324
Query: 396 LFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHG 455
L+ ML +KP + +Y +I L G ++ A+ + M K PD Y A+I A
Sbjct: 325 LYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALC 384
Query: 456 KVKNWKVAYDLLMEMLGLGWIPELQTYNLV------DNLLREHDRSDLCLKLERK----- 504
+ L +EM P+ T+ ++ + L+RE + ++ ++E+
Sbjct: 385 GRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAE--EIFTEIEKSGCSPS 442
Query: 505 --LENHQLQKLCKLGQLDAA 522
N + LCK G+L A
Sbjct: 443 VATFNALIDGLCKSGELKEA 462
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 175/397 (44%), Gaps = 49/397 (12%)
Query: 178 LGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES- 236
L + GR +A +F++M T G P+ + + ++ LC++ S+++ A ++F++M++
Sbjct: 208 LYKKGRTSDAQKMFDDM-TGRGISPNRVTYTILISGLCQRGSADD----ARKLFYEMQTS 262
Query: 237 ---PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIG-VLPTRSAVNMLIG-----ELCSL 287
PD+ + + GFC+LGR+ A E+ K G VL R +++ G
Sbjct: 263 GNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQA 322
Query: 288 SEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMS 347
E ++ K ++ TIL+ + +G I+ A+++ ++ + G+ P T+ ++
Sbjct: 323 FELYANMLKKNIKPDIILYTILIQGL-SKAGKIEDALKLLSSMPSKGISPDTYCYNAVIK 381
Query: 348 ELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKP 407
LC G EE L + E + + I++ ++C + V EA +F + G P
Sbjct: 382 ALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSP 441
Query: 408 KLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKV----- 462
+ +N++I LC G L A + M R P +L + L H+ + + V
Sbjct: 442 SVATFNALIDGLCKSGELKEARLLLHKMEVGR--PASL-FLRLSHSGNRSFDTMVESGSI 498
Query: 463 --AYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLE-----------NHQ 509
AY L G P++ +YN++ N D LKL L+ N
Sbjct: 499 LKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTL 558
Query: 510 LQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEH 546
+ L ++G+ + A++ YA+D F H
Sbjct: 559 INGLHRVGREEEAFKL------------FYAKDDFRH 583
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 145/344 (42%), Gaps = 43/344 (12%)
Query: 146 RKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNL 205
RKLF +M+ T + V+ A+ LGR E L LFE+ V G +
Sbjct: 253 RKLFYEMQ----TSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRG--- 305
Query: 206 VFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQM 265
+++++ L + + + EL + K PD I G + G++ AL++ S M
Sbjct: 306 -YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSM 364
Query: 266 NKIGVLPTRSAVNMLIGELCS---LSEKKG-SVEKVRVRNTRRPCT--ILVPNMGGNSGA 319
G+ P N +I LC L E + +E + CT IL+ +M N G
Sbjct: 365 PSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRN-GL 423
Query: 320 IQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVE------------- 366
++ A E+F + SG PS L+ LC+ G+ +EA LL +E
Sbjct: 424 VREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSH 483
Query: 367 --ERKL-TCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLG 423
R T VE G ++KA D + G P + YN +I+ C G
Sbjct: 484 SGNRSFDTMVESGS--ILKAYRDLAHFADT----------GSSPDIVSYNVLINGFCRAG 531
Query: 424 NLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLL 467
++D A+ + ++ K PD++TY LI+ +V + A+ L
Sbjct: 532 DIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 130/295 (44%), Gaps = 19/295 (6%)
Query: 163 KGKVSPKAM--SICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSS 220
K + P + +I I+ L + G+I +AL L M + G PD +N V+ LC +
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSK-GISPDTYCYNAVIKALCGRGLL 389
Query: 221 EETIELALRIFHKMESPDTYSCGNTIV--GFCRLGRLGAALEIFSQMNKIGVLPTRSAVN 278
EE L L + PD +C +TI+ CR G + A EIF+++ K G P+ + N
Sbjct: 390 EEGRSLQLEMSETESFPD--ACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFN 447
Query: 279 MLIGELCSLSEKKGSVEKVRVRNTRRPCTILVP-NMGGN--------SGAIQPAVEVFWA 329
LI LC E K + + RP ++ + + GN SG+I A
Sbjct: 448 ALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAH 507
Query: 330 VFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQ 389
++G P L++ CR G + A+KLL +++ + L+ Y ++ L +
Sbjct: 508 FADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGR 567
Query: 390 VEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVF-ELMNKKRCLPD 443
EEA LF + VY S+++ C + A ++ + + K CL D
Sbjct: 568 EEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDD 620
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 170/387 (43%), Gaps = 49/387 (12%)
Query: 165 KVSPKAMS--ICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEE 222
K+ P + + I L + G++++A + E+M+ V+GC P+ + +N ++ CK + +
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMK-VYGCSPNVVSYNTLIDGYCKLGGNGK 276
Query: 223 TIELALRIFHKME---SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNM 279
+ + +E SP+ + I GF + L ++++F +M V P + N
Sbjct: 277 MYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNS 336
Query: 280 LIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPST 339
LI LC N G I A+ + + ++G+ P+
Sbjct: 337 LINGLC------------------------------NGGKISEAISMRDKMVSAGVQPNL 366
Query: 340 FVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGR 399
L++ C+ +EA+ + V+ + Y +++ A C ++++ L
Sbjct: 367 ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEE 426
Query: 400 MLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKN 459
M G+ P +G YN +I+ LC GN++ A +F+ + K LPD +T+ L+ + +
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGE 485
Query: 460 WKVAYDLLMEMLGLGWIPELQTYNLV------DNLLREHDRSDLCLKLERKLE------N 507
+ A LL EM +G P TYN+V + L+ ++ ER+L N
Sbjct: 486 SRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYN 545
Query: 508 HQLQKLCKLGQLDAAYEKAKSMLEKGI 534
LQ + G+L+ A MLEKG+
Sbjct: 546 VLLQGYSQKGKLEDANMLLNEMLEKGL 572
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 133/323 (41%), Gaps = 35/323 (10%)
Query: 166 VSPK--AMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEET 223
VSP +I I + + ++ +F+EM KP+ + +N+++ LC E
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ-DVKPNVISYNSLINGLCNGGKISEA 350
Query: 224 IELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGE 283
I + ++ P+ + I GFC+ L AL++F + G +PT NMLI
Sbjct: 351 ISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDA 410
Query: 284 LCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVV 343
C L G I + + G++P
Sbjct: 411 YCKL------------------------------GKIDDGFALKEEMEREGIVPDVGTYN 440
Query: 344 KLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLAC 403
L++ LCR G E A KL + + L + + I+M+ C + +A+ L M
Sbjct: 441 CLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVT-FHILMEGYCRKGESRKAAMLLKEMSKM 499
Query: 404 GLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNL-TYTALIHAHGKVKNWKV 462
GLKP+ YN V+ C GNL A + M K+R L N+ +Y L+ + + +
Sbjct: 500 GLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLED 559
Query: 463 AYDLLMEMLGLGWIPELQTYNLV 485
A LL EML G +P TY +V
Sbjct: 560 ANMLLNEMLEKGLVPNRITYEIV 582
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 151/391 (38%), Gaps = 57/391 (14%)
Query: 196 TVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRL 255
+ CKP ++ L K+ S + + + + P+ ++ I C+ G++
Sbjct: 187 SALSCKP-------LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKM 239
Query: 256 GAALEIFSQMNKIGVLPTRSAVNMLIGELCSLS-----EKKGSVEKVRVRNTRRPCTILV 310
A ++ M G P + N LI C L K +V K V N P
Sbjct: 240 NKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSP----- 294
Query: 311 PNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKL 370
N ++ FW N LP + V K M ++ VK I
Sbjct: 295 -----NLTTFNILIDGFWKDDN---LPGSMKVFKEM--------LDQDVKPNVI------ 332
Query: 371 TCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMG 430
Y ++ LC+ ++ EA ++ +M++ G++P L YN++I+ C L A+
Sbjct: 333 -----SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALD 387
Query: 431 VFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLR 490
+F + + +P Y LI A+ K+ + L EM G +P++ TYN + L
Sbjct: 388 MFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLC 447
Query: 491 EHDRSDLCLKLERKLENHQLQKL----------CKLGQLDAAYEKAKSMLEKGIHLSAYA 540
+ + KL +L + L L C+ G+ A K M + G+
Sbjct: 448 RNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLT 507
Query: 541 RDTFEHVFQKNGKLKIA---RQLLETTRRVQ 568
+ + K G LK A R +E RR++
Sbjct: 508 YNIVMKGYCKEGNLKAATNMRTQMEKERRLR 538
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 178/442 (40%), Gaps = 56/442 (12%)
Query: 180 RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDT 239
R + +AL +F+ M C P+++ ++ +++ LC+ EE L ++ K P T
Sbjct: 242 RGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPST 301
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC---SLSEKKGSVEK 296
+ I C G + A +F +M G P +LI LC + E G K
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361
Query: 297 VRVRNTRRPCTIL---VPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLG 353
+ V++ P I + N G + PA E+ + P+ +LM LCR+G
Sbjct: 362 M-VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVG 420
Query: 354 QTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYN 413
+ +AV LL+ + + L+ Y +++ LC + A L M ++P +
Sbjct: 421 KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFT 480
Query: 414 SVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWK------------ 461
++I+ C G D A LM +K D +T T LI KV +
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKM 540
Query: 462 ----------VAYDLL---------MEMLG----LGWIPELQTYN-LVDNLLREHD---- 493
V D+L + MLG LG +P + TY LVD L+R D
Sbjct: 541 RILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGS 600
Query: 494 -RSDLCLKLERKLENHQ-----LQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHV 547
R +KL L N + LC+ G+++ A + +M + G+ +
Sbjct: 601 FRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKG 660
Query: 548 FQKNGKLKIARQLLETTRRVQE 569
+ NGKL A LET R + E
Sbjct: 661 YVNNGKLDRA---LETVRAMVE 679
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 166/413 (40%), Gaps = 69/413 (16%)
Query: 167 SPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIEL 226
S + ++ I+ L G I +A +LF+EM GCKP+ + ++ LC+ EE +
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEM-IPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 227 ALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCS 286
++ P + I G+C+ GR+ A E+ + M K P N L+ LC
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 287 LSEKKGSVEKVR--VRNTRRPCTI--------------------LVPNMGGNSGAIQPAV 324
+ + +V ++ + N P + L+ +M N I+P
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM--NCFDIEPDC 476
Query: 325 EVFWAVFNS--------------------GLLPSTFVVVKLMSELCRLGQTEEAVKLLRI 364
F A+ N+ G+ L+ +C++G+T +A+ +L
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILET 536
Query: 365 VEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGN 424
+ + ++ +++ L C+V+E + G++ GL P + Y +++ L G+
Sbjct: 537 LVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGD 596
Query: 425 LDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNL 484
+ + + ELM CLP+ YT +I+ + + A LL M G P TY +
Sbjct: 597 ITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTV 656
Query: 485 VDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLS 537
+ ++ G+LD A E ++M+E+G L+
Sbjct: 657 M------------------------VKGYVNNGKLDRALETVRAMVERGYELN 685
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 170/425 (40%), Gaps = 87/425 (20%)
Query: 191 FEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCG----NTI 246
F+E+ VFG + + ++++L L K LA + +ME+ D + G TI
Sbjct: 147 FDELREVFGFRLNYPCYSSLLMSLAKLDLGF----LAYVTYRRMEA-DGFVVGMIDYRTI 201
Query: 247 V-GFCRLGRLGAALEIFSQMNKIG-VLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRR 304
V C+ G AA S++ KIG VL + ++L+G C + +++ V +
Sbjct: 202 VNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLG-FCRGLNLRDALKVFDVMSKEV 260
Query: 305 PCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRI 364
C PN V +++ GL C +G+ EEA L
Sbjct: 261 TCA---PN------------SVSYSILIHGL--------------CEVGRLEEAFGLKDQ 291
Query: 365 VEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGN 424
+ E+ Y +++KALCD +++A NLF M+ G KP + Y +I LC G
Sbjct: 292 MGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGK 351
Query: 425 LDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLL----------------- 467
++ A GV M K R P +TY ALI+ + K A++LL
Sbjct: 352 IEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411
Query: 468 -ME-----------------MLGLGWIPELQTYN-LVDNLLREHDRSDL--------CLK 500
ME ML G P++ +YN L+D L RE + C
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFD 471
Query: 501 LERKLENHQ--LQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIAR 558
+E + CK G+ D A ML KGI L T K GK + A
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531
Query: 559 QLLET 563
+LET
Sbjct: 532 FILET 536
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 155/417 (37%), Gaps = 87/417 (20%)
Query: 180 RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDT 239
+ GR+ A L ME CKP+ FN ++ LC+ + + L R+ SPD
Sbjct: 383 KDGRVVPAFELLTVMEKR-ACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDI 441
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC-------------- 285
S I G CR G + A ++ S MN + P +I C
Sbjct: 442 VSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGL 501
Query: 286 ------SLSEKKGS--VEKV-RVRNTRRPCTIL-----------------VPNMGGNSGA 319
SL E G+ ++ V +V TR IL + +M
Sbjct: 502 MLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCK 561
Query: 320 IQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLT-CVEE--G 376
++ + + + GL+PS L+ L R G + RI+E KL+ C+
Sbjct: 562 VKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGS---FRILELMKLSGCLPNVYP 618
Query: 377 YAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMN 436
Y I++ LC +VEEA L M G+ P Y ++ G LD A+ M
Sbjct: 619 YTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMV 678
Query: 437 KKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDR-- 494
++ ++ Y++L+ +L I + + D LRE D
Sbjct: 679 ERGYELNDRIYSSLLQGF---------------VLSQKGIDNSEESTVSDIALRETDPEC 723
Query: 495 ---------------SDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHL 536
S LC+ L + +LCK G+ D + + +++LE+G+ L
Sbjct: 724 INELISVVEQLGGCISGLCIFL--------VTRLCKEGRTDESNDLVQNVLERGVFL 772
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 122/259 (47%), Gaps = 10/259 (3%)
Query: 166 VSPKAMS--ICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEET 223
+SP +S + I L R G ++ A L M F +PD L F ++ CK+ ++
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSM-NCFDIEPDCLTFTAIINAFCKQGKADVA 495
Query: 224 IELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGE 283
+ K S D + I G C++G+ AL I + K+ +L T ++N+++
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDM 555
Query: 284 L---CSLSEKK---GSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLP 337
L C + E+ G + K+ + + T LV + SG I + + + SG LP
Sbjct: 556 LSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLI-RSGDITGSFRILELMKLSGCLP 614
Query: 338 STFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLF 397
+ + +++ LC+ G+ EEA KLL +++ ++ Y +++K ++ +++ A
Sbjct: 615 NVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETV 674
Query: 398 GRMLACGLKPKLGVYNSVI 416
M+ G + +Y+S++
Sbjct: 675 RAMVERGYELNDRIYSSLL 693
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 179/420 (42%), Gaps = 39/420 (9%)
Query: 165 KVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVL---------- 214
K S + ++F GR G +H A FE M G P + ++ ++++
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRAR-GITPTSRIYTSLIHAYAVGRDMDEAL 364
Query: 215 -CKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPT 273
C ++ EE IE++L TYS + GF + G AA F + +I
Sbjct: 365 SCVRKMKEEGIEMSLV---------TYSV--IVGGFSKAGHAEAADYWFDEAKRIHKTLN 413
Query: 274 RSAVNMLIG---ELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNS--GAIQPAVEVFW 328
S +I + C++ + V ++ P I M G + + + VF
Sbjct: 414 ASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFK 473
Query: 329 AVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHC 388
+ G P+ L++ ++G+ +A+++ R+++E + + Y++++
Sbjct: 474 RLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLK 533
Query: 389 QVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYT 448
A +F M+ G+KP + +YN++IS C +GN+D A+ + M K R P T+
Sbjct: 534 DWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFM 593
Query: 449 ALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKL--- 505
+IH + K + + + ++ M G +P + T+N + N L E + + +++ ++
Sbjct: 594 PIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLA 653
Query: 506 ----ENHQ----LQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIA 557
H +Q +G A+E + +G+ + + + K+G+++ A
Sbjct: 654 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 713
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 133/310 (42%), Gaps = 9/310 (2%)
Query: 187 ALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTI 246
A ++FE+M G KPD +++NN++ C + + I+ + P T + I
Sbjct: 538 AFAVFEDM-VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 247 VGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVR------VR 300
G+ + G + +LE+F M + G +PT N LI L + + +VE + V
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656
Query: 301 NTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVK 360
T ++ + G A E F + N GL F L+ C+ G+ + A+
Sbjct: 657 ANEHTYTKIMQGYA-SVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALA 715
Query: 361 LLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLC 420
+ + + R + Y I++ V EA++L +M G+KP + Y S IS
Sbjct: 716 VTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACS 775
Query: 421 TLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQ 480
G+++ A E M P+ TYT LI + + A EM +G P+
Sbjct: 776 KAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKA 835
Query: 481 TYN-LVDNLL 489
Y+ L+ +LL
Sbjct: 836 VYHCLLTSLL 845
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/259 (18%), Positives = 107/259 (41%), Gaps = 6/259 (2%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
I + G + +L +F+ M GC P FN ++ L +K+ E+ +E+ +
Sbjct: 596 IHGYAKSGDMRRSLEVFDMMRRC-GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV 294
S + ++ + G+ +G G A E F+++ G+ L+ C + ++
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL 714
Query: 295 ---EKVRVRNTRRPCTI--LVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSEL 349
+++ RN R + ++ + G + A ++ + G+ P +S
Sbjct: 715 AVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISAC 774
Query: 350 CRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKL 409
+ G A + + +E + + Y ++K E+A + + M A G+KP
Sbjct: 775 SKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDK 834
Query: 410 GVYNSVISMLCTLGNLDHA 428
VY+ +++ L + ++ A
Sbjct: 835 AVYHCLLTSLLSRASIAEA 853
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 131/320 (40%), Gaps = 34/320 (10%)
Query: 163 KGKVSPKAMSICIRFLGRHGRIHEALSLFEEM-ETVFGCKPDNLVFNNVLYVLCKKQSSE 221
K K++PK + + L R G + E L+ EM E + PD FN ++ CK
Sbjct: 115 KYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVS--PDIYTFNTLVNGYCKLGYVV 172
Query: 222 ETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLI 281
E + + PD ++ + I G CR + AA ++F +M + G + LI
Sbjct: 173 EAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLI 232
Query: 282 GELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFV 341
L KK I A+ + + + P+
Sbjct: 233 YGL--FEAKK----------------------------IDEALSLLVKMKDDNCCPNVRT 262
Query: 342 VVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRML 401
L+ LC GQ EA+ L + + E + + Y +++++ C ++EAS L ML
Sbjct: 263 YTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHML 322
Query: 402 ACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWK 461
GL P + YN++I C N+ AMG+ M ++ +PD +TY LI N
Sbjct: 323 ENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLD 381
Query: 462 VAYDLLMEMLGLGWIPELQT 481
AY LL M G +P +T
Sbjct: 382 SAYRLLSLMEESGLVPNQRT 401
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 128/309 (41%), Gaps = 32/309 (10%)
Query: 246 IVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRP 305
+V FCR R G + EI ++ T N L+ L + G VE+++ T
Sbjct: 99 VVDFCRTMRKGDSFEIKYKL-------TPKCYNNLLSSL----ARFGLVEEMKRLYTEML 147
Query: 306 CTILVPNMGGNS---------GAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTE 356
++ P++ + G + A + + +G P F ++ CR + +
Sbjct: 148 EDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVD 207
Query: 357 EAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVI 416
A K+ + + + E Y ++ L + +++EA +L +M P + Y +I
Sbjct: 208 AAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLI 267
Query: 417 SMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWI 476
LC G AM +F+ M++ PD+ YT LI + A LL ML G +
Sbjct: 268 DALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLM 327
Query: 477 PELQTYN-LVDNLLREHDRSDLCLKLERKLENHQLQKL----------CKLGQLDAAYEK 525
P + TYN L+ +++ + L L + LE + + L C G LD+AY
Sbjct: 328 PNVITYNALIKGFCKKNVHKAMGL-LSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRL 386
Query: 526 AKSMLEKGI 534
M E G+
Sbjct: 387 LSLMEESGL 395
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 150/342 (43%), Gaps = 35/342 (10%)
Query: 147 KLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLV 206
KL + + L M + + + + + +I ++ +I EA ++ +M++ +G KPD +
Sbjct: 439 KLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQS-YGVKPDVVT 497
Query: 207 FNNVLYVLCKKQSSEETIELAL-RIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQM 265
FN + + S+ ++ + R+ H P+ +CG + G+C G++ AL F +M
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 266 NKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVE 325
++GV P N LI ++++ G E V + +E
Sbjct: 558 KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDL------------------------ME 593
Query: 326 VFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALC 385
F G+ P LM+ +G + ++ + E + ++I+ K
Sbjct: 594 EF------GVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYA 647
Query: 386 DHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNL 445
+ E+A + +M G++P + +Y +IS C+ G + AM V++ M L NL
Sbjct: 648 RAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNL 707
Query: 446 -TYTALIHAHGKVKN-WKVAYDLLMEMLGLGWIPELQTYNLV 485
TY LI G+ K WK A +LL +M G +P +T L+
Sbjct: 708 TTYETLIWGFGEAKQPWK-AEELLKDMEGKNVVPTRKTMQLI 748
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 140/313 (44%), Gaps = 12/313 (3%)
Query: 182 GRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYS 241
GR EA S+F + G KP + + ++ L +++ + L ++ PDT
Sbjct: 333 GRPQEAHSIFNTL-IEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTIL 391
Query: 242 CGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLI---GELCSLSEKKGSVEKV- 297
I G L A++IF +M + G PT S N LI G++ L E ++ +
Sbjct: 392 FNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMML 451
Query: 298 ---RVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQ 354
++ R C ILV N I+ A + + + + G+ P L R+G
Sbjct: 452 RDEMLQPNDRTCNILV-QAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGS 510
Query: 355 T--EEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVY 412
T E + + R++ + V IV C+ ++EEA F RM G+ P L V+
Sbjct: 511 TCTAEDMIIPRMLHNKVKPNVRTCGTIV-NGYCEEGKMEEALRFFYRMKELGVHPNLFVF 569
Query: 413 NSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLG 472
NS+I + ++D V +LM + PD +T++ L++A V + K ++ +ML
Sbjct: 570 NSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLE 629
Query: 473 LGWIPELQTYNLV 485
G P++ ++++
Sbjct: 630 GGIDPDIHAFSIL 642
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 142/341 (41%), Gaps = 26/341 (7%)
Query: 248 GFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC------SLSEKKGSVEKVRVRN 301
G GR A IF+ + + G P+ L+ L SL VEK N
Sbjct: 328 GLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEK----N 383
Query: 302 TRRPCTIL---VPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEA 358
+P TIL + N SG + A+++F + SG P+ L+ ++G+ EE+
Sbjct: 384 GLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEES 443
Query: 359 VKLLRI-VEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVIS 417
+LL + + + L + I+++A C+ ++EEA N+ +M + G+KP + +N++
Sbjct: 444 SRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAK 503
Query: 418 MLCTLGNLDHAMG-VFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWI 476
+G+ A + M + P+ T +++ + + + A M LG
Sbjct: 504 AYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVH 563
Query: 477 PELQTYN-LVDNLLREHDRS------DLCLKLERKLE----NHQLQKLCKLGQLDAAYEK 525
P L +N L+ L +D DL + K + + + +G + E
Sbjct: 564 PNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEI 623
Query: 526 AKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTRR 566
MLE GI +A + + G+ + A Q+L R+
Sbjct: 624 YTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRK 664
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 141/331 (42%), Gaps = 31/331 (9%)
Query: 180 RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES--- 236
+ G I +A +F+E+ T +P + FN ++ CK + +E R+ H+ME
Sbjct: 252 KEGNISDAQKVFDEI-TKRSLQPTVVSFNTLINGYCKVGNLDE----GFRLKHQMEKSRT 306
Query: 237 -PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLI------GELCSLSE 289
PD ++ I C+ ++ A +F +M K G++P LI GE+ + E
Sbjct: 307 RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKE 366
Query: 290 K------KGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVV 343
KG + + NT LV N G + A + + GL P
Sbjct: 367 SYQKMLSKGLQPDIVLYNT------LVNGFCKN-GDLVAARNIVDGMIRRGLRPDKITYT 419
Query: 344 KLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLAC 403
L+ CR G E A+++ + +++ + G++ ++ +C +V +A ML
Sbjct: 420 TLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
Query: 404 GLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVA 463
G+KP Y ++ C G+ + + M +P +TY L++ K+ K A
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Query: 464 YDLLMEMLGLGWIPELQTYNLVDNLLREHDR 494
LL ML +G +P+ TYN LL H R
Sbjct: 540 DMLLDAMLNIGVVPDDITYN---TLLEGHHR 567
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 102/472 (21%), Positives = 180/472 (38%), Gaps = 80/472 (16%)
Query: 119 FFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSI----- 173
FF + +Q GF+F +A FL ++F + + L+ V S+KGK S ++ I
Sbjct: 104 FFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEM 163
Query: 174 ----------------------------CIRFLGRH---------GRIHEALSLFEEMET 196
C R +H G + + + T
Sbjct: 164 RVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGT 223
Query: 197 VFGCK--------PDNL-VFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIV 247
++G P N+ VFN ++ CK+ + + ++ I + P S I
Sbjct: 224 IWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLIN 283
Query: 248 GFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGS---VEKVRVRNTRR 304
G+C++G L + QM K P + LI LC ++ G+ +++ R
Sbjct: 284 GYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIP 343
Query: 305 PCTILVPNMGGNS--GAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLL 362
I + G+S G I E + + + GL P + L++ C+ G A ++
Sbjct: 344 NDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIV 403
Query: 363 RIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTL 422
+ R L + Y ++ C VE A + M G++ +++++ +C
Sbjct: 404 DGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKE 463
Query: 423 GNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTY 482
G + A M + PD++TYT ++ A K + + + LL EM G +P + TY
Sbjct: 464 GRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTY 523
Query: 483 NLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGI 534
N++ L LCKLGQ+ A +ML G+
Sbjct: 524 NVL------------------------LNGLCKLGQMKNADMLLDAMLNIGV 551
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 117/262 (44%), Gaps = 12/262 (4%)
Query: 327 FWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCD 386
+ + ++G + +V LM++ C+ G +A K+ + +R L + ++ C
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287
Query: 387 HCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLT 446
++E L +M +P + Y+++I+ LC +D A G+F+ M K+ +P+++
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 447 YTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN-LVDNLLREHD----RSDLCLKL 501
+T LIH H + + + +ML G P++ YN LV+ + D R+ + +
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 502 ERKLENHQ------LQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLK 555
R L + + C+ G ++ A E K M + GI L K G++
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467
Query: 556 IA-RQLLETTRRVQEPEETNRT 576
A R L E R +P++ T
Sbjct: 468 DAERALREMLRAGIKPDDVTYT 489
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 157/401 (39%), Gaps = 83/401 (20%)
Query: 89 LDRYKGDLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKL 148
+D Y+ +N VL+ + Y L FF W Q GF+ D M LGR K
Sbjct: 329 IDAYQ----ANQVLKQMNDY-----GNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 149 FDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFN 208
F + LL + + + + I GR ++EA+++F +M+ GCKPD + +
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEA-GCKPDRVTYC 438
Query: 209 NVLYVLCKKQSSEETIELALRIFHKME----SPDTYSCGNTIVGFCRLGRLGAALEIFSQ 264
++ + K +++A+ ++ +M+ SPDT++ I + G L AA ++F +
Sbjct: 439 TLIDIHAKAG----FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 265 MNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAV 324
M G P N+++ + RN Q A+
Sbjct: 495 MVDQGCTPNLVTYNIMMD------------LHAKARN------------------YQNAL 524
Query: 325 EVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKAL 384
+++ + N+G P +M L G EEA + ++++ E Y +++
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Query: 385 CDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDN 444
VE+A + ML GL+P + NS++S
Sbjct: 585 GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL------------------------ 620
Query: 445 LTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLV 485
+V AY+LL ML LG P LQTY L+
Sbjct: 621 -----------RVNKIAEAYELLQNMLALGLRPSLQTYTLL 650
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 60/118 (50%)
Query: 390 VEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTA 449
+ EA N+F +M G KP Y ++I + G LD AM +++ M PD TY+
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 450 LIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLEN 507
+I+ GK + A+ L EM+ G P L TYN++ +L + LKL R ++N
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 121/270 (44%), Gaps = 16/270 (5%)
Query: 307 TILVPNMG--GNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRI 364
T +V N+G GAI ++ + G P+T +L+ R EA+ +
Sbjct: 368 TTMVGNLGRAKQFGAINKLLD---EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 365 VEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGN 424
++E Y ++ ++ A +++ RM A GL P Y+ +I+ L G+
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 425 LDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNL 484
L A +F M + C P+ +TY ++ H K +N++ A L +M G+ P+ TY++
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 485 VDNLLRE----HDRSDLCLKLERK--LENHQLQKLC-----KLGQLDAAYEKAKSMLEKG 533
V +L + + ++++K + + + L K G ++ A++ ++ML G
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 534 IHLSAYARDTFEHVFQKNGKLKIARQLLET 563
+ + ++ F + K+ A +LL+
Sbjct: 605 LRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 157/401 (39%), Gaps = 83/401 (20%)
Query: 89 LDRYKGDLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKL 148
+D Y+ +N VL+ + Y L FF W Q GF+ D M LGR K
Sbjct: 329 IDAYQ----ANQVLKQMNDY-----GNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 149 FDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFN 208
F + LL + + + + I GR ++EA+++F +M+ GCKPD + +
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEA-GCKPDRVTYC 438
Query: 209 NVLYVLCKKQSSEETIELALRIFHKME----SPDTYSCGNTIVGFCRLGRLGAALEIFSQ 264
++ + K +++A+ ++ +M+ SPDT++ I + G L AA ++F +
Sbjct: 439 TLIDIHAKAG----FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 265 MNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAV 324
M G P N+++ + RN Q A+
Sbjct: 495 MVDQGCTPNLVTYNIMMD------------LHAKARN------------------YQNAL 524
Query: 325 EVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKAL 384
+++ + N+G P +M L G EEA + ++++ E Y +++
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Query: 385 CDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDN 444
VE+A + ML GL+P + NS++S
Sbjct: 585 GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL------------------------ 620
Query: 445 LTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLV 485
+V AY+LL ML LG P LQTY L+
Sbjct: 621 -----------RVNKIAEAYELLQNMLALGLRPSLQTYTLL 650
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 60/118 (50%)
Query: 390 VEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTA 449
+ EA N+F +M G KP Y ++I + G LD AM +++ M PD TY+
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 450 LIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLEN 507
+I+ GK + A+ L EM+ G P L TYN++ +L + LKL R ++N
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 121/270 (44%), Gaps = 16/270 (5%)
Query: 307 TILVPNMG--GNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRI 364
T +V N+G GAI ++ + G P+T +L+ R EA+ +
Sbjct: 368 TTMVGNLGRAKQFGAINKLLD---EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 365 VEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGN 424
++E Y ++ ++ A +++ RM A GL P Y+ +I+ L G+
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 425 LDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNL 484
L A +F M + C P+ +TY ++ H K +N++ A L +M G+ P+ TY++
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 485 VDNLLRE----HDRSDLCLKLERK--LENHQLQKLC-----KLGQLDAAYEKAKSMLEKG 533
V +L + + ++++K + + + L K G ++ A++ ++ML G
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 534 IHLSAYARDTFEHVFQKNGKLKIARQLLET 563
+ + ++ F + K+ A +LL+
Sbjct: 605 LRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 157/401 (39%), Gaps = 83/401 (20%)
Query: 89 LDRYKGDLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKL 148
+D Y+ +N VL+ + Y L FF W Q GF+ D M LGR K
Sbjct: 329 IDAYQ----ANQVLKQMNDY-----GNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 149 FDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFN 208
F + LL + + + + I GR ++EA+++F +M+ GCKPD + +
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEA-GCKPDRVTYC 438
Query: 209 NVLYVLCKKQSSEETIELALRIFHKME----SPDTYSCGNTIVGFCRLGRLGAALEIFSQ 264
++ + K +++A+ ++ +M+ SPDT++ I + G L AA ++F +
Sbjct: 439 TLIDIHAKAG----FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 265 MNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAV 324
M G P N+++ + RN Q A+
Sbjct: 495 MVDQGCTPNLVTYNIMMD------------LHAKARN------------------YQNAL 524
Query: 325 EVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKAL 384
+++ + N+G P +M L G EEA + ++++ E Y +++
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Query: 385 CDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDN 444
VE+A + ML GL+P + NS++S
Sbjct: 585 GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL------------------------ 620
Query: 445 LTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLV 485
+V AY+LL ML LG P LQTY L+
Sbjct: 621 -----------RVNKIAEAYELLQNMLALGLRPSLQTYTLL 650
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 60/118 (50%)
Query: 390 VEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTA 449
+ EA N+F +M G KP Y ++I + G LD AM +++ M PD TY+
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 450 LIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLEN 507
+I+ GK + A+ L EM+ G P L TYN++ +L + LKL R ++N
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 121/270 (44%), Gaps = 16/270 (5%)
Query: 307 TILVPNMG--GNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRI 364
T +V N+G GAI ++ + G P+T +L+ R EA+ +
Sbjct: 368 TTMVGNLGRAKQFGAINKLLD---EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 365 VEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGN 424
++E Y ++ ++ A +++ RM A GL P Y+ +I+ L G+
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 425 LDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNL 484
L A +F M + C P+ +TY ++ H K +N++ A L +M G+ P+ TY++
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 485 VDNLLRE----HDRSDLCLKLERK--LENHQLQKLC-----KLGQLDAAYEKAKSMLEKG 533
V +L + + ++++K + + + L K G ++ A++ ++ML G
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 534 IHLSAYARDTFEHVFQKNGKLKIARQLLET 563
+ + ++ F + K+ A +LL+
Sbjct: 605 LRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 170/412 (41%), Gaps = 23/412 (5%)
Query: 95 DLSSNFVLRVLMSYQHLGRAKTLN--FFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDM 152
DL ++RVL G A L FF WA Q G+ V + M L + + F +
Sbjct: 94 DLRPGLIIRVL---SRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAV 150
Query: 153 KCLLMTVASQKGK-VSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVL 211
L+ + + + P+ + +R + +A+ + +EM +G +PD VF +L
Sbjct: 151 WGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPK-YGLEPDEYVFGCLL 209
Query: 212 YVLCKKQSSEETIELALRIFHKMES---PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKI 268
LCK S +E A ++F M P+ + + G+CR G+L A E+ QM +
Sbjct: 210 DALCKNGSVKE----ASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEA 265
Query: 269 GVLPTRSAVNMLI------GELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQP 322
G+ P L+ G++ + + K T+L+ + +
Sbjct: 266 GLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDE 325
Query: 323 AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMK 382
A+ VF + G L+S C+ G ++ +L + ++ + + Y +M
Sbjct: 326 AMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMV 385
Query: 383 ALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLP 442
A Q EE L +M G P L +YN VI + C LG + A+ ++ M P
Sbjct: 386 AHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSP 445
Query: 443 DNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWI--PELQTY-NLVDNLLRE 491
T+ +I+ A + EM+ G P+ T +L++NL+R+
Sbjct: 446 GVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRD 497
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 107/261 (40%), Gaps = 15/261 (5%)
Query: 318 GAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGY 377
GA+ +E + P FVV LM ++AV++L + + L E +
Sbjct: 148 GAVWGLIEEMRKTNPELIEPELFVV--LMRRFASANMVKKAVEVLDEMPKYGLEPDEYVF 205
Query: 378 AIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNK 437
++ ALC + V+EAS +F M P L + S++ C G L A V M +
Sbjct: 206 GCLLDALCKNGSVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKE 264
Query: 438 KRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN-LVDNLLREHDRSD 496
PD + +T L+ + AYDL+ +M G+ P + Y L+ L R R D
Sbjct: 265 AGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMD 324
Query: 497 LCLKLERKLENHQ-----------LQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFE 545
+++ ++E + + CK G +D Y M +KG+ S
Sbjct: 325 EAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIM 384
Query: 546 HVFQKNGKLKIARQLLETTRR 566
+K + + +L+E +R
Sbjct: 385 VAHEKKEQFEECLELIEKMKR 405
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 121/316 (38%), Gaps = 48/316 (15%)
Query: 249 FCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTI 308
F + A+E+ +M K G+ P L+ LC
Sbjct: 177 FASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCK---------------------- 214
Query: 309 LVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEER 368
+G+++ A +VF P+ L+ CR G+ EA ++L ++E
Sbjct: 215 --------NGSVKEASKVF-EDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEA 265
Query: 369 KLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLC-TLGNLDH 427
L + ++ ++ +A +L M G +P + Y +I LC T +D
Sbjct: 266 GLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDE 325
Query: 428 AMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDN 487
AM VF M + C D +TYTALI K Y +L +M G +P TY +
Sbjct: 326 AMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMV 385
Query: 488 LLREHDRSDLCLKLERKLE-----------NHQLQKLCKLGQLDAAYEKAKSMLEKGIHL 536
+ ++ + CL+L K++ N ++ CKLG++ A M G+
Sbjct: 386 AHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSP 445
Query: 537 SAYARDTFEHVFQKNG 552
DTF V NG
Sbjct: 446 GV---DTF--VIMING 456
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 113/508 (22%), Positives = 202/508 (39%), Gaps = 57/508 (11%)
Query: 97 SSNFVLRVLMSYQHLGRAKTL-NFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCL 155
S N +L + + + ++L +F AG Q + +++ ++K F+ +
Sbjct: 116 SYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSC----KKKEFEKARGF 171
Query: 156 LMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLC 215
L + + K + S I L + G++ +AL LF+EM G PD +N ++
Sbjct: 172 LDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSER-GVAPDVTCYNILIDGFL 230
Query: 216 KKQSSEETIEL--------------------------------ALRIFHKMES----PDT 239
K++ + +EL L+I+ +M+ D
Sbjct: 231 KEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDL 290
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRV 299
Y+ + I G C G + A +F+++++ N ++G C + K S+E R+
Sbjct: 291 YTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRI 350
Query: 300 RNTRRPCTILVPNM--GG--NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQT 355
+ I+ N+ G +G I A ++ + G + LC G
Sbjct: 351 MEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYV 410
Query: 356 EEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSV 415
+A+ +++ VE YA ++ LC ++EEASNL M G++ V N++
Sbjct: 411 NKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNAL 470
Query: 416 ISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGW 475
I L L A M K C P ++Y LI K + A + EML GW
Sbjct: 471 IGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGW 530
Query: 476 IPELQTYNLVDNLLREHDRSDLCLKLERK-----------LENHQLQKLCKLGQLDAAYE 524
P+L+TY+++ L + DL L+L + + N + LC +G+LD A
Sbjct: 531 KPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMT 590
Query: 525 KAKSMLEKGIHLSAYARDTFEHVFQKNG 552
+M + + +T F K G
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGFFKVG 618
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 138/310 (44%), Gaps = 9/310 (2%)
Query: 151 DMKCLLMTVASQKGKVSPKA-MSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNN 209
D ++ + KG + K I I L +G +++AL + +E+E+ G D + +
Sbjct: 376 DEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS-GGHLDVYAYAS 434
Query: 210 VLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIG 269
++ LCKK+ EE L + +++ C I G R RLG A +M K G
Sbjct: 435 IIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG 494
Query: 270 VLPTRSAVNMLIGELCSLSE--KKGSVEKVRVRNTRRP----CTILVPNMGGNSGAIQPA 323
PT + N+LI LC + + + K + N +P +IL+ + + I A
Sbjct: 495 CRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDR-KIDLA 553
Query: 324 VEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKA 383
+E++ SGL + L+ LC +G+ ++A+ ++ +E R T Y +M+
Sbjct: 554 LELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEG 613
Query: 384 LCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPD 443
A+ ++G M GL+P + YN+++ LC + +AM F+ P
Sbjct: 614 FFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPT 673
Query: 444 NLTYTALIHA 453
T+ L+ A
Sbjct: 674 VYTWNILVRA 683
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 112/527 (21%), Positives = 198/527 (37%), Gaps = 94/527 (17%)
Query: 96 LSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCL 155
LS VL++L S ++ A L F A G+ V ++ L ++ + + +
Sbjct: 8 LSPKHVLKLLKSEKNPRAAFAL--FDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRI 65
Query: 156 LMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVL- 214
+ + SQ+ K I+ G++ +AL +F+ M +FGC+P +N +L
Sbjct: 66 VELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFV 125
Query: 215 ----------------------------------CKKQSSEETIELALRIFHKMESPDTY 240
CKK+ E+ ++ + PD +
Sbjct: 126 EAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVF 185
Query: 241 SCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVE----- 295
S I + G+L ALE+F +M++ GV P + N+LI + K ++E
Sbjct: 186 SYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL 245
Query: 296 --------KVRVRNTR----------RPCTILVPNMGGN------------------SGA 319
V+ N C + M N +G
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305
Query: 320 IQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAI 379
+ A VF + ++ CR G+ +E+++L RI+E + + Y I
Sbjct: 306 VDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNI-VSYNI 364
Query: 380 VMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKR 439
++K L ++ +++EA+ ++ M A G Y I LC G ++ A+GV + +
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG 424
Query: 440 CLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTY---NLVDNLLREHDRSD 496
D Y ++I K K + A +L+ EM G EL ++ L+ L+R+ +
Sbjct: 425 GHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHG--VELNSHVCNALIGGLIRDSRLGE 482
Query: 497 LCLKLERKLENH----------QLQKLCKLGQLDAAYEKAKSMLEKG 533
L +N + LCK G+ A K MLE G
Sbjct: 483 ASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENG 529
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 142/335 (42%), Gaps = 41/335 (12%)
Query: 156 LMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLC 215
L + K V+ + +I I+ L +G+I EA ++ M G D + ++ LC
Sbjct: 347 LWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAK-GYAADKTTYGIFIHGLC 405
Query: 216 KKQSSEETIELALRIFHKMESP----DTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVL 271
+ AL + ++ES D Y+ + I C+ RL A + +M+K GV
Sbjct: 406 VNG----YVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVE 461
Query: 272 PTRSAVNMLIGELCSLSEKKGSVEKVRVRNTR-RPCTILVPNMGGNSGAIQPAVEVFWAV 330
N LIG L +R++R + + MG N
Sbjct: 462 LNSHVCNALIGGL--------------IRDSRLGEASFFLREMGKN-------------- 493
Query: 331 FNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQV 390
G P+ L+ LC+ G+ EA ++ + E + Y+I++ LC ++
Sbjct: 494 ---GCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKI 550
Query: 391 EEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTAL 450
+ A L+ + L GL+ + ++N +I LC++G LD AM V M + C + +TY L
Sbjct: 551 DLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTL 610
Query: 451 IHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLV 485
+ KV + A + M +G P++ +YN +
Sbjct: 611 MEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTI 645
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 15/212 (7%)
Query: 375 EGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFEL 434
+ Y +++K C + E+A M G KP + Y++VI+ L G LD A+ +F+
Sbjct: 150 QTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDE 209
Query: 435 MNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWI-PELQTYNLVDNLLREHD 493
M+++ PD Y LI K K+ K A +L +L + P ++T+N++ + L +
Sbjct: 210 MSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCG 269
Query: 494 RSDLCLKLERKLENHQLQK-----------LCKLGQLDAAYEKAKSMLEKGIHLSAYARD 542
R D CLK+ +++ ++ +K LC G +D A + E+ + +
Sbjct: 270 RVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYN 329
Query: 543 TFEHVFQKNGKLKIARQLLETTRRVQEPEETN 574
T F + GK+K + LE R ++ N
Sbjct: 330 TMLGGFCRCGKIK---ESLELWRIMEHKNSVN 358
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/438 (20%), Positives = 176/438 (40%), Gaps = 22/438 (5%)
Query: 149 FDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFN 208
FDD L + + S + + + + + + L+ +ME + G D F
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENL-GISHDLYSFT 118
Query: 209 NVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKI 268
+++ C+ + L ++ P + G+ + GFC+ R A+ + M+
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 269 GVLPTRSAVNMLIGELCSLSEKKGSVE------KVRVRNTRRPCTILVPNMGGNSGAIQP 322
G +P N +I LC + ++E K +R L+ + NSG
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLS-NSGRWTD 237
Query: 323 AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMK 382
A + + + P+ L+ + G EA L + + R + Y ++
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 383 ALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLP 442
C H + +A +F M++ G P + YN++I+ C ++ M +F M + +
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 443 DNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLE 502
D TY LIH + + VA + M+ G P++ TYN++ + L + + + L +
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417
Query: 503 RKLE-----------NHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKN 551
L+ N +Q LC+ +L A+ +S+ KG+ A A T +
Sbjct: 418 EDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 477
Query: 552 GKLKIARQLLETTRRVQE 569
G + R+ + RR++E
Sbjct: 478 G---LQREADKLCRRMKE 492
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 134/358 (37%), Gaps = 60/358 (16%)
Query: 183 RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES----PD 238
R EA+SL + M+ FG P+ +++N V+ LCK + + AL +F+ ME D
Sbjct: 164 RFQEAVSLVDSMDG-FGFVPNVVIYNTVINGLCKNRD----LNNALEVFYCMEKKGIRAD 218
Query: 239 TYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVR 298
+ I G GR A + M K + P LI K+G++ + R
Sbjct: 219 AVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV----KEGNLLEAR 274
Query: 299 VRNTRRPCTILVPNM-GGNS--------GAIQPAVEVFWAVFNSGLLPSTFVVVKLMSEL 349
+VPN+ NS G + A +F + + G P L++
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 350 CRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKL 409
C+ + E+ +KL + + L Y ++ C ++ A +F RM+ CG+ P +
Sbjct: 335 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 394
Query: 410 GVYNS-----------------------------------VISMLCTLGNLDHAMGVFEL 434
YN +I LC L A +F
Sbjct: 395 VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 454
Query: 435 MNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREH 492
+ +K PD + Y +I + + A L M G++P + Y D LR+H
Sbjct: 455 LTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY---DETLRDH 509
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 138/349 (39%), Gaps = 24/349 (6%)
Query: 121 SWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMS--ICIRFL 178
S + GF F +VV Y G K D L + +K + A++ I L
Sbjct: 170 SLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGL 229
Query: 179 GRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPD 238
GR +A L +M P+ + F ++ K+ + E L + + P+
Sbjct: 230 SNSGRWTDAARLLRDMVKR-KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN 288
Query: 239 TYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVR 298
++ + I GFC G LG A +F M G P N LI C K VE
Sbjct: 289 VFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFC----KSKRVED-- 342
Query: 299 VRNTRRPCTILVPNMGGNS-------------GAIQPAVEVFWAVFNSGLLPSTFVVVKL 345
+ C + + G++ G + A +VF + + G+ P L
Sbjct: 343 --GMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400
Query: 346 MSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGL 405
+ LC G+ E+A+ ++ +++ ++ Y I+++ LC +++EA LF + G+
Sbjct: 401 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Query: 406 KPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAH 454
KP Y ++IS LC G A + M + +P Y + H
Sbjct: 461 KPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 509
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 188/441 (42%), Gaps = 64/441 (14%)
Query: 116 TLNFFSWAGTQMGFQFDDS--VVEYMA-----DFLGRRKLFDDMKCLLMTVASQKGKVSP 168
L+ F WA Q + D VV + DF+G + LF++M + +S G +S
Sbjct: 188 ALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEM----VQDSSSHGDLSF 243
Query: 169 KAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELAL 228
A + I++L + ++ A F++ + GCK D +NN++ + K + E
Sbjct: 244 NAYNQVIQYLAKAEKLEVAFCCFKKAQES-GCKIDTQTYNNLMMLFLNKGLPYKAFE--- 299
Query: 229 RIFHKMESPDTYSCGNT----IVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGEL 284
I+ ME D+ G+T I + GRL AA ++F QM + + P+ S + L+ +
Sbjct: 300 -IYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSM 358
Query: 285 CSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVK 344
G +G + +++V+ + G PS + V
Sbjct: 359 ------------------------------GKAGRLDTSMKVYMEMQGFGHRPSATMFVS 388
Query: 345 LMSELCRLGQTEEAVKLLRIVEERKLTCVEEG---YAIVMKALCDHCQVEEASNLFGRML 401
L+ + G+ + A LR+ +E K + Y +++++ ++E A +F M
Sbjct: 389 LIDSYAKAGKLDTA---LRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDME 445
Query: 402 ACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWK 461
G P Y+ ++ M G +D AM ++ M P +Y +L+ +
Sbjct: 446 KAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVD 505
Query: 462 VAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLER-------KLENHQLQKLC 514
VA +L+EM +G+ ++ +++ +++ DL LK R K N +++L
Sbjct: 506 VAGKILLEMKAMGYSVDVCASDVLMIYIKDAS-VDLALKWLRFMGSSGIKTNNFIIRQLF 564
Query: 515 KLGQLDAAYEKAKSMLEKGIH 535
+ + Y+ A+ +LE +H
Sbjct: 565 ESCMKNGLYDSARPLLETLVH 585
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 151/344 (43%), Gaps = 29/344 (8%)
Query: 182 GRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETI----ELALRIFHKMESP 237
GRI A + EM++ G +PD +N +L +C + + E + E+ L P
Sbjct: 274 GRIEGARLIISEMKSK-GFQPDMQTYNPILSWMCNEGRASEVLREMKEIGL-------VP 325
Query: 238 DTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKV 297
D+ S I G G L A +M K G++PT N LI L E K ++
Sbjct: 326 DSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGL--FMENKIEAAEI 383
Query: 298 RVRNTRRPCTIL-------VPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELC 350
+R R +L + N G + A + + G+ P+ F L+ LC
Sbjct: 384 LIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLC 443
Query: 351 RLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCD-HCQV---EEASNLFGRMLACGLK 406
R +T EA +L V + + + ++M L D HC + + A +L M +
Sbjct: 444 RKNKTREADELFEKVVGKGM----KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSIN 499
Query: 407 PKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDL 466
P YN ++ LC G + A + M ++ PD+++Y LI + K + K A+ +
Sbjct: 500 PDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMV 559
Query: 467 LMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQL 510
EML LG+ P L TYN + L ++ +L +L R++++ +
Sbjct: 560 RDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGI 603
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 155/390 (39%), Gaps = 66/390 (16%)
Query: 172 SICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIF 231
+I I L + G++ +A ME VFG KP + +N L + S IE A I
Sbjct: 229 NIMINVLCKEGKLKKAKGFLGIME-VFGIKPTIVTYN----TLVQGFSLRGRIEGARLII 283
Query: 232 HKMES----PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSL 287
+M+S PD + + C GR A E+ +M +IG++P + N+LI
Sbjct: 284 SEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILI------ 334
Query: 288 SEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMS 347
R C+ N+G ++ A + G++P+ + L+
Sbjct: 335 ----------------RGCS--------NNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH 370
Query: 348 ELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKP 407
L + E A L+R + E+ + Y I++ C H ++A L M+ G++P
Sbjct: 371 GLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQP 430
Query: 408 KLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLL 467
Y S+I +LC A +FE + K PD + L+ H + N A+ LL
Sbjct: 431 TQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490
Query: 468 MEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAK 527
EM + P+ TYN CL ++ LC G+ + A E
Sbjct: 491 KEMDMMSINPDDVTYN--------------CL----------MRGLCGEGKFEEARELMG 526
Query: 528 SMLEKGIHLSAYARDTFEHVFQKNGKLKIA 557
M +GI + +T + K G K A
Sbjct: 527 EMKRRGIKPDHISYNTLISGYSKKGDTKHA 556
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 132/325 (40%), Gaps = 46/325 (14%)
Query: 250 CRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTIL 309
C+L + A+E F M + G P N ++ L L+ R+ N
Sbjct: 166 CQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLN---------RIENAW------ 210
Query: 310 VPNMGGNSGAIQPAVEVFWA-VFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEER 368
VF+A ++ + + + +++ LC+ G+ ++A L I+E
Sbjct: 211 ----------------VFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVF 254
Query: 369 KLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHA 428
+ Y +++ ++E A + M + G +P + YN ++S +C G A
Sbjct: 255 GIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RA 311
Query: 429 MGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN-LVDN 487
V M + +PD+++Y LI + ++A+ EM+ G +P TYN L+
Sbjct: 312 SEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHG 371
Query: 488 LLREH--DRSDLCLK--------LERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLS 537
L E+ + +++ ++ L+ N + C+ G A+ M+ GI +
Sbjct: 372 LFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPT 431
Query: 538 AYARDTFEHVFQKNGKLKIARQLLE 562
+ + +V + K + A +L E
Sbjct: 432 QFTYTSLIYVLCRKNKTREADELFE 456
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 157/401 (39%), Gaps = 83/401 (20%)
Query: 89 LDRYKGDLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKL 148
+D Y+ +N VL+ + +Y A L FF W Q GF+ D M LGR K
Sbjct: 324 MDAYQ----ANQVLKQMDNY-----ANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ 374
Query: 149 FDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFN 208
F ++ LL + K + + I GR + EA+++F +M+ GC+PD + +
Sbjct: 375 FGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEA-GCEPDRVTYC 433
Query: 209 NVLYVLCKKQSSEETIELALRIFHKME----SPDTYSCGNTIVGFCRLGRLGAALEIFSQ 264
++ + K +++A+ ++ +M+ SPDT++ I + G L AA +F +
Sbjct: 434 TLIDIHAKAG----FLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCE 489
Query: 265 MNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAV 324
M G P N++I + RN + A+
Sbjct: 490 MVGQGCTPNLVTFNIMI------------ALHAKARN------------------YETAL 519
Query: 325 EVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKAL 384
+++ + N+G P +M L G EEA + ++ + E Y +++
Sbjct: 520 KLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLW 579
Query: 385 CDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDN 444
V++A + ML GL+P + NS++S
Sbjct: 580 GKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFL------------------------ 615
Query: 445 LTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLV 485
+V AY+LL ML LG P LQTY L+
Sbjct: 616 -----------RVHRMSEAYNLLQSMLALGLHPSLQTYTLL 645
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 81/185 (43%)
Query: 327 FWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCD 386
+W G ++ L R Q E KLL + Y ++ +
Sbjct: 347 YWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGR 406
Query: 387 HCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLT 446
++EA N+F +M G +P Y ++I + G LD AM +++ M + PD T
Sbjct: 407 ANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFT 466
Query: 447 YTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLE 506
Y+ +I+ GK + A+ L EM+G G P L T+N++ L + + LKL R ++
Sbjct: 467 YSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQ 526
Query: 507 NHQLQ 511
N Q
Sbjct: 527 NAGFQ 531
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 110/241 (45%), Gaps = 11/241 (4%)
Query: 334 GLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEA 393
G P+T +L+ R +EA+ + ++E Y ++ ++ A
Sbjct: 389 GCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIA 448
Query: 394 SNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHA 453
+++ RM GL P Y+ +I+ L G+L A +F M + C P+ +T+ +I
Sbjct: 449 MDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIAL 508
Query: 454 HGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLRE----HDRSDLCLKLERK--LEN 507
H K +N++ A L +M G+ P+ TY++V +L + + +++RK + +
Sbjct: 509 HAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPD 568
Query: 508 HQLQKLC-----KLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLE 562
+ L K G +D A++ ++ML+ G+ + ++ F + ++ A LL+
Sbjct: 569 EPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQ 628
Query: 563 T 563
+
Sbjct: 629 S 629
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 106/253 (41%), Gaps = 14/253 (5%)
Query: 299 VRNTRRPCTILVPNM---GGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQT 355
VR+ +P T+ + G + ++ A+ VF + +G P L+ + G
Sbjct: 386 VRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFL 445
Query: 356 EEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSV 415
+ A+ + + ++E L+ Y++++ L + A LF M+ G P L +N +
Sbjct: 446 DIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIM 505
Query: 416 ISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGW 475
I++ N + A+ ++ M PD +TY+ ++ G + A + EM W
Sbjct: 506 IALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNW 565
Query: 476 IPELQTYNLVDNLLREHDRSDLCLKLERKLE-----------NHQLQKLCKLGQLDAAYE 524
+P+ Y L+ +L + D + + + N L ++ ++ AY
Sbjct: 566 VPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYN 625
Query: 525 KAKSMLEKGIHLS 537
+SML G+H S
Sbjct: 626 LLQSMLALGLHPS 638
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 169/429 (39%), Gaps = 66/429 (15%)
Query: 176 RFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKME 235
R L G+ +A S+ EM G PD ++ VL LC +ELA +F +M+
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQ-GFIPDTSTYSKVLNYLCNASK----MELAFLLFEEMK 510
Query: 236 S----PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKK 291
D Y+ + FC+ G + A + F++M ++G P LI L KK
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY--LKAKK 568
Query: 292 GSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCR 351
+ A E+F + + G LP+ L+ C+
Sbjct: 569 ----------------------------VSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 352 LGQTEEAVKLL-RIVEERKLTCVEE---------------GYAIVMKALCDHCQVEEASN 395
GQ E+A ++ R+ + + V+ Y ++ C +VEEA
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660
Query: 396 LFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHG 455
L M G +P VY+++I LC +G LD A V M++ TY++LI +
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720
Query: 456 KVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQK--- 512
KVK +A +L +ML P + Y + + L + ++D KL + +E Q
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 780
Query: 513 --------LCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETT 564
+G+++ E + M KG+ + KNG L +A LLE
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Query: 565 RRVQEPEET 573
++ P T
Sbjct: 841 KQTHWPTHT 849
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 184/475 (38%), Gaps = 102/475 (21%)
Query: 170 AMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALR 229
A S+C + G+ EAL+L E V PD + + ++ LC+ EE ++ R
Sbjct: 277 AYSLC-----KVGKWREALTLVETENFV----PDTVFYTKLISGLCEASLFEEAMDFLNR 327
Query: 230 IFHKMESPD--TYS---CG-----------------------------NTIV-GFCRLGR 254
+ P+ TYS CG N++V +C G
Sbjct: 328 MRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGD 387
Query: 255 LGAALEIFSQMNKIGVLPTRSAVNMLIGELC-----------SLSEKKGS--------VE 295
A ++ +M K G +P N+LIG +C L+EK S +
Sbjct: 388 HSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLN 447
Query: 296 KVRVRN-TRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQ 354
K+ V + TR C+ +G + A V + G +P T K+++ LC +
Sbjct: 448 KINVSSFTRCLCS---------AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK 498
Query: 355 TEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNS 414
E A L ++ L Y I++ + C +E+A F M G P + Y +
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558
Query: 415 VISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLG 474
+I + +A +FE M + CLP+ +TY+ALI H K + A + M G
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 475 WIPELQTY-----------------NLVDNLLREHDRSDLCLKLERKL-----ENHQ--- 509
+P++ Y L+D + H R + KL + E +Q
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH-RVEEARKLLDAMSMEGCEPNQIVY 677
Query: 510 ---LQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLL 561
+ LCK+G+LD A E M E G + Y + + K + +A ++L
Sbjct: 678 DALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 732
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 137/320 (42%), Gaps = 22/320 (6%)
Query: 172 SICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIF 231
+I + + G I +A F EM V GC P+ + + +++ K + EL +
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREV-GCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 232 HKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKK 291
+ P+ + I G C+ G++ A +IF +M +P V+M
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD---VDMYF---------- 627
Query: 292 GSVEKVRVRNTRRPCTILVPNMGGN---SGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSE 348
K N+ RP + + S ++ A ++ A+ G P+ V L+
Sbjct: 628 ----KQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDG 683
Query: 349 LCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPK 408
LC++G+ +EA ++ + E Y+ ++ + + AS + +ML P
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743
Query: 409 LGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLM 468
+ +Y +I LC +G D A + ++M +K C P+ +TYTA+I G + + +LL
Sbjct: 744 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLE 803
Query: 469 EMLGLGWIPELQTYN-LVDN 487
M G P TY L+D+
Sbjct: 804 RMGSKGVAPNYVTYRVLIDH 823
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 110/500 (22%), Positives = 186/500 (37%), Gaps = 94/500 (18%)
Query: 89 LDRYKGDLSSNFVLRVLMSYQHLGR-AKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRK 147
L +++ LS + V+ VL + + R + ++FF WAG Q+G++ V + D + R
Sbjct: 123 LRQFREKLSESLVIEVL---RLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRD- 178
Query: 148 LFDDMKC---LLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALS--------LFEEMET 196
DD K L + +V + +++ +R R+G AL F +
Sbjct: 179 --DDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRS 236
Query: 197 VFGC--------------------------KPDNLVFNNVLYVLCKKQSSEETIELALRI 230
+ C + D Y LCK E + L +
Sbjct: 237 TYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL---V 293
Query: 231 FHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPT----------------- 273
+ PDT I G C A++ ++M LP
Sbjct: 294 ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 353
Query: 274 ---RSAVNMLIGELCSLSEK-----------------KGSVEKVRVRNTRRP----CTIL 309
+ +NM++ E C S K + K V+ P IL
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413
Query: 310 VPNMGG-----NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRI 364
+ ++ G N + A + + + +G++ + V LC G+ E+A ++R
Sbjct: 414 IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473
Query: 365 VEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGN 424
+ + Y+ V+ LC+ ++E A LF M GL + Y ++ C G
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 425 LDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN- 483
++ A F M + C P+ +TYTALIHA+ K K A +L ML G +P + TY+
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 484 LVDNLLREHDRSDLCLKLER 503
L+D + C ER
Sbjct: 594 LIDGHCKAGQVEKACQIFER 613
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 169/398 (42%), Gaps = 61/398 (15%)
Query: 183 RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM-------- 234
++ A LFE M + GC P+ + ++ ++ CK +E A +IF +M
Sbjct: 568 KVSYANELFETMLSE-GCLPNIVTYSALIDGHCKAGQ----VEKACQIFERMCGSKDVPD 622
Query: 235 ------------ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIG 282
E P+ + G + GFC+ R+ A ++ M+ G P + + LI
Sbjct: 623 VDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALID 682
Query: 283 ELCSLSEKKGSVE-KVRVRNTRRPCTILV-PNMGGNSGAIQP---AVEVFWAVFNSGLLP 337
LC + + + E K + P T+ ++ ++ A +V + + P
Sbjct: 683 GLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAP 742
Query: 338 STFVVVKLMSELCRLGQTEEAVKLLRIVEER-------KLTCVEEGYAIVMKALCDHCQV 390
+ + +++ LC++G+T+EA KL++++EE+ T + +G+ ++ K +
Sbjct: 743 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK-------I 795
Query: 391 EEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTAL 450
E L RM + G+ P Y +I C G LD A + E M + Y +
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855
Query: 451 IHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNL-VDNLLREHDRSDLCLKLERKLE--- 506
I G K + + LL E+ P L Y L +DNL++ R ++ L+L ++
Sbjct: 856 IE--GFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQ-RLEMALRLLEEVATFS 912
Query: 507 ----------NHQLQKLCKLGQLDAAYEKAKSMLEKGI 534
N ++ LC +++ A++ M +KG+
Sbjct: 913 ATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGV 950
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 22/236 (9%)
Query: 349 LCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPK 408
LC++G+ EA L +VE Y ++ LC+ EEA + RM A P
Sbjct: 280 LCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPN 336
Query: 409 LGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLM 468
+ Y++++ L V +M + C P + +L+HA+ + AY LL
Sbjct: 337 VVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK 396
Query: 469 EMLGLGWIPELQTYN-LVDNLLREHD--RSDLCLKLERKLENHQLQK------------- 512
+M+ G +P YN L+ ++ + D DL L L K + L
Sbjct: 397 KMVKCGHMPGYVVYNILIGSICGDKDSLNCDL-LDLAEKAYSEMLAAGVVLNKINVSSFT 455
Query: 513 --LCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTRR 566
LC G+ + A+ + M+ +G + K+++A L E +R
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 511
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 108/256 (42%), Gaps = 31/256 (12%)
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAA 258
C P+ +++ ++ LCK ++E +L + K P+ + I GF +G++
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 798
Query: 259 LEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKV-----RVRNTRRPCTILVPNM 313
LE+ +M GV P +LI C K G+++ ++ T P
Sbjct: 799 LELLERMGSKGVAPNYVTYRVLIDHCC----KNGALDVAHNLLEEMKQTHWP-------- 846
Query: 314 GGNSGAIQPAVEVFWAVF--NSGLL---------PSTFVVVKLMSELCRLGQTEEAVKLL 362
++ + +E F F + GLL P V L+ L + + E A++LL
Sbjct: 847 -THTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLL 905
Query: 363 RIVEERKLTCVE--EGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLC 420
V T V+ Y ++++LC +VE A LF M G+ P++ + S+I L
Sbjct: 906 EEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLF 965
Query: 421 TLGNLDHAMGVFELMN 436
+ A+ + + ++
Sbjct: 966 RNSKISEALLLLDFIS 981
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 138/305 (45%), Gaps = 6/305 (1%)
Query: 183 RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSC 242
RI +A++LF+++ + G KP+ + + ++ LCK + +EL ++ P+ +
Sbjct: 168 RIEDAIALFDQILGM-GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTY 226
Query: 243 GNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVE--KVRVR 300
+ G C +GR G A + M K + P LI + + + E V ++
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 301 NTRRPCTILVPNMGGN---SGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEE 357
+ P ++ G + A ++F+ + +G P+ + L+ C+ + E+
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVED 346
Query: 358 AVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVIS 417
+K+ + ++ + Y ++++ C + + A +F +M + P + YN ++
Sbjct: 347 GMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406
Query: 418 MLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIP 477
LC G ++ A+ +FE M K+ + +TYT +I K+ + A+DL + G P
Sbjct: 407 GLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKP 466
Query: 478 ELQTY 482
+ TY
Sbjct: 467 NVITY 471
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 158/378 (41%), Gaps = 41/378 (10%)
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAA 258
G +PD + F ++L C E+ I L +I P+ + I C+ L A
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 259 LEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSG 318
+E+F+QM G P N L+ LC + + +R RR
Sbjct: 208 VELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRR-------------- 253
Query: 319 AIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYA 378
I+P V F A L+ ++G+ EA +L ++ + + Y
Sbjct: 254 -IEPNVITFTA---------------LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYG 297
Query: 379 IVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKK 438
++ LC + ++EA +F M G P +Y ++I C ++ M +F M++K
Sbjct: 298 SLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK 357
Query: 439 RCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN-LVDNLL--REHDRS 495
+ + +TYT LI + V VA ++ +M P+++TYN L+D L + +++
Sbjct: 358 GVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKA 417
Query: 496 DLCLKLERKLE--------NHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHV 547
+ + RK E +Q +CKLG+++ A++ S+ KG+ + T
Sbjct: 418 LMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISG 477
Query: 548 FQKNGKLKIARQLLETTR 565
F + G + A L + +
Sbjct: 478 FCRRGLIHEADSLFKKMK 495
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 141/313 (45%), Gaps = 6/313 (1%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
IR L ++ ++ A+ LF +M T G +P+ + +N ++ LC+ + L + +
Sbjct: 195 IRCLCKNRHLNHAVELFNQMGTN-GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRR 253
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC--SLSEKKG 292
P+ + I F ++G+L A E+++ M ++ V P LI LC L ++
Sbjct: 254 IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEAR 313
Query: 293 SVEKVRVRNTRRPCTILVPNM---GGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSEL 349
+ + RN P ++ + S ++ +++F+ + G++ +T L+
Sbjct: 314 QMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGY 373
Query: 350 CRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKL 409
C +G+ + A ++ + R+ Y +++ LC + +VE+A +F M + +
Sbjct: 374 CLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINI 433
Query: 410 GVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLME 469
Y +I +C LG ++ A +F + K P+ +TYT +I + A L +
Sbjct: 434 VTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493
Query: 470 MLGLGWIPELQTY 482
M G++P Y
Sbjct: 494 MKEDGFLPNESVY 506
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 141/321 (43%), Gaps = 18/321 (5%)
Query: 162 QKGKVSPKAMSICIRFLGRH---GRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQ 218
++ +V PK S C L R G+ + F++M G +P +N ++ +CK
Sbjct: 219 KRFRVFPKTRS-CNGLLHRFAKLGKTDDVKRFFKDMIGA-GARPTVFTYNIMIDCMCK-- 274
Query: 219 SSEETIELALRIFHKME----SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTR 274
E +E A +F +M+ PDT + + I GF ++GRL + F +M + P
Sbjct: 275 --EGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDV 332
Query: 275 SAVNMLIGELCSLSEKKGSVEKVRVR--NTRRPCTILVPNMGG---NSGAIQPAVEVFWA 329
N LI C + +E R N +P + + G +Q A++ +
Sbjct: 333 ITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVD 392
Query: 330 VFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQ 389
+ GL+P+ + L+ C++G +A +L + + + Y ++ LCD +
Sbjct: 393 MRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAER 452
Query: 390 VEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTA 449
++EA LFG+M G+ P L YN++I N+D A+ + + + PD L Y
Sbjct: 453 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGT 512
Query: 450 LIHAHGKVKNWKVAYDLLMEM 470
I ++ + A ++ EM
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEM 533
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 155/393 (39%), Gaps = 32/393 (8%)
Query: 200 CKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES----PDTYSCGNTIVGFCRLGRL 255
C P VF+ + VL EE A++ F KM+ P T SC + F +LG+
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEE----AIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKT 243
Query: 256 GAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNM-- 313
F M G PT N++I +C K+G VE R LVP+
Sbjct: 244 DDVKRFFKDMIGAGARPTVFTYNIMIDCMC----KEGDVEAARGLFEEMKFRGLVPDTVT 299
Query: 314 -------GGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVE 366
G G + V F + + P L++ C+ G+ ++ R ++
Sbjct: 300 YNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK 359
Query: 367 ERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLD 426
L Y+ ++ A C +++A + M GL P Y S+I C +GNL
Sbjct: 360 GNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLS 419
Query: 427 HAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVD 486
A + M + + +TYTALI + K A +L +M G IP L +YN +
Sbjct: 420 DAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI 479
Query: 487 NLLREHDRSDLCLKLERKLENHQLQK-----------LCKLGQLDAAYEKAKSMLEKGIH 535
+ + D L+L +L+ ++ LC L +++AA M E GI
Sbjct: 480 HGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIK 539
Query: 536 LSAYARDTFEHVFQKNGKLKIARQLLETTRRVQ 568
++ T + K+G LL+ + +
Sbjct: 540 ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 572
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 180 RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDT 239
+ G + +A+ + +M V G P+ + +++ CK + + L + +
Sbjct: 379 KEGMMQQAIKFYVDMRRV-GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNV 437
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRV 299
+ I G C R+ A E+F +M+ GV+P ++ N LI ++E +
Sbjct: 438 VTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNE 497
Query: 300 RNTR--RPCTILVPNMGGNSGAIQPAVEVFWAVFNS----GLLPSTFVVVKLMSELCRLG 353
R +P +L +++ +E V N G+ ++ + LM + G
Sbjct: 498 LKGRGIKPDLLLYGTFIWGLCSLE-KIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSG 556
Query: 354 QTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRML-ACGLKPKLGVY 412
E + LL ++E + + +++ LC + V +A + F R+ GL+ ++
Sbjct: 557 NPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIF 616
Query: 413 NSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLG 472
++I LC ++ A +FE M +K +PD YT+L+ + K N A L +M
Sbjct: 617 TAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 676
Query: 473 LGWIPELQTY 482
+G +L Y
Sbjct: 677 IGMKLDLLAY 686
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 118/283 (41%), Gaps = 17/283 (6%)
Query: 183 RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSC 242
R+ EA LF +M+T G P+ +N +++ K ++ + +EL + + PD
Sbjct: 452 RMKEAEELFGKMDTA-GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLY 510
Query: 243 GNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGS--------- 293
G I G C L ++ AA + ++M + G+ A +++ L K G+
Sbjct: 511 GTFIWGLCSLEKIEAAKVVMNEMKECGI----KANSLIYTTLMDAYFKSGNPTEGLHLLD 566
Query: 294 -VEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNS-GLLPSTFVVVKLMSELCR 351
++++ + T +L+ + N + AV+ F + N GL + + ++ LC+
Sbjct: 567 EMKELDIEVTVVTFCVLIDGLCKNK-LVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 625
Query: 352 LGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGV 411
Q E A L + ++ L Y +M V EA L +M G+K L
Sbjct: 626 DNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLA 685
Query: 412 YNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAH 454
Y S++ L L A E M + PD + +++ H
Sbjct: 686 YTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKH 728
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 161/402 (40%), Gaps = 31/402 (7%)
Query: 183 RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSC 242
R +A +LF EM P + F +L + E I + ++ S D YS
Sbjct: 51 RFEDAFALFFEMVHS-QPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSF 109
Query: 243 GNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSE------------K 290
I FCR RL AL + +M K+G P+ L+ C ++ K
Sbjct: 110 TILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK 169
Query: 291 KGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELC 350
G V V NT L+ + N G + A+E+ + GL L++ LC
Sbjct: 170 SGYEPNVVVYNT------LIDGLCKN-GELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 351 RLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLG 410
G+ +A ++LR + +R + + ++ ++EA L+ M+ + P
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 411 VYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEM 470
YNS+I+ LC G L A F+LM K C P+ +TY LI K + L M
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 471 LGLGWIPELQTYNLVDNLLREHDR-----SDLCLKLERKLENH------QLQKLCKLGQL 519
G+ ++ TYN + + + + C + R++ L LC G++
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402
Query: 520 DAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLL 561
++A K M E ++ A + H K K++ A +L
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF 444
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/436 (20%), Positives = 162/436 (37%), Gaps = 64/436 (14%)
Query: 113 RAKTLNF-FSWAGTQMGFQFDDSVVEY---MADFLGRRKLFDDMKCLLMTVASQKGKVSP 168
R L+F S G M ++ S+V + + F ++ D +++ V K P
Sbjct: 118 RCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV---KSGYEP 174
Query: 169 KAM--SICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIEL 226
+ + I L ++G ++ AL L EME G D + +N +L LC + +
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKK-GLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 227 ALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCS 286
+ + +PD + I F + G L A E++ +M + V P N +I LC
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293
Query: 287 LSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLM 346
G + A + F + + G P+ L+
Sbjct: 294 ------------------------------HGRLYDAKKTFDLMASKGCFPNVVTYNTLI 323
Query: 347 SELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLK 406
S C+ +E +KL + + Y ++ C ++ A ++F M++ +
Sbjct: 324 SGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVT 383
Query: 407 PKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDL 466
P + + ++ LC G ++ A+ F+ M + + Y +IH K + A++L
Sbjct: 384 PDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWEL 443
Query: 467 LMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKA 526
+ G P+ +TY ++ + LCK G A E
Sbjct: 444 FCRLPVEGVKPDARTYTIM------------------------ILGLCKNGPRREADELI 479
Query: 527 KSMLEKGIHLSAYARD 542
+ M E+GI A D
Sbjct: 480 RRMKEEGIICQMNAED 495
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 165/443 (37%), Gaps = 95/443 (21%)
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHK-MESP-DTYSCGNTIVGFCRLGRLG 256
G P +L F +++Y +K + IE+ + +K + P D + C I GFC++G+
Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPE 188
Query: 257 AALEIFSQMNKIGVL-PTRSAVNMLIGELCSL---SEKKGSVEKVRVRNTRRPC------ 306
AL F GVL P L+ LC L E + V ++ C
Sbjct: 189 LALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNW 248
Query: 307 --------------------------------TILVPNMGGNSGAIQPAVEVFWAVFNSG 334
+IL+ + G ++ A+ + + G
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLS-KEGNVEEALGLLGKMIKEG 307
Query: 335 LLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEAS 394
+ P+ ++ LC++G+ EEA L + + E Y ++ +C + A
Sbjct: 308 VEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAF 367
Query: 395 NLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAH 454
++ G M G++P + YN+VI+ LC G + A V K + D +TY+ L+ ++
Sbjct: 368 SMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSY 422
Query: 455 GKVKNW-------------KVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCL-- 499
KV+N K+ DL+M + L + Y D L R DL
Sbjct: 423 IKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDT 482
Query: 500 --------------KLERKLE----------------NHQLQKLCKLGQLDAAYEKAKSM 529
++E LE N + LCK G LD A E +
Sbjct: 483 ATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIEL 542
Query: 530 LEKGIHLSAYARDTFEHVFQKNG 552
EKG++L + T H NG
Sbjct: 543 WEKGLYLDIHTSRTLLHSIHANG 565
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 153/379 (40%), Gaps = 48/379 (12%)
Query: 170 AMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALR 229
+ SI I L + G + EAL L +M G +P+ + + ++ LCK EE L R
Sbjct: 279 SYSILIDGLSKEGNVEEALGLLGKMIKE-GVEPNLITYTAIIRGLCKMGKLEEAFVLFNR 337
Query: 230 IFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC---S 286
I D + I G CR G L A + M + G+ P+ N +I LC
Sbjct: 338 ILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGR 397
Query: 287 LSE----KKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVV 342
+SE KG V V +T I V N+ AV F +P V+
Sbjct: 398 VSEADEVSKGVVGDVITYSTLLDSYIKVQNI--------DAVLEIRRRFLEAKIPMDLVM 449
Query: 343 VK-LMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRML 401
L+ +G EA L R + E LT YA ++K C Q+EEA +F +
Sbjct: 450 CNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELR 509
Query: 402 ACGLKPKLGVYNSVISMLCTLGNLDHAMGVF-ELMNKKRCLPDNLTYTAL--IHAHGKVK 458
+ + YN +I LC G LD A V EL K L + + T L IHA+G K
Sbjct: 510 KSSVSAAV-CYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDK 568
Query: 459 NWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQ 518
+LGL Y L E SD+CL + N + LCK G
Sbjct: 569 G----------ILGL-------VYGL------EQLNSDVCLGML----NDAILLLCKRGS 601
Query: 519 LDAAYEKAKSMLEKGIHLS 537
+AA E M KG+ ++
Sbjct: 602 FEAAIEVYMIMRRKGLTVT 620
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 115/282 (40%), Gaps = 61/282 (21%)
Query: 318 GAIQPAVEVFWAVFNSGLL-PSTFVVVKLMSELCRLGQTEEAVKLLRIVEER--KLTCV- 373
G + A+ F + +SG+L P+ L+S LC+LG+ +E L+R +E+ + CV
Sbjct: 185 GKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVF 244
Query: 374 -------------------------EEG-------YAIVMKALCDHCQVEEASNLFGRML 401
E+G Y+I++ L VEEA L G+M+
Sbjct: 245 YSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMI 304
Query: 402 ACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWK 461
G++P L Y ++I LC +G L+ A +F + D Y LI + N
Sbjct: 305 KEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLN 364
Query: 462 VAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDA 521
A+ +L +M G P + TYN V N LC G++
Sbjct: 365 RAFSMLGDMEQRGIQPSILTYNTVIN------------------------GLCMAGRVSE 400
Query: 522 AYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLET 563
A E +K ++ I S D++ V + L+I R+ LE
Sbjct: 401 ADEVSKGVVGDVITYSTLL-DSYIKVQNIDAVLEIRRRFLEA 441
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 135/331 (40%), Gaps = 43/331 (12%)
Query: 180 RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKK----QSSEETIEL--------- 226
+ G+I EAL +F E+ + +N ++ LCKK ++E IEL
Sbjct: 494 KTGQIEEALEMFNELRK--SSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDI 551
Query: 227 ------------------ALRIFHKMESPDTYSC----GNTIVGFCRLGRLGAALEIFSQ 264
L + + +E ++ C + I+ C+ G AA+E++
Sbjct: 552 HTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMI 611
Query: 265 MNKIGVLPT--RSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPC---TILVPNMGGNSGA 319
M + G+ T + + L+ L SL V + TI++ + G
Sbjct: 612 MRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLC-KEGF 670
Query: 320 IQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAI 379
+ A+ + + G+ +T L++ LC+ G EA++L +E L E Y I
Sbjct: 671 LVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGI 730
Query: 380 VMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKR 439
++ LC +A L M++ GL P + +YNS++ C LG + AM V R
Sbjct: 731 LIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGR 790
Query: 440 CLPDNLTYTALIHAHGKVKNWKVAYDLLMEM 470
PD T +++I + K + + A + E
Sbjct: 791 VTPDAFTVSSMIKGYCKKGDMEEALSVFTEF 821
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 149/391 (38%), Gaps = 81/391 (20%)
Query: 236 SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVE 295
+PDT + I G+C+ G++ ALE+F+++ K V N +I LC KKG ++
Sbjct: 479 TPDTATYATMIKGYCKTGQIEEALEMFNELRKSSV-SAAVCYNRIIDALC----KKGMLD 533
Query: 296 ---KVRVR----------NTRRPCTILVPNMGGNSGAI-------QPAVEVFWAVFNSGL 335
+V + +T R + GG+ G + Q +V + N +
Sbjct: 534 TATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAI 593
Query: 336 LPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTC----------------------- 372
L LC+ G E A+++ I+ + LT
Sbjct: 594 LL-----------LCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLV 642
Query: 373 VEEG-----------YAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCT 421
V G Y I++ LC + +A NL + G+ YNS+I+ LC
Sbjct: 643 VNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQ 702
Query: 422 LGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQT 481
G L A+ +F+ + +P +TY LI K + A LL M+ G +P +
Sbjct: 703 QGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIII 762
Query: 482 YN-LVDNLLREHDRSDLCLKLERKLE----------NHQLQKLCKLGQLDAAYEKAKSML 530
YN +VD + D + RK+ + ++ CK G ++ A
Sbjct: 763 YNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFK 822
Query: 531 EKGIHLSAYARDTFEHVFQKNGKLKIARQLL 561
+K I + F G+++ AR LL
Sbjct: 823 DKNISADFFGFLFLIKGFCTKGRMEEARGLL 853
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 19/177 (10%)
Query: 238 DTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKG---SV 294
+T + + I G C+ G L AL +F + IG++P+ +LI LC K+G
Sbjct: 689 NTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLC----KEGLFLDA 744
Query: 295 EKVRVRNTRRPCTILVPNMG-GNS--------GAIQPAVEVFWAVFNSGLLPSTFVVVKL 345
EK+ + LVPN+ NS G + A+ V + P F V +
Sbjct: 745 EKLLDSMVSKG---LVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSM 801
Query: 346 MSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLA 402
+ C+ G EEA+ + +++ ++ G+ ++K C ++EEA L ML
Sbjct: 802 IKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLV 858
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 138/377 (36%), Gaps = 81/377 (21%)
Query: 206 VFNNVLYVLCKKQSSEETIELALRIFHK-----------------MESPDTY----SCGN 244
+ N+ + +LCK+ S E IE+ + + K + S D Y + G
Sbjct: 588 MLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGE 647
Query: 245 T-------------IVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKK 291
T I G C+ G L AL + S GV N LI LC
Sbjct: 648 TTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLC------ 701
Query: 292 GSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCR 351
G + A+ +F ++ N GL+PS L+ LC+
Sbjct: 702 ------------------------QQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCK 737
Query: 352 LGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGV 411
G +A KLL + + L Y ++ C Q E+A + R + + P
Sbjct: 738 EGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFT 797
Query: 412 YNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEML 471
+S+I C G+++ A+ VF K D + LI + A LL EML
Sbjct: 798 VSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Query: 472 GLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAY----EKAK 527
+ +++++ +R D L + L +LC+ G++ A E +
Sbjct: 858 ------------VSESVVKLINRVDAELAESESIRGF-LVELCEQGRVPQAIKILDEISS 904
Query: 528 SMLEKGIHLSAYARDTF 544
++ G +L +Y R F
Sbjct: 905 TIYPSGKNLGSYQRLQF 921
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 105/247 (42%), Gaps = 20/247 (8%)
Query: 332 NSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGY--AIVMKALCDHCQ 389
N G PS+ L+ G+ + A+++L ++ + + + + + V+ C +
Sbjct: 127 NHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGK 186
Query: 390 VEEASNLFGRMLACG-LKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYT 448
E A F + G L P L Y +++S LC LG +D + + + D + Y+
Sbjct: 187 PELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYS 246
Query: 449 ALIHAHGKVKNWKVAYDLLM---EMLGLGWIPELQTYN-LVDNLLREHDRSDLCLKLERK 504
IH + K D LM EM+ G ++ +Y+ L+D L +E + + L +
Sbjct: 247 NWIHGYFK---GGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKM 303
Query: 505 LE----------NHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKL 554
++ ++ LCK+G+L+ A+ +L GI + + T + G L
Sbjct: 304 IKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNL 363
Query: 555 KIARQLL 561
A +L
Sbjct: 364 NRAFSML 370
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 198/452 (43%), Gaps = 38/452 (8%)
Query: 139 MADFLGRRKLFDD---MKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEME 195
+ D L +R+L ++ L+ V+ VS S + + + G I++++ +FE++
Sbjct: 102 LLDKLAQRELLSSPLVLRSLVGGVSEDPEDVS-HVFSWLMIYYAKAGMINDSIVVFEQIR 160
Query: 196 TVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYS---CGNTIVGFC-R 251
+ G KP +L VL KQ +T+ +IF KM + N +V C +
Sbjct: 161 SC-GLKP-HLQACTVLLNSLVKQRLTDTV---WKIFKKMVKLGVVANIHVYNVLVHACSK 215
Query: 252 LGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVP 311
G A ++ S+M + GV P N LI C +K E + V++ R + + P
Sbjct: 216 SGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYC---KKSMHFEALSVQD-RMERSGVAP 271
Query: 312 NM---------GGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLL 362
N+ G ++ A +F + + + L+ CR+ +EA++L
Sbjct: 272 NIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEALRLR 330
Query: 363 RIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTL 422
++E R + Y +++ LC+ ++ EA+ L M ++P N++I+ C +
Sbjct: 331 EVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKI 390
Query: 423 GNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTY 482
++ A+ V + M + D +Y ALIH KV + A + L M+ G+ P TY
Sbjct: 391 EDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATY 450
Query: 483 NLVDNLLREHDRSDLCLKLERKLENHQL-----------QKLCKLGQLDAAYEKAKSMLE 531
+ + + ++ D KL + E L +++CKL Q+D A +SM +
Sbjct: 451 SWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEK 510
Query: 532 KGIHLSAYARDTFEHVFQKNGKLKIARQLLET 563
KG+ + T + + + GK+ A L +
Sbjct: 511 KGLVGDSVIFTTMAYAYWRTGKVTEASALFDV 542
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 108/276 (39%), Gaps = 31/276 (11%)
Query: 180 RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDT 239
R I EAL L E ME+ G P + +N++L LC+ E L + K PD
Sbjct: 319 RMNDIDEALRLREVMESR-GFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDN 377
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRV 299
+C I +C++ + +A+++ +M + G+ + LI C + E
Sbjct: 378 ITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLE---------- 427
Query: 300 RNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAV 359
++ A E +++ G P L+ + +E
Sbjct: 428 --------------------LENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEIT 467
Query: 360 KLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISML 419
KLL E+R L Y +++ +C QV+ A LF M GL ++ ++
Sbjct: 468 KLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAY 527
Query: 420 CTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHG 455
G + A +F++M +R + + Y ++ ++
Sbjct: 528 WRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYA 563
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 152/368 (41%), Gaps = 30/368 (8%)
Query: 172 SICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIF 231
SI ++ L R RI +A + +EM T G P+ +V+NN++ + S + IE+ +
Sbjct: 334 SILVKGLTRAKRIGDAYFVLKEM-TKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 392
Query: 232 HKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCS---LS 288
K S + + I G+C+ G+ A + +M IG + + +I LCS
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 452
Query: 289 EKKGSVEKVRVRNTRRPCTILVPNMGG--NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLM 346
V ++ +RN +L + G G A+E+++ N G + T L+
Sbjct: 453 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 512
Query: 347 SELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLK 406
LC G+ +EA ++ + + R Y ++ C +++EA M+ GLK
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 572
Query: 407 PKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDL 466
P Y+ +I L + ++ A+ ++ + LPD TY+ +I K + + +
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 467 LMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKA 526
EM+ P Y NH ++ C+ G+L A E
Sbjct: 633 FDEMMSKNVQPNTVVY------------------------NHLIRAYCRSGRLSMALELR 668
Query: 527 KSMLEKGI 534
+ M KGI
Sbjct: 669 EDMKHKGI 676
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 146/359 (40%), Gaps = 19/359 (5%)
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAA 258
G P N +L L + ++ E A + K SPD Y I FC+ G++ A
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEA 279
Query: 259 LEIFSQMNKIGVLPTRSAVNMLIGEL--CSLSEKKGSVEKVRVRNTRRPC----TILVPN 312
+++FS+M + GV P N +I L C ++ ++ V P +ILV
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 313 MGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTC 372
+ + I A V + G P+ V L+ G +A+++ ++ + L+
Sbjct: 340 L-TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 398
Query: 373 VEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVF 432
Y ++K C + Q + A L ML+ G G + SVI +LC+ D A+
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Query: 433 ELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREH 492
M + P T LI K A +L + L G++ + +T N + + L E
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 518
Query: 493 DRSDLCLKLERKL-----------ENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYA 540
+ D ++++++ N + C +LD A+ M+++G+ Y
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 577
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 128/321 (39%), Gaps = 35/321 (10%)
Query: 166 VSPKA--MSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEET 223
VSP + I + G++ EA+ LF +ME G P+ + FN V+ L +E
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA-GVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 224 IELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGE 283
++ + P + + G R R+G A + +M K G P N LI
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 284 LCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVV 343
+G++ A+E+ + + GL ++
Sbjct: 375 FIE------------------------------AGSLNKAIEIKDLMVSKGLSLTSSTYN 404
Query: 344 KLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLAC 403
L+ C+ GQ + A +LL+ + + + V+ LC H + A G ML
Sbjct: 405 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 464
Query: 404 GLKPKLGVYNSVISMLCTLGNLDHAMGV-FELMNKKRCLPDNLTYTALIHAHGKVKNWKV 462
+ P G+ ++IS LC G A+ + F+ +NK + D T AL+H +
Sbjct: 465 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV-DTRTSNALLHGLCEAGKLDE 523
Query: 463 AYDLLMEMLGLGWIPELQTYN 483
A+ + E+LG G + + +YN
Sbjct: 524 AFRIQKEILGRGCVMDRVSYN 544
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 123/301 (40%), Gaps = 31/301 (10%)
Query: 182 GRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYS 241
G++ EA + +E+ GC D + +N ++ C K+ +E + + PD Y+
Sbjct: 519 GKLDEAFRIQKEILGR-GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 577
Query: 242 CGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRN 301
I G + ++ A++ + + G+LP +++I C
Sbjct: 578 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER------------ 625
Query: 302 TRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKL 361
+ E F + + + P+T V L+ CR G+ A++L
Sbjct: 626 ------------------TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 362 LRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCT 421
++ + ++ Y ++K + +VEEA LF M GL+P + Y ++I
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727
Query: 422 LGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQT 481
LG + + M+ K P+ +TYT +I + + N A LL EM G +P+ T
Sbjct: 728 LGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 787
Query: 482 Y 482
Y
Sbjct: 788 Y 788
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 27/241 (11%)
Query: 323 AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMK 382
A++VF + N G+ PS L++ L R + ++ + +V + ++ + +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC-KGVSPDVYLFTTAIN 268
Query: 383 ALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLP 442
A C +VEEA LF +M G+ P + +N+VI L G D A E M ++ P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 443 DNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN-LVDNLLREHDRSDLCLKL 501
+TY+ L+ + K AY +L EM G+ P + YN L+D+ +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI------------ 376
Query: 502 ERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLL 561
+ G L+ A E M+ KG+ L++ +T + KNG+ A +LL
Sbjct: 377 -------------EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 423
Query: 562 E 562
+
Sbjct: 424 K 424
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 134/323 (41%), Gaps = 25/323 (7%)
Query: 258 ALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVP------ 311
AL++F + G+ P+++ N+L+ L +E + E V C + P
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV-----VCKGVSPDVYLFT 264
Query: 312 ---NMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEER 368
N G ++ AV++F + +G+ P+ ++ L G+ +EA + ER
Sbjct: 265 TAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVER 324
Query: 369 KLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHA 428
+ Y+I++K L ++ +A + M G P + VYN++I G+L+ A
Sbjct: 325 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 384
Query: 429 MGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNL 488
+ + +LM K + TY LI + K A LL EML +G+ ++ V L
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL 444
Query: 489 LREHDRSDLCLKL--ERKLENHQ---------LQKLCKLGQLDAAYEKAKSMLEKGIHLS 537
L H D L+ E L N + LCK G+ A E L KG +
Sbjct: 445 LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 504
Query: 538 AYARDTFEHVFQKNGKLKIARQL 560
+ H + GKL A ++
Sbjct: 505 TRTSNALLHGLCEAGKLDEAFRI 527
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 142/343 (41%), Gaps = 10/343 (2%)
Query: 150 DDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNN 209
D+ + LL + S V+ + + I L H AL EM + P +
Sbjct: 417 DNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM-LLRNMSPGGGLLTT 475
Query: 210 VLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIG 269
++ LCK + +EL + +K DT + + G C G+L A I ++ G
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 270 VLPTRSAVNMLIGELCS---LSEKKGSVEKVRVRNTRRP----CTILVPNMGGNSGAIQP 322
+ R + N LI C L E ++++ V+ +P +IL+ + N ++
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEM-VKRGLKPDNYTYSILICGLF-NMNKVEE 593
Query: 323 AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMK 382
A++ + +G+LP + ++ C+ +TEE + + + + Y +++
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 383 ALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLP 442
A C ++ A L M G+ P Y S+I + + ++ A +FE M + P
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 443 DNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLV 485
+ YTALI +GK+ LL EM P TY ++
Sbjct: 714 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVM 756
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 117/314 (37%), Gaps = 42/314 (13%)
Query: 144 GRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPD 203
G++KL D+ L + + K SI I L ++ EA+ +++ + G PD
Sbjct: 552 GKKKL-DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN-GMLPD 609
Query: 204 NLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFS 263
++ ++ CK + +EE E + K P+T + I +CR GRL ALE+
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Query: 264 QMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPA 323
M G+ P + LI + +S ++ A
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISR------------------------------VEEA 699
Query: 324 VEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKA 383
+F + GL P+ F L+ +LGQ + LLR + + + + Y +++
Sbjct: 700 KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 759
Query: 384 LCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPD 443
V EAS L M G+ P Y I G L GV E D
Sbjct: 760 YARDGNVTEASRLLNEMREKGIVPDSITYKEFI-----YGYLKQG-GVLEAFKGS----D 809
Query: 444 NLTYTALIHAHGKV 457
Y A+I K+
Sbjct: 810 EENYAAIIEGWNKL 823
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 152/368 (41%), Gaps = 30/368 (8%)
Query: 172 SICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIF 231
SI ++ L R RI +A + +EM T G P+ +V+NN++ + S + IE+ +
Sbjct: 334 SILVKGLTRAKRIGDAYFVLKEM-TKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 392
Query: 232 HKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCS---LS 288
K S + + I G+C+ G+ A + +M IG + + +I LCS
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 452
Query: 289 EKKGSVEKVRVRNTRRPCTILVPNMGG--NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLM 346
V ++ +RN +L + G G A+E+++ N G + T L+
Sbjct: 453 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 512
Query: 347 SELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLK 406
LC G+ +EA ++ + + R Y ++ C +++EA M+ GLK
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 572
Query: 407 PKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDL 466
P Y+ +I L + ++ A+ ++ + LPD TY+ +I K + + +
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 467 LMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKA 526
EM+ P Y NH ++ C+ G+L A E
Sbjct: 633 FDEMMSKNVQPNTVVY------------------------NHLIRAYCRSGRLSMALELR 668
Query: 527 KSMLEKGI 534
+ M KGI
Sbjct: 669 EDMKHKGI 676
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 146/359 (40%), Gaps = 19/359 (5%)
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAA 258
G P N +L L + ++ E A + K SPD Y I FC+ G++ A
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEA 279
Query: 259 LEIFSQMNKIGVLPTRSAVNMLIGEL--CSLSEKKGSVEKVRVRNTRRPC----TILVPN 312
+++FS+M + GV P N +I L C ++ ++ V P +ILV
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 313 MGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTC 372
+ + I A V + G P+ V L+ G +A+++ ++ + L+
Sbjct: 340 L-TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 398
Query: 373 VEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVF 432
Y ++K C + Q + A L ML+ G G + SVI +LC+ D A+
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Query: 433 ELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREH 492
M + P T LI K A +L + L G++ + +T N + + L E
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 518
Query: 493 DRSDLCLKLERKL-----------ENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYA 540
+ D ++++++ N + C +LD A+ M+++G+ Y
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 577
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 128/321 (39%), Gaps = 35/321 (10%)
Query: 166 VSPKA--MSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEET 223
VSP + I + G++ EA+ LF +ME G P+ + FN V+ L +E
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA-GVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 224 IELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGE 283
++ + P + + G R R+G A + +M K G P N LI
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 284 LCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVV 343
+G++ A+E+ + + GL ++
Sbjct: 375 FIE------------------------------AGSLNKAIEIKDLMVSKGLSLTSSTYN 404
Query: 344 KLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLAC 403
L+ C+ GQ + A +LL+ + + + V+ LC H + A G ML
Sbjct: 405 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 464
Query: 404 GLKPKLGVYNSVISMLCTLGNLDHAMGV-FELMNKKRCLPDNLTYTALIHAHGKVKNWKV 462
+ P G+ ++IS LC G A+ + F+ +NK + D T AL+H +
Sbjct: 465 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV-DTRTSNALLHGLCEAGKLDE 523
Query: 463 AYDLLMEMLGLGWIPELQTYN 483
A+ + E+LG G + + +YN
Sbjct: 524 AFRIQKEILGRGCVMDRVSYN 544
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 123/301 (40%), Gaps = 31/301 (10%)
Query: 182 GRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYS 241
G++ EA + +E+ GC D + +N ++ C K+ +E + + PD Y+
Sbjct: 519 GKLDEAFRIQKEILGR-GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 577
Query: 242 CGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRN 301
I G + ++ A++ + + G+LP +++I C
Sbjct: 578 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER------------ 625
Query: 302 TRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKL 361
+ E F + + + P+T V L+ CR G+ A++L
Sbjct: 626 ------------------TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 362 LRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCT 421
++ + ++ Y ++K + +VEEA LF M GL+P + Y ++I
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727
Query: 422 LGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQT 481
LG + + M+ K P+ +TYT +I + + N A LL EM G +P+ T
Sbjct: 728 LGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 787
Query: 482 Y 482
Y
Sbjct: 788 Y 788
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 27/241 (11%)
Query: 323 AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMK 382
A++VF + N G+ PS L++ L R + ++ + +V + ++ + +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC-KGVSPDVYLFTTAIN 268
Query: 383 ALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLP 442
A C +VEEA LF +M G+ P + +N+VI L G D A E M ++ P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 443 DNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN-LVDNLLREHDRSDLCLKL 501
+TY+ L+ + K AY +L EM G+ P + YN L+D+ +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI------------ 376
Query: 502 ERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLL 561
+ G L+ A E M+ KG+ L++ +T + KNG+ A +LL
Sbjct: 377 -------------EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 423
Query: 562 E 562
+
Sbjct: 424 K 424
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 134/323 (41%), Gaps = 25/323 (7%)
Query: 258 ALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVP------ 311
AL++F + G+ P+++ N+L+ L +E + E V C + P
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV-----VCKGVSPDVYLFT 264
Query: 312 ---NMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEER 368
N G ++ AV++F + +G+ P+ ++ L G+ +EA + ER
Sbjct: 265 TAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVER 324
Query: 369 KLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHA 428
+ Y+I++K L ++ +A + M G P + VYN++I G+L+ A
Sbjct: 325 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 384
Query: 429 MGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNL 488
+ + +LM K + TY LI + K A LL EML +G+ ++ V L
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL 444
Query: 489 LREHDRSDLCLKL--ERKLENHQ---------LQKLCKLGQLDAAYEKAKSMLEKGIHLS 537
L H D L+ E L N + LCK G+ A E L KG +
Sbjct: 445 LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 504
Query: 538 AYARDTFEHVFQKNGKLKIARQL 560
+ H + GKL A ++
Sbjct: 505 TRTSNALLHGLCEAGKLDEAFRI 527
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 142/343 (41%), Gaps = 10/343 (2%)
Query: 150 DDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNN 209
D+ + LL + S V+ + + I L H AL EM + P +
Sbjct: 417 DNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM-LLRNMSPGGGLLTT 475
Query: 210 VLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIG 269
++ LCK + +EL + +K DT + + G C G+L A I ++ G
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 270 VLPTRSAVNMLIGELCS---LSEKKGSVEKVRVRNTRRP----CTILVPNMGGNSGAIQP 322
+ R + N LI C L E ++++ V+ +P +IL+ + N ++
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEM-VKRGLKPDNYTYSILICGLF-NMNKVEE 593
Query: 323 AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMK 382
A++ + +G+LP + ++ C+ +TEE + + + + Y +++
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 383 ALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLP 442
A C ++ A L M G+ P Y S+I + + ++ A +FE M + P
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 443 DNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLV 485
+ YTALI +GK+ LL EM P TY ++
Sbjct: 714 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVM 756
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 117/314 (37%), Gaps = 42/314 (13%)
Query: 144 GRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPD 203
G++KL D+ L + + K SI I L ++ EA+ +++ + G PD
Sbjct: 552 GKKKL-DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN-GMLPD 609
Query: 204 NLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFS 263
++ ++ CK + +EE E + K P+T + I +CR GRL ALE+
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Query: 264 QMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPA 323
M G+ P + LI + +S ++ A
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISR------------------------------VEEA 699
Query: 324 VEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKA 383
+F + GL P+ F L+ +LGQ + LLR + + + + Y +++
Sbjct: 700 KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 759
Query: 384 LCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPD 443
V EAS L M G+ P Y I G L GV E D
Sbjct: 760 YARDGNVTEASRLLNEMREKGIVPDSITYKEFI-----YGYLKQG-GVLEAFKGS----D 809
Query: 444 NLTYTALIHAHGKV 457
Y A+I K+
Sbjct: 810 EENYAAIIEGWNKL 823
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/490 (20%), Positives = 187/490 (38%), Gaps = 52/490 (10%)
Query: 128 GFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEA 187
G++ D ++ + GR L + ++ K S + + I L + + A
Sbjct: 140 GYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLA 199
Query: 188 LSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIV 247
F++M + GCKPD +N +++ +CKK +E I L ++ + P+ ++ I
Sbjct: 200 YLKFQQMRSD-GCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILID 258
Query: 248 GFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGE-------------LCSLSEKKGSV 294
GF GR+ AL+ M + P + + + L EK ++
Sbjct: 259 GFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNL 318
Query: 295 EKVRV--------RNTRRPCTILVPNMGGNSGAIQPA-------------------VEVF 327
++V N+ T G G I + +F
Sbjct: 319 QRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIF 378
Query: 328 WAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDH 387
+ G+ P + L+ L + E + L+ + L Y V+ LC
Sbjct: 379 DGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKA 438
Query: 388 CQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTY 447
++E A+ M G+ P L +N+ +S G++ GV E + PD +T+
Sbjct: 439 RRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITF 498
Query: 448 TALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLE- 506
+ +I+ + K K A+D EML G P TYN++ +D +KL K++
Sbjct: 499 SLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKE 558
Query: 507 ----------NHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKI 556
N +Q CK+ ++ A E K+ML G+ + T ++G+
Sbjct: 559 NGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESE 618
Query: 557 ARQLLETTRR 566
AR++ + R
Sbjct: 619 AREMFSSIER 628
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%)
Query: 377 YAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMN 436
+++++ LC ++++A + F ML G++P YN +I C+ G+ D ++ +F M
Sbjct: 498 FSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMK 557
Query: 437 KKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSD 496
+ PD Y A I + K++ K A +LL ML +G P+ TY+ + L E R
Sbjct: 558 ENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRES 617
Query: 497 LCLKLERKLENH 508
++ +E H
Sbjct: 618 EAREMFSSIERH 629
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 113/299 (37%), Gaps = 13/299 (4%)
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAA 258
G PD+ FN + L K ET + + P + R
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEG 409
Query: 259 LEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNM----- 313
QM G+L + + N +I LC K +E + T + PN+
Sbjct: 410 DRYLKQMGVDGLLSSVYSYNAVIDCLC----KARRIENAAMFLTEMQDRGISPNLVTFNT 465
Query: 314 --GGNS--GAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERK 369
G S G ++ V + G P +++ LCR + ++A + + E
Sbjct: 466 FLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWG 525
Query: 370 LTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAM 429
+ E Y I++++ C + + LF +M GL P L YN+ I C + + A
Sbjct: 526 IEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAE 585
Query: 430 GVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNL 488
+ + M + PDN TY+ LI A + A ++ + G +P+ T LV+ L
Sbjct: 586 ELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEEL 644
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 151/361 (41%), Gaps = 37/361 (10%)
Query: 96 LSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCL 155
++ + VL+VL + + G + FF WA +Q G+ M D LG+ + FD M L
Sbjct: 130 VTESLVLQVLRRFSN-GWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWEL 188
Query: 156 L--MTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYV 213
+ M + V+ MS +R L + G+ ++A+ F EME +G K D + N+++
Sbjct: 189 VNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDA 248
Query: 214 LCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPT 273
L K+ S E E+ L++F ++ PD + I GFC+ + A + M P
Sbjct: 249 LVKENSIEHAHEVFLKLFDTIK-PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPD 307
Query: 274 RSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNS 333
+ C K+G +V E+ + +
Sbjct: 308 VVTYTSFVEAYC----KEGDFRRVN--------------------------EMLEEMREN 337
Query: 334 GLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEA 393
G P+ +M L + Q EA+ + ++E + Y+ ++ L + ++A
Sbjct: 338 GCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDA 397
Query: 394 SNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKR---CLPDNLTYTAL 450
+ +F M G++ + VYN++IS + A+ + + M + C P+ TY L
Sbjct: 398 AEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPL 457
Query: 451 I 451
+
Sbjct: 458 L 458
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 90/192 (46%), Gaps = 1/192 (0%)
Query: 318 GAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGY 377
+I+ A EVF +F++ + P L+ C+ + ++A ++ +++ + T Y
Sbjct: 253 NSIEHAHEVFLKLFDT-IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTY 311
Query: 378 AIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNK 437
++A C + + M G P + Y V+ L + A+GV+E M +
Sbjct: 312 TSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKE 371
Query: 438 KRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDL 497
C+PD Y++LIH K +K A ++ +M G ++ YN + + H R ++
Sbjct: 372 DGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEM 431
Query: 498 CLKLERKLENHQ 509
L+L +++E+ +
Sbjct: 432 ALRLLKRMEDEE 443
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 28/221 (12%)
Query: 344 KLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAI--VMKALCDHCQVEEASNLFGRML 401
K+M L + G+ +AV + E+ + A+ +M AL +E A +F ++
Sbjct: 208 KVMRRLAKSGKYNKAVDAF-LEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF 266
Query: 402 ACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWK 461
+KP +N +I C D A + +LM PD +TYT+ + A+ K +++
Sbjct: 267 DT-IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFR 325
Query: 462 VAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDA 521
++L EM G P + TY +V H L K ++ +
Sbjct: 326 RVNEMLEEMRENGCNPNVVTYTIV---------------------MHSLGKSKQVAEALG 364
Query: 522 AYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLE 562
YEK K E G A + H+ K G+ K A ++ E
Sbjct: 365 VYEKMK---EDGCVPDAKFYSSLIHILSKTGRFKDAAEIFE 402
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 160/392 (40%), Gaps = 49/392 (12%)
Query: 189 SLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVG 248
+L +MET+ G PD FN L +LC++ ++ + + PD S I G
Sbjct: 100 ALLSDMETL-GFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILING 158
Query: 249 FCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKV--RVRNTRRPC 306
R G++ A+EI++ M + GV P A L+ LC + + E V +++ R
Sbjct: 159 LFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKL 218
Query: 307 TILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVE 366
+ +V N L+S C+ G+ E+A L +
Sbjct: 219 STVVYN-------------------------------ALISGFCKAGRIEKAEALKSYMS 247
Query: 367 ERKLTCVEE--GYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGN 424
K+ C + Y +++ D+ ++ A + M+ G++ YN ++ C + +
Sbjct: 248 --KIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSH 305
Query: 425 LDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTY-N 483
D + R D ++Y+ LI + N + AY L EM G + + TY +
Sbjct: 306 PDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTS 365
Query: 484 LVDNLLREHDRS----------DLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKG 533
L+ LRE + S +L L +R L LCK G +D AY M+E
Sbjct: 366 LIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHE 425
Query: 534 IHLSAYARDTFEHVFQKNGKLKIARQLLETTR 565
I A + ++ ++G++ A +L E +
Sbjct: 426 ITPDAISYNSLISGLCRSGRVTEAIKLFEDMK 457
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 153/399 (38%), Gaps = 52/399 (13%)
Query: 162 QKGKVSPKAMS--ICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQS 219
Q+G+ P +S I I L R G++ +A+ ++ M G PDN ++ LC +
Sbjct: 142 QRGR-EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRS-GVSPDNKACAALVVGLCHARK 199
Query: 220 SEETIEL-ALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVN 278
+ E+ A I T I GFC+ GR+ A + S M+KIG P N
Sbjct: 200 VDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYN 259
Query: 279 MLIGELC--SLSEKKGSVEKVRVRN------------TRRPCTILVPNMGGNSGAIQPAV 324
+L+ ++ ++ V VR+ +R C + P+ N +
Sbjct: 260 VLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEP 319
Query: 325 EVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKAL 384
F V + L TF CR T +A +L + ++ + Y ++KA
Sbjct: 320 RGFCDVVSYSTLIETF---------CRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAF 370
Query: 385 CDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDN 444
A L +M GL P Y +++ LC GN+D A GVF M + PD
Sbjct: 371 LREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDA 430
Query: 445 LTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERK 504
++Y +LI + A L +M G P+ T+ +
Sbjct: 431 ISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFI------------------- 471
Query: 505 LENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDT 543
+ L + +L AAY+ M++KG L DT
Sbjct: 472 -----IGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDT 505
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 152/366 (41%), Gaps = 47/366 (12%)
Query: 190 LFEEMETVFGC-KPDNLVFNNVLY-VLCKKQSSEETIELALRIFHKMES----PDTYSCG 243
L EE E VF K LV + +Y VL I A+R+ M +T C
Sbjct: 311 LMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICN 370
Query: 244 NTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTR 303
+ I G+C+ G+L A +IFS+MN + P N L+ C
Sbjct: 371 SLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYC------------------ 412
Query: 304 RPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLR 363
+G + A+++ + ++P+ L+ R+G + + L +
Sbjct: 413 ------------RAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWK 460
Query: 364 IVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLG 423
++ +R + E + +++AL EA L+ +LA GL N +IS LC +
Sbjct: 461 MMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKME 520
Query: 424 NLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN 483
++ A + + +N RC P TY AL H + KV N K A+ + M G P ++ YN
Sbjct: 521 KVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYN 580
Query: 484 -LVDNLLRE---HDRSDLCLKLERK-------LENHQLQKLCKLGQLDAAYEKAKSMLEK 532
L+ + + +DL ++L + + C +G +D AY M+EK
Sbjct: 581 TLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEK 640
Query: 533 GIHLSA 538
GI L+
Sbjct: 641 GITLNV 646
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 168/407 (41%), Gaps = 48/407 (11%)
Query: 172 SICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIEL--ALR 229
S + L + G +EA+ L+E + G D + N ++ LCK + E E+ +
Sbjct: 475 STLLEALFKLGDFNEAMKLWENV-LARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVN 533
Query: 230 IFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIG---ELCS 286
IF + TY + G+ ++G L A + M + G+ PT N LI +
Sbjct: 534 IFRCKPAVQTYQALSH--GYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRH 591
Query: 287 LSEKKGSVEKVRVRNTRRPCTILVPNMGG--NSGAIQPAVEVFWAVFNSGLLPSTFVVVK 344
L++ V ++R R + G N G I A + + G+ + + K
Sbjct: 592 LNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSK 651
Query: 345 LMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKAL------CDHCQ--VEEASNL 396
+ + L RL + +EA LL+ + + L GY + + L C Q E N
Sbjct: 652 IANSLFRLDKIDEACLLLQKIVDFDLLL--PGYQSLKEFLEASATTCLKTQKIAESVENS 709
Query: 397 FGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVF-ELMNKKRCLPDNLTYTALIHAHG 455
+ L L P VYN I+ LC G L+ A +F +L++ R +PD TYT LIH
Sbjct: 710 TPKKL---LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCA 766
Query: 456 KVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCK 515
+ A+ L EM G IP + TYN + ++ LCK
Sbjct: 767 IAGDINKAFTLRDEMALKGIIPNIVTYNAL------------------------IKGLCK 802
Query: 516 LGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLE 562
LG +D A + +KGI +A +T K+G + A +L E
Sbjct: 803 LGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKE 849
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 113/518 (21%), Positives = 207/518 (39%), Gaps = 80/518 (15%)
Query: 88 VLDRYKG--DLSSNF---VLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADF 142
VL RY+ DLS +F +L ++ L L F+ A Q F+ D M
Sbjct: 54 VLGRYEALHDLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHI 113
Query: 143 LGRRKLFDDMKCLL--MTVASQKGKV--------------SPKAMSICIRFLGRHGRIHE 186
L R + + K L + + G V SP + ++ G +
Sbjct: 114 LSRARNYQQTKSYLCELVALNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKN 173
Query: 187 ALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM----ESPDTYSC 242
AL +F+ M +G P L N++L L +K + +AL ++ +M SPD ++C
Sbjct: 174 ALHVFDNMGN-YGRIPSLLSCNSLLSNLVRKGENF----VALHVYDQMISFEVSPDVFTC 228
Query: 243 GNTIVGFCRLGRLGAALEIFSQMNK--IGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVR 300
+ +CR G + A+ +F++ + +G+ N LI + + +G +R+
Sbjct: 229 SIVVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLM 287
Query: 301 NTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVK 360
+ R G+ + L+ C+ G EEA
Sbjct: 288 SER------------------------------GVSRNVVTYTSLIKGYCKKGLMEEAEH 317
Query: 361 LLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLC 420
+ +++E+KL + Y ++M C Q+ +A + M+ G++ + NS+I+ C
Sbjct: 318 VFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYC 377
Query: 421 TLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQ 480
G L A +F MN PD+ TY L+ + + A L +M +P +
Sbjct: 378 KSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVM 437
Query: 481 TYNLVDNLLREHDR--------SDLCLKLERKLENHQ------LQKLCKLGQLDAAYEKA 526
TYN+ LL+ + R S + L+R + + L+ L KLG + A +
Sbjct: 438 TYNI---LLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLW 494
Query: 527 KSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETT 564
+++L +G+ + K K+ A+++L+
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNV 532
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 176/422 (41%), Gaps = 27/422 (6%)
Query: 85 IDHVLDRYKGDLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLG 144
++ LD DL++ V ++L Q+ + FF+WAG Q + + M D L
Sbjct: 112 MEKALDESSVDLTTPVVCKILQRLQYEEKT-AFRFFTWAGHQEHYSHEPIAYNEMIDILS 170
Query: 145 RRKLFDDMKCLLMTVAS--QKGKVSPKAMSICIRFLGRH-GRIHEALSLFEEMETV-FGC 200
K + +++ + ++ + + + + L ++ R + F + + +
Sbjct: 171 STKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLTHVQKFAKRKRIRVKT 230
Query: 201 KPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALE 260
+P+ FN +L LCK +E L R+ H+++ PD + G+CR+ A++
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVK-PDANTFNVLFFGWCRVRDPKKAMK 289
Query: 261 IFSQMNKIGVLPTRSAVNMLIGELC------------SLSEKKGSVEKVRVRNTRRPCTI 308
+ +M + G P I C KGS T + +
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSA---PTAKTFAL 346
Query: 309 LVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEER 368
++ + N A + E+ + ++G LP ++ +C + +EA K L + +
Sbjct: 347 MIVALAKNDKA-EECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNK 405
Query: 369 KLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHA 428
Y ++ LC++ + +EA L+GRM+ P + YN +ISM + + D A
Sbjct: 406 GYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGA 465
Query: 429 MGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGW-IPELQTYNLVDN 487
+ M+K+ C+ D TY A+I+ K A LL E++ G +P Y + D+
Sbjct: 466 FNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLP----YRVFDS 521
Query: 488 LL 489
L
Sbjct: 522 FL 523
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 130/327 (39%), Gaps = 36/327 (11%)
Query: 267 KIGVLPTRSAVNMLIGELCSLS-EKKGSVEKVRVRNTRRP------------CTILVPNM 313
++ P +A NML+ LC K+G R+R+ +P C + P
Sbjct: 227 RVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDP-- 284
Query: 314 GGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTC- 372
+ A+++ + +G P F + C+ G +EA L + +
Sbjct: 285 -------KKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVS 337
Query: 373 --VEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMG 430
+ +A+++ AL + + EE L GRM++ G P + Y VI +C +D A
Sbjct: 338 APTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYK 397
Query: 431 VFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLR 490
+ M+ K PD +TY + + + A L M+ P +QTYN++ ++
Sbjct: 398 FLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFF 457
Query: 491 EHDRSDLCLKLERKLEN----HQLQKLCKL--GQLDAAYEKA-----KSMLEKGIHLSAY 539
E D D +++ ++ C + G D K + ++ KG+ L
Sbjct: 458 EMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYR 517
Query: 540 ARDTFEHVFQKNGKLKIARQLLETTRR 566
D+F + G LK ++ E ++
Sbjct: 518 VFDSFLMRLSEVGNLKAIHKVSEHMKK 544
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 189/440 (42%), Gaps = 33/440 (7%)
Query: 82 DTAIDHVLDRYKGDLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMAD 141
D+ ++ +L+ LS + VL + G L+ F WA Q GF+ S + +
Sbjct: 78 DSKVETLLNEASVKLSPALIEEVLKKLSNAG-VLALSVFKWAENQKGFKHTTSNYNALIE 136
Query: 142 FLGRRKLFDDMKCLLMTVASQKGK--VSPKAMSICIRFLGRHGRIHEALSLFEEMETVFG 199
LG+ K F K + V K K +S + ++ R R ++ EA+ F +ME FG
Sbjct: 137 SLGKIKQF---KLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKMEE-FG 192
Query: 200 CKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKME----SPDTYSCGNTIVGFCRLGRL 255
K ++ FN +L L K ++ + A ++F KM+ PD S + G+ + L
Sbjct: 193 FKMESSDFNRMLDTLSKSRN----VGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNL 248
Query: 256 GAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV---EKVRVRNTRRPCTIL--V 310
E+ +M G P A ++I C + + ++ ++ RN + I +
Sbjct: 249 LRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSL 308
Query: 311 PNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKL 370
N G+ + A+E F +SG L+ C + E+A K V+E +L
Sbjct: 309 INGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYK---TVDEMRL 365
Query: 371 TCV---EEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDH 427
V Y I++ L + +EA ++ M +C +P + Y ++ M C LD
Sbjct: 366 KGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM-SC--EPTVSTYEIMVRMFCNKERLDM 422
Query: 428 AMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDN 487
A+ +++ M K LP +++LI A A + EML +G P ++ +
Sbjct: 423 AIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQ 482
Query: 488 LLREHDR----SDLCLKLER 503
L + R +DL +K++R
Sbjct: 483 TLLDEGRKDKVTDLVVKMDR 502
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 161/389 (41%), Gaps = 28/389 (7%)
Query: 165 KVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETI 224
K+SP + ++ L G + ALS+F+ E G K +N ++ L K + +
Sbjct: 91 KLSPALIEEVLKKLSNAGVL--ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIW 148
Query: 225 ELALRI-FHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGE 283
L + K+ S +T++ + + R ++ A+ F +M + G S N ++
Sbjct: 149 SLVDDMKAKKLLSKETFALISR--RYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDT 206
Query: 284 LCSLSEKKGSVEKV-------RVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLL 336
L S S G +KV R + TIL+ G ++ EV + + G
Sbjct: 207 L-SKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLR-VDEVNREMKDEGFE 264
Query: 337 PSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNL 396
P +++ C+ + EEA++ +E+R + ++ L ++ +A
Sbjct: 265 PDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEF 324
Query: 397 FGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGK 456
F R + G + YN+++ C ++ A + M K P+ TY ++H +
Sbjct: 325 FERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIR 384
Query: 457 VKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLE---------- 506
++ K AY++ M P + TY ++ + +R D+ +K+ +++
Sbjct: 385 MQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHM 441
Query: 507 -NHQLQKLCKLGQLDAAYEKAKSMLEKGI 534
+ + LC +LD A E ML+ GI
Sbjct: 442 FSSLITALCHENKLDEACEYFNEMLDVGI 470
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 140/327 (42%), Gaps = 25/327 (7%)
Query: 126 QMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIH 185
+ GF+ + S M D L + + D + + + ++ + K+ +I + G+ +
Sbjct: 190 EFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLL 249
Query: 186 EALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES----PDTYS 241
+ EM+ G +PD + + ++ CK + EE A+R F++ME P +
Sbjct: 250 RVDEVNREMKDE-GFEPDVVAYGIIINAHCKAKKYEE----AIRFFNEMEQRNCKPSPHI 304
Query: 242 CGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC---SLSEKKGSVEKVR 298
+ I G +L ALE F + G N L+G C + + +V+++R
Sbjct: 305 FCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMR 364
Query: 299 VRN---TRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQT 355
++ R I++ ++ + + A EV+ + + + ++V++ RL
Sbjct: 365 LKGVGPNARTYDIILHHLIRMQRS-KEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMA 423
Query: 356 EEAVKLLRIVEERKLTCVEEG---YAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVY 412
++I +E K V G ++ ++ ALC +++EA F ML G++P ++
Sbjct: 424 ------IKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMF 477
Query: 413 NSVISMLCTLGNLDHAMGVFELMNKKR 439
+ + L G D + M++ R
Sbjct: 478 SRLKQTLLDEGRKDKVTDLVVKMDRLR 504
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 151/366 (41%), Gaps = 41/366 (11%)
Query: 162 QKGKVSPKAMSICIRFLG--RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYV-----L 214
++ +SP ++ G + G + A+SL++EM V + N V Y
Sbjct: 190 KRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRV------RMSLNVVTYTALIDGF 243
Query: 215 CKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTR 274
CKK + E+ R+ P++ I GF + G A++ ++M G+
Sbjct: 244 CKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDI 303
Query: 275 SAVNMLIGELCS---LSEKKGSVEKVRVRNTRRPCTILVPNMGG--NSGAIQPAVEVFWA 329
+A ++I LC L E VE + + I M SG ++ AV ++
Sbjct: 304 TAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHK 363
Query: 330 VFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEG----YAIVMKALC 385
+ G P + ++ + + GQ EA+ C+E+ Y +++ ALC
Sbjct: 364 LIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF---------CIEKANDVMYTVLIDALC 414
Query: 386 DHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNL 445
E LF ++ GL P +Y S I+ LC GNL A + M ++ L D L
Sbjct: 415 KEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLL 474
Query: 446 TYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDR-------SDLC 498
YT LI+ A + EML G P+ ++L L+R +++ SDL
Sbjct: 475 AYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDL---LIRAYEKEGNMAAASDLL 531
Query: 499 LKLERK 504
L ++R+
Sbjct: 532 LDMQRR 537
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 165/430 (38%), Gaps = 82/430 (19%)
Query: 180 RHGRIHEALSLFEEMETVFG--CKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESP 237
R+G I A + E + G CKPD + FN++ K + +E + + + K SP
Sbjct: 103 RNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSP 161
Query: 238 DTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKV 297
+ + I FC+ G L AL+ F M + + P LI C
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYC------------ 209
Query: 298 RVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEE 357
+G ++ AV ++ + + + L+ C+ G+ +
Sbjct: 210 ------------------KAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQR 251
Query: 358 AVKLL-RIVEERKLTCVEEG---YAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYN 413
A ++ R+VE+R VE Y ++ + A +ML G++ + Y
Sbjct: 252 AEEMYSRMVEDR----VEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYG 307
Query: 414 SVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGL 473
+IS LC G L A + E M K +PD + +T +++A+ K K A ++ +++
Sbjct: 308 VIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIER 367
Query: 474 GWIPELQTYN-------------------------------LVDNLLREHDR-------- 494
G+ P++ + L+D L +E D
Sbjct: 368 GFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFS 427
Query: 495 --SDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNG 552
S+ L ++ + + LCK G L A++ M+++G+ L A T + G
Sbjct: 428 KISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKG 487
Query: 553 KLKIARQLLE 562
+ ARQ+ +
Sbjct: 488 LMVEARQVFD 497
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 13/178 (7%)
Query: 404 GLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAH---GKVKNW 460
G P +NSV+S +C LG + A + M + C PD ++Y +LI H G +++
Sbjct: 51 GYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA 110
Query: 461 KVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSD----------LCLKLERKLENHQL 510
+ + L G P++ ++N + N + D C + +
Sbjct: 111 SLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWI 170
Query: 511 QKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTRRVQ 568
CK G+L A + SM + + + K G L++A L + RRV+
Sbjct: 171 DTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVR 228
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 137/316 (43%), Gaps = 31/316 (9%)
Query: 171 MSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRI 230
+I ++ ++G I+ A + EEM+ P+++ ++ ++ L S+E +EL +
Sbjct: 199 FNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDM 258
Query: 231 FHKME-SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSE 289
K SPD + I GFCR G + A +I M K G P + L+ C +
Sbjct: 259 ISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKV-- 316
Query: 290 KKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSEL 349
G IQ A + F V +GL T LM+
Sbjct: 317 ----------------------------GKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCF 348
Query: 350 CRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKL 409
CR G+T+EA+KLL ++ + Y ++++ L + EEA + + + G+
Sbjct: 349 CRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNK 408
Query: 410 GVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLME 469
G Y +++ LC G L+ A+ +M+++ P + T+ L+ + ++ +L+
Sbjct: 409 GSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIG 468
Query: 470 MLGLGWIPELQTYNLV 485
L +G IP +++ V
Sbjct: 469 FLRIGLIPGPKSWGAV 484
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 22/268 (8%)
Query: 181 HGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKME----S 236
H R EA+ LFE+M + G PD + FN ++ C+ +E A +I M+ +
Sbjct: 245 HSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGE----VERAKKILDFMKKNGCN 300
Query: 237 PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKK----- 291
P+ Y+ + GFC++G++ A + F ++ K G+ L+ C E
Sbjct: 301 PNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKL 360
Query: 292 -GSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVF--WAVFNSGLLPSTFVVVKLMSE 348
G ++ R R +++ + + G + A+++ W L ++ ++ ++
Sbjct: 361 LGEMKASRCRADTLTYNVILRGLS-SEGRSEEALQMLDQWGSEGVHLNKGSYRII--LNA 417
Query: 349 LCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPK 408
LC G+ E+AVK L ++ ER + + ++ LC+ E + L GL P
Sbjct: 418 LCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPG 477
Query: 409 LGVYNSVISMLCTLGNLDHAMGVFELMN 436
+ +V+ +C L H VFEL++
Sbjct: 478 PKSWGAVVESICKERKLVH---VFELLD 502
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 99/231 (42%), Gaps = 13/231 (5%)
Query: 317 SGAIQPAVEVFWAVFNSGL-LPSTFVVVKLMSELCRLGQTEEAVKLLR-IVEERKLTCVE 374
+G I A V + SG+ P++ LM L +++EAV+L ++ + ++
Sbjct: 209 NGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDP 268
Query: 375 EGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFEL 434
+ +++ C +VE A + M G P + Y+++++ C +G + A F+
Sbjct: 269 VTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDE 328
Query: 435 MNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDR 494
+ K D + YT L++ + A LL EM + TYN++ L R
Sbjct: 329 VKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGR 388
Query: 495 SDLCLKLERKLENHQ-----------LQKLCKLGQLDAAYEKAKSMLEKGI 534
S+ L++ + + L LC G+L+ A + M E+GI
Sbjct: 389 SEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGI 439
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 148/388 (38%), Gaps = 49/388 (12%)
Query: 166 VSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIE 225
V+P + + I + G +A + +EM G P +N + LC ++ E
Sbjct: 306 VTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNA-GIYPTTSTYNIYICALCDFGRIDDARE 364
Query: 226 LALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC 285
L M +PD S + G+ ++G+ A +F + + P+ N LI LC
Sbjct: 365 L----LSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLC 420
Query: 286 SLSEKKGSVEKVRVRNTRRPCTILVPNMGG---------NSGAIQPAVEVFWAVFNSGLL 336
+ G++E + ++ P++ +G + A EV+ + G+
Sbjct: 421 ----ESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK 476
Query: 337 PSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEG----YAIVMKALCDHCQVEE 392
P + RLG +++A R+ EE T Y + + LC + +
Sbjct: 477 PDGYAYTTRAVGELRLGDSDKA---FRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVK 533
Query: 393 ASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIH 452
A ++ GL P Y +VI G A +++ M +KR P +TY LI+
Sbjct: 534 AIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIY 593
Query: 453 AHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQK 512
H K + A+ EM G P + T+N + L
Sbjct: 594 GHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNAL------------------------LYG 629
Query: 513 LCKLGQLDAAYEKAKSMLEKGIHLSAYA 540
+CK G +D AY M E+GI + Y+
Sbjct: 630 MCKAGNIDEAYRYLCKMEEEGIPPNKYS 657
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 158/408 (38%), Gaps = 49/408 (12%)
Query: 172 SICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIF 231
+I ++ L +++A +++E M G P + FN +L K E ++ L +
Sbjct: 207 NIVLKVLRDSRMMNKASAVYETM-IEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMK 265
Query: 232 HKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKK 291
+ + I GF + G++ A M + G T + N LI C
Sbjct: 266 RRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCK----- 320
Query: 292 GSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCR 351
G A V + N+G+ P+T + LC
Sbjct: 321 -------------------------QGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD 355
Query: 352 LGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGV 411
G+ ++A +LL + + Y +M + EAS LF + A + P +
Sbjct: 356 FGRIDDARELLSSMAAPDVV----SYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 411
Query: 412 YNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEML 471
YN++I LC GNL+ A + E M + PD +TYT L+ K N +A ++ EML
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471
Query: 472 GLGWIPELQTYNL-VDNLLREHDRSDLCLKLERKL------------ENHQLQKLCKLGQ 518
G P+ Y LR D SD +L ++ N ++ LCK+G
Sbjct: 472 RKGIKPDGYAYTTRAVGELRLGD-SDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGN 530
Query: 519 LDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTRR 566
L A E + + G+ T + +NG+ K+AR L + R
Sbjct: 531 LVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLR 578
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 157/365 (43%), Gaps = 17/365 (4%)
Query: 150 DDMKCLLMTVASQKGKVSPKAMSICIRFLG--RHGRIHEALSLFEEMETVFGCKPDNLVF 207
DD + LL ++A+ P +S G + G+ EA LF+++ P + +
Sbjct: 360 DDARELLSSMAA------PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAG-DIHPSIVTY 412
Query: 208 NNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNK 267
N ++ LC+ + E L + ++ PD + + GF + G L A E++ +M +
Sbjct: 413 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 472
Query: 268 IGVLPTRSAVNM-LIGEL-CSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNS----GAIQ 321
G+ P A +GEL S+K + + V + + N+ + G +
Sbjct: 473 KGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLV 532
Query: 322 PAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVM 381
A+E +F GL+P ++ GQ + A L + ++L Y +++
Sbjct: 533 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLI 592
Query: 382 KALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCL 441
++E+A M G++P + +N+++ +C GN+D A M ++
Sbjct: 593 YGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIP 652
Query: 442 PDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN-LVDNLLREHDRSDLCLK 500
P+ +YT LI + + W+ L EML P+ T+ L +L ++H+ ++
Sbjct: 653 PNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEF- 711
Query: 501 LERKL 505
LER L
Sbjct: 712 LERLL 716
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 108/258 (41%), Gaps = 7/258 (2%)
Query: 202 PDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEI 261
PD+ + V+ L K + + L I P N I G C+ GR +L++
Sbjct: 437 PDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKL 496
Query: 262 FSQMNKIGVLPTRSAVNMLIG---ELCSLSEKKGSVEKVRVRNTR---RPCTILVPNMGG 315
+M GV P++ +N + G E C ++K+R + T LV +
Sbjct: 497 LGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCE 556
Query: 316 NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEE 375
N A+ A + V G L + L + + ++L R +
Sbjct: 557 NGRAVD-ACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVI 615
Query: 376 GYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELM 435
Y +++KALC C+ EA LF M++ GLKP + YNS+I C G +D + M
Sbjct: 616 AYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRM 675
Query: 436 NKKRCLPDNLTYTALIHA 453
+ PD +TYT+LIH
Sbjct: 676 YEDEKNPDVITYTSLIHG 693
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 183/436 (41%), Gaps = 38/436 (8%)
Query: 95 DLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKC 154
+L++ V VL ++ G A FF+WA Q G++ D MA L R + +K
Sbjct: 70 ELNTKVVETVLNGFKRWGLAYL--FFNWASKQEGYRNDMYAYNAMASILSRARQNASLKA 127
Query: 155 LLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVL 214
L++ V + + +SP A IR LG G + EA S+F+ + + C P+ +N +L +
Sbjct: 128 LVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAI 187
Query: 215 CKKQSSEETIELALRIFHKMESP----DTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGV 270
K SS ++EL +M D ++ + +C G+ AL +F+++ G
Sbjct: 188 SKSNSS--SVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGW 245
Query: 271 LPTRSAVNMLIGELCSLSEKKGSVEKVR------VRNTRRPCTILVPNMGGNSGAIQPAV 324
L + +L+ C + + E + +R + +L+ S I A
Sbjct: 246 LDEHIST-ILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKES-RIDKAF 303
Query: 325 EVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKAL 384
++F + G+ + L+ LC+ E A+ L E K + + I+ K L
Sbjct: 304 QLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYL---EIKRSGIPPDRGILGKLL 360
Query: 385 CDHCQVEEASNLFGRMLA-CGLKPKLGVYNSVI-------------SMLCTLGNLDHAMG 430
C + E S + ++ K + +Y S+ S + L + G
Sbjct: 361 CSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDG 420
Query: 431 VFELM-----NKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLV 485
V E++ + K LPD+ + + +I+ K +A LL +++ G IP YN +
Sbjct: 421 VSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNI 480
Query: 486 DNLLREHDRSDLCLKL 501
+ + RS+ LKL
Sbjct: 481 IEGMCKEGRSEESLKL 496
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 157/372 (42%), Gaps = 36/372 (9%)
Query: 182 GRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYS 241
G EA LF+E D + +N L K EE IEL + K +PD +
Sbjct: 375 GNFSEAYDLFKEFRET-NISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVIN 433
Query: 242 CGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRN 301
I G C G+ A ++ +M+ G P N+L G L + + + E +++
Sbjct: 434 YTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMME 493
Query: 302 TR--RPCTILVPNMGG----NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQT 355
R +P T + NM ++G + A E F+ + +VK C G
Sbjct: 494 NRGVKP-TYVTHNMVIEGLIDAGELDKA-EAFYESLEHKSRENDASMVK---GFCAAGCL 548
Query: 356 EEAV-KLLRIVEERKLTCVEEGYAIVMKALC-DHCQVEEASNLFGRMLACGLKPKLGVYN 413
+ A + +R+ + + Y + +LC + + +A +L RM G++P+ +Y
Sbjct: 549 DHAFERFIRL----EFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYG 604
Query: 414 SVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGL 473
+I C + N+ A FE++ K+ +PD TYT +I+ + ++ K AY L +M
Sbjct: 605 KLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRR 664
Query: 474 GWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQ-----------LQKLCKLGQLDAA 522
P++ TY+++ N SD L ++R++E + + C L L
Sbjct: 665 DVKPDVVTYSVLLN-------SDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKV 717
Query: 523 YEKAKSMLEKGI 534
Y K M + I
Sbjct: 718 YALFKDMKRREI 729
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 137/339 (40%), Gaps = 45/339 (13%)
Query: 202 PDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEI 261
P ++ F + +K + +L R++ P+ G I +CR+ + A E
Sbjct: 563 PKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREF 622
Query: 262 FSQMNKIGVLPTRSAVNMLIGELCSLSEKKGS---VEKVRVRNTRRPCTILVPNMGGNSG 318
F + ++P ++I C L+E K + E ++ R+ + ++ ++ NS
Sbjct: 623 FEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKP--DVVTYSVLLNS- 679
Query: 319 AIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYA 378
P +++ + ++P +++ C L ++ L + ++ R++ Y
Sbjct: 680 --DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYT 737
Query: 379 IVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKK 438
+++K + NL M A +KP + Y +I C +G+L A +F+ M +
Sbjct: 738 VLLKN-------KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIES 790
Query: 439 RCLPDNLTYTALIH---AHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRS 495
PD YTALI G +K K+ +D ++E G P++ Y +
Sbjct: 791 GVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIES---GVKPDVVPYTAL---------- 837
Query: 496 DLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGI 534
+ C+ G + A + K MLEKGI
Sbjct: 838 --------------IAGCCRNGFVLKAVKLVKEMLEKGI 862
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 115/277 (41%), Gaps = 18/277 (6%)
Query: 221 EETIELALRIFHKM-ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNM 279
+E I++ R ++ + +PD + I GR + F ++ ++G L + +
Sbjct: 163 DEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLG-LDADAHTYV 221
Query: 280 LIGELCSLSEKKGSVEKVRVR----NTRRPCTILVPNMGG---------NSGAIQPAVEV 326
L+ + ++ K +EK+ R TR PC + + G +QP +
Sbjct: 222 LVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDA 281
Query: 327 FWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCD 386
V S L K++ LC + E+A ++ +E+ + Y+ +++
Sbjct: 282 NILVDKSDL---GIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRK 338
Query: 387 HCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLT 446
+ + +A ++F +ML + + +S++ C +GN A +F+ + D +
Sbjct: 339 NMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVC 398
Query: 447 YTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN 483
Y A GK+ + A +L EM G G P++ Y
Sbjct: 399 YNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYT 435
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 97/244 (39%), Gaps = 15/244 (6%)
Query: 205 LVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQ 264
+ + V+ LC + E+ + L + PD Y I G + + A+++F++
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 265 MNKIGVLPTRSAVNMLIG--------ELCSLSEKKGSVEKVRVRNTR--RPCTILVPNMG 314
M L R +N +I ++ + SE ++ R N R C + +
Sbjct: 352 M-----LKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDAL 406
Query: 315 GNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVE 374
G G ++ A+E+F + G+ P L+ C G+ +A L+ ++ T
Sbjct: 407 GKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDI 466
Query: 375 EGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFEL 434
Y ++ L + +EA M G+KP +N VI L G LD A +E
Sbjct: 467 VIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYES 526
Query: 435 MNKK 438
+ K
Sbjct: 527 LEHK 530
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 149/373 (39%), Gaps = 10/373 (2%)
Query: 126 QMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIH 185
+MG+ D + + D L ++ L + + Q +++ + I R R
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 186 EALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNT 245
EAL +F M ++G KPD F V+ V + EE + L R+F PD +
Sbjct: 514 EALKVFRLM-GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTL 572
Query: 246 IVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGEL--CSLSEKKGSVEKVRVRNTR 303
I FC+ + L++F M + + + N++I L C E +
Sbjct: 573 IDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 632
Query: 304 RPCTILVPNMGGNSGAIQ---PAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVK 360
P + M +++ A +F + + P+T + L+ LC+ + A++
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 692
Query: 361 LLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLC 420
+ I+ E+ Y +M +E + LF M G+ P + Y+ +I LC
Sbjct: 693 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 752
Query: 421 TLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQ 480
G +D A +F + LPD + Y LI + KV A L ML G P+
Sbjct: 753 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD-- 810
Query: 481 TYNLVDNLLREHD 493
+L+ L E++
Sbjct: 811 --DLLQRALSEYN 821
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 145/352 (41%), Gaps = 42/352 (11%)
Query: 182 GRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYS 241
G + +L+E+M + G PD +++ ++ L K+ + ++++ + +
Sbjct: 440 GNLRSGFALYEDMIKM-GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV 498
Query: 242 CGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRN 301
+ I G+CRL R AL++F M G+ P + +V +V +
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT--------------TVMRVSIME 544
Query: 302 TRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKL 361
R ++ A+ +F+ +F GL P L+ C+ + ++L
Sbjct: 545 GR----------------LEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQL 588
Query: 362 LRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCT 421
+++ K++ +V+ L ++E+AS F ++ ++P + YN++I C+
Sbjct: 589 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 648
Query: 422 LGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQT 481
L LD A +FEL+ P+ +T T LIH K + A + M G P T
Sbjct: 649 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT 708
Query: 482 YNLVDNLLREHDRSDLCLKLERKLENHQLQK-----------LCKLGQLDAA 522
Y + + + + KL +++ + LCK G++D A
Sbjct: 709 YGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 760
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 145/375 (38%), Gaps = 41/375 (10%)
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAA 258
G P+ + + ++ LC+ E + +I + P + + I GFC+ G L +
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 259 LEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSG 318
++ M K+G P +L+ L K+G +++ M +
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGL----SKQG---------------LMLHAMRFSVK 486
Query: 319 AIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYA 378
+ ++ + VFNS L+ CRL + +EA+K+ R++ + +
Sbjct: 487 MLGQSIRLNVVVFNS-----------LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Query: 379 IVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKK 438
VM+ ++EEA LF RM GL+P Y ++I C + +F+LM +
Sbjct: 536 TVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595
Query: 439 RCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVD------NLLREH 492
+ D +IH K + A ++ P++ TYN + L E
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 655
Query: 493 DRSDLCLKLERKLENHQ-----LQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHV 547
+R LK+ N + LCK +D A M EKG +A
Sbjct: 656 ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDW 715
Query: 548 FQKNGKLKIARQLLE 562
F K+ ++ + +L E
Sbjct: 716 FSKSVDIEGSFKLFE 730
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 114/284 (40%), Gaps = 46/284 (16%)
Query: 320 IQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKL-------TC 372
I+ A + V + G P+ L++ C+ G+ + A L +++E+R + +
Sbjct: 267 IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYST 326
Query: 373 VEEGY------------------------AIVMKALCD----HCQVEEASNLFGRMLACG 404
+ +GY +V + D + AS ++ RML G
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 405 LKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAY 464
+ P + Y +I LC G + A G++ + K+ P +TY++LI K N + +
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 465 DLLMEMLGLGWIPELQTYN-LVDNLLREH----------DRSDLCLKLERKLENHQLQKL 513
L +M+ +G+ P++ Y LVD L ++ ++L + N +
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 514 CKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIA 557
C+L + D A + + M GI T V G+L+ A
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/417 (20%), Positives = 171/417 (41%), Gaps = 34/417 (8%)
Query: 178 LGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKME-- 235
+ + + +SLF +E + G D F ++ C+ + LAL KM
Sbjct: 89 IAKLNKYEAVISLFRHLE-MLGISHDLYSFTTLIDCFCRCAR----LSLALSCLGKMMKL 143
Query: 236 --SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGS 293
P + G+ + GFC + R A+ + Q+ +G P N +I LC + +
Sbjct: 144 GFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTA 203
Query: 294 VE------KVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMS 347
++ K+ +R L+ + +SG + + + G+ P L+
Sbjct: 204 LDVLKHMKKMGIRPDVVTYNSLITRLF-HSGTWGVSARILSDMMRMGISPDVITFSALID 262
Query: 348 ELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKP 407
+ GQ EA K + +R + Y ++ LC H ++EA + +++ G P
Sbjct: 263 VYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFP 322
Query: 408 KLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLL 467
YN++I+ C +D M + +M++ D TY L + + + A +L
Sbjct: 323 NAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVL 382
Query: 468 MEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLE-----------NHQLQKLCKL 516
M+ G P++ T+N++ + L +H + L L+ N ++ LCK
Sbjct: 383 GRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKA 442
Query: 517 GQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNG--KLKIARQLLETTRRVQEPE 571
+++ A+ S+ KG+ + D ++ G + ++ R+ E R++Q+ +
Sbjct: 443 DKVEDAWYLFCSLALKGV-----SPDVITYITMMIGLRRKRLWREAHELYRKMQKED 494
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 76/170 (44%)
Query: 314 GGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCV 373
G +S A+ +F + S LPS +L+ + +L + E + L R +E ++
Sbjct: 54 GLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHD 113
Query: 374 EEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFE 433
+ ++ C ++ A + G+M+ G +P + + S+++ C + AM + +
Sbjct: 114 LYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVD 173
Query: 434 LMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN 483
+ P+ + Y +I + + A D+L M +G P++ TYN
Sbjct: 174 QIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYN 223
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 152/378 (40%), Gaps = 32/378 (8%)
Query: 126 QMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIH 185
+MGF+ D + L + + FD + +L V + + I+ G+ G +
Sbjct: 74 EMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVD 133
Query: 186 EALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNT 245
+A+ +F ++ T F C N ++ VL E+ P++ S
Sbjct: 134 KAIDVFHKI-TSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNIL 192
Query: 246 IVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRP 305
I GF AA ++F +M ++ V P+ N LIG LC RN
Sbjct: 193 IKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLC--------------RND--- 235
Query: 306 CTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIV 365
+MG ++ ++ + P+ LM LC G+ EA KL+ +
Sbjct: 236 ------DMGKAKSLLEDMIK-------KRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDM 282
Query: 366 EERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNL 425
E R Y I+M L +++EA L G M +KP + +YN +++ LCT +
Sbjct: 283 EYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRV 342
Query: 426 DHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN-L 484
A V M K C P+ TY +I +++++ ++L ML P T+ +
Sbjct: 343 PEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCM 402
Query: 485 VDNLLREHDRSDLCLKLE 502
V L++ + C LE
Sbjct: 403 VAGLIKGGNLDHACFVLE 420
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 113/248 (45%), Gaps = 13/248 (5%)
Query: 258 ALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEK----VRVRNTRRPCTILVPNM 313
AL +F Q ++G + + LI +L S +V++ VR RN R ++ M
Sbjct: 65 ALSLFHQYQEMGFRHDYPSYSSLIYKLAK-SRNFDAVDQILRLVRYRNVRCRESLF---M 120
Query: 314 G-----GNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEER 368
G G +G++ A++VF + + + + + L++ L G+ E+A ++
Sbjct: 121 GLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDM 180
Query: 369 KLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHA 428
+L + I++K D C E A +F ML ++P + YNS+I LC ++ A
Sbjct: 181 RLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKA 240
Query: 429 MGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNL 488
+ E M KKR P+ +T+ L+ + A L+ +M G P L Y ++ +
Sbjct: 241 KSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSD 300
Query: 489 LREHDRSD 496
L + R D
Sbjct: 301 LGKRGRID 308
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 150/383 (39%), Gaps = 31/383 (8%)
Query: 208 NNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNK 267
N +L+ LC + +L + + P SC N + G R+ +L A+ I M
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 268 IGVLPTRSAVNMLIGELCSLSEKK------------GSVEKVRVRNTRRPCTILVPNMGG 315
G +P NM+IG LC + GS V NT C
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMF------- 220
Query: 316 NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEE 375
+ G + A+ + +G P L+ +CR + A+++L +
Sbjct: 221 DYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIV 280
Query: 376 GYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELM 435
Y ++ C +EE +++ +L+ GL+ YN+++ LC+ D + +M
Sbjct: 281 TYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIM 340
Query: 436 NKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRS 495
+ P +TY LI+ K + A D +ML +P++ TYN V + +
Sbjct: 341 YQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMV 400
Query: 496 DLCLKLERKLE-----------NHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTF 544
D ++L L+ N + L K G + A E ML+ GI R +
Sbjct: 401 DDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSL 460
Query: 545 EHVFQKNGKLKIARQLL-ETTRR 566
+ F + ++ A Q+L ET+ R
Sbjct: 461 IYGFCRANLVEEAGQVLKETSNR 483
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 153/402 (38%), Gaps = 42/402 (10%)
Query: 143 LGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKP 202
L R D C+L + G ++ I L + G I AL L E+M ++ G P
Sbjct: 149 LARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDM-SLSGSPP 207
Query: 203 DNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIF 262
D + +N V+ + ++E+ I P + + CR A+E+
Sbjct: 208 DVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVL 267
Query: 263 SQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQP 322
M G P N L+ C ++G++E+V
Sbjct: 268 EDMAVEGCYPDIVTYNSLVNYNC----RRGNLEEV------------------------- 298
Query: 323 AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMK 382
V + + GL +T L+ LC +E ++L I+ + Y I++
Sbjct: 299 -ASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILIN 357
Query: 383 ALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLP 442
LC + A + F +ML P + YN+V+ + G +D A+ + L+ C P
Sbjct: 358 GLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPP 417
Query: 443 DNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIP-ELQTYNLVDNLLREH--DRSDLCL 499
+TY ++I K K A +L +ML G P ++ +L+ R + + + L
Sbjct: 418 GLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVL 477
Query: 500 KLERKLENH--------QLQKLCKLGQLDAAYEKAKSMLEKG 533
K N +Q LCK +++ A E + ML G
Sbjct: 478 KETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGG 519
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 113/251 (45%), Gaps = 14/251 (5%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
+ + R G + E S+ + + + G + + + +N +L+ LC + +E E+ ++
Sbjct: 286 VNYNCRRGNLEEVASVIQHILS-HGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTS 344
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV 294
P + I G C+ L A++ F QM + LP N ++G + K+G V
Sbjct: 345 YCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAM----SKEGMV 400
Query: 295 EKV-----RVRNTRRPCTILVPN--MGG--NSGAIQPAVEVFWAVFNSGLLPSTFVVVKL 345
+ ++NT P ++ N + G G ++ A+E++ + ++G+ P L
Sbjct: 401 DDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSL 460
Query: 346 MSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGL 405
+ CR EEA ++L+ R Y +V++ LC ++E A + ML G
Sbjct: 461 IYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGC 520
Query: 406 KPKLGVYNSVI 416
KP +Y +++
Sbjct: 521 KPDETIYTAIV 531
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 136/311 (43%), Gaps = 14/311 (4%)
Query: 184 IHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCG 243
I +A+ + +ME + G K D +V ++ LCK + +E+ R+ + SP+ +
Sbjct: 29 IKDAVYVAGQMEKM-GIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYS 87
Query: 244 NTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTR 303
+ I G C+ GRL A +M+ + P + LI K+G + KV
Sbjct: 88 SLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYA----KRGKLSKVDSVYKM 143
Query: 304 RPCTILVPNMGGNSGAI---------QPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQ 354
+ PN+ S I A+++ + + G P+ L + + +
Sbjct: 144 MIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSR 203
Query: 355 TEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNS 414
++ +KLL + +R + ++K +++ A +FG M + GL P + YN
Sbjct: 204 VDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNI 263
Query: 415 VISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLG 474
V++ L G ++ A+ FE M K R D +TYT +IH K K AYDL ++
Sbjct: 264 VLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKR 323
Query: 475 WIPELQTYNLV 485
P+ + Y ++
Sbjct: 324 VEPDFKAYTIM 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 102/226 (45%), Gaps = 32/226 (14%)
Query: 237 PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEK 296
PD + + + GFC + A+ + QM K+G+ +LI LC K
Sbjct: 11 PDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLC----------K 60
Query: 297 VRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTE 356
R+ + PA+EV + + G+ P+ L++ LC+ G+
Sbjct: 61 NRL--------------------VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLA 100
Query: 357 EAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVI 416
+A + L ++ +K+ ++ ++ A ++ + +++ M+ + P + Y+S+I
Sbjct: 101 DAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLI 160
Query: 417 SMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKV 462
LC +D A+ + +LM K C P+ +TY+ L A+G K+ +V
Sbjct: 161 YGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTL--ANGFFKSSRV 204
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 111/261 (42%), Gaps = 33/261 (12%)
Query: 165 KVSPKAM--SICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEE 222
K++P + S I + G++ + S+++ M P+ +++++Y LC +E
Sbjct: 113 KINPNVITFSALIDAYAKRGKLSKVDSVYKMM-IQMSIDPNVFTYSSLIYGLCMHNRVDE 171
Query: 223 TIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIG 282
I++ + K +P+ + GF + R+ +++ M + GV + N LI
Sbjct: 172 AIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLI- 230
Query: 283 ELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVV 342
KG + +G I A+ VF + ++GL+P+
Sbjct: 231 --------KGYFQ---------------------AGKIDLALGVFGYMTSNGLIPNIRSY 261
Query: 343 VKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLA 402
+++ L G+ E+A+ +++ + Y I++ +C C V+EA +LF ++
Sbjct: 262 NIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKF 321
Query: 403 CGLKPKLGVYNSVISMLCTLG 423
++P Y +I+ L G
Sbjct: 322 KRVEPDFKAYTIMIAELNRAG 342
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 6/171 (3%)
Query: 334 GLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEA 393
G+ P L++ C ++AV + +E+ + I++ LC + V A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 394 SNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHA 453
+ RM G+ P + Y+S+I+ LC G L A M+ K+ P+ +T++ALI A
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 454 H---GKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKL 501
+ GK+ Y ++++M P + TY+ + L H+R D +K+
Sbjct: 128 YAKRGKLSKVDSVYKMMIQM---SIDPNVFTYSSLIYGLCMHNRVDEAIKM 175
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 87/188 (46%), Gaps = 6/188 (3%)
Query: 317 SGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEG 376
S +I+ AV V + G+ V L+ LC+ A+++L+ +++R ++
Sbjct: 26 SNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVT 85
Query: 377 YAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMN 436
Y+ ++ LC ++ +A M + + P + ++++I G L V+++M
Sbjct: 86 YSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMI 145
Query: 437 KKRCLPDNLTYTALIHA---HGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHD 493
+ P+ TY++LI+ H +V A +L M+ G P + TY+ + N +
Sbjct: 146 QMSIDPNVFTYSSLIYGLCMHNRVDE---AIKMLDLMISKGCTPNVVTYSTLANGFFKSS 202
Query: 494 RSDLCLKL 501
R D +KL
Sbjct: 203 RVDDGIKL 210
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 145/346 (41%), Gaps = 43/346 (12%)
Query: 237 PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEK 296
P+ + C+ RL A+ + M G++P SA L+ +LC K+G+V
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLC----KRGNVGY 159
Query: 297 VRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTE 356
A+++ + + G +T L+ LC LG
Sbjct: 160 --------------------------AMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLN 193
Query: 357 EAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVI 416
++++ + + ++ L Y+ +++A +EA L ++ G +P L YN ++
Sbjct: 194 QSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLL 253
Query: 417 SMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWI 476
+ C G D AM +F + K + ++Y L+ W+ A LL EM G
Sbjct: 254 TGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRA 313
Query: 477 PELQTYNLVDNLLREHDRSDLCLKLERKLE--NHQLQ-----------KLCKLGQLDAAY 523
P + TYN++ N L H R++ L++ +++ NHQ + +LCK G++D
Sbjct: 314 PSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVV 373
Query: 524 EKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTRRVQE 569
+ M+ + + + + + N K++ A ++++ Q+
Sbjct: 374 KCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQK 419
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 150/377 (39%), Gaps = 36/377 (9%)
Query: 191 FEEMETVF--GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES----PDTYSCGN 244
F +E++ G KP+ +LY LCK ++ A+R+ M S PD +
Sbjct: 91 FSHLESLVTGGHKPNVAHSTQLLYDLCKANR----LKKAIRVIELMVSSGIIPDASAYTY 146
Query: 245 TIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRR 304
+ C+ G +G A+++ +M G N L+ LC L S++ V R
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVE----RL 202
Query: 305 PCTILVPNMGGNSGAIQP---------AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQT 355
L PN S ++ AV++ + G P+ L++ C+ G+T
Sbjct: 203 MQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRT 262
Query: 356 EEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSV 415
++A+ L R + + Y I+++ LC + EEA++L M P + YN +
Sbjct: 263 DDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNIL 322
Query: 416 ISMLCTLGNLDHAMGVFELMNK--KRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGL 473
I+ L G + A+ V + M+K + +Y +I K + L EM+
Sbjct: 323 INSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYR 382
Query: 474 GWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQ-----------LQKLCKLGQLDAA 522
P TYN + +L + + + + L N Q + LC+ G AA
Sbjct: 383 RCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAA 442
Query: 523 YEKAKSMLEKGIHLSAY 539
++ M G A+
Sbjct: 443 FQLLYEMTRCGFDPDAH 459
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 168/407 (41%), Gaps = 49/407 (12%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
+R L G ++++L E + G P+ ++ +L K++ ++E ++L I K
Sbjct: 183 VRGLCMLGSLNQSLQFVERLMQK-GLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKG 241
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV 294
P+ S + GFC+ GR A+ +F ++ G + N+L+ LC G
Sbjct: 242 GEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCC----DGRW 297
Query: 295 EKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQ 354
E+ L+ M G A P+V + + NS L G+
Sbjct: 298 EEANS---------LLAEMDGGDRA--PSVVTYNILINS---------------LAFHGR 331
Query: 355 TEEAVKLLRIVEE--RKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVY 412
TE+A+++L+ + + + Y V+ LC +V+ M+ KP G Y
Sbjct: 332 TEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTY 391
Query: 413 NSVISMLCTLGNLDHAMGVFE-LMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEML 471
N++ S+ + A + + L NK++C + Y ++I + + N A+ LL EM
Sbjct: 392 NAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDF-YKSVITSLCRKGNTFAAFQLLYEMT 450
Query: 472 GLGWIPELQTYN-LVDNLLRE------------HDRSDLCLKLERKLENHQLQKLCKLGQ 518
G+ P+ TY+ L+ L E + S+ C N + LCK+ +
Sbjct: 451 RCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNF-NAMILGLCKIRR 509
Query: 519 LDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTR 565
D A E + M+EK + +L++A+++L+ R
Sbjct: 510 TDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELR 556
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 141/336 (41%), Gaps = 23/336 (6%)
Query: 150 DDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNN 209
D+ LL + + G+ + + ++ + + GR +A++LF E+ G K + + +N
Sbjct: 228 DEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAK-GFKANVVSYNI 286
Query: 210 VLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIG 269
+L LC EE L + +P + I GR AL++ +M+K
Sbjct: 287 LLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGN 346
Query: 270 --VLPTRSAVNMLIGELCSLSEKKGSVE---KVRVRNTRRPCTILVPNMGG--------- 315
T ++ N +I LC K+G V+ K R C PN G
Sbjct: 347 HQFRVTATSYNPVIARLC----KEGKVDLVVKCLDEMIYRRCK---PNEGTYNAIGSLCE 399
Query: 316 NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEE 375
++ +Q A + ++ N + +++ LCR G T A +LL +
Sbjct: 400 HNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAH 459
Query: 376 GYAIVMKALCDHCQVEEASNLFGRMLAC-GLKPKLGVYNSVISMLCTLGNLDHAMGVFEL 434
Y+ +++ LC A + M KP + +N++I LC + D AM VFE+
Sbjct: 460 TYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEM 519
Query: 435 MNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEM 470
M +K+ +P+ TY L+ ++A ++L E+
Sbjct: 520 MVEKKRMPNETTYAILVEGIAHEDELELAKEVLDEL 555
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 170/406 (41%), Gaps = 48/406 (11%)
Query: 143 LGRRKLFDDMKCLLMTVASQKGKVSPKAMSIC--IRFLGRHGRIHEALSLFEEMETVFGC 200
LG K+FD++ +L+ + + ++ P + C I F GR AL +F+EM + C
Sbjct: 57 LGGSKMFDELDQVLLHLKTDT-RIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQ-YRC 114
Query: 201 KPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALE 260
+ + N L K E ++ L + PD + I G + G AL+
Sbjct: 115 Q-RTVKSLNSLLSALLKCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALK 173
Query: 261 IFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAI 320
+F +M K V PT LI LC S K E +++++
Sbjct: 174 LFDEMVKKKVKPTGVTFGTLIHGLCKDSRVK---EALKMKHD------------------ 212
Query: 321 QPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIV 380
++V+ G+ P+ + L+ LC++G+ A KL E K+ Y+ +
Sbjct: 213 --MLKVY------GVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTL 264
Query: 381 MKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRC 440
+ +L + E S + M G KP YN +I+ C + + A V + M +K
Sbjct: 265 ISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGL 324
Query: 441 LPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLV-DNLLREHDRSDLCL 499
PD ++Y ++ ++K W+ A L +M G P+ +Y +V D L + +
Sbjct: 325 KPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAV 384
Query: 500 KLER-----------KLENHQLQKLCKLGQLDAAYEKAKSMLEKGI 534
L+ +LE LQKLC+ G+L+ K S L +GI
Sbjct: 385 ILDEMLFKGYKPRRDRLEGF-LQKLCESGKLE-ILSKVISSLHRGI 428
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 183/452 (40%), Gaps = 54/452 (11%)
Query: 83 TAIDHVLDRYKGDLSSNFVLRVLMSYQHLGRAKTLNF-FSW---AGTQMGFQFDDSVVEY 138
T + D K +L ++ ++ G + F F W + + D V+E
Sbjct: 121 TGLSRFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEI 180
Query: 139 MADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVF 198
LGR + LL + Q+ + +A + + R G+ +A+ LFE M+ +
Sbjct: 181 FVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEM- 239
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESP----DTYSCGNTIVGFCRLGR 254
G P + +N +L V K S I L + +M S D ++C + R G
Sbjct: 240 GPSPTLVTYNVILDVFGKMGRSWRKI---LGVLDEMRSKGLKFDEFTCSTVLSACAREGL 296
Query: 255 LGAALEIFSQMNKIGVLPTRSAVNMLI-------------------------------GE 283
L A E F+++ G P N L+ E
Sbjct: 297 LREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNE 356
Query: 284 LCS------LSEKKGSVEKVRVRNTRRPCTIL---VPNMGGNSGAIQPAVEVFWAVFNSG 334
L + S++ V ++ + P I V + G +G A+++F+++ +G
Sbjct: 357 LVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAG 416
Query: 335 LLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEAS 394
+P+T ++S L + ++ E +K+L ++ + + M ALC + +++
Sbjct: 417 CVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWN-TMLALCGNKGMDKFV 475
Query: 395 N-LFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHA 453
N +F M +CG +P +N++IS G+ A ++ M + TY AL++A
Sbjct: 476 NRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNA 535
Query: 454 HGKVKNWKVAYDLLMEMLGLGWIPELQTYNLV 485
+ +W+ +++ +M G+ P +Y+L+
Sbjct: 536 LARKGDWRSGENVISDMKSKGFKPTETSYSLM 567
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 112/261 (42%), Gaps = 43/261 (16%)
Query: 248 GFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSL--SEKK--GSVEKVRVRNTR 303
+ R G+ A+++F +M ++G PT N+++ + S +K G ++++R + +
Sbjct: 219 AYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLK 278
Query: 304 R---PCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVK 360
C+ ++ + G ++ A E F + + G P T L+ + G EA+
Sbjct: 279 FDEFTCSTVL-SACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALS 337
Query: 361 LLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLC 420
+L+ +EE + C + + YN +++
Sbjct: 338 VLKEMEE------------------NSCPADSVT-----------------YNELVAAYV 362
Query: 421 TLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQ 480
G A GV E+M KK +P+ +TYT +I A+GK A L M G +P
Sbjct: 363 RAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTC 422
Query: 481 TYNLVDNLLREHDRSDLCLKL 501
TYN V +LL + RS+ +K+
Sbjct: 423 TYNAVLSLLGKKSRSNEMIKM 443
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 63/142 (44%)
Query: 326 VFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALC 385
+ ++ GL P LM R G+ +A ++L+ +E+ +L Y V+K C
Sbjct: 653 ILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFC 712
Query: 386 DHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNL 445
++EA + M G++P + YN+ +S +G V E M K C P+ L
Sbjct: 713 RRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNEL 772
Query: 446 TYTALIHAHGKVKNWKVAYDLL 467
T+ ++ + + + A D +
Sbjct: 773 TFKMVVDGYCRAGKYSEAMDFV 794
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 175/422 (41%), Gaps = 30/422 (7%)
Query: 80 PGDTAIDHVLDRYKGDLSSNFVLRVLMSYQHLGR-AKTLNFFSWAGTQMGFQFDDSVVEY 138
P +I LD +K LS N V + G ++L F + Q+ + ++ +
Sbjct: 87 PPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTI 146
Query: 139 MADFLGRRKLFDDMKCL--LMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMET 196
M LGR L D KCL + SQ S + + I GR+GR +L L + M+
Sbjct: 147 MISLLGREGLLD--KCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKN 204
Query: 197 VFGCKPDNLVFNNVLYVLCKKQ-SSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRL 255
P L +N V+ + E + L + H+ PD + NT++ C + L
Sbjct: 205 E-KISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTY-NTLLSACAIRGL 262
Query: 256 GAALE-IFSQMNKIGVLPTRSAVNMLI---GELCSLSE---------KKGSVEKVRVRNT 302
G E +F MN G++P + + L+ G+L L + GS+ + N
Sbjct: 263 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYN- 321
Query: 303 RRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLL 362
++ SG+I+ A+ VF + +G P+ L++ + G+ ++ +L
Sbjct: 322 ------VLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Query: 363 RIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTL 422
++ Y I+++ + +E LF M+ ++P + Y +I C
Sbjct: 376 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII-FACGK 434
Query: 423 GNL-DHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQT 481
G L + A + + M +P + YT +I A G+ ++ A M +G P ++T
Sbjct: 435 GGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 494
Query: 482 YN 483
++
Sbjct: 495 FH 496
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 136/333 (40%), Gaps = 37/333 (11%)
Query: 163 KGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEE 222
K K+S ++ + G +L LF+ M+ CKP+ ++ ++ +L + E
Sbjct: 100 KNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGR----EG 155
Query: 223 TIELALRIFHKMESP----DTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVN 278
++ L +F +M S +S I + R GR +LE+ +M + P+ N
Sbjct: 156 LLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYN 215
Query: 279 MLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPS 338
+I C+ +G ++ + + +F + + G+ P
Sbjct: 216 TVINA-CA----RGGLD------------------------WEGLLGLFAEMRHEGIQPD 246
Query: 339 TFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFG 398
L+S G +EA + R + + + Y+ +++ ++E+ +L G
Sbjct: 247 IVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLG 306
Query: 399 RMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVK 458
M + G P + YN ++ G++ AMGVF M C P+ TY+ L++ G+
Sbjct: 307 EMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSG 366
Query: 459 NWKVAYDLLMEMLGLGWIPELQTYNLVDNLLRE 491
+ L +EM P+ TYN++ + E
Sbjct: 367 RYDDVRQLFLEMKSSNTDPDAATYNILIEVFGE 399
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 115/267 (43%), Gaps = 27/267 (10%)
Query: 307 TILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVE 366
TI++ ++ G G + +EVF + + G+ S F L++ R G+ E +++LL ++
Sbjct: 145 TIMI-SLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 367 ERKLTCVEEGYAIVMKALC-DHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNL 425
K++ Y V+ A E LF M G++P + YN+++S G
Sbjct: 204 NEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLG 263
Query: 426 DHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLV 485
D A VF MN +PD TY+ L+ GK++ + DLL EM G +P++ +YN++
Sbjct: 264 DEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVL 323
Query: 486 DNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFE 545
L+ K G + A M G +A
Sbjct: 324 ------------------------LEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
Query: 546 HVFQKNGKLKIARQL-LETTRRVQEPE 571
++F ++G+ RQL LE +P+
Sbjct: 360 NLFGQSGRYDDVRQLFLEMKSSNTDPD 386
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/349 (19%), Positives = 132/349 (37%), Gaps = 14/349 (4%)
Query: 132 DDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLF 191
D + ++ + G+ + + + LL +AS + ++ + + G I EA+ +F
Sbjct: 281 DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVF 340
Query: 192 EEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCR 251
+M+ GC P+ ++ +L + + ++ +L L + PD + I F
Sbjct: 341 HQMQAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGE 399
Query: 252 LGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVP 311
G + +F M + + P +I C K G E R +VP
Sbjct: 400 GGYFKEVVTLFHDMVEENIEPDMETYEGIIFA-CG---KGGLHEDARKILQYMTANDIVP 455
Query: 312 NMGGNSGAIQP---------AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLL 362
+ +G I+ A+ F + G PS L+ R G +E+ +L
Sbjct: 456 SSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAIL 515
Query: 363 RIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTL 422
+ + + + + ++A + EEA + M P +V+S+
Sbjct: 516 SRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFA 575
Query: 423 GNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEML 471
+D FE M LP + Y ++ +GK + W +LL EML
Sbjct: 576 RLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEML 624
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 133/320 (41%), Gaps = 42/320 (13%)
Query: 258 ALEIFSQMNKIGVLPTRSAVNMLIGELC---SLSEKKGSVEKVRVR---NTRRPCTILVP 311
A+E+ +M K G P L+ LC S+ + E +R+R N R ++L
Sbjct: 202 AIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYG 261
Query: 312 NMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLT 371
G + A V + +G P L+S G+ +A LLR + R
Sbjct: 262 --WCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFE 319
Query: 372 CVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGV 431
Y ++++ALC ++EEA +F M + + Y +++S C G +D V
Sbjct: 320 PNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIV 379
Query: 432 FELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLRE 491
+ M KK +P LTY ++ AH K ++++ +L+ +M + + P++ YN+V L
Sbjct: 380 LDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRL--- 436
Query: 492 HDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKN 551
CKLG++ A M E G+ DTF V N
Sbjct: 437 ---------------------ACKLGEVKEAVRLWNEMEENGLSPGV---DTF--VIMIN 470
Query: 552 GKLKIARQ--LLETTRRVQE 569
G +A Q LLE + +E
Sbjct: 471 G---LASQGCLLEASDHFKE 487
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 144/342 (42%), Gaps = 10/342 (2%)
Query: 119 FFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGK-VSPKAMSICIRF 177
FF WA Q + V + M L + + F + L+ + + + + P+ + ++
Sbjct: 133 FFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQR 192
Query: 178 LGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESP 237
+ +A+ + +EM FG +PD VF +L LCK S ++ +L + +M P
Sbjct: 193 FASADMVKKAIEVLDEMPK-FGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM--RMRFP 249
Query: 238 DTYSCGNTIV-GFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEK 296
+++ G+CR+G++ A + QMN+ G P L+ + + + +
Sbjct: 250 VNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDL 309
Query: 297 VRVRNTR--RP---CTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCR 351
+R R P C ++ ++ A++VF + L+S C+
Sbjct: 310 LRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCK 369
Query: 352 LGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGV 411
G+ ++ +L + ++ L E Y +M A EE L +M P +G+
Sbjct: 370 WGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGI 429
Query: 412 YNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHA 453
YN VI + C LG + A+ ++ M + P T+ +I+
Sbjct: 430 YNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMING 471
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 144/351 (41%), Gaps = 51/351 (14%)
Query: 178 LGRHGRIHEALSLFEEMETVFGCKPDNL-VFNNVLYVLCKKQSSEETIELALRIFHKMES 236
L +HG + +A LFE+M F P NL F ++LY C+ E + +++
Sbjct: 228 LCKHGSVKDAAKLFEDMRMRF---PVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFE 284
Query: 237 PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEK 296
PD N + G+ G++ A ++ M + G P + +LI LC + + ++ K
Sbjct: 285 PDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAM-K 343
Query: 297 VRVRNTRRPC-------TILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMS-- 347
V V R C T LV G I V + GL+PS + +M
Sbjct: 344 VFVEMERYECEADVVTYTALVSGF-CKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAH 402
Query: 348 ----------EL-----------------------CRLGQTEEAVKLLRIVEERKLTCVE 374
EL C+LG+ +EAV+L +EE L+
Sbjct: 403 EKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGV 462
Query: 375 EGYAIVMKALCDHCQVEEASNLFGRMLACGL--KPKLGVYNSVISMLCTLGNLDHAMGVF 432
+ + I++ L + EAS+ F M+ GL + G +++ + L+ A V+
Sbjct: 463 DTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVW 522
Query: 433 E-LMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTY 482
+ +K C + L++T IHA K A +EM+ + ++P+ T+
Sbjct: 523 SCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTF 573
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 113/498 (22%), Positives = 200/498 (40%), Gaps = 62/498 (12%)
Query: 93 KGDLSSNFVLRV---LMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLF 149
K DLSS+F R +S H GR KT T+ +D++ + DF G ++F
Sbjct: 129 KSDLSSDFSGRRSTRFVSKMHFGRQKTT-----MATRHSSAAEDAL-QNAIDFSGDDEMF 182
Query: 150 DDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNN 209
L+++ S+ + IR LG +A+ +E F K +
Sbjct: 183 ---HSLMLSFESKL--CGSDDCTYIIRELGNRNECDKAVGFYE-----FAVKRERRKNEQ 232
Query: 210 --VLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRL----GRLG---AALE 260
+ + + +A RIF E+ GNT+ F L GR G A+
Sbjct: 233 GKLASAMISTLGRYGKVTIAKRIF---ETAFAGGYGNTVYAFSALISAYGRSGLHEEAIS 289
Query: 261 IFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRV--------RNTRRPCTILVPN 312
+F+ M + G+ P N +I + C KG +E +V RN +P I +
Sbjct: 290 VFNSMKEYGLRPNLVTYNAVI-DACG----KGGMEFKQVAKFFDEMQRNGVQPDRITFNS 344
Query: 313 MGG---NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERK 369
+ G + A +F + N + F L+ +C+ GQ + A ++L + ++
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR 404
Query: 370 LTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAM 429
+ Y+ V+ + +EA NLFG M G+ YN+++S+ +G + A+
Sbjct: 405 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL 464
Query: 430 GVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN-LVDN- 487
+ M D +TY AL+ +GK + + EM +P L TY+ L+D
Sbjct: 465 DILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 524
Query: 488 -----------LLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHL 536
+ RE + L+ + L + + LCK G + +A M ++GI
Sbjct: 525 SKGGLYKEAMEIFREFKSAG--LRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISP 582
Query: 537 SAYARDTFEHVFQKNGKL 554
+ ++ F ++ +
Sbjct: 583 NVVTYNSIIDAFGRSATM 600
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 120/289 (41%), Gaps = 17/289 (5%)
Query: 147 KLFDDMKCLLMTVASQKGKVSPKAMSI--CIRFLGRHGRIHEALSLFEEMETVFGCKPDN 204
K FD+M Q+ V P ++ + R G A +LF+EM T + D
Sbjct: 325 KFFDEM---------QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEM-TNRRIEQDV 374
Query: 205 LVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQ 264
+N +L +CK + E+ ++ K P+ S I GF + GR AL +F +
Sbjct: 375 FSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGE 434
Query: 265 MNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNT---RRPCTILVPNMGG--NSGA 319
M +G+ R + N L+ + + +++ +R + ++ +GG G
Sbjct: 435 MRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGK 494
Query: 320 IQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAI 379
+VF + +LP+ L+ + G +EA+++ R + L Y+
Sbjct: 495 YDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSA 554
Query: 380 VMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHA 428
++ ALC + V A +L M G+ P + YNS+I +D +
Sbjct: 555 LIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS 603
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 122/291 (41%), Gaps = 22/291 (7%)
Query: 293 SVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRL 352
+V++ R +N + + + G G + A +F F G + + L+S R
Sbjct: 222 AVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRS 281
Query: 353 GQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHC-----QVEEASNLFGRMLACGLKP 407
G EEA+ + ++E L + A+ D C + ++ + F M G++P
Sbjct: 282 GLHEEAISVFNSMKEYGL----RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQP 337
Query: 408 KLGVYNSVISMLCTLGNL-DHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDL 466
+NS+++ +C+ G L + A +F+ M +R D +Y L+ A K +A+++
Sbjct: 338 DRITFNSLLA-VCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEI 396
Query: 467 LMEMLGLGWIPELQTYNLVDNLLREHDRSD-----------LCLKLERKLENHQLQKLCK 515
L +M +P + +Y+ V + + R D L + L+R N L K
Sbjct: 397 LAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTK 456
Query: 516 LGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTRR 566
+G+ + A + + M GI + + K GK +++ +R
Sbjct: 457 VGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 132/338 (39%), Gaps = 32/338 (9%)
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAA 258
G +PD + + + LC+ +E +L + K PDTY+ + C+ L
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVV 213
Query: 259 LEIFSQM-NKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNS 317
E +M + V P + +LI +C NS
Sbjct: 214 YEFVDEMRDDFDVKPDLVSFTILIDNVC------------------------------NS 243
Query: 318 GAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGY 377
++ A+ + + N+G P F+ +M C L + EAV + + ++E + + Y
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 378 AIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNK 437
++ L +VEEA M+ G +P Y S+++ +C G A+ + E M
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEA 363
Query: 438 KRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTY-NLVDNLLREHDRSD 496
+ C P++ TY L+H K + +L M G E Y LV +L++ ++
Sbjct: 364 RGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAE 423
Query: 497 LCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGI 534
+ +++ L L+ + K E+G+
Sbjct: 424 AYEVFDYAVDSKSLSDASAYSTLETTLKWLKKAKEQGL 461
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 122/301 (40%), Gaps = 30/301 (9%)
Query: 150 DDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNN 209
D+ K L+ + + + ++ L + +H +EM F KPD + F
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 210 VLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIG 269
++ +C ++ E + L ++ + PD + + GFC L + A+ ++ +M + G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 270 VLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWA 329
V P + N LI L K G VE+ R+
Sbjct: 296 VEPDQITYNTLIFGL----SKAGRVEEARM--------------------------YLKT 325
Query: 330 VFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQ 389
+ ++G P T LM+ +CR G++ A+ LL +E R + Y ++ LC
Sbjct: 326 MVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARL 385
Query: 390 VEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTA 449
+++ L+ M + G+K + Y +++ L G + A VF+ + L D Y+
Sbjct: 386 MDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYST 445
Query: 450 L 450
L
Sbjct: 446 L 446
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 102/240 (42%), Gaps = 16/240 (6%)
Query: 337 PSTFVVVKLMSELCR---LGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEA 393
P T+ L+ LC+ L E V +R + K V + I++ +C+ + EA
Sbjct: 192 PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLV--SFTILIDNVCNSKNLREA 249
Query: 394 SNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHA 453
L ++ G KP +YN+++ CTL A+GV++ M ++ PD +TY LI
Sbjct: 250 MYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFG 309
Query: 454 HGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLE------- 506
K + A L M+ G+ P+ TY + N + S L L ++E
Sbjct: 310 LSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPN 369
Query: 507 ----NHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLE 562
N L LCK +D E + M G+ L + T K+GK+ A ++ +
Sbjct: 370 DCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFD 429
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 172/426 (40%), Gaps = 72/426 (16%)
Query: 129 FQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEAL 188
+ + SV M D LG+ +MK ++ + + + IR R GR+ +A+
Sbjct: 42 YGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAI 101
Query: 189 SLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHK----MESPDTYSCGN 244
SLF+ + F C +L F+ +L + K E +E A IF K E + N
Sbjct: 102 SLFKSLHE-FNCVNWSLSFDTLLQEMVK----ESELEAACHIFRKYCYGWEVNSRITALN 156
Query: 245 TIVG-FCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC---SLSE----------- 289
++ C++ R A ++F +MN G P R + +L+ C L E
Sbjct: 157 LLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWR 216
Query: 290 --KKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGL------------ 335
+KGS E + V IL+ + ++G + A+E+ + GL
Sbjct: 217 ISQKGSGEDIVVYR------ILLDAL-CDAGEVDDAIEILGKILRKGLKAPKRCYHHIEA 269
Query: 336 -------------------------LPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKL 370
+P + ++L G+ E ++L + +
Sbjct: 270 GHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGF 329
Query: 371 TCVEEGYAIVMKALCDHCQVEEASNLFGR-MLACGLKPKLGVYNSVISMLCTLGNLDHAM 429
Y +KALC +++EA ++ + M+ P +GVYN +I LC G A+
Sbjct: 330 EPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAV 389
Query: 430 GVFELMNKK-RCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNL 488
G + M+K+ C+ + TY L+ + + A ++ EML P ++TY+++
Sbjct: 390 GYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKG 449
Query: 489 LREHDR 494
L + DR
Sbjct: 450 LCDMDR 455
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 172/426 (40%), Gaps = 72/426 (16%)
Query: 129 FQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEAL 188
+ + SV M D LG+ +MK ++ + + + IR R GR+ +A+
Sbjct: 42 YGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAI 101
Query: 189 SLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHK----MESPDTYSCGN 244
SLF+ + F C +L F+ +L + K E +E A IF K E + N
Sbjct: 102 SLFKSLHE-FNCVNWSLSFDTLLQEMVK----ESELEAACHIFRKYCYGWEVNSRITALN 156
Query: 245 TIVG-FCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC---SLSE----------- 289
++ C++ R A ++F +MN G P R + +L+ C L E
Sbjct: 157 LLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWR 216
Query: 290 --KKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGL------------ 335
+KGS E + V IL+ + ++G + A+E+ + GL
Sbjct: 217 ISQKGSGEDIVVYR------ILLDAL-CDAGEVDDAIEILGKILRKGLKAPKRCYHHIEA 269
Query: 336 -------------------------LPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKL 370
+P + ++L G+ E ++L + +
Sbjct: 270 GHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGF 329
Query: 371 TCVEEGYAIVMKALCDHCQVEEASNLFGR-MLACGLKPKLGVYNSVISMLCTLGNLDHAM 429
Y +KALC +++EA ++ + M+ P +GVYN +I LC G A+
Sbjct: 330 EPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAV 389
Query: 430 GVFELMNKK-RCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNL 488
G + M+K+ C+ + TY L+ + + A ++ EML P ++TY+++
Sbjct: 390 GYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKG 449
Query: 489 LREHDR 494
L + DR
Sbjct: 450 LCDMDR 455
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 107/544 (19%), Positives = 205/544 (37%), Gaps = 97/544 (17%)
Query: 114 AKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSI 173
A FF WAG Q G++ D + A L R F L + SQ S K I
Sbjct: 139 AVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEI 198
Query: 174 CIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVL------------------- 214
IR + R ++E+M+ FG KP ++N ++ L
Sbjct: 199 LIRMHADNRRGLRVYYVYEKMKK-FGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKED 257
Query: 215 ----------------CKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAA 258
CK EE +E+ R+ + PD ++ I G L A+
Sbjct: 258 GLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDAS 317
Query: 259 LEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEK----------VRVRNTRRPCTI 308
L ++ +M + + P A L+ LC K G VE+ ++ R +
Sbjct: 318 LRVWDEMRRDEIKPDVMAYGTLVVGLC----KDGRVERGYELFMEMKGKQILIDREIYRV 373
Query: 309 LVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEER 368
L+ + G ++ A ++ + +SG + + ++ LC + Q ++A KL ++ E
Sbjct: 374 LIEGFVAD-GKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEE 432
Query: 369 KLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACG------------------------ 404
+L E + +M A ++ + SN+ R+ G
Sbjct: 433 ELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMA 492
Query: 405 ------LKPK----LGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAH 454
LK K + VYN ++ L +G++ ++ +F M K PD+ +Y+ I
Sbjct: 493 LDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCF 552
Query: 455 GKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERK----LENHQL 510
+ + K A +++ + +P + Y + L + D + L R+ +E+ +
Sbjct: 553 VEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPM 612
Query: 511 Q--------KLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLE 562
+ +CK + + M ++G+ ++ K+G +K+AR++
Sbjct: 613 EFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFT 672
Query: 563 TTRR 566
++
Sbjct: 673 ELKK 676
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 157/357 (43%), Gaps = 32/357 (8%)
Query: 115 KTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSIC 174
K L FF+W + GF+ + D LG+ F+ L+ + V P ++
Sbjct: 63 KALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESV-PNHVTFR 121
Query: 175 I---RFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIF 231
I R++ H + EA+ +++++ F + D F N++ LC+ + E EL F
Sbjct: 122 IVFKRYVTAH-LVQEAIDAYDKLDD-FNLR-DETSFYNLVDALCEHKHVVEAEELC---F 175
Query: 232 HKMESPDTYSCGNTIV------GFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC 285
K + +S NT + G+ +LG G E + +M+ GV + ++ + +C
Sbjct: 176 GKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMC 235
Query: 286 SLSEKKGSVEKVRVRNTRR------PCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPST 339
+ +V+ + +RR ++ +G + G ++ + VF + G P+
Sbjct: 236 KSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQG-VEFGIRVFREMRERGCEPNV 294
Query: 340 FVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEAS---NL 396
++ LC G+ +A ++L E K C + + +C ++E+ S +L
Sbjct: 295 ATHNTIIKLLCEDGRMRDAYRMLD--EMPKRGCQPDS----ITYMCLFSRLEKPSEILSL 348
Query: 397 FGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHA 453
FGRM+ G++PK+ Y ++ G L + V++ M + PD+ Y A+I A
Sbjct: 349 FGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDA 405
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 155/379 (40%), Gaps = 42/379 (11%)
Query: 185 HEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES-PDTYSCG 243
+AL F +E G + FN V+ +L K E + L R+ ES P+ +
Sbjct: 62 QKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFR 121
Query: 244 NTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEK------- 296
+ + A++ + +++ + S N L+ LC E K VE
Sbjct: 122 IVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALC---EHKHVVEAEELCFGK 177
Query: 297 ------VRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNS-GLLPSTFVVVKLMSEL 349
V NT+ IL G + + +W ++ G+ F M +
Sbjct: 178 NVIGNGFSVSNTKIHNLIL---RGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIM 234
Query: 350 CRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKL 409
C+ G+ +AVKL + ++ R++ Y V++A+ VE +F M G +P +
Sbjct: 235 CKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNV 294
Query: 410 GVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLME 469
+N++I +LC G + A + + M K+ C PD++TY L K L
Sbjct: 295 ATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSE---ILSLFGR 351
Query: 470 MLGLGWIPELQTYNLVDNLLREHDRSDL---CLKLERKLE-----------NHQLQKLCK 515
M+ G P++ TY + L+R+ +R L + + ++ N + L +
Sbjct: 352 MIRSGVRPKMDTYVM---LMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQ 408
Query: 516 LGQLDAAYEKAKSMLEKGI 534
G LD A E + M+E+G+
Sbjct: 409 KGMLDMAREYEEEMIERGL 427
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 165/370 (44%), Gaps = 20/370 (5%)
Query: 129 FQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEAL 188
FQ D SV E + D L ++++ +L S G+ + K + IR L R G I +
Sbjct: 72 FQKDWSVSE-VVDRLMALNRWEEVDGVL---NSWVGRFARKNFPVLIRELSRRGCIELCV 127
Query: 189 SLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES----PDTYSCGN 244
++F+ M+ + + N++ ++ + + ++ A +F +M+ PD +
Sbjct: 128 NVFKWMKI----QKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDA 183
Query: 245 TIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVE--KVRVRNT 302
I R G+ A+ + M + + P+RS N LI S + ++E K N
Sbjct: 184 LINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNG 243
Query: 303 RRPCTI---LVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAV 359
P + +V + + A+ F + + + P T ++ L +LGQ+ +A+
Sbjct: 244 VGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQAL 303
Query: 360 KLLRIVEERKLTCVEE--GYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVIS 417
L + E++ C + + +M ++E +F M+A GLKP + YN+++
Sbjct: 304 DLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMG 363
Query: 418 MLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIP 477
G A+ V + + +PD ++YT L++++G+ + A ++ + M P
Sbjct: 364 AYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKP 423
Query: 478 ELQTYN-LVD 486
+ TYN L+D
Sbjct: 424 NVVTYNALID 433
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 131/298 (43%), Gaps = 11/298 (3%)
Query: 181 HGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTY 240
HG ALS+ +++ G PD + + +L + + + E+ L + + P+
Sbjct: 368 HGMSGTALSVLGDIKQN-GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVV 426
Query: 241 SCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVR 300
+ I + G L A+EIF QM + G+ P +V L+ CS S+KK +V+ V
Sbjct: 427 TYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA-CSRSKKKVNVDTVLSA 485
Query: 301 NTRRPCTILVPNMGG------NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQ 354
R + N+ ++ A+ ++ ++ + + L+S CR+ +
Sbjct: 486 AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSK 545
Query: 355 TEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNS 414
EA+ L+ +E+ + +E Y+ V+ A QV EA ++F +M G +P + Y S
Sbjct: 546 YPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTS 605
Query: 415 VISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAH---GKVKNWKVAYDLLME 469
++ A +F M PD++ +AL+ A G+ N V DL+ E
Sbjct: 606 MLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMRE 663
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 14/233 (6%)
Query: 345 LMSELCRLGQTEEAVKLLRIVEERKLTCVEEG-YAIVMKALCDHCQVEEASNLFGRMLAC 403
L+ EL R G E V + + ++ +K C Y ++++ H V++A LF M
Sbjct: 113 LIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKW 172
Query: 404 GLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVA 463
KP Y+++I+ G AM + + M + P TY LI+A G NW+ A
Sbjct: 173 SCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREA 232
Query: 464 YDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQK----------- 512
++ +M G P+L T+N+V + + + L ++ +++
Sbjct: 233 LEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYC 292
Query: 513 LCKLGQLDAAYEKAKSMLEKGIHL--SAYARDTFEHVFQKNGKLKIARQLLET 563
L KLGQ A + SM EK + H++ G+++ R + E
Sbjct: 293 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA 345
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 151/381 (39%), Gaps = 24/381 (6%)
Query: 87 HVLDRYKGDLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRR 146
L++ + V+ VL + G A L FFSW G + G++ + G
Sbjct: 633 EALEKSTVQFTPELVVEVLRHAKIQGNA-VLRFFSWVGKRNGYKHNSEAYNMSIKVAGCG 691
Query: 147 KLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLV 206
K F M+ L + Q ++ +I I GR G + A+ F+EM+ + G P +
Sbjct: 692 KDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDM-GLIPSSST 750
Query: 207 FNNVLYVLCKKQSSEETIELALRIFHKMES----PDTYSCGNTIVGFCRLGRLGAALEIF 262
F ++ VLC+K+ +E A R F +M PD + + C +G A
Sbjct: 751 FKCLITVLCEKKG--RNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCL 808
Query: 263 SQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGN------ 316
+ KIG P A ++ I LC + + + ++ ++ R ++L G+
Sbjct: 809 DSLGKIG-FPVTVAYSIYIRALCRIGKLEEALSELASFEGER--SLLDQYTYGSIVHGLL 865
Query: 317 -SGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEE 375
G +Q A++ ++ G P V L+ + Q E K+L ++ + E
Sbjct: 866 QRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLE---KVLETCQKMEGESCEP 922
Query: 376 GYAIVMKALCDHC---QVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVF 432
+C + +VEEA N F M G P Y+ I+ LC + A+ +
Sbjct: 923 SVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLL 982
Query: 433 ELMNKKRCLPDNLTYTALIHA 453
M K P + + + +
Sbjct: 983 SEMLDKGIAPSTINFRTVFYG 1003
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 139/337 (41%), Gaps = 40/337 (11%)
Query: 236 SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKG-SV 294
+ DT++ I+ + R G A+ F +M +G++P+ S LI LC EKKG +V
Sbjct: 712 TQDTWAI--MIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLC---EKKGRNV 766
Query: 295 EKVR------VRNTRRPCTILVPNMGG---NSGAIQPAVEVFWAVFNSGLLPSTFVVVKL 345
E+ +R+ P LV + G G + A ++ G P T
Sbjct: 767 EEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIY 825
Query: 346 MSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGL 405
+ LCR+G+ EEA+ L E + + Y ++ L +++A + M G
Sbjct: 826 IRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGT 885
Query: 406 KPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYD 465
KP + VY S+I L+ + + M + C P +TYTA+I + + + A++
Sbjct: 886 KPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWN 945
Query: 466 LLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEK 525
M G P+ +TY+ N L + +S+ LKL
Sbjct: 946 AFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKL------------------------ 981
Query: 526 AKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLE 562
ML+KGI S T + + GK +AR L+
Sbjct: 982 LSEMLDKGIAPSTINFRTVFYGLNREGKHDLARIALQ 1018
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/405 (19%), Positives = 148/405 (36%), Gaps = 45/405 (11%)
Query: 91 RYKGDLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFD 150
R++ ++ N VL+ HL + FF+W + GF + M G + D
Sbjct: 152 RFEPEIVEN-VLKRCFKVPHLA----MRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLD 206
Query: 151 DMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNV 210
+ L+ + + +I I G+ +I + L +FE+M G + D +N +
Sbjct: 207 MVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKS-GFELDATAYNIM 265
Query: 211 LYVLC-----------KKQSSEETIELALRIFH-------KMESPDTYSC---------- 242
+ LC K+ E+ I LR + K E D
Sbjct: 266 IRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICE 325
Query: 243 -------GNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVE 295
G + FC G++ ALE+ ++ + +L+ LC + ++E
Sbjct: 326 ISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALE 385
Query: 296 KVRVRNTRR--PCTILVPNMGG--NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCR 351
V + R+ + + G + A+E F + SG P ++M L +
Sbjct: 386 IVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFK 445
Query: 352 LGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGV 411
L Q E+ L + E + V+ +V EA +F M G+KP
Sbjct: 446 LKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKS 505
Query: 412 YNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGK 456
Y+ + LC D + +F M+ + + + ++ +I + K
Sbjct: 506 YSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEK 550
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 67/169 (39%), Gaps = 24/169 (14%)
Query: 404 GLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVA 463
G ++G+YN+++S+ NLD + M K C D T+T LI +GK K
Sbjct: 184 GFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKG 243
Query: 464 YDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAY 523
+ +M G+ + YN++ ++ LC G+ D A
Sbjct: 244 LLVFEKMRKSGFELDATAYNIM------------------------IRSLCIAGRGDLAL 279
Query: 524 EKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLETTRRVQEPEE 572
E K M+EKGI K+ K+ + + + + R+ E E
Sbjct: 280 EFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISE 328
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 156/372 (41%), Gaps = 50/372 (13%)
Query: 161 SQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSS 220
SQK ++P + I R+ I +AL+L +M G + D + ++ V+ L +
Sbjct: 190 SQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQD-GYQSDFVNYSLVIQSLTRSNKI 248
Query: 221 EETIELALRIFHKMESP----DTYSCGNTIVGFCRLGRLGAALEI--------------- 261
+ + LR++ ++E D + I+GF + G AL++
Sbjct: 249 DSV--MLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTAT 306
Query: 262 --------------------FSQMNKIGVLPTRSAVNMLI------GELCSLSEKKGSVE 295
F ++ + G+ P A N L+ G L +E
Sbjct: 307 LVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEME 366
Query: 296 KVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQT 355
K V ++L+ + N+G + A V + + P++FV +L++ G+
Sbjct: 367 KRGVSPDEHTYSLLI-DAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEW 425
Query: 356 EEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSV 415
++ ++L+ ++ + + Y +V+ ++ A F RML+ G++P +N++
Sbjct: 426 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTL 485
Query: 416 ISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGW 475
I C G A +FE M ++ CLP TY +I+++G + W LL +M G
Sbjct: 486 IDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGI 545
Query: 476 IPELQTY-NLVD 486
+P + T+ LVD
Sbjct: 546 LPNVVTHTTLVD 557
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 146/362 (40%), Gaps = 11/362 (3%)
Query: 143 LGRRKLFDDMKCLLMTVASQKGKVSPKAMSIC--IRFLGRHGRIHEALSLFEEMETVFGC 200
+G K D K L + +Q +S K ++ I L GR EA +LFEE+ G
Sbjct: 277 MGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQS-GI 335
Query: 201 KPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALE 260
KP +N +L K ++ + + + SPD ++ I + GR +A
Sbjct: 336 KPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARI 395
Query: 261 IFSQMNKIGVLPTRSAVNMLI------GELCSLSEKKGSVEKVRVRNTRRPCTILVPNMG 314
+ +M V P + L+ GE + ++ + V+ R+ +++ G
Sbjct: 396 VLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFG 455
Query: 315 GNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVE 374
+ A+ F + + G+ P L+ C+ G+ A ++ +E R
Sbjct: 456 -KFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCA 514
Query: 375 EGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFEL 434
Y I++ + D + ++ L G+M + G+ P + + +++ + G + A+ E
Sbjct: 515 TTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEE 574
Query: 435 MNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDR 494
M P + Y ALI+A+ + + A + M G P L N + N E DR
Sbjct: 575 MKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE-DR 633
Query: 495 SD 496
D
Sbjct: 634 RD 635
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 128/331 (38%), Gaps = 33/331 (9%)
Query: 162 QKGKVSPKAMSICIRFLG--RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQS 219
+ G V P + G G + + +EM+++ G KPD +N V+ K
Sbjct: 401 EAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI-GVKPDRQFYNVVIDTFGKFNC 459
Query: 220 SEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNM 279
+ + R+ + PD + I C+ GR A E+F M + G LP + N+
Sbjct: 460 LDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNI 519
Query: 280 LIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPST 339
+I N G+ + + + G+LP+
Sbjct: 520 MI------------------------------NSYGDQERWDDMKRLLGKMKSQGILPNV 549
Query: 340 FVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGR 399
L+ + G+ +A++ L ++ L Y ++ A E+A N F
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 609
Query: 400 MLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKN 459
M + GLKP L NS+I+ A V + M + PD +TYT L+ A +V
Sbjct: 610 MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDK 669
Query: 460 WKVAYDLLMEMLGLGWIPELQTYNLVDNLLR 490
++ + EM+ G P+ + +++ + LR
Sbjct: 670 FQKVPVVYEEMIMSGCKPDRKARSMLRSALR 700
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 131/298 (43%), Gaps = 11/298 (3%)
Query: 181 HGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTY 240
HG ALS+ +++ G PD + + +L + + + E+ L + + P+
Sbjct: 236 HGMSGTALSVLGDIKQN-GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVV 294
Query: 241 SCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVR 300
+ I + G L A+EIF QM + G+ P +V L+ CS S+KK +V+ V
Sbjct: 295 TYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA-CSRSKKKVNVDTVLSA 353
Query: 301 NTRRPCTILVPNMGG------NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQ 354
R + N+ ++ A+ ++ ++ + + L+S CR+ +
Sbjct: 354 AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSK 413
Query: 355 TEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNS 414
EA+ L+ +E+ + +E Y+ V+ A QV EA ++F +M G +P + Y S
Sbjct: 414 YPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTS 473
Query: 415 VISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAH---GKVKNWKVAYDLLME 469
++ A +F M PD++ +AL+ A G+ N V DL+ E
Sbjct: 474 MLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMRE 531
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 144/378 (38%), Gaps = 81/378 (21%)
Query: 180 RHGRIH-EALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIEL--ALR------- 229
+ GR + +ALS FE M+ +PD FN ++Y L K S + ++L ++R
Sbjct: 127 KSGRQYSKALSYFELMKGA-KVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECR 185
Query: 230 ------------------------IFHKMES----PDTYSCGNTIVGFCRLGRLGAALEI 261
+F M + P+ S + + G G AL +
Sbjct: 186 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 245
Query: 262 FSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKV--RVRNTRRPCTILVPN----MGG 315
+ + G++P + L+ S + G ++V +R RR ++ N G
Sbjct: 246 LGDIKQNGIIPDVVSYTCLLNSY-GRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYG 304
Query: 316 NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCR------------------------ 351
++G + AVE+F + G+ P+ V L++ R
Sbjct: 305 SNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTA 364
Query: 352 -----------LGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRM 400
+ E+A+ L + + ++K+ + I++ C + EA + M
Sbjct: 365 AYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 424
Query: 401 LACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNW 460
+ VY+SV+ G + A +F M C PD + YT+++HA+ + W
Sbjct: 425 EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKW 484
Query: 461 KVAYDLLMEMLGLGWIPE 478
A +L +EM G P+
Sbjct: 485 GKACELFLEMEANGIEPD 502
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 131/320 (40%), Gaps = 44/320 (13%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
IR RH + +A LF EM+ + CKPD
Sbjct: 18 IRLHARHNWVDQARGLFFEMQK-WSCKPD------------------------------- 45
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV 294
+TY I R G+ A+ + M + + P+RS N LI S + ++
Sbjct: 46 --AETYDA--LINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREAL 101
Query: 295 E--KVRVRNTRRPCTI---LVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSEL 349
E K N P + +V + + A+ F + + + P T ++ L
Sbjct: 102 EVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCL 161
Query: 350 CRLGQTEEAVKLLRIVEERKLTCVEE--GYAIVMKALCDHCQVEEASNLFGRMLACGLKP 407
+LGQ+ +A+ L + E++ C + + +M ++E +F M+A GLKP
Sbjct: 162 SKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKP 221
Query: 408 KLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLL 467
+ YN+++ G A+ V + + +PD ++YT L++++G+ + A ++
Sbjct: 222 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 281
Query: 468 MEMLGLGWIPELQTYN-LVD 486
+ M P + TYN L+D
Sbjct: 282 LMMRKERRKPNVVTYNALID 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%)
Query: 411 VYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEM 470
+YN +I + +D A G+F M K C PD TY ALI+AHG+ W+ A +L+ +M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 471 LGLGWIPELQTYNLVDN 487
L P TYN + N
Sbjct: 73 LRAAIAPSRSTYNNLIN 89
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 13/200 (6%)
Query: 377 YAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMN 436
Y ++++ H V++A LF M KP Y+++I+ G AM + + M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 437 KKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSD 496
+ P TY LI+A G NW+ A ++ +M G P+L T+N+V + + +
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 497 LCLKLERKLENHQLQK-----------LCKLGQLDAAYEKAKSMLEKGIHL--SAYARDT 543
L ++ +++ L KLGQ A + SM EK +
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 544 FEHVFQKNGKLKIARQLLET 563
H++ G+++ R + E
Sbjct: 194 IMHLYSVKGEIENCRAVFEA 213
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 132/344 (38%), Gaps = 11/344 (3%)
Query: 133 DSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFE 192
+ + M R D + L + K + I GR G+ A++L +
Sbjct: 11 NDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 70
Query: 193 EMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRL 252
+M P +NN++ + E +E+ ++ PD + N ++ +
Sbjct: 71 DMLRA-AIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVT-HNIVLSAYKS 128
Query: 253 GR-LGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVR-VRNTRRPCT--- 307
GR AL F M V P + N++I L L + +++ +R R C
Sbjct: 129 GRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDV 188
Query: 308 ---ILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRI 364
+ ++ G I+ VF A+ GL P+ LM G + A+ +L
Sbjct: 189 VTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGD 248
Query: 365 VEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGN 424
+++ + Y ++ + Q +A +F M KP + YN++I + G
Sbjct: 249 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 308
Query: 425 LDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLM 468
L A+ +F M + P+ ++ L+ A + K KV D ++
Sbjct: 309 LAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK-KVNVDTVL 351
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 165/411 (40%), Gaps = 19/411 (4%)
Query: 86 DHVLDRYKGD-------LSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEY 138
D V R D LS V ++L ++ R+ L WA + G + +
Sbjct: 68 DDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWRS-ALGILKWAESCKGHKHSSDAYDM 126
Query: 139 MADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVF 198
D LG+ K +D MK + + K I RF G G EA+ +F+ + F
Sbjct: 127 AVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGA-GEWEEAVGIFDRLGE-F 184
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAA 258
G + + N +L LCK++ E+ + L++ + +P+ ++ I G+C+ R+ A
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHI-TPNAHTFNIFIHGWCKANRVEEA 243
Query: 259 LEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVR--VRNTRRPCTILVPNMGGN 316
L +M G P + +I C E E + N P +I + +
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 317 SGA---IQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRI-VEERKLTC 372
A + A+ V + SG P + L+ L R G+ EEA ++ R+ + E ++
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI 363
Query: 373 VEEGYAIVMKALCDHCQVEEASNLFGRMLACGL-KPKLGVYNSVISMLCTLGNLDHAMGV 431
Y ++ C H + ++A L M + L P + Y ++ G++ +
Sbjct: 364 NTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKL 423
Query: 432 F-ELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQT 481
E++ K D TYT LI + + AY L EM+ P +T
Sbjct: 424 LKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRT 474
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 128/329 (38%), Gaps = 41/329 (12%)
Query: 187 ALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTI 246
AL + + E+ G K + ++ + +L K + + E R+ D NT+
Sbjct: 104 ALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERM-----RGDKLVTLNTV 158
Query: 247 VGFCR----LGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNT 302
R G A+ IF ++ + G+ ++N+L+ LC K+ VE+ RV
Sbjct: 159 AKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLC----KEKRVEQARV--- 211
Query: 303 RRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLL 362
+L+ S + P+ + C+ + EEA+ +
Sbjct: 212 -----VLLQ-------------------LKSHITPNAHTFNIFIHGWCKANRVEEALWTI 247
Query: 363 RIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTL 422
+ ++ Y +++ C + + + M A G P Y +++S L
Sbjct: 248 QEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQ 307
Query: 423 GNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLL-MEMLGLGWIPELQT 481
+ A+ V M + C PD+L Y LIH + + A + +EM LG T
Sbjct: 308 KEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTST 367
Query: 482 YNLVDNLLREHDRSDLCLKLERKLENHQL 510
YN + + HD D ++L +++E+ L
Sbjct: 368 YNSMIAMYCHHDEEDKAIELLKEMESSNL 396
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 165/411 (40%), Gaps = 19/411 (4%)
Query: 86 DHVLDRYKGD-------LSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEY 138
D V R D LS V ++L ++ R+ L WA + G + +
Sbjct: 68 DDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWRS-ALGILKWAESCKGHKHSSDAYDM 126
Query: 139 MADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVF 198
D LG+ K +D MK + + K I RF G G EA+ +F+ + F
Sbjct: 127 AVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGA-GEWEEAVGIFDRLGE-F 184
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAA 258
G + + N +L LCK++ E+ + L++ + +P+ ++ I G+C+ R+ A
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHI-TPNAHTFNIFIHGWCKANRVEEA 243
Query: 259 LEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVR--VRNTRRPCTILVPNMGGN 316
L +M G P + +I C E E + N P +I + +
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 317 SGA---IQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRI-VEERKLTC 372
A + A+ V + SG P + L+ L R G+ EEA ++ R+ + E ++
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI 363
Query: 373 VEEGYAIVMKALCDHCQVEEASNLFGRMLACGL-KPKLGVYNSVISMLCTLGNLDHAMGV 431
Y ++ C H + ++A L M + L P + Y ++ G++ +
Sbjct: 364 NTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKL 423
Query: 432 F-ELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQT 481
E++ K D TYT LI + + AY L EM+ P +T
Sbjct: 424 LKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRT 474
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 128/329 (38%), Gaps = 41/329 (12%)
Query: 187 ALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTI 246
AL + + E+ G K + ++ + +L K + + E R+ D NT+
Sbjct: 104 ALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERM-----RGDKLVTLNTV 158
Query: 247 VGFCR----LGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNT 302
R G A+ IF ++ + G+ ++N+L+ LC K+ VE+ RV
Sbjct: 159 AKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLC----KEKRVEQARV--- 211
Query: 303 RRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLL 362
+L+ S + P+ + C+ + EEA+ +
Sbjct: 212 -----VLLQ-------------------LKSHITPNAHTFNIFIHGWCKANRVEEALWTI 247
Query: 363 RIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTL 422
+ ++ Y +++ C + + + M A G P Y +++S L
Sbjct: 248 QEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQ 307
Query: 423 GNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLL-MEMLGLGWIPELQT 481
+ A+ V M + C PD+L Y LIH + + A + +EM LG T
Sbjct: 308 KEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTST 367
Query: 482 YNLVDNLLREHDRSDLCLKLERKLENHQL 510
YN + + HD D ++L +++E+ L
Sbjct: 368 YNSMIAMYCHHDEEDKAIELLKEMESSNL 396
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 126/330 (38%), Gaps = 42/330 (12%)
Query: 249 FCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTI 308
F L + A + F QM G LPT + N + L
Sbjct: 178 FAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLG---------------------- 215
Query: 309 LVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEER 368
G + A+ + + + P+ + + +MS CR G+ ++ ++LL+ +E
Sbjct: 216 --------QGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERL 267
Query: 369 KLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHA 428
+ Y ++ C+ + A L M GL+P + +N++I C L A
Sbjct: 268 GFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEA 327
Query: 429 MGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNL 488
VF M P+ +TY LI+ + + + ++A+ +M+ G ++ TYN +
Sbjct: 328 SKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFG 387
Query: 489 LREHDRSDLCLKLERKLENHQL-----------QKLCKLGQLDAAYEKAKSMLEKGIHLS 537
L + ++ + ++L+ L C D +E KSM+ G H +
Sbjct: 388 LCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPN 447
Query: 538 AYARDTFEHVFQKNGKLKIARQLL-ETTRR 566
+ F +N A Q+L E RR
Sbjct: 448 EQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 129/313 (41%), Gaps = 43/313 (13%)
Query: 224 IELALRIFHKME----SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNM 279
+++ALR + +M SP+ Y+ + G+CR G+L +E+ M ++G T + N
Sbjct: 219 VDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNT 278
Query: 280 LIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSG-------------------AI 320
LI C +KG + + + NM G SG +
Sbjct: 279 LIAGHC----EKGLLSSA----------LKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKL 324
Query: 321 QPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEG---Y 377
Q A +VF + + P+T L++ + G E A R E+ ++ Y
Sbjct: 325 QEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMA---FRFYEDMVCNGIQRDILTY 381
Query: 378 AIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNK 437
++ LC + +A+ + L P ++++I C N D +++ M +
Sbjct: 382 NALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIR 441
Query: 438 KRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDL 497
C P+ T+ L+ A + +++ A +L EM+ + +T + V N L+ + L
Sbjct: 442 SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQL 501
Query: 498 CLKLERKLENHQL 510
KL +++E +
Sbjct: 502 VKKLLQEMEGKKF 514
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/422 (18%), Positives = 161/422 (38%), Gaps = 48/422 (11%)
Query: 164 GKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEET 223
G S + +I + L ++ + A S+ ++ G VF+ +LY + S+
Sbjct: 111 GSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRV 170
Query: 224 IELALRIFHKMES-----------------PDTYSCGNTIVGFCRLGRLGAALEIFSQMN 266
+ + F ++ P SC + GR+ AL + +M
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 267 KIGVLPTRSAVNMLIGELCSLSE-KKG-----SVEKVRVRNTRRPCTILVPNMGGNSGAI 320
+ + P +NM++ C + KG +E++ R T L+ G +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH-CEKGLL 289
Query: 321 QPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIV 380
A+++ + SGL P+ L+ CR + +EA K+ ++ + Y +
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 381 MKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRC 440
+ E A + M+ G++ + YN++I LC A + ++K+
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 441 LPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLK 500
+P++ T++ALI KN ++L M+ G P QT+N++
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNML--------------- 454
Query: 501 LERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQL 560
+ C+ D A + + M+ + I L + + + GK ++ ++L
Sbjct: 455 ---------VSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKL 505
Query: 561 LE 562
L+
Sbjct: 506 LQ 507
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 126/330 (38%), Gaps = 42/330 (12%)
Query: 249 FCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTI 308
F L + A + F QM G LPT + N + L
Sbjct: 178 FAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLG---------------------- 215
Query: 309 LVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEER 368
G + A+ + + + P+ + + +MS CR G+ ++ ++LL+ +E
Sbjct: 216 --------QGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERL 267
Query: 369 KLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHA 428
+ Y ++ C+ + A L M GL+P + +N++I C L A
Sbjct: 268 GFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEA 327
Query: 429 MGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNL 488
VF M P+ +TY LI+ + + + ++A+ +M+ G ++ TYN +
Sbjct: 328 SKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFG 387
Query: 489 LREHDRSDLCLKLERKLENHQL-----------QKLCKLGQLDAAYEKAKSMLEKGIHLS 537
L + ++ + ++L+ L C D +E KSM+ G H +
Sbjct: 388 LCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPN 447
Query: 538 AYARDTFEHVFQKNGKLKIARQLL-ETTRR 566
+ F +N A Q+L E RR
Sbjct: 448 EQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 129/313 (41%), Gaps = 43/313 (13%)
Query: 224 IELALRIFHKME----SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNM 279
+++ALR + +M SP+ Y+ + G+CR G+L +E+ M ++G T + N
Sbjct: 219 VDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNT 278
Query: 280 LIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSG-------------------AI 320
LI C +KG + + + NM G SG +
Sbjct: 279 LIAGHC----EKGLLSSA----------LKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKL 324
Query: 321 QPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEG---Y 377
Q A +VF + + P+T L++ + G E A R E+ ++ Y
Sbjct: 325 QEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMA---FRFYEDMVCNGIQRDILTY 381
Query: 378 AIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNK 437
++ LC + +A+ + L P ++++I C N D +++ M +
Sbjct: 382 NALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIR 441
Query: 438 KRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDL 497
C P+ T+ L+ A + +++ A +L EM+ + +T + V N L+ + L
Sbjct: 442 SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQL 501
Query: 498 CLKLERKLENHQL 510
KL +++E +
Sbjct: 502 VKKLLQEMEGKKF 514
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/422 (18%), Positives = 161/422 (38%), Gaps = 48/422 (11%)
Query: 164 GKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEET 223
G S + +I + L ++ + A S+ ++ G VF+ +LY + S+
Sbjct: 111 GSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRV 170
Query: 224 IELALRIFHKMES-----------------PDTYSCGNTIVGFCRLGRLGAALEIFSQMN 266
+ + F ++ P SC + GR+ AL + +M
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 267 KIGVLPTRSAVNMLIGELCSLSE-KKG-----SVEKVRVRNTRRPCTILVPNMGGNSGAI 320
+ + P +NM++ C + KG +E++ R T L+ G +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH-CEKGLL 289
Query: 321 QPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIV 380
A+++ + SGL P+ L+ CR + +EA K+ ++ + Y +
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 381 MKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRC 440
+ E A + M+ G++ + YN++I LC A + ++K+
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 441 LPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLK 500
+P++ T++ALI KN ++L M+ G P QT+N++
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNML--------------- 454
Query: 501 LERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQL 560
+ C+ D A + + M+ + I L + + + GK ++ ++L
Sbjct: 455 ---------VSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKL 505
Query: 561 LE 562
L+
Sbjct: 506 LQ 507
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 162/421 (38%), Gaps = 31/421 (7%)
Query: 92 YKGDLSSNFVLRVL--MSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFL----GR 145
+ +L V+R+L + + L + L FF W+ +G + + M L
Sbjct: 103 FSTELDQYTVIRILDDLFEETLDASIVLYFFRWSELWIGVEHSSRSISRMIHILVSGNMN 162
Query: 146 RKLFDDMKCLLMTVASQKG----------------KVSPKAMSICIRFLGRHGRIHEALS 189
+ D + CL+ + ++ +V SI I R +++ AL
Sbjct: 163 YRAVDMLLCLVKKCSGEERSLCLVMKDLFETRIDRRVLETVFSILIDCCIRERKVNMALK 222
Query: 190 LFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGF 249
L +++ FG P V ++L + + E E + + + I +
Sbjct: 223 LTYKVDQ-FGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKY 281
Query: 250 CRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCS---LSEKKGSVEKVRVRNTRRPC 306
C G E+ M G+ P A + I +LC L E + K+++ +
Sbjct: 282 CSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDS 341
Query: 307 TILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVE 366
+ + G +P E + + L P+ FV +S +C G A + + +
Sbjct: 342 VSVSSVIDGFCKVGKPE-EAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIF 400
Query: 367 ERKL--TCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGN 424
E L CV Y ++ C+ + ++A FG +L G P L +I G+
Sbjct: 401 ELGLLPDCV--CYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGS 458
Query: 425 LDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNL 484
+ A VF M + D +TY L+H +GK ++L+ EM G P++ TYN+
Sbjct: 459 ISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNI 518
Query: 485 V 485
+
Sbjct: 519 L 519
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 123/310 (39%), Gaps = 44/310 (14%)
Query: 182 GRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYS 241
G+ EA+ L F +P+ V+++ L +C + IF PD
Sbjct: 355 GKPEEAIKLIHS----FRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVC 410
Query: 242 CGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIG---ELCSLSEKKGSVEKVR 298
I G+C LGR A + F + K G P+ + +LIG S+S+ + ++
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMK 470
Query: 299 VRNTRRPCTILVPNMGG-----------------NSGAIQPAVEVFWAVFNS-------- 333
+ M G S I P V + + +S
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYID 530
Query: 334 ------------GLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVM 381
G +PST ++ + G +EA L + + ++ + ++
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 382 KALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCL 441
C ++E+A LF ++L GLKP + +YN++I C++G+++ A + LM ++ L
Sbjct: 591 HGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Query: 442 PDNLTYTALI 451
P+ T+ AL+
Sbjct: 651 PNESTHHALV 660
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 147/345 (42%), Gaps = 19/345 (5%)
Query: 149 FDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFN 208
FD LLM + + A ++ I L + G + EA S+ +++ +FG D++ +
Sbjct: 287 FDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK-LFGISQDSVSVS 345
Query: 209 NVLYVLCKKQSSEETIELALRIFHKME-SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNK 267
+V+ CK EE A+++ H P+ + + + C G + A IF ++ +
Sbjct: 346 SVIDGFCKVGKPEE----AIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFE 401
Query: 268 IGVLPTRSAVNMLIGELCSLSEKK------GSVEKVRVRNTRRPCTILVPNMGGNSGAIQ 321
+G+LP +I C+L G++ K + TIL+ G+I
Sbjct: 402 LGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILI-GACSRFGSIS 460
Query: 322 PAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEG---YA 378
A VF + GL LM G+T + K+ +++E + + Y
Sbjct: 461 DAESVFRNMKTEGLKLDVVTYNNLMHGY---GKTHQLNKVFELIDEMRSAGISPDVATYN 517
Query: 379 IVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKK 438
I++ ++ ++EA+ + ++ G P + VI G+ A ++ M
Sbjct: 518 ILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADL 577
Query: 439 RCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN 483
R PD +T +AL+H + K + + A L ++L G P++ YN
Sbjct: 578 RMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYN 622
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 162/421 (38%), Gaps = 31/421 (7%)
Query: 92 YKGDLSSNFVLRVL--MSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFL----GR 145
+ +L V+R+L + + L + L FF W+ +G + + M L
Sbjct: 103 FSTELDQYTVIRILDDLFEETLDASIVLYFFRWSELWIGVEHSSRSISRMIHILVSGNMN 162
Query: 146 RKLFDDMKCLLMTVASQKG----------------KVSPKAMSICIRFLGRHGRIHEALS 189
+ D + CL+ + ++ +V SI I R +++ AL
Sbjct: 163 YRAVDMLLCLVKKCSGEERSLCLVMKDLFETRIDRRVLETVFSILIDCCIRERKVNMALK 222
Query: 190 LFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGF 249
L +++ FG P V ++L + + E E + + + I +
Sbjct: 223 LTYKVDQ-FGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKY 281
Query: 250 CRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCS---LSEKKGSVEKVRVRNTRRPC 306
C G E+ M G+ P A + I +LC L E + K+++ +
Sbjct: 282 CSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDS 341
Query: 307 TILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVE 366
+ + G +P E + + L P+ FV +S +C G A + + +
Sbjct: 342 VSVSSVIDGFCKVGKPE-EAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIF 400
Query: 367 ERKL--TCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGN 424
E L CV Y ++ C+ + ++A FG +L G P L +I G+
Sbjct: 401 ELGLLPDCV--CYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGS 458
Query: 425 LDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNL 484
+ A VF M + D +TY L+H +GK ++L+ EM G P++ TYN+
Sbjct: 459 ISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNI 518
Query: 485 V 485
+
Sbjct: 519 L 519
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 123/310 (39%), Gaps = 44/310 (14%)
Query: 182 GRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYS 241
G+ EA+ L F +P+ V+++ L +C + IF PD
Sbjct: 355 GKPEEAIKLIHS----FRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVC 410
Query: 242 CGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIG---ELCSLSEKKGSVEKVR 298
I G+C LGR A + F + K G P+ + +LIG S+S+ + ++
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMK 470
Query: 299 VRNTRRPCTILVPNMGG-----------------NSGAIQPAVEVFWAVFNS-------- 333
+ M G S I P V + + +S
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYID 530
Query: 334 ------------GLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVM 381
G +PST ++ + G +EA L + + ++ + ++
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 382 KALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCL 441
C ++E+A LF ++L GLKP + +YN++I C++G+++ A + LM ++ L
Sbjct: 591 HGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Query: 442 PDNLTYTALI 451
P+ T+ AL+
Sbjct: 651 PNESTHHALV 660
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 147/345 (42%), Gaps = 19/345 (5%)
Query: 149 FDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFN 208
FD LLM + + A ++ I L + G + EA S+ +++ +FG D++ +
Sbjct: 287 FDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK-LFGISQDSVSVS 345
Query: 209 NVLYVLCKKQSSEETIELALRIFHKME-SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNK 267
+V+ CK EE A+++ H P+ + + + C G + A IF ++ +
Sbjct: 346 SVIDGFCKVGKPEE----AIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFE 401
Query: 268 IGVLPTRSAVNMLIGELCSLSEKK------GSVEKVRVRNTRRPCTILVPNMGGNSGAIQ 321
+G+LP +I C+L G++ K + TIL+ G+I
Sbjct: 402 LGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILI-GACSRFGSIS 460
Query: 322 PAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEG---YA 378
A VF + GL LM G+T + K+ +++E + + Y
Sbjct: 461 DAESVFRNMKTEGLKLDVVTYNNLMHGY---GKTHQLNKVFELIDEMRSAGISPDVATYN 517
Query: 379 IVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKK 438
I++ ++ ++EA+ + ++ G P + VI G+ A ++ M
Sbjct: 518 ILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADL 577
Query: 439 RCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN 483
R PD +T +AL+H + K + + A L ++L G P++ YN
Sbjct: 578 RMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYN 622
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 168/422 (39%), Gaps = 68/422 (16%)
Query: 180 RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDT 239
+ G EA +LF+ ME V G D +++ ++ CK + + L LR+ + D
Sbjct: 249 KRGCAAEAEALFDHME-VDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDP 307
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVE---K 296
I GF +LG L +FSQM K GV +++IG C K+G+V+ +
Sbjct: 308 CIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYC----KEGNVDYALR 363
Query: 297 VRVRNTRRP-------CTILVPNMGGNSGAIQPAVEVFWAVFNSGLLP---STFVVVKLM 346
+ V NT C + G + AV++ + ++G++P + FV++K++
Sbjct: 364 LFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKML 423
Query: 347 SE-------------------------LCRLGQTEEAVK-LLRIVEERKLTCVEEGYAIV 380
+ + LG E V+ LL + + G A+V
Sbjct: 424 PKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVV 483
Query: 381 MKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRC 440
ALC A + +M+ G P YNSVI L ++ + ++ +
Sbjct: 484 TTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDF 543
Query: 441 LPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLK 500
+PD TY +++ K + A+ ++ M LG P + Y+ +
Sbjct: 544 VPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSI--------------- 588
Query: 501 LERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQL 560
+ L K G++ A E MLE GI A + + +NG++ A +L
Sbjct: 589 ---------IGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANEL 639
Query: 561 LE 562
+E
Sbjct: 640 VE 641
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 174/435 (40%), Gaps = 52/435 (11%)
Query: 155 LLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVL 214
LL +A + ++ +++ L ALS E+M + GC P +N+V+ L
Sbjct: 464 LLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNL-GCTPLPFSYNSVIKCL 522
Query: 215 CKKQSSEETIELALRIFHKME-SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPT 273
++ E+ L + I +++ PD + + C+ AA I M ++G+ PT
Sbjct: 523 FQENIIEDLASL-VNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPT 581
Query: 274 RSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNS 333
+ + +IG L G G + A E F + S
Sbjct: 582 VAIYSSIIGSL------------------------------GKQGRVVEAEETFAKMLES 611
Query: 334 GLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEA 393
G+ P + +++ R G+ +EA +L+ V + L Y +++ +E+
Sbjct: 612 GIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKG 671
Query: 394 SNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALI-- 451
+ML GL P + +Y ++I G+ + +F LM + D++ Y L+
Sbjct: 672 CQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSG 731
Query: 452 --HAHGKVKNWKVAYDLLMEMLGLGWI---PELQTYNLVDNLLREHDRSDLCLKLERK-- 504
A + K +V + E L I P + + + N + ++ K+++
Sbjct: 732 LWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSII 791
Query: 505 ----LENHQLQKLCKLGQLDAAYEKAKSMLEKGI--HLSAYARDTFEHVFQKNGKLKIAR 558
L N + C G+LD AY +SM ++GI +L Y H+ + G ++ A
Sbjct: 792 PNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHI--EAGDIESAI 849
Query: 559 QLLETTRRVQEPEET 573
L E T EP++
Sbjct: 850 DLFEGTN--CEPDQV 862
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 13/291 (4%)
Query: 170 AMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALR 229
A I I R+GRI EA L EE+ F +P + + ++ K E+ + +
Sbjct: 619 AYMIMINTYARNGRIDEANELVEEVVKHF-LRPSSFTYTVLISGFVKMGMMEKGCQYLDK 677
Query: 230 IFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSA-VNMLIGELCSLS 288
+ SP+ I F + G + +F M + + A + +L G +++
Sbjct: 678 MLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMA 737
Query: 289 EKKG-------SVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFV 341
KK EK+ R R + +P+ GN G+ A+EV V S ++P+ ++
Sbjct: 738 RKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKS-IIPNLYL 796
Query: 342 VVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRML 401
+++ C G+ +EA L +++ + Y I+MK+ + +E A +LF
Sbjct: 797 HNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE--- 853
Query: 402 ACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIH 452
+P +Y++++ LC A+ + M K P+ +Y L+
Sbjct: 854 GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQ 904
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 171/421 (40%), Gaps = 44/421 (10%)
Query: 186 EALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNT 245
EAL F+E + D + +N L K EE EL + + PD +
Sbjct: 371 EALEKFKEFRDM-NIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTL 429
Query: 246 IVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRP 305
I G+C G++ AL++ +M G+ P N+L+ L + G E+V R
Sbjct: 430 IDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLA----RNGHEEEVLEIYERMK 485
Query: 306 CTILVPNMGGNSGAIQ--------PAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEE 357
PN NS I+ E F++ + VK C G +++
Sbjct: 486 AEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVK---GYCEAGLSKK 542
Query: 358 AVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVIS 417
A K +E V Y + +LC +E+A ++ +M A ++P + +I
Sbjct: 543 AYKAFVRLEYPLRKSV---YIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIG 599
Query: 418 MLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIP 477
C L N+ A +F+ M ++ +PD TYT +IH + ++ + A L +M G P
Sbjct: 600 AFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKP 659
Query: 478 ELQTYN-LVDNLLR----EHDRSDLCLKLERKLENHQLQKL------------------- 513
++ TY L+D L+ H+ + ++ ++ + L++
Sbjct: 660 DVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQ 719
Query: 514 CKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLL-ETTRRVQEPEE 572
CK+ L+ A E M++ G+ A T + + G + +A L+ E +++ P E
Sbjct: 720 CKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSE 779
Query: 573 T 573
+
Sbjct: 780 S 780
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 140/365 (38%), Gaps = 88/365 (24%)
Query: 181 HGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTY 240
G++ +AL L +EM G PD + +N ++ L + EE +E+ R+ K E P
Sbjct: 436 QGKVVDALDLIDEM-IGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERM--KAEGPKPN 492
Query: 241 SCGNTIV--GFCRLGRLGAALEIFSQM------NKIGVL--------------------- 271
+ N+++ G C ++ A + FS + NK +
Sbjct: 493 AVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEY 552
Query: 272 PTRSAVNM-LIGELC--SLSEKKGSVEK----VRVRNTRRPCTILVPNMGGNSGAIQPAV 324
P R +V + L LC EK V K RV R C ++ + ++ A
Sbjct: 553 PLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNN-VREAQ 611
Query: 325 EVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKL-------------- 370
+F + GL+P F ++ CRL + ++A L +++R +
Sbjct: 612 VLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRY 671
Query: 371 ---------TCVEEG-------------------------YAIVMKALCDHCQVEEASNL 396
TC +G Y +++ C +E+A+ L
Sbjct: 672 LKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAEL 731
Query: 397 FGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGK 456
F RM+ GL+P + Y ++IS G +D A+ + ++KK +P A+ A K
Sbjct: 732 FDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAALK 791
Query: 457 VKNWK 461
K ++
Sbjct: 792 AKRFQ 796
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 146/383 (38%), Gaps = 48/383 (12%)
Query: 172 SICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIF 231
+I ++ L R G + EA L E E+VFG + + LC +E+ + L L +
Sbjct: 220 AIVVKALCRKGNLEEAAMLLIENESVFG-------YKTFINGLCVTGETEKAVALILELI 272
Query: 232 HK--MESPDTYSC-GNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLS 288
+ + D + G + GFC ++ AA + +M +IG A +I C
Sbjct: 273 DRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYC--- 329
Query: 289 EKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSE 348
+N P A+ + GL + +V ++
Sbjct: 330 -----------KNMNLP----------------EALGFLDKMLGKGLKVNCVIVSLILQC 362
Query: 349 LCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPK 408
C++ EA++ + + + Y + AL +VEEA L M G+ P
Sbjct: 363 YCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPD 422
Query: 409 LGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLM 468
+ Y ++I C G + A+ + + M PD +TY L+ + + + ++
Sbjct: 423 VINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYE 482
Query: 469 EMLGLGWIPELQTYNLVDNLL----REHDRSDLCLKLERKLENHQ---LQKLCKLGQLDA 521
M G P T +++ L + + D LE+K ++ ++ C+ G
Sbjct: 483 RMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKK 542
Query: 522 AYEKAKSMLEKGIHLSAYARDTF 544
AY KA LE + S Y + F
Sbjct: 543 AY-KAFVRLEYPLRKSVYIKLFF 564
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/467 (21%), Positives = 185/467 (39%), Gaps = 61/467 (13%)
Query: 115 KTLNFFSWAGTQMGFQFDDSVVEYMADFLGR-RKLFDDMKCLLMTVASQKGKVSPKAMSI 173
KTLNFF W Q + DD ++M + + + + + ++ + ++ P+ +
Sbjct: 54 KTLNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRIIERLKISGCEIKPRVFLL 113
Query: 174 CIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHK 233
+ R +A+ ++ M + FG P+ N ++ V K + AL IF
Sbjct: 114 LLEIFWRGHIYDKAIEVYTGMSS-FGFVPNTRAMNMMMDVNFKLN----VVNGALEIFEG 168
Query: 234 MESPDTYSCGNTIVGFCRLGRLGAALEI---FSQMNKIGVLPTRSAVNMLIGELCSLSEK 290
+ + +S + FC G G + + +M G P R E+
Sbjct: 169 IRFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNR--------------ER 214
Query: 291 KGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELC 350
G + ++ R +G + A +V + SG+ S V L+S
Sbjct: 215 FGQILRLCCR----------------TGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFF 258
Query: 351 RLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLG 410
R G+ ++AV L + + + Y ++K D V+EA + ++ + GL P +
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIV 318
Query: 411 VYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHA---HGKVKNWKVAYDLL 467
+ N +I LG + A VF + K++ +PD T+ +++ + GK +DL+
Sbjct: 319 LCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGK-------FDLV 371
Query: 468 MEML-GLGWIPELQTYNLVDNLLREHDRSDLCLK-----------LERKLENHQLQKLCK 515
+ G+G +L T NL+ N + + LK L+ L LC+
Sbjct: 372 PRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCR 431
Query: 516 LGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLE 562
G AA + K ++++ HL A+ + GK A L +
Sbjct: 432 GGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFK 478
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 153/380 (40%), Gaps = 52/380 (13%)
Query: 166 VSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIE 225
VS S+ + R G +A+ LF +M + GC P+ + + +++ +E
Sbjct: 245 VSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQI-GCSPNLVTYTSLIKGFVDLGMVDEAFT 303
Query: 226 LALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC 285
+ ++ + +PD C I + RLGR A ++F+ + K ++P + ++ LC
Sbjct: 304 VLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLC 363
Query: 286 SLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKL 345
LS K LVP I + + + LL + F
Sbjct: 364 -LSGKFD----------------LVPR-------ITHGIGTDFDLVTGNLLSNCF----- 394
Query: 346 MSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGL 405
++G A+K+L I+ + Y + + ALC A ++ ++
Sbjct: 395 ----SKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKK 450
Query: 406 KPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCL----P-DNLTYTALIHAHGKVKNW 460
++++I L LG + A+ +F KRC+ P D ++YT I + K
Sbjct: 451 HLDAHFHSAIIDSLIELGKYNTAVHLF-----KRCILEKYPLDVVSYTVAIKGLVRAKRI 505
Query: 461 KVAYDLLMEMLGLGWIPELQTY-NLVDNLLREHDRSDL------CLKLERKLE-NHQLQK 512
+ AY L +M G P +TY ++ L +E + + C++ +L+ N + Q
Sbjct: 506 EEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQV 565
Query: 513 LCKLGQLDAAYEKAKSMLEK 532
L + + + +S+ EK
Sbjct: 566 YSLLSRYRGDFSEFRSVFEK 585
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 146/329 (44%), Gaps = 22/329 (6%)
Query: 183 RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSC 242
R+ AL FE+M+T G PD+ FN ++ C+ + +E +L + + P S
Sbjct: 270 RLETALRFFEDMKTR-GISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSY 328
Query: 243 GNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCS---LSEKKGSVEKVRV 299
I G+ + R+ L IF +M G+ P + + L+ LC + E K ++ +
Sbjct: 329 TTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMA 388
Query: 300 RN-TRRPCTILVPNMGGNS--GAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTE 356
++ + +I + + S G + A EV A+ + L+ C+
Sbjct: 389 KHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYN 448
Query: 357 EAVKLLRIVEERKLTCVEE--------GYAIVMKALCDHCQVEEASNLFGRMLACGLKPK 408
A+KLL + E+++ + Y +++ LC++ Q +A LF +++ G++ +
Sbjct: 449 RAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQ 508
Query: 409 LGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAH---GKVKNWKVAYD 465
N++I GN D + + ++M+++ ++ Y LI ++ G+ + K A D
Sbjct: 509 -DALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALD 567
Query: 466 LLMEMLGLGWIPELQTYNLVDNLLREHDR 494
++E G +P+ + V L E R
Sbjct: 568 SMVED---GHVPDSSLFRSVIESLFEDGR 593
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 106/487 (21%), Positives = 186/487 (38%), Gaps = 71/487 (14%)
Query: 99 NFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMT 158
+ V VL + L A L FF W + D M LG + +C+L+
Sbjct: 118 SLVYNVLHGAKKLEHA--LQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLD 175
Query: 159 VASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQ 218
+ + + I G+ G + E++ +F++M+ + G + +N++ V+ ++
Sbjct: 176 MPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDL-GVERTIKSYNSLFKVILRRG 234
Query: 219 SSEETIELALRIFHKMES----PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTR 274
+A R F+KM S P ++ + GF RL AL F M G+ P
Sbjct: 235 R----YMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDD 290
Query: 275 SAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSG 334
+ N +I C +K EK+ V M GN I P+V V + G
Sbjct: 291 ATFNTMINGFCRF-KKMDEAEKLFVE------------MKGNK--IGPSV-VSYTTMIKG 334
Query: 335 LLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEG---YAIVMKALCDHCQVE 391
L + LRI EE + + +E Y+ ++ LCD ++
Sbjct: 335 YLA-----------------VDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMV 377
Query: 392 EASNLFGRMLACGLKPKLG-VYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTAL 450
EA N+ M+A + PK ++ ++ G++ A V + M + Y L
Sbjct: 378 EAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVL 437
Query: 451 IHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQL 510
I K + A LL ++ I LR D L++E N +
Sbjct: 438 IENQCKASAYNRAIKLLDTLIEKEII------------LRHQD----TLEMEPSAYNPII 481
Query: 511 QKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQ---KNGKLKIARQLLETTRRV 567
+ LC GQ A + ++++G+ +D ++ + K G + ++L+ R
Sbjct: 482 EYLCNNGQTAKAEVLFRQLMKRGVQ----DQDALNNLIRGHAKEGNPDSSYEILKIMSRR 537
Query: 568 QEPEETN 574
P E+N
Sbjct: 538 GVPRESN 544
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 132/334 (39%), Gaps = 56/334 (16%)
Query: 111 LGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQ---KGKVS 167
+G K L FF W T GF ++ MA L + F + L V+ + K V+
Sbjct: 105 IGLQKALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVT 164
Query: 168 PKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCK----KQSSEET 223
+++ ++ LG G + EAL+ F M+ + CKPD +N ++ LC+ K++
Sbjct: 165 TASITCLMKCLGEEGFVKEALATFYRMKE-YHCKPDVYAYNTIINALCRVGNFKKARFLL 223
Query: 224 IELALRIFHKMESPDTYSCGNTIVGFCRLG-----------RLGAALEIFSQMNKIGVLP 272
++ L F PDTY+ I +CR G R+ A +F +M G +P
Sbjct: 224 DQMQLPGFRY--PPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVP 281
Query: 273 TRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFN 332
N LI C + I A+E+F +
Sbjct: 282 DVVTYNCLIDGCC------------------------------KTNRIGRALELFEDMKT 311
Query: 333 SGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEG---YAIVMKALCDHCQ 389
G +P+ + + E A++++R + +KL G Y ++ AL + +
Sbjct: 312 KGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTM--KKLGHGVPGSSTYTPLIHALVETRR 369
Query: 390 VEEASNLFGRMLACGLKPKLGVYNSVISMLCTLG 423
EA +L M+ GL P+ Y V L + G
Sbjct: 370 AAEARDLVVEMVEAGLVPREYTYKLVCDALSSEG 403
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 111/271 (40%), Gaps = 51/271 (18%)
Query: 315 GNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVE 374
G G ++ A+ F+ + P + +++ LCR+G ++A LL ++
Sbjct: 176 GEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPP 235
Query: 375 EGYA--IVMKALCDH-----CQ------VEEASNLFGRMLACGLKPKLGVYNSVISMLCT 421
+ Y I++ + C + C+ + EA+ +F ML G P + YN +I C
Sbjct: 236 DTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCK 295
Query: 422 LGNLDHAMGVFELMNKKRCLPDNL------------------------------------ 445
+ A+ +FE M K C+P+ +
Sbjct: 296 TNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSS 355
Query: 446 TYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLV-DNLLREHDRSDLCLKLERK 504
TYT LIHA + + A DL++EM+ G +P TY LV D L E S L +L ++
Sbjct: 356 TYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKR 415
Query: 505 LENHQLQKLCKLGQLDAAYEKAKSMLEKGIH 535
+ Q+ ++ ++ + K ++ K H
Sbjct: 416 MREGIQQRYSRVMKIKPTMAR-KEVVRKYFH 445
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 39/202 (19%)
Query: 380 VMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKK- 438
+MK L + V+EA F RM KP + YN++I+ LC +GN A + + M
Sbjct: 171 LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPG 230
Query: 439 -RCLPDNLTYTALIHAHGKV------------KNWKVAYDLLMEMLGLGWIPELQTYNLV 485
R PD TYT LI ++ + + W+ A + EML G++P++ TYN
Sbjct: 231 FRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWE-ANRMFREMLFRGFVPDVVTYN-- 287
Query: 486 DNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFE 545
CL + CK ++ A E + M KG + ++F
Sbjct: 288 ------------CL----------IDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFI 325
Query: 546 HVFQKNGKLKIARQLLETTRRV 567
+ +++ A +++ T +++
Sbjct: 326 RYYSVTNEIEGAIEMMRTMKKL 347
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 173/419 (41%), Gaps = 17/419 (4%)
Query: 88 VLDRYKGD----LSSNFVLRVLMSYQHLGRAKTLN-FFSWAGTQMGFQFDDSVVEYMADF 142
VL +YK D L + VL L+ ++ L + ++ W Q + F + +
Sbjct: 96 VLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITA 155
Query: 143 LGRRKLFDDMKCLLMTVASQKGKVSPKAMSIC--IRFLGRHGRIHEALSLFEEMETVFGC 200
G+ F+ + +L +V S+ G +P +S + GR G+ + A ++F M++ G
Sbjct: 156 YGKLGNFNGAERVL-SVLSKMGS-TPNVISYTALMESYGRGGKCNNAEAIFRRMQSS-GP 212
Query: 201 KPDNLVFNNVLYVLC---KKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGA 257
+P + + +L K + +EE E L PD I + + G
Sbjct: 213 EPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEK 272
Query: 258 ALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTI---LVPNMG 314
A ++FS M GV + N L+ S E ++++ R+ +P + L+
Sbjct: 273 ARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQ-RSDIQPDVVSYALLIKAY 331
Query: 315 GNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVE 374
G + + A+ VF + ++G+ P+ L+ G E+A + + + ++
Sbjct: 332 GRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDL 391
Query: 375 EGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFEL 434
Y ++ A + +E A F R+ G +P + Y ++I +++ M V+E
Sbjct: 392 WSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEK 451
Query: 435 MNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHD 493
M + T ++ A G+ KN+ A EM G P+ + N++ +L D
Sbjct: 452 MRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQD 510
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 181/412 (43%), Gaps = 33/412 (8%)
Query: 147 KLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLV 206
KL D++K L+ TV + A +I IR L + G ++ +++ + GC+ +
Sbjct: 307 KLLDEIK-LVGTVNMDR------AYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFR 359
Query: 207 FNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMN 266
+N++++ L K+ + + ++ + + SP+ + + FC+ G + ALE++ +
Sbjct: 360 YNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRS 419
Query: 267 KIGVLPTRSAVNMLIGELC-------SLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGA 319
+IG PT + N LI LC + KG++++ + T+ N G
Sbjct: 420 EIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTL--TNALCWKGK 477
Query: 320 IQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAI 379
A E+ A LLP K++S LC +G+ E+A+ + + + + + +
Sbjct: 478 PDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTS 537
Query: 380 VMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTL----GNLDHAMGVFEL- 434
++ + + A+ L RM G P +Y +VI +C + N + F+L
Sbjct: 538 LIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLS 597
Query: 435 MNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGL-----GWIPELQTY----NLV 485
+ + + NL A GK K ++ YD +M+ G+ I LQ+Y +
Sbjct: 598 LWEHKVQAYNLFIEGAGFA-GKPKLARLVYD-MMDRDGITPTVASNILMLQSYLKNEKIA 655
Query: 486 DNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLS 537
D L HD + K +++L + LCK +LD A + M +G+ S
Sbjct: 656 DALHFFHDLREQG-KTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPS 706
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 12/229 (5%)
Query: 345 LMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACG 404
L+ + C+ G+ +EA LR + G I++ ALC + +EA+ L + G
Sbjct: 257 LVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVG 316
Query: 405 LKPKLGVYNSVISMLCTLGNLDHAMGVFELMNK-KRCLPDNLTYTALIHAHGKVKNWKVA 463
YN I L G L++ + ++ + C + Y +++ K N
Sbjct: 317 TVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGV 376
Query: 464 YDLLMEMLGLGWIPELQTYN----------LVDNLLREH-DRSDLCLKLERKLENHQLQK 512
YD+L EM+ G P +T N VD L + RS++ N+ +
Sbjct: 377 YDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHT 436
Query: 513 LCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLL 561
LC ++ AY+ K +++G L T + GK +AR+L+
Sbjct: 437 LCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELV 485
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 173/419 (41%), Gaps = 17/419 (4%)
Query: 88 VLDRYKGD----LSSNFVLRVLMSYQHLGRAKTLN-FFSWAGTQMGFQFDDSVVEYMADF 142
VL +YK D L + VL L+ ++ L + ++ W Q + F + +
Sbjct: 89 VLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITA 148
Query: 143 LGRRKLFDDMKCLLMTVASQKGKVSPKAMSIC--IRFLGRHGRIHEALSLFEEMETVFGC 200
G+ F+ + +L +V S+ G +P +S + GR G+ + A ++F M++ G
Sbjct: 149 YGKLGNFNGAERVL-SVLSKMGS-TPNVISYTALMESYGRGGKCNNAEAIFRRMQSS-GP 205
Query: 201 KPDNLVFNNVLYVLC---KKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGA 257
+P + + +L K + +EE E L PD I + + G
Sbjct: 206 EPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEK 265
Query: 258 ALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTI---LVPNMG 314
A ++FS M GV + N L+ S E ++++ R+ +P + L+
Sbjct: 266 ARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQ-RSDIQPDVVSYALLIKAY 324
Query: 315 GNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVE 374
G + + A+ VF + ++G+ P+ L+ G E+A + + + ++
Sbjct: 325 GRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDL 384
Query: 375 EGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFEL 434
Y ++ A + +E A F R+ G +P + Y ++I +++ M V+E
Sbjct: 385 WSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEK 444
Query: 435 MNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHD 493
M + T ++ A G+ KN+ A EM G P+ + N++ +L D
Sbjct: 445 MRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQD 503
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 161/402 (40%), Gaps = 44/402 (10%)
Query: 180 RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKME---- 235
+ ++ EALS+F M G P+ + FN ++ CK + AL++ KM
Sbjct: 230 KESKLFEALSVFYRMLKC-GVWPNVVSFNMMIDGACKTGD----MRFALQLLGKMGMMSG 284
Query: 236 ---SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKG 292
SP+ + + I GFC+ GRL A I M K GV L+ +
Sbjct: 285 NFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVD---AYGRAGS 341
Query: 293 SVEKVRVRNTRRPCTILVPNMGGNS--------GAIQPAVEVFWAVFNSGLLPSTFVVVK 344
S E +R+ + ++V + NS G I+ A+ V + + + F
Sbjct: 342 SDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAI 401
Query: 345 LMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACG 404
++ LCR G +EAV+ R + E+KL + +M ++ A + G ML G
Sbjct: 402 VVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQG 461
Query: 405 LKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGK-------- 456
L + ++I G L+ A+ +++ M K + + Y ++++ K
Sbjct: 462 LSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAE 521
Query: 457 -------VKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQ 509
+K+ LL E L G + E D++L + + D + N
Sbjct: 522 AVVNAMEIKDIVTYNTLLNESLKTGNVEE------ADDILSKMQKQDGEKSVSLVTFNIM 575
Query: 510 LQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKN 551
+ LCK G + A E K M+E+G+ + T F K+
Sbjct: 576 INHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKH 617
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 105/505 (20%), Positives = 194/505 (38%), Gaps = 89/505 (17%)
Query: 87 HVLDRYKGDLSSNFVLRVLMSYQHLGRAKTLNFFSWA-----GTQMGFQFDDSVVEYMAD 141
+ L ++ L++ + RVL ++ + L F++W + +F+ S V M
Sbjct: 46 NTLHQFSSSLTNPLISRVLREFRSSPKL-ALEFYNWVLRSNTVAKSENRFEASCV--MIH 102
Query: 142 FLGRRKLFDDMKCLLMTVASQKGK-------------------VSPKAMSICIRFLGRHG 182
L + FDD ++ + S +G+ SP +R ++G
Sbjct: 103 LLVGSRRFDDALSIMANLMSVEGEKLSPLHVLSGLIRSYQACGSSPDVFDSLVRACTQNG 162
Query: 183 RIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSC 242
A + E+ C + + N ++ C +E I+ +++ +M+S
Sbjct: 163 DAQGAYEVIEQTRAEGFCVSVHALNN---FMGCLLNVNE--IDRFWKVYKEMDSLGYVEN 217
Query: 243 GNT----IVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVR 298
NT I FC+ +L AL +F +M K GV P + NM+I C + + +++
Sbjct: 218 VNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQ--- 274
Query: 299 VRNTRRPCTILVPNMGGNSGA-IQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEE 357
L+ MG SG + P + +V N C+ G+ +
Sbjct: 275 ----------LLGKMGMMSGNFVSPNAVTYNSVING---------------FCKAGRLDL 309
Query: 358 AVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVIS 417
A ++ + + + C E Y ++ A +EA L M + GL +YNS++
Sbjct: 310 AERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVY 369
Query: 418 MLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIP 477
L G+++ AM V MN K D +T I G +N G++
Sbjct: 370 WLFMEGDIEGAMSVLRDMNSKNMQIDR--FTQAIVVRGLCRN--------------GYVK 413
Query: 478 ELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLS 537
E + + S+ L + N + + +L A + SML +G+ L
Sbjct: 414 EAVEF--------QRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLD 465
Query: 538 AYARDTFEHVFQKNGKLKIARQLLE 562
A + T + K GKL+ A ++ +
Sbjct: 466 AISFGTLIDGYLKEGKLERALEIYD 490
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 136/337 (40%), Gaps = 41/337 (12%)
Query: 165 KVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETI 224
+++P ++ +G+ AL +FE + P+ + +L VL +
Sbjct: 153 QMTPTDYCFVVKSVGQES-WQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQES--- 208
Query: 225 ELALRIFHKMESP--DTYSCGNTIVG-FCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLI 281
LA+ IF + E D N ++G + R G+ A E+ M + G +P + N LI
Sbjct: 209 -LAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLI 267
Query: 282 GELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFV 341
N R L PN+ AVE+ V NSGL P
Sbjct: 268 -------------------NARLKSGGLTPNL---------AVELLDMVRNSGLRPDAIT 299
Query: 342 VVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAI-VMKALCDHCQVE-EASNLFGR 399
L+S R + AVK+ +E + C + + M ++ C + EA LF
Sbjct: 300 YNTLLSACSRDSNLDGAVKVFEDMEAHR--CQPDLWTYNAMISVYGRCGLAAEAERLFME 357
Query: 400 MLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKN 459
+ G P YNS++ N + V++ M K D +TY +IH +GK
Sbjct: 358 LELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQ 417
Query: 460 WKVAYDLLMEMLGL-GWIPELQTYNLVDNLLREHDRS 495
+A L +M GL G P+ TY ++ + L + +R+
Sbjct: 418 LDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRT 454
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 138/342 (40%), Gaps = 53/342 (15%)
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES----PDTYSCGNTIVGFCRLGR 254
G +PD + +N +L C + S+ ++ A+++F ME+ PD ++ I + R G
Sbjct: 292 GLRPDAITYNTLLSA-CSRDSN---LDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 255 LGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMG 314
A +F ++ G P N L+ R RNT +
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFA------------RERNTEK---------- 385
Query: 315 GNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKL---LRIVEERKLT 371
EV+ + G ++ + GQ + A++L ++ + R
Sbjct: 386 --------VKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPD 437
Query: 372 CVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGV 431
+ Y +++ +L + EA+ L ML G+KP L Y+++I G + A
Sbjct: 438 AIT--YTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDT 495
Query: 432 FELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLRE 491
F M + PDNL Y+ ++ + + A+ L +M+ G P Y L+ L +
Sbjct: 496 FSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMK 555
Query: 492 HDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKG 533
+RSD K R +E +LC + L+ + S+L KG
Sbjct: 556 ENRSDDIQKTIRDME-----ELCGMNPLEIS-----SVLVKG 587
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 127/314 (40%), Gaps = 33/314 (10%)
Query: 169 KAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELAL 228
K+M + LG H+ ++ E F C P ++ +++ K++ ++ +
Sbjct: 720 KSMVVVYCKLGFPETAHQVVNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVG 776
Query: 229 RIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLS 288
+ +PD + + + + + G A IF+ M + G PT ++N+L+ LC
Sbjct: 777 NLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCV-- 834
Query: 289 EKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSE 348
G +E++ V V + + G S ++ ++
Sbjct: 835 --DGRLEELYV--------------------------VVEELQDMGFKISKSSILLMLDA 866
Query: 349 LCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPK 408
R G E K+ ++ Y ++++ LC +V +A + M K +
Sbjct: 867 FARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVE 926
Query: 409 LGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLM 468
L ++NS++ M + + + V++ + + PD TY LI + + + + Y L+
Sbjct: 927 LAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQ 986
Query: 469 EMLGLGWIPELQTY 482
+M LG P+L TY
Sbjct: 987 QMRNLGLDPKLDTY 1000
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 24/157 (15%)
Query: 404 GLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVA 463
GL+P YN+++S NLD A+ VFE M RC PD TY A+I +G+ A
Sbjct: 292 GLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEA 351
Query: 464 YDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAY 523
L ME+ G+ P+ TYN +LL R ER E ++ Y
Sbjct: 352 ERLFMELELKGFFPDAVTYN---SLLYAFAR-------ERNTE-----------KVKEVY 390
Query: 524 EKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQL 560
++ + M G +T H++ K G+L +A QL
Sbjct: 391 QQMQKM---GFGKDEMTYNTIIHMYGKQGQLDLALQL 424
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 146/345 (42%), Gaps = 12/345 (3%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
I G+ GR+++A +LF EM G D + FN +++ E L ++ K
Sbjct: 312 IDLYGKAGRLNDAANLFSEMLKS-GVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKG 370
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCS---LSEKK 291
SPDT + + G + AALE + ++ K+G+ P ++ LC ++E +
Sbjct: 371 ISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVE 430
Query: 292 GSVEKVRVRNTRRPCTILVP---NMGGNSGAIQPAVEVFWAVFNSGLLPSTFV--VVKLM 346
+ ++ RN+ R VP M N G + A +F +L ST + V+ +
Sbjct: 431 AVIAEMD-RNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVY 489
Query: 347 SELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLK 406
+E + E R + ++ +E Y +++KA E+A +LF M G
Sbjct: 490 AEKGLWVEAETVFYGKRNMSGQRNDVLE--YNVMIKAYGKAKLHEKALSLFKGMKNQGTW 547
Query: 407 PKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDL 466
P YNS+ ML + +D A + M C P TY A+I ++ ++ A DL
Sbjct: 548 PDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDL 607
Query: 467 LMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQ 511
M G P Y + N E + ++ R +E H +Q
Sbjct: 608 YEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQ 652
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 147/370 (39%), Gaps = 16/370 (4%)
Query: 115 KTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSIC 174
K+L+F S + + S + D G+ +D L + + +
Sbjct: 287 KSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTM 346
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
I G HG + EA SL ++ME G PD +N +L + IE AL + K+
Sbjct: 347 IHTCGTHGHLSEAESLLKKMEEK-GISPDTKTYN----ILLSLHADAGDIEAALEYYRKI 401
Query: 235 ES----PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCS---L 287
PDT + + C+ + + ++M++ + +V +++ + +
Sbjct: 402 RKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLV 461
Query: 288 SEKKGSVEKVRVRNTRRPCTI-LVPNMGGNSGAIQPAVEVFWAVFN-SGLLPSTFVVVKL 345
+ K E+ ++ T+ V ++ G A VF+ N SG +
Sbjct: 462 VQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVM 521
Query: 346 MSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGL 405
+ + E+A+ L + ++ + E Y + + L V+EA + ML G
Sbjct: 522 IKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGC 581
Query: 406 KPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIH--AHGKVKNWKVA 463
KP Y ++I+ LG L A+ ++E M K P+ + Y +LI+ A + +
Sbjct: 582 KPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQ 641
Query: 464 YDLLMEMLGL 473
Y +ME G+
Sbjct: 642 YFRMMEEHGV 651
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 165/411 (40%), Gaps = 49/411 (11%)
Query: 156 LMTVASQKGKVSP--KAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYV 213
L+ +KG +SP K +I + G I AL + ++ V G PD + VL++
Sbjct: 362 LLKKMEEKG-ISPDTKTYNILLSLHADAGDIEAALEYYRKIRKV-GLFPDTVTHRAVLHI 419
Query: 214 LCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPT 273
LC+++ E + + D +S + + G + A +F + VL +
Sbjct: 420 LCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSS 479
Query: 274 RSAVNMLIGELCSLSEKKGSVEKVRV----------RNTRRPCTILVPNMGGNSGAIQPA 323
+ L + +EK VE V RN +++ G + + A
Sbjct: 480 TT----LAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYG-KAKLHEKA 534
Query: 324 VEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKA 383
+ +F + N G P L L + +EA ++L + + + YA ++ +
Sbjct: 535 LSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIAS 594
Query: 384 LCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPD 443
+ +A +L+ M G+KP VY S+I+ G ++ A+ F +M + +
Sbjct: 595 YVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSN 654
Query: 444 NLTYTALIHAHGKV---KNWKVAYDLLMEMLG----------------LGWIPELQTYNL 484
++ T+LI A+ KV + + YD + + G LG + E ++
Sbjct: 655 HIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAES--- 711
Query: 485 VDNLLREHDRSDLCLKLERKLENHQLQKLCK-LGQLDAAYEKAKSMLEKGI 534
+ N LRE D+ + + L K +G LD A E A+ M E G+
Sbjct: 712 IFNALREKGTCDV-------ISFATMMYLYKGMGMLDEAIEVAEEMRESGL 755
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/363 (18%), Positives = 147/363 (40%), Gaps = 12/363 (3%)
Query: 131 FDDSVVE-YMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALS 189
F D+V + L +RK+ +++ ++ + ++ ++ + ++ G + +A +
Sbjct: 407 FPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKA 466
Query: 190 LFEEMETVFGCKPDNLVFNNVLYVLCKK--QSSEETIELALRIFHKMESPDTYSCGNTIV 247
LFE + C + V+ V +K ET+ R + D I
Sbjct: 467 LFERFQ--LDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRN-DVLEYNVMIK 523
Query: 248 GFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLS---EKKGSVEKVRVRNTRR 304
+ + AL +F M G P N L L + E + + ++ +
Sbjct: 524 AYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKP 583
Query: 305 PCTILVPNMGGNS--GAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLL 362
C + G + AV+++ A+ +G+ P+ V L++ G EEA++
Sbjct: 584 GCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYF 643
Query: 363 RIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTL 422
R++EE + ++KA +EEA ++ +M P + NS++S+ L
Sbjct: 644 RMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADL 703
Query: 423 GNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTY 482
G + A +F + +K D +++ +++ + + A ++ EM G + + ++
Sbjct: 704 GIVSEAESIFNALREKGTC-DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSF 762
Query: 483 NLV 485
N V
Sbjct: 763 NQV 765
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 165/381 (43%), Gaps = 22/381 (5%)
Query: 176 RFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKME 235
RF+G I EA ++ M G +PD +N+++ K ++L + H
Sbjct: 60 RFIG----IDEAYAVTRRMREA-GIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGL 114
Query: 236 SPDTYSCGNTIVGFCRLGRLGAALEIFSQ-MNKIGVLPTRSAVNMLIGELCSLSEKKGSV 294
SPD +S + + +LGR G A +I + ++ G++P N+L+ LC ++
Sbjct: 115 SPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAI 174
Query: 295 EKVRVRNTRRPCTILVPNMGGNSGAIQPAV-EVFWAVF---NSGLLPSTFVVVKLMSELC 350
E + +R ++ N+ N V V W + SG P+ ++
Sbjct: 175 ELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYF 234
Query: 351 RLGQTEEAVKLLRIVEERKLTCVEEGYA--IVMKALCDHCQVEEASNLFGRMLACGLKPK 408
+ + E+ ++L +++ T +G+A V+ AL + EEA ++ G + +
Sbjct: 235 KTKRIEKGLQLFLKMKKEGYTF--DGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQ 292
Query: 409 LGV-YNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLL 467
V YN+++++ GNLD + E + K PD+ T+T +++ + N A L
Sbjct: 293 DIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHL 352
Query: 468 MEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLE-------NHQLQKLCKLGQLD 520
+ +G P + T N + + L + D ++L +E + LCK G+L
Sbjct: 353 ACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVRDEFTYTSVVHNLCKDGRLV 412
Query: 521 AAYEKAKSMLEKGIHLSAYAR 541
A + S KG+ + + AR
Sbjct: 413 CASKLLLSCYNKGMKIPSSAR 433
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 142/367 (38%), Gaps = 69/367 (18%)
Query: 214 LCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPT 273
LCK ++ E L + PD + I G+ R + A + +M + G+ P
Sbjct: 23 LCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPD 82
Query: 274 RSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNS 333
+ N LI G+ + + + +++F + +S
Sbjct: 83 VTTYNSLI---------SGAAKNL---------------------MLNRVLQLFDEMLHS 112
Query: 334 GLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEG---YAIVMKALCDHCQV 390
GL P + LMS +LG+ EA K+L E+ L + G Y I++ ALC
Sbjct: 113 GLSPDMWSYNTLMSCYFKLGRHGEAFKILH--EDIHLAGLVPGIDTYNILLDALCKSGHT 170
Query: 391 EEASNLFGRMLACGLKPKLGVYNSVISMLCT---LGNLDHAMGVFELMNKKRCLPDNLTY 447
+ A LF + L +KP+L YN +I+ LC +G++D M + K P+ +TY
Sbjct: 171 DNAIELF-KHLKSRVKPELMTYNILINGLCKSRRVGSVDWMM---RELKKSGYTPNAVTY 226
Query: 448 TALIHAHGKVKNWKVAYDLLMEMLGLGWIPE-----------------LQTYNLVDNLLR 490
T ++ + K K + L ++M G+ + + Y + L+R
Sbjct: 227 TTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVR 286
Query: 491 EHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQK 550
RS + N L K G LDA +LE+ I + D + H
Sbjct: 287 SGTRSQDIVSY-----NTLLNLYFKDGNLDA----VDDLLEE-IEMKGLKPDDYTHTIIV 336
Query: 551 NGKLKIA 557
NG L I
Sbjct: 337 NGLLNIG 343
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 109/245 (44%), Gaps = 19/245 (7%)
Query: 334 GLLPSTFVVVKLMS----ELCRLGQTEEAVKLLRIVEERKLTCVEE--GYAIVMKALCDH 387
GL+ + KL++ LC+ E A LL ++ +L + + Y ++K
Sbjct: 4 GLMKFPGISTKLLNISVNSLCKFRNLERAETLL--IDGIRLGVLPDVITYNTLIKGYTRF 61
Query: 388 CQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTY 447
++EA + RM G++P + YNS+IS L+ + +F+ M PD +Y
Sbjct: 62 IGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSY 121
Query: 448 TALIHAHGKVKNWKVAYDLLMEMLGL-GWIPELQTYNLVDNLLREHDRSDLCLKLERKLE 506
L+ + K+ A+ +L E + L G +P + TYN++ + L + +D ++L + L+
Sbjct: 122 NTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLK 181
Query: 507 ----------NHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKI 556
N + LCK ++ + + + + G +A T ++ K +++
Sbjct: 182 SRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEK 241
Query: 557 ARQLL 561
QL
Sbjct: 242 GLQLF 246
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 154/382 (40%), Gaps = 33/382 (8%)
Query: 97 SSNFVLRVLMSYQH-LGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCL 155
SSN V +V+ S ++ + L FFSW+ +G D Y+ L +K M+ L
Sbjct: 66 SSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQIL 125
Query: 156 LMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLC 215
L + + + + SI L + G+ +A+ +F+ ++ F C D ++ LC
Sbjct: 126 LSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDK-FSCPQDGFTVTAIISALC 184
Query: 216 KKQSSEETIELALRIFHKME---SPDTYSCGNTIV-GFCRLGRLGAALEIFSQMNKIGVL 271
S ++ AL + H + S + S +++ G+ + A + M G+
Sbjct: 185 ----SRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGIT 240
Query: 272 PTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVF 331
P N L+ LC RN R + LVP A+ + +
Sbjct: 241 PDLFCFNSLLTCLCE-------------RNVNRNPSGLVPE----------ALNIMLEMR 277
Query: 332 NSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVE 391
+ + P++ L+S L R + E+ ++L ++ Y V++ L +
Sbjct: 278 SYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFG 337
Query: 392 EASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALI 451
+ + + M+ G +P+ Y +I +LC + ++ A+ +FE M + Y LI
Sbjct: 338 KGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLI 397
Query: 452 HAHGKVKNWKVAYDLLMEMLGL 473
K N++ +L E L +
Sbjct: 398 PKLCKGGNFEKGRELWEEALSI 419
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 88/212 (41%), Gaps = 24/212 (11%)
Query: 323 AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMK 382
A +F + G+ P+ ++ C G+ +A +LLR + E+++ ++ ++
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88
Query: 383 ALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLP 442
A +V EA ++ ML + P YNS+I C +D A + + M K C P
Sbjct: 89 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 443 DNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLE 502
D +T++ LI+ + K K ++ EM G + TY +
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL----------------- 191
Query: 503 RKLENHQLQKLCKLGQLDAAYEKAKSMLEKGI 534
+ C++G LDAA + M+ G+
Sbjct: 192 -------IHGFCQVGDLDAAQDLLNEMISCGV 216
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 103/260 (39%), Gaps = 31/260 (11%)
Query: 178 LGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESP 237
L + G A +LF EM G P+ L +N ++ C + +L + K +P
Sbjct: 20 LCKDGNHINAQNLFTEMHEK-GIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINP 78
Query: 238 DTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKV 297
D + I F + ++ A EI+ +M + + PT N +I C ++
Sbjct: 79 DIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC---------KQD 129
Query: 298 RVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEE 357
RV + +R ++ +M + G P L++ C+ + +
Sbjct: 130 RVDDAKR----MLDSMA-----------------SKGCSPDVVTFSTLINGYCKAKRVDN 168
Query: 358 AVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVIS 417
+++ + R + Y ++ C ++ A +L M++CG+ P ++ +++
Sbjct: 169 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLA 228
Query: 418 MLCTLGNLDHAMGVFELMNK 437
LC+ L A + E + K
Sbjct: 229 GLCSKKELRKAFAILEDLQK 248
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 80/193 (41%), Gaps = 11/193 (5%)
Query: 380 VMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKR 439
++ LC A NLF M G+ P + YN +I C G A + M +K+
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 440 CLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCL 499
PD +T++ALI+A K + A ++ EML P TYN + + + DR D
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 500 KLERKLENHQ-----------LQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVF 548
++ + + + CK ++D E M +GI + T H F
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Query: 549 QKNGKLKIARQLL 561
+ G L A+ LL
Sbjct: 196 CQVGDLDAAQDLL 208
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/227 (17%), Positives = 91/227 (40%), Gaps = 5/227 (2%)
Query: 249 FCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVR--VRNTRRPC 306
C+ G A +F++M++ G+ P N +I C + + +R + P
Sbjct: 20 LCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPD 79
Query: 307 TILVP---NMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLR 363
+ N + A E++ + + P+T ++ C+ + ++A ++L
Sbjct: 80 IVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLD 139
Query: 364 IVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLG 423
+ + + ++ ++ C +V+ +F M G+ Y ++I C +G
Sbjct: 140 SMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 199
Query: 424 NLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEM 470
+LD A + M PD +T+ ++ K + A+ +L ++
Sbjct: 200 DLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 145/342 (42%), Gaps = 24/342 (7%)
Query: 126 QMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIH 185
+MG+ D + + D L ++ L + + Q +++ + I R R
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 186 EALSLFEEMETVFGCKPDNLVFNNVLYV------LCKKQSSEETIELALRIFHKME---- 235
EAL +F M ++G KPD F V+ V CK + L++F M+
Sbjct: 514 EALKVFRLM-GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPT----IGLQLFDLMQRNKI 568
Query: 236 SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSL---SEKKG 292
S D C I + R+ A + F+ + + + P N +I CSL E +
Sbjct: 569 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAER 628
Query: 293 SVEKVRVR----NTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSE 348
E ++V NT TIL+ + N+ + A+ +F + G P+ LM
Sbjct: 629 IFELLKVTPFGPNTV-TLTILIHVLCKNND-MDGAIRMFSIMAEKGSKPNAVTYGCLMDW 686
Query: 349 LCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPK 408
+ E + KL ++E+ ++ Y+I++ LC +V+EA+N+F + + L P
Sbjct: 687 FSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 746
Query: 409 LGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTAL 450
+ Y +I C +G L A ++E M + PD+L AL
Sbjct: 747 VVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 161/391 (41%), Gaps = 26/391 (6%)
Query: 156 LMTVASQKG-KVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVL 214
L + A KG K+ S I + G + A +++ M G P+ + + ++ L
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM-LCQGISPNVVTYTILIKGL 401
Query: 215 CKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTR 274
C+ E + +I + P + + I GFC+ G L + ++ M K+G P
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 275 SAVNMLIGELCS----LSEKKGSVEKVRVRNTRRPCTILVPNMGG--NSGAIQPAVEVFW 328
+L+ L L + SV K+ ++ R + + G A++VF
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSV-KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 329 AVFNSGLLP--STFVVVKLMS----ELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMK 382
+ G+ P +TF V +S C+ + ++L +++ K++ +V+
Sbjct: 521 LMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 580
Query: 383 ALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLP 442
L ++E+AS F ++ ++P + YN++I C+L LD A +FEL+ P
Sbjct: 581 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 640
Query: 443 DNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLE 502
+ +T T LIH K + A + M G P TY + + + + KL
Sbjct: 641 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 700
Query: 503 RKLENHQLQK-----------LCKLGQLDAA 522
+++ + LCK G++D A
Sbjct: 701 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 731
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 141/335 (42%), Gaps = 41/335 (12%)
Query: 250 CRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTIL 309
CR G + ALEIF ++GV+ + +V ++ L S++ + + R
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIG-SDRVDLIADHFDKLCR------ 209
Query: 310 VPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERK 369
G I+P SG+ FV+ L C+ G+ +A+ R+V ER
Sbjct: 210 --------GGIEP----------SGVSAHGFVLDAL---FCK-GEVTKALDFHRLVMERG 247
Query: 370 LTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAM 429
V+K L Q+E AS L +L CG P + + ++I+ C G +D A
Sbjct: 248 FRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAF 306
Query: 430 GVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTY-NLVDNL 488
+F++M ++ PD + Y+ LI + K + + L + L G ++ + + +D
Sbjct: 307 DLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVY 366
Query: 489 LREHDRSD--------LCLKLERKLENHQ--LQKLCKLGQLDAAYEKAKSMLEKGIHLSA 538
++ D + LC + + + ++ LC+ G++ A+ +L++G+ S
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426
Query: 539 YARDTFEHVFQKNGKLKIARQLLETTRRVQEPEET 573
+ F K G L+ L E ++ P +
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 102/268 (38%), Gaps = 21/268 (7%)
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAA 258
G P+ + F ++ CK+ + +L + + PD + I G+ + G LG
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 259 LEIFSQM----NKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMG 314
++FSQ K+ V+ S +++ + K G + V R C + PN+
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYV--------KSGDLATASVVYKRMLCQGISPNVV 392
Query: 315 G---------NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIV 365
G I A ++ + G+ PS L+ C+ G L +
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 366 EERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNL 425
+ Y +++ L + A +ML ++ + V+NS+I C L
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 426 DHAMGVFELMNKKRCLPDNLTYTALIHA 453
D A+ VF LM PD T+T ++
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRV 540
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 133/332 (40%), Gaps = 50/332 (15%)
Query: 169 KAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELAL 228
+ ++ ++ + ++ EA + ++ME G +PD + +N + +K ET+
Sbjct: 189 RTFNVLVQAWCKKKKVEEAWEVVKKMEEC-GVRPDTVTYNTIATCYVQKG---ETVRAES 244
Query: 229 RIFHKM-----ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGE 283
+ KM P+ +CG + G+CR GR+ L +M ++ V N LI
Sbjct: 245 EVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLING 304
Query: 284 LCSLSEKKGSVE----------------------KVRVRNTRRPCTI--------LVPNM 313
+ ++ G E KV+V + C + V N
Sbjct: 305 FVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNA 364
Query: 314 GGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLR--IVEERKLT 371
++G ++ A +VF + +G+ P L R + ++A +LL IVE R
Sbjct: 365 WSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNV 424
Query: 372 CVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGV 431
+ + V+ C + +++A +F +M G+ P + + +++ + A V
Sbjct: 425 VI---FTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEV 481
Query: 432 FELMNKKRCLPDNLTYTALIHAHGKVKNWKVA 463
++M P+N T+ L A W+VA
Sbjct: 482 LQMMRGCGVKPENSTFLLLAEA------WRVA 507
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 120/297 (40%), Gaps = 31/297 (10%)
Query: 206 VFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQM 265
++N L LC + E + + + + PD Y+ I G C++GR+ A+++ M
Sbjct: 414 IYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDM 473
Query: 266 NKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVE 325
G AV L +C L + + E + V N P I+P V
Sbjct: 474 -MTGKFCAPDAVT-LNTVMCGLLAQGRAEEALDVLNRVMP-----------ENKIKPGVV 520
Query: 326 VFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALC 385
+ AV L +L + +EA+ + +E+ +T YAI++ LC
Sbjct: 521 AYNAVIRG---------------LFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLC 565
Query: 386 DHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNL 445
+V+ A + ++ + VY + + LC G L A + +P+ +
Sbjct: 566 VTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVV 625
Query: 446 TYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLE 502
Y +I + + AY +L EM G P+ T+ ++D L HD DL ++ E
Sbjct: 626 CYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDKL---HDSMDLTVERE 679
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 94/212 (44%), Gaps = 8/212 (3%)
Query: 159 VASQKGKVSPK--AMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCK 216
V+ +G P ++ I L + GR+ +A+ + ++M T C PD + N V+ L
Sbjct: 436 VSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLA 495
Query: 217 KQSSEETIELALRIFHKME-SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRS 275
+ +EE +++ R+ + + P + I G +L + A+ +F Q+ K V +
Sbjct: 496 QGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADST 555
Query: 276 AVNMLIGELCSLSE---KKGSVEKVRVRNTRRPCTILVPNMGG--NSGAIQPAVEVFWAV 330
++I LC ++ K + V + R + + G SG + A + +
Sbjct: 556 TYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDL 615
Query: 331 FNSGLLPSTFVVVKLMSELCRLGQTEEAVKLL 362
+SG +P+ +++E R G EA ++L
Sbjct: 616 ADSGAIPNVVCYNTVIAECSRSGLKREAYQIL 647
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 132/337 (39%), Gaps = 40/337 (11%)
Query: 207 FNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMN 266
+N ++ LC + +L + ++ PD + I G+C + L A ++F +M
Sbjct: 165 YNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMR 224
Query: 267 KIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEV 326
G+ P +++LIG + + V R+ L M + A
Sbjct: 225 VCGIRPNSLTLSVLIGGFLKMRD---------VETGRKLMKELWEYMKNETDTSMKA--- 272
Query: 327 FWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCD 386
A F L+ +CR G + ++ + + VE Y ++ +LC
Sbjct: 273 --AAF-----------ANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCR 319
Query: 387 HCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLT 446
+ + A+ + M + GLKP+ YN++I LC G A + E ++ P T
Sbjct: 320 YRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYT 379
Query: 447 YTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNL-------------VDNLLREHD 493
Y L+ + K + A ++L ML + YN+ + N+L
Sbjct: 380 YKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSML 439
Query: 494 RSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSML 530
+ D C E L N + LCK+G++D A + M+
Sbjct: 440 QGD-CRPDEYTL-NTVINGLCKMGRVDDAMKVLDDMM 474
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 117/318 (36%), Gaps = 40/318 (12%)
Query: 177 FLGRHGRIHE---ALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHK 233
+G + I E A +F+EM V G +P++L + ++ K + E +L ++
Sbjct: 203 LIGGYCEIRELEVAHKVFDEMR-VCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEY 261
Query: 234 MESPDTYSC-----GNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLS 288
M++ S N + CR G EI M+ + A +I LC
Sbjct: 262 MKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYR 321
Query: 289 EKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSE 348
G A + + + + GL P ++
Sbjct: 322 RNHG------------------------------AARIVYIMKSKGLKPRRTSYNAIIHG 351
Query: 349 LCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPK 408
LC+ G A +LL E + E Y ++M++LC +A N+ ML +
Sbjct: 352 LCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADR 411
Query: 409 LGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLM 468
+YN + LC + N + V M + C PD T +I+ K+ A +L
Sbjct: 412 TRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLD 471
Query: 469 EML-GLGWIPELQTYNLV 485
+M+ G P+ T N V
Sbjct: 472 DMMTGKFCAPDAVTLNTV 489
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 159/409 (38%), Gaps = 42/409 (10%)
Query: 186 EALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNT 245
EAL + + + + G +PD+L ++V++ LC +E L PD +C N
Sbjct: 73 EALRILDGL-CLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTC-NV 130
Query: 246 IVGFCRLGRLGAALEIFSQMNKIGVL-----------PTRSAVNMLIGELCSLS---EKK 291
I+ R S ++ +GV+ P+ + N L+ +LC++ +
Sbjct: 131 IIARLLYSR--------SPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAH 182
Query: 292 GSVEKVRVRNTRRPCTILVPNMGG--NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSEL 349
V +R R +GG ++ A +VF + G+ P++ + L+
Sbjct: 183 KLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGF 242
Query: 350 CRLGQTEEAVKLLR-----IVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACG 404
++ E KL++ + E + +A ++ ++C + + M C
Sbjct: 243 LKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCE 302
Query: 405 LKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAY 464
Y +I LC A + +M K P +Y A+IH K AY
Sbjct: 303 SVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAY 362
Query: 465 DLLMEMLGLGWIPELQTYNLV-DNLLREHD----RSDLCLKLER------KLENHQLQKL 513
LL E + P TY L+ ++L +E D R+ L L L + ++ N L+ L
Sbjct: 363 QLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGL 422
Query: 514 CKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLE 562
C + SML+ Y +T + K G++ A ++L+
Sbjct: 423 CVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLD 471
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 122/279 (43%), Gaps = 38/279 (13%)
Query: 237 PDTYS---CGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGS 293
PD S + IV + + L +L +F + K + T ++N L+ C +++
Sbjct: 111 PDLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFA-CLVAKDYKE 169
Query: 294 VEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVF---WAVF-----------------NS 333
++V + +P M G I+P +E + VF
Sbjct: 170 AKRVYIE---------MPKMYG----IEPDLETYNRMIKVFCESGSASSSYSIVAEMERK 216
Query: 334 GLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEA 393
G+ P++ ++S +++E K+L ++++R + Y I +++LC + +EA
Sbjct: 217 GIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEA 276
Query: 394 SNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHA 453
L ML+ G+KP Y+ +I C + + A +F++M + C PD+ Y LI+
Sbjct: 277 KALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYY 336
Query: 454 HGKVKNWKVAYDLLMEMLGLGWIPELQTY-NLVDNLLRE 491
K +++ A L E + W+P +LV+ L ++
Sbjct: 337 LCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKD 375
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 93/220 (42%), Gaps = 5/220 (2%)
Query: 186 EALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNT 245
EA ++ EM ++G +PD +N ++ V C+ S+ + + + K P++ S G
Sbjct: 169 EAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLM 228
Query: 246 IVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVR--VRNTR 303
I GF + ++ + M GV S N+ I LC + K + + +
Sbjct: 229 ISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGM 288
Query: 304 RPCTILVPNMGG---NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVK 360
+P T+ ++ N + A ++F + N G P + L+ LC+ G E A+
Sbjct: 289 KPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALS 348
Query: 361 LLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRM 400
L + E+ ++ L +VEEA L G++
Sbjct: 349 LCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQV 388
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 173/408 (42%), Gaps = 23/408 (5%)
Query: 80 PGDTAIDHVLDRYKGDLSSNFVLRVLMSYQHLGRAKTLNFFSWAGT-QMGFQFDDSVVEY 138
P +D +LD Y+ S+ V +L+ R L F + GF +
Sbjct: 145 PDSDLVDSLLDTYEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNT 204
Query: 139 MADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSI--CIRFLGRHGRIHEALSLFEEMET 196
+ + + K+ DD+ + A K ++ P ++I I+ L + GR+ E + L ++
Sbjct: 205 LIHYSSKSKI-DDLVWRIYECAIDK-RIYPNEITIRIMIQVLCKEGRLKEVVDL---LDR 259
Query: 197 VFG--CKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGR 254
+ G C P +V ++++ + ++ EE++ L R+ K DT + + G
Sbjct: 260 ICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGD 319
Query: 255 LGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPN-- 312
L +A ++F +M + G + + C +KG V++ + + + P
Sbjct: 320 LVSARKVFDEMLQRGFSANSFVYTVFVRVCC----EKGDVKEAERLLSEMEESGVSPYDE 375
Query: 313 -----MGGNS--GAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIV 365
+GG + G + +E + GL+PS +++ + ++ A ++L
Sbjct: 376 TFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKS 435
Query: 366 EERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNL 425
++ E Y+ +++ + +++A LF M + P V+ S+I LCT G +
Sbjct: 436 IDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKV 495
Query: 426 DHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGL 473
+ ++M K+ P+ Y ALI A K+ + A + EM+ +
Sbjct: 496 EAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMISV 543
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 82/187 (43%), Gaps = 11/187 (5%)
Query: 377 YAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMN 436
Y + ++ C+ V+EA L M G+ P +N +I G + + E+M
Sbjct: 342 YTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMV 401
Query: 437 KKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSD 496
+ +P + ++ + K++N A ++L + + G++P+ TY+ + E + D
Sbjct: 402 TRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDID 461
Query: 497 LCLKLERKLENHQLQK-----------LCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFE 545
LKL ++E ++ LC G+++A + K M ++ I +A D
Sbjct: 462 QALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALI 521
Query: 546 HVFQKNG 552
FQK G
Sbjct: 522 KAFQKIG 528
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 143/370 (38%), Gaps = 55/370 (14%)
Query: 166 VSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNV-LY-VLCKKQSSEET 223
SP+A S+ LGR L L + PD F +V LY S+ +
Sbjct: 236 ASPRACSVLFTLLGRERMADYILLLLSNL-------PDKEEFRDVRLYNAAISGLSASQR 288
Query: 224 IELALRIFHKMES----PDTYSCGNTIVGFCRLGRLGAAL-EIFSQMNKIGVLPTRSAVN 278
+ A ++ M+ PD +C I + GR + EIF +M++ GV ++
Sbjct: 289 YDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFG 348
Query: 279 MLIGELCS--LSEKKGSVEKVRVRNTRRPCTILVPNM---GGNSGAIQPAVEVFWAVFNS 333
L+ C L E+ ++ + R TI+ + S I+ +F + +
Sbjct: 349 GLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDK 408
Query: 334 GLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEE- 392
GL PS LM R Q + LLR +E+ L + Y ++ A ++ +
Sbjct: 409 GLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDM 468
Query: 393 ASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIH 452
A++ F RM GLKP Y ++I G + A FE M K+ P TYT+++
Sbjct: 469 AADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLD 528
Query: 453 A------------------HGKVKNWKVAY-----------------DLLMEMLGLGWIP 477
A K+K ++ Y D++ E +G P
Sbjct: 529 AFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQP 588
Query: 478 ELQTYNLVDN 487
+ TYN++ N
Sbjct: 589 SVMTYNMLMN 598
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/343 (19%), Positives = 141/343 (41%), Gaps = 10/343 (2%)
Query: 161 SQKG-KVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQS 219
S+KG K S ++ G EAL + EME G + + +V+N ++ K
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKK-GIRSNTIVYNTLMDAYNKSNH 394
Query: 220 SEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNM 279
EE L + K P + + + R + + +M +G+ P +
Sbjct: 395 IEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTC 454
Query: 280 LI---GELCSLSEKKGS----VEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFN 332
LI G +S+ ++KV ++ + T L+ + SG + A F +
Sbjct: 455 LISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALI-HAYSVSGWHEKAYASFEEMCK 513
Query: 333 SGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEE 392
G+ PS ++ R G T + +++ +++ K+ Y ++ E
Sbjct: 514 EGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIE 573
Query: 393 ASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIH 452
A ++ GL+P + YN +++ G + + M PD++TY+ +I+
Sbjct: 574 ARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIY 633
Query: 453 AHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRS 495
A +V+++K A+ M+ G +P+ ++Y + +L + ++
Sbjct: 634 AFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKT 676
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 108/243 (44%), Gaps = 13/243 (5%)
Query: 323 AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQT-EEAVKLLRIVEERKLTCVEEGYAIVM 381
A EV+ A+ + P L++ L + G++ +E ++ + E+ + ++ + ++
Sbjct: 292 AWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLV 351
Query: 382 KALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCL 441
K+ CD EEA + M G++ VYN+++ +++ G+F M K
Sbjct: 352 KSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLK 411
Query: 442 PDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN-LVDNLLREHDRSDLC-- 498
P TY L+ A+ + + LL EM LG P +++Y L+ R SD+
Sbjct: 412 PSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAAD 471
Query: 499 --LKLER---KLENHQLQKLCKLGQLDAAYEKA----KSMLEKGIHLSAYARDTFEHVFQ 549
L++++ K +H L + +EKA + M ++GI S + F+
Sbjct: 472 AFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFR 531
Query: 550 KNG 552
++G
Sbjct: 532 RSG 534
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 174/443 (39%), Gaps = 59/443 (13%)
Query: 98 SNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLM 157
S+ + RVL ++ + +A FF+WA GF+ D M D G M +
Sbjct: 89 SHIINRVLKAHPPMQKAWL--FFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFH 146
Query: 158 TVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKK 217
+ + + + I ++ G + A+ L+EEM GC+P + + + +L
Sbjct: 147 LMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDN-GCEPTVVSYTAYMKMLFAD 205
Query: 218 QSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAV 277
EE E+ + SP+ ++ + G+ AL+IF +M +IGV P ++A
Sbjct: 206 GRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAAC 265
Query: 278 NMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVP---------NMGGNSGAIQPAVEVFW 328
N+LI + E + +V V + P G S + V
Sbjct: 266 NILIAKALKFGE-TSFMTRVLVYMKENGVVLRYPIFVEALETLKAAGESDDLLREVNSHI 324
Query: 329 AVFN--SGLLPSTFVV----------VKLMSELCRLGQTEEAVK-LLRIVEERKLTCVEE 375
+V + S + T +++S + + Q AV LL + +R +
Sbjct: 325 SVESLCSSDIDETPTAEVNDTKNSDDSRVISSVLLMKQNLVAVDILLNQMRDRNIKLDSF 384
Query: 376 GYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVY-------------NSVISMLCTL 422
+ +++ CD C+ E AS F L G+ K Y VI ++ +
Sbjct: 385 VVSAIIETNCDRCRTEGASLAFDYSLEMGIHLKKSAYLALIGNFLRSNELPKVIEVVKEM 444
Query: 423 GNLDHAMGVFE---LMNK----KR---------CLPDN----LTYTALIHAHGKVKNWKV 462
H++G ++ L+++ +R LPD+ YTAL+ + + +
Sbjct: 445 VKAQHSLGCYQGAMLIHRLGFGRRPRLAADVFDLLPDDQKGVAAYTALMDVYISAGSPEK 504
Query: 463 AYDLLMEMLGLGWIPELQTYNLV 485
A +L EM +P L TY+++
Sbjct: 505 AMKILREMREREIMPSLGTYDVL 527
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 96/464 (20%), Positives = 170/464 (36%), Gaps = 64/464 (13%)
Query: 101 VLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVA 160
+ RVL+ +Q ++ + FF W +FD LG+R + CLL+ +
Sbjct: 82 ISRVLLRFQS-DASRAITFFKWV------KFD----------LGKRPNVGNY-CLLLHIL 123
Query: 161 SQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSS 220
K P AM + + E + C D +VF+ ++ K
Sbjct: 124 VSSKKF-PLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLV 182
Query: 221 EETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNML 280
EE + + S +C + + G +L + +++S M ++G+ P N+L
Sbjct: 183 EEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNIL 242
Query: 281 IGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTF 340
C N + + + G P
Sbjct: 243 TNVFC------------------------------NDSNFREVDDFLEKMEEEGFEPDLV 272
Query: 341 VVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRM 400
L+S CR G+ +EA L +I+ R++ Y ++K LC +V EA F RM
Sbjct: 273 TYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRM 332
Query: 401 LACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNW 460
+ G+KP YN++I C G + + + M +PD T ++ +
Sbjct: 333 VDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRL 392
Query: 461 KVAYDLLMEMLGLGW-IPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQL 519
A + ++E+ L IP + + D L+ LC + + H L ++ +
Sbjct: 393 LSAVNFVVELRRLKVDIP----FEVCDFLI-----VSLCQEGKPFAAKHLLDRIIEEEGH 443
Query: 520 DAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIARQLLET 563
+A E +++E S D E GKLK Q+L+
Sbjct: 444 EAKPETYNNLIE-----SLSRCDAIEEALVLKGKLKNQNQVLDA 482
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 121/304 (39%), Gaps = 31/304 (10%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
I+ L + GR+ EA F M G KPD + +N ++Y CK+ +++ +L +
Sbjct: 313 IKGLCKDGRVREAHQTFHRMVDR-GIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNS 371
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV 294
PD ++C + GF R GRL +A+ ++ ++ V + LI LC
Sbjct: 372 VVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQ-------- 423
Query: 295 EKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQ 354
G A + ++ P T+ L+ L R
Sbjct: 424 -------------------EGKPFAAKHLLDRIIEEEGHEAKPETY--NNLIESLSRCDA 462
Query: 355 TEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNS 414
EEA+ L ++ + + Y ++ LC + EA +L M +KP + +
Sbjct: 463 IEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGA 522
Query: 415 VISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVK-NWKVAYDLLMEMLGL 473
++ C + D A + L + + D +Y +L+ A + +K A +L M L
Sbjct: 523 LVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRL 582
Query: 474 GWIP 477
G++P
Sbjct: 583 GFVP 586
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 124/298 (41%), Gaps = 23/298 (7%)
Query: 184 IHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCG 243
E E+ME G +PD + +N ++ C++ +E L ++ + PD +
Sbjct: 252 FREVDDFLEKMEEE-GFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYT 310
Query: 244 NTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVR----- 298
+ I G C+ GR+ A + F +M G+ P + N LI C K+G +++ +
Sbjct: 311 SLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYC----KEGMMQQSKKLLHE 366
Query: 299 -----VRNTRRPCTILVPNM---GGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELC 350
V R C ++V G A+ VE+ + F++V LC
Sbjct: 367 MLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVS----LC 422
Query: 351 RLGQTEEAVKLL-RIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKL 409
+ G+ A LL RI+EE E Y ++++L +EEA L G++
Sbjct: 423 QEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDA 482
Query: 410 GVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLL 467
Y ++I LC +G A + M PD+ AL++ + K ++ A LL
Sbjct: 483 KTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLL 540
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 114/285 (40%), Gaps = 18/285 (6%)
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAA 258
G P+ FN + V C + E + ++ + PD + + +CR GRL A
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 259 LEIFSQMNKIGVLPTRSAVNMLIGELCS---LSEKKGSVEKVRVRNTRRPCTILVPNMGG 315
++ M + V+P LI LC + E + ++ R + C M
Sbjct: 291 FYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC------MSY 344
Query: 316 NS--------GAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEE 367
N+ G +Q + ++ + + ++P F ++ R G+ AV + +
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRR 404
Query: 368 RKLTCVEEGYAIVMKALCDHCQVEEASNLFGRML-ACGLKPKLGVYNSVISMLCTLGNLD 426
K+ E ++ +LC + A +L R++ G + K YN++I L ++
Sbjct: 405 LKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIE 464
Query: 427 HAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEML 471
A+ + + + + D TY ALI ++ + A L+ EM
Sbjct: 465 EALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMF 509
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 141/324 (43%), Gaps = 31/324 (9%)
Query: 148 LFDDMKCLLMTVASQKGKVSPK--AMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNL 205
LFD+M+ + ++P S I G+ G ALS ++ME D +
Sbjct: 177 LFDEMR---------QRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQD-RVSGDLV 226
Query: 206 VFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQM 265
+++N++ + + + I + R+ +PD + + I + + A + +M
Sbjct: 227 LYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEM 286
Query: 266 NKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRR---------PCTILVPNMGGN 316
N+ GVLP + + L L E +E + V + C I++ ++ G
Sbjct: 287 NEAGVLPNTVSYSTL---LSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMI-DVYGQ 342
Query: 317 SGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTE---EAVKLLRIVEERKLTCV 373
++ A +FW++ + P+ VV + L G+ E EA+ L R+++ + +
Sbjct: 343 LDMVKEADRLFWSLRKMDIEPN---VVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQN 399
Query: 374 EEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFE 433
Y ++K + E+A+NL M + G++P Y+++IS+ G LD A +F+
Sbjct: 400 VVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQ 459
Query: 434 LMNKKRCLPDNLTYTALIHAHGKV 457
+ D + Y +I A+ +V
Sbjct: 460 KLRSSGVEIDQVLYQTMIVAYERV 483
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 162/403 (40%), Gaps = 47/403 (11%)
Query: 136 VEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPK--AMSICIRFLGRHGRIHEALSLFEE 193
+ +M L R + LL V ++ K +P A ++ +R + R + A LF+E
Sbjct: 122 IRFMVSLLSRENDWQRSLALLDWV-HEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDE 180
Query: 194 METVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKME----SPDTYSCGNTIVGF 249
M PD ++ ++ K E + AL KME S D N I
Sbjct: 181 MRQR-ALAPDRYTYSTLITSFGK----EGMFDSALSWLQKMEQDRVSGDLVLYSNLIELS 235
Query: 250 CRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTIL 309
RL A+ IFS++ + G+ P A N +I
Sbjct: 236 RRLCDYSKAISIFSRLKRSGITPDLVAYNSMI---------------------------- 267
Query: 310 VPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERK 369
N+ G + + A + + +G+LP+T L+S + EA+ + E ++
Sbjct: 268 --NVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVF--AEMKE 323
Query: 370 LTCVEEGYA--IVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDH 427
+ C + I++ V+EA LF + ++P + YN+++ +
Sbjct: 324 VNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGE 383
Query: 428 AMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDN 487
A+ +F LM +K + +TY +I +GK + A +L+ EM G P TY+ + +
Sbjct: 384 AIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIIS 443
Query: 488 LLREHDRSDLCLKLERKLENHQLQKLCKLGQ-LDAAYEKAKSM 529
+ + + D L +KL + ++ L Q + AYE+ M
Sbjct: 444 IWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLM 486
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 159/394 (40%), Gaps = 28/394 (7%)
Query: 90 DRYKGDL--SSNFV--LRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGR 145
DR GDL SN + R L Y +K ++ FS + G D M + G+
Sbjct: 219 DRVSGDLVLYSNLIELSRRLCDY-----SKAISIFS-RLKRSGITPDLVAYNSMINVYGK 272
Query: 146 RKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNL 205
KLF + + L+ + + + S + + + EALS+F EM+ V C D
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEV-NCALDLT 331
Query: 206 VFNNVLYVLCKKQSSEETIELALRIF---HKME-SPDTYSCGNTIVGFCRLGRLGAALEI 261
N ++ + ++ A R+F KM+ P+ S + + G A+ +
Sbjct: 332 TCN----IMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHL 387
Query: 262 FSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTR--RPCTIL---VPNMGGN 316
F M + + N +I E + + V+ +R P I + ++ G
Sbjct: 388 FRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGK 447
Query: 317 SGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEG 376
+G + A +F + +SG+ + ++ R+G A +LL ++ E
Sbjct: 448 AGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETA 507
Query: 377 YAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMN 436
I+ KA + EEA+ +F + G + V+ +I++ + + VFE M
Sbjct: 508 ITILAKA----GRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMR 563
Query: 437 KKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEM 470
PD+ +++A+GK + ++ A + EM
Sbjct: 564 TAGYFPDSNVIAMVLNAYGKQREFEKADTVYREM 597
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/415 (20%), Positives = 169/415 (40%), Gaps = 25/415 (6%)
Query: 85 IDHVLDRYKGDLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVV-EYMADFL 143
I +LD+ DL+ VL V+ ++ K S + S++ + D L
Sbjct: 96 IKRILDKCGIDLTEELVLEVV--NRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILDVL 153
Query: 144 GRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPD 203
G+ + F++ + ++ + G V+ K + + ++ EA+ +FE + FG D
Sbjct: 154 GKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKE-FGIDDD 212
Query: 204 NLVFNNVLYVLCKKQSSEETIELALRIF---HKMESPDTYSCGNTIVGFCRLGRLGAALE 260
+ F+ +L LC+ + +E A +F + D + + G+C LG + A
Sbjct: 213 LVAFHGLLMWLCRYKH----VEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKR 268
Query: 261 IFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVR-VRNTRRPCTILVPNMGGNS-- 317
+ + P + +I L + ++E R + +TRR + + N ++
Sbjct: 269 FWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALC 328
Query: 318 --GAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEE 375
I A+EVF + G P+ L+ LC++ +TE+ +L+ +E + +C
Sbjct: 329 FKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPN 388
Query: 376 GYAIVMKALCDHCQ-VEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFEL 434
+ L + Q ++ + RM + +YN + + + ++
Sbjct: 389 D--VTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSE 446
Query: 435 MNKKRCLPDNLTYTALIHA---HGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVD 486
M + PD TYT IH GK+ A EM+ G +PE +T L++
Sbjct: 447 MERSGLGPDQRTYTIRIHGLHTKGKIGE---ALSYFQEMMSKGMVPEPRTEMLLN 498
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 173/436 (39%), Gaps = 66/436 (15%)
Query: 80 PGDTAIDHVLDRYKGDLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEY- 138
P + + +L R + D + F FF WAG Q G+ SV EY
Sbjct: 125 PSNELVVEILSRVRNDWETAFT-----------------FFVWAGKQQGYV--RSVREYH 165
Query: 139 -MADFLGRRKLFDDMKCLLMTVASQKGKVSP-----KAMSICIRFLGRHGRIHEALSLFE 192
M LG+ + FD T+ + K SP + + I IR + +A++ F
Sbjct: 166 SMISILGKMRKFD----TAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFH 221
Query: 193 EMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIF-HKMESP-DTYSCGNTIVGFC 250
+ F + F ++L LC+ ++ + L IF +K + P D S + G+C
Sbjct: 222 AYKR-FKLEMGIDDFQSLLSALCRYKNVSDAGHL---IFCNKDKYPFDAKSFNIVLNGWC 277
Query: 251 R-LGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTIL 309
+G A ++ +M +GV + + +I S K GS+ KV R +
Sbjct: 278 NVIGSPREAERVWMEMGNVGVKHDVVSYSSMI----SCYSKGGSLNKVLKLFDRMKKECI 333
Query: 310 VPNMGGNSGAIQPAVEVFWAVFNS-------------GLLPSTFVVVKLMSELCRLGQTE 356
P+ + + + A F S G+ P+ L+ LC+ +TE
Sbjct: 334 EPDRKVYNAVVHALAK---ASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTE 390
Query: 357 EAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVI 416
EA ++ + E+ L Y M+ L EE L +M G +P + Y +I
Sbjct: 391 EAKQVFDEMLEKGLFPTIRTYHAFMRILRTG---EEVFELLAKMRKMGCEPTVETYIMLI 447
Query: 417 SMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHA---HGKVKNWKVAYDLLMEMLGL 473
LC + D+ + +++ M +K PD +Y +IH +GK++ AY EM
Sbjct: 448 RKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEE---AYGYYKEMKDK 504
Query: 474 GWIPELQTYNLVDNLL 489
G P +++ +
Sbjct: 505 GMRPNENVEDMIQSWF 520
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 34/220 (15%)
Query: 345 LMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHC-QVEEASNLFGRMLAC 403
L+S LCR +A L+ + K + + IV+ C+ EA ++ M
Sbjct: 238 LLSALCRYKNVSDAGHLI-FCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNV 296
Query: 404 GLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVA 463
G+K + Y+S+IS G+L+ + +F+ M K+ PD Y A++HA K A
Sbjct: 297 GVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEA 356
Query: 464 YDLLMEM-LGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAA 522
+L+ M G P + TYN + ++ LCK + + A
Sbjct: 357 RNLMKTMEEEKGIEPNVVTYNSL------------------------IKPLCKARKTEEA 392
Query: 523 YEKAKSMLEKGIHLS-----AYAR--DTFEHVFQKNGKLK 555
+ MLEKG+ + A+ R T E VF+ K++
Sbjct: 393 KQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMR 432
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 128/335 (38%), Gaps = 43/335 (12%)
Query: 111 LGRAKTLNFFSWAGTQ---MGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVS 167
LGR + N + G+ + Y+ KL + + +
Sbjct: 94 LGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQ 153
Query: 168 PKAMSICIRFLGRH-GRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIEL 226
PK ++ + L H G + +A LF+ + G P+ +N ++ C + + +
Sbjct: 154 PKHLNRILDVLVSHRGYLQKAFELFKS-SRLHGVMPNTRSYNLLMQAFC----LNDDLSI 208
Query: 227 ALRIFHKMES----PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIG 282
A ++F KM PD S I GFCR G++ A+E+ M G +P R + L+
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLN 268
Query: 283 ELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVV 342
LC ++ + + K+ R + C P++ +N+ +L
Sbjct: 269 SLCRKTQLREAY-KLLCRMKLKGCN---PDL---------------VHYNTMIL------ 303
Query: 343 VKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLA 402
CR + +A K+L + + Y ++ LCD +E M++
Sbjct: 304 -----GFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMIS 358
Query: 403 CGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNK 437
G P V N ++ C+ G ++ A V E++ K
Sbjct: 359 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMK 393
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 11/193 (5%)
Query: 353 GQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVY 412
G ++A +L + + Y ++M+A C + + A LFG+ML + P + Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 413 NSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLG 472
+I C G ++ AM + + M K +PD L+YT L+++ + + AY LL M
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 473 LGWIPELQTYN-LVDNLLREHDRSDLCLKLERKLEN----------HQLQKLCKLGQLDA 521
G P+L YN ++ RE D L+ L N + LC G D
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348
Query: 522 AYEKAKSMLEKGI 534
+ + M+ KG
Sbjct: 349 GKKYLEEMISKGF 361
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 14/241 (5%)
Query: 318 GAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGY 377
G +Q A E+F + G++P+T LM C A +L + ER + + Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 378 AIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNK 437
I+++ C QV A L ML G P Y ++++ LC L A + M
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 438 KRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTY-----NLVDNLLREH 492
K C PD + Y +I + A +L +ML G P +Y L D + +
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348
Query: 493 DRSDLCLKLERKLENH------QLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEH 546
+ L + + H ++ C G+++ A + + +++ G L + DT+E
Sbjct: 349 GKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHS---DTWEM 405
Query: 547 V 547
V
Sbjct: 406 V 406
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 155/405 (38%), Gaps = 60/405 (14%)
Query: 120 FSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLG 179
F G +G Q D+S M F R + + G+ SP+ R L
Sbjct: 368 FPSDGKHVGHQIDES----MPQFPARN----------FELHNSNGR-SPETSDAYNRLL- 411
Query: 180 RHGRIHEALSLFEE--------METVF------GCKPD----------NLVFN------N 209
R GRI + +SL E+ M+ ++ CK L+ N N
Sbjct: 412 RDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLILNPTMSTFN 471
Query: 210 VLYVLCKKQSSEETIELALRIFHKMESPDTYSCG--NTIVGFC-RLGRLGAALEIFSQMN 266
+L +C E LR+ ES T C T++ C + G++ A E+F QM+
Sbjct: 472 MLMSVCASSQDIEGARGVLRLVQ--ESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMS 529
Query: 267 KIGVLPTRSAVNMLI------GELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAI 320
GV LI G++ G + V+ R L+ + G SGA+
Sbjct: 530 NSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALI-SACGQSGAV 588
Query: 321 QPAVEVF--WAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYA 378
A +V + P + LM C GQ E A ++ +++ + + E Y
Sbjct: 589 DRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYT 648
Query: 379 IVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKK 438
I + + + A +++ M + P ++++I + LD A G+ + +
Sbjct: 649 IAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQ 708
Query: 439 RCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN 483
++Y++L+ A K+WK A +L ++ + P + T N
Sbjct: 709 GIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMN 753
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 125/307 (40%), Gaps = 41/307 (13%)
Query: 179 GRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMES-- 236
R G++ +A + + + KPD +VFN L C + + ++ A + +M++
Sbjct: 548 ARAGQVAKAFGAYGILRSK-NVKPDRVVFN-ALISACGQSGA---VDRAFDVLAEMKAET 602
Query: 237 ----PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKG 292
PD S G + C G++ A E++ ++K G+
Sbjct: 603 HPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGI---------------------- 640
Query: 293 SVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRL 352
R T TI V N SG A ++ + + P L+
Sbjct: 641 -------RGTPEVYTIAV-NSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHA 692
Query: 353 GQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVY 412
+EA +L+ + + + Y+ +M A C+ ++A L+ ++ + L+P +
Sbjct: 693 KMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTM 752
Query: 413 NSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLG 472
N++I+ LC L AM + + P+ +TY+ L+ A + +++V++ LL + G
Sbjct: 753 NALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKG 812
Query: 473 LGWIPEL 479
G P L
Sbjct: 813 DGVSPNL 819
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 179/479 (37%), Gaps = 83/479 (17%)
Query: 95 DLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLG---RRKLFDD 151
DL +FV+RV S G+ + F WA S+VE + + RR
Sbjct: 154 DLHLDFVVRVFESPGISGK-NLIRFLKWATQNEEITVTTSLVESLLVAIASDTRRMDAYG 212
Query: 152 MKCLLMTVASQK--GKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNN 209
+ L+ + ++ G ++ + ++ I G+ G+ A +F + E FG P+ +
Sbjct: 213 LWDLVKEIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTEE-FGFTPNAKTYYL 271
Query: 210 VLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFS-QMNKI 268
L LCK+ + + ++ + GN I FC+ G+ A ++ K
Sbjct: 272 TLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKE 331
Query: 269 GVLPTRSAVNMLIGELCS-------LSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQ 321
LP R V LI LC E G + R +P + ++ ++ ++
Sbjct: 332 KSLPPR-FVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRN-VK 389
Query: 322 PAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVM 381
A + + + G P V ++ + G +EA ++L+++E R
Sbjct: 390 DAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESR------------- 436
Query: 382 KALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCL 441
GLKP + Y +IS G +D A + KK
Sbjct: 437 ----------------------GLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKK 474
Query: 442 PDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKL 501
+TY ALI + K++ + A LL EM G P YN +
Sbjct: 475 LSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKL---------------- 518
Query: 502 ERKLENHQLQKLCKLGQLDAAYEKAKSMLE----KGIHLSAYARDTFEHVFQKNGKLKI 556
+Q C L LD +EKA+ + E KG+HL+A ++ V + + K+
Sbjct: 519 --------IQSFC-LKALD--WEKAEVLFEEMKQKGLHLNAISQGLIRAVKEMESEAKV 566
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 101/262 (38%), Gaps = 60/262 (22%)
Query: 341 VVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRM 400
++ +L++ +LG+++ A + EE T + Y + ++ALC ++ A ++ +M
Sbjct: 233 ILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKM 292
Query: 401 LACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELM-NKKRCLPDNLT------------- 446
L G+ + ++I+ C G + A V+EL K++ LP
Sbjct: 293 LKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGT 352
Query: 447 ----------------------YTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNL 484
++ +IH+ +++N K A LL++M+ G P +NL
Sbjct: 353 ITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNL 412
Query: 485 VDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTF 544
V + K G LD A E K M +G+ Y
Sbjct: 413 V------------------------VHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVI 448
Query: 545 EHVFQKNGKLKIARQLLETTRR 566
+ K G + A+++L ++
Sbjct: 449 ISGYAKGGMMDEAQEILAEAKK 470
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 9/189 (4%)
Query: 328 WAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDH 387
W + S P L+ + Q +EA L + E + E+ YA+++KA C
Sbjct: 144 WILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMA 203
Query: 388 CQVEEASNLFGRMLACGLKPK---LGVYNSVI-SMLCTLGNLDHAMGVFELMNKKRCLPD 443
+E A + M + PK + VYN+ I ++ GN + A+ VF+ M + RC P
Sbjct: 204 GLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPT 263
Query: 444 NLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLER 503
TY +I+ +GK +++ L EM P + TY + N R LC K E
Sbjct: 264 TETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFA---REGLCEKAEE 320
Query: 504 KLENHQLQK 512
E QLQ+
Sbjct: 321 IFE--QLQE 327
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 131/322 (40%), Gaps = 8/322 (2%)
Query: 138 YMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETV 197
Y+ + R+ ++ + + + K + + ++ I G+ + + + L+ EM +
Sbjct: 234 YIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRS- 292
Query: 198 FGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGA 257
CKP+ + ++ ++ E+ E+ ++ PD Y + + R G
Sbjct: 293 HQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYG 352
Query: 258 ALEIFSQMNKIGVLPTRSAVNMLI---GELCSLSEKKGSVEKVR---VRNTRRPCTILVP 311
A EIFS M +G P R++ N+++ G S+ + E+++ + T + +L+
Sbjct: 353 AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLS 412
Query: 312 NMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLT 371
+ + + + +G+ P TFV+ +++ RLGQ + K+L +E T
Sbjct: 413 AY-SKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCT 471
Query: 372 CVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGV 431
Y I++ +E LF + +P + + S I + V
Sbjct: 472 ADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEV 531
Query: 432 FELMNKKRCLPDNLTYTALIHA 453
FE M C PD T L+ A
Sbjct: 532 FEEMIDSGCAPDGGTAKVLLSA 553
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 133/338 (39%), Gaps = 20/338 (5%)
Query: 156 LMTVASQKGKVSPKAMSICIR------FLGRHGRIHEALSLFEEMETVFGCKPDNLVFNN 209
++ V Q VSPK + + + + R G EA+ +F+ M+ CKP +N
Sbjct: 211 VVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRD-RCKPTTETYNL 269
Query: 210 VLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIG 269
++ + K S + +L + P+ + + F R G A EIF Q+ + G
Sbjct: 270 MINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 329
Query: 270 VLPTRSAVNMLIGELCSLSEKKGSVEKVRVRN------TRRPCTILVPNMGGNSGAIQPA 323
+ P N L+ G+ E + R I+V + G +G A
Sbjct: 330 LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMV-DAYGRAGLHSDA 388
Query: 324 VEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKA 383
VF + G+ P+ + L+S + + K IV+E VE ++
Sbjct: 389 EAVFEEMKRLGIAPTMKSHMLLLSAYSK---ARDVTKCEAIVKEMSENGVEPDTFVLNSM 445
Query: 384 LCDHC---QVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRC 440
L + Q + + M + YN +I++ G L+ +F + +K
Sbjct: 446 LNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNF 505
Query: 441 LPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPE 478
PD +T+T+ I A+ + K + ++ EM+ G P+
Sbjct: 506 RPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPD 543
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 97/245 (39%), Gaps = 9/245 (3%)
Query: 251 RLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPC---- 306
R G A+++F +M + PT N++I L + K K+ C
Sbjct: 241 RKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN-LYGKASKSYMSWKLYCEMRSHQCKPNI 299
Query: 307 ---TILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLR 363
T LV N G + A E+F + GL P +V LM R G A ++
Sbjct: 300 CTYTALV-NAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFS 358
Query: 364 IVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLG 423
+++ Y I++ A +A +F M G+ P + + ++S
Sbjct: 359 LMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKAR 418
Query: 424 NLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN 483
++ + + M++ PD ++++ +G++ + +L EM ++ TYN
Sbjct: 419 DVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYN 478
Query: 484 LVDNL 488
++ N+
Sbjct: 479 ILINI 483
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 123/299 (41%), Gaps = 13/299 (4%)
Query: 201 KPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESP--DTYSCGNTIVGFCRLGRLGAA 258
+PD + FN ++ +K +E L +++ P DTY+ I +C G + A
Sbjct: 152 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYAL--LIKAYCMAGLIERA 209
Query: 259 LEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKV-----RVRNTR-RPCT---IL 309
+ +M V P V + + L ++KG+ E+ R++ R +P T L
Sbjct: 210 EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNL 269
Query: 310 VPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERK 369
+ N+ G + + +++ + + P+ L++ R G E+A ++ ++E
Sbjct: 270 MINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 329
Query: 370 LTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAM 429
L Y +M++ A+ +F M G +P YN ++ G A
Sbjct: 330 LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 389
Query: 430 GVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNL 488
VFE M + P ++ L+ A+ K ++ ++ EM G P+ N + NL
Sbjct: 390 AVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 448
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 151/367 (41%), Gaps = 59/367 (16%)
Query: 179 GRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETI-ELALRIFHKMESP 237
G GRI EA+ +F ++ F C P N +L VL +K+ S E + E+ ++
Sbjct: 119 GFSGRIEEAIEVFFKIPN-FRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRL 177
Query: 238 DTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKK-----G 292
+ + G I CR+G + A E+ M++ V+ + L+ +C + G
Sbjct: 178 EESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIG 237
Query: 293 SVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRL 352
+E +R TR F+ GL T V M L
Sbjct: 238 YLEDLR--KTR---------------------------FSPGLRDYTVV----MRFLVEG 264
Query: 353 GQTEEAVKLLRIVE----ERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPK 408
G+ +E V +L ++ E L C Y IV++ + +A LF +L GL P
Sbjct: 265 GRGKEVVSVLNQMKCDRVEPDLVC----YTIVLQGVIADEDYPKADKLFDELLLLGLAPD 320
Query: 409 LGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLM 468
+ YN I+ LC +++ A+ + MNK P+ +TY LI A K + A L
Sbjct: 321 VYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWK 380
Query: 469 EMLGLGWIPELQTYNL-------VDNLLREHDRSDLCLKLERKLENHQLQ----KLCKLG 517
EM G T+++ VD ++ H + + +++ +++ +LC+ G
Sbjct: 381 EMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKG 440
Query: 518 QLDAAYE 524
+D A E
Sbjct: 441 LMDQAVE 447
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 150/379 (39%), Gaps = 45/379 (11%)
Query: 199 GCKPDNLVFNNVLYVLCKKQSSE--ETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLG 256
C+P + V+ L K E ++ L + K ++P++ + I + GR+
Sbjct: 67 NCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESI-FRDVIAAYGFSGRIE 125
Query: 257 AALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGN 316
A+E+F ++ +P+ +N L L L K+ S+E V
Sbjct: 126 EAIEVFFKIPNFRCVPSAYTLNAL---LLVLVRKRQSLELV------------------- 163
Query: 317 SGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEG 376
P + V L STF + L+ LCR+G+ + A +L+R + + +
Sbjct: 164 -----PEILVKACRMGVRLEESTFGI--LIDALCRIGEVDCATELVRYMSQDSVIVDPRL 216
Query: 377 YAIVMKALCDHCQVE--EASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFEL 434
Y+ ++ ++C H + + P L Y V+ L G + V
Sbjct: 217 YSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQ 276
Query: 435 MNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDR 494
M R PD + YT ++ +++ A L E+L LG P++ TYN+ N L + +
Sbjct: 277 MKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQND 336
Query: 495 SDLCLKLERKLE-----------NHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDT 543
+ LK+ + N ++ L K G L A K M G++ +++ D
Sbjct: 337 IEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDI 396
Query: 544 FEHVFQKNGKLKIARQLLE 562
+ + ++ A LLE
Sbjct: 397 MISAYIEVDEVVCAHGLLE 415
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 16/212 (7%)
Query: 162 QKGKVSP--KAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQS 219
+K + SP + ++ +RFL GR E +S+ +M+ +PD + + VL + +
Sbjct: 243 RKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCD-RVEPDLVCYTIVLQGVIADED 301
Query: 220 SEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNM 279
+ +L + +PD Y+ I G C+ + AL++ S MNK+G P N+
Sbjct: 302 YPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNI 361
Query: 280 LIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPST 339
LI L K G + + + + N I +EV V GLL
Sbjct: 362 LIKALV----KAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEA 417
Query: 340 F---VVVK------LMSELCRLGQTEEAVKLL 362
F V VK ++S LC G ++AV+LL
Sbjct: 418 FNMNVFVKSSRIEEVISRLCEKGLMDQAVELL 449
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 9/189 (4%)
Query: 328 WAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDH 387
W + S P L+ + Q +EA L + E + E+ YA+++KA C
Sbjct: 166 WILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMA 225
Query: 388 CQVEEASNLFGRMLACGLKPK---LGVYNSVI-SMLCTLGNLDHAMGVFELMNKKRCLPD 443
+E A + M + PK + VYN+ I ++ GN + A+ VF+ M + RC P
Sbjct: 226 GLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPT 285
Query: 444 NLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLER 503
TY +I+ +GK +++ L EM P + TY + N R LC K E
Sbjct: 286 TETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFA---REGLCEKAEE 342
Query: 504 KLENHQLQK 512
E QLQ+
Sbjct: 343 IFE--QLQE 349
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 131/322 (40%), Gaps = 8/322 (2%)
Query: 138 YMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETV 197
Y+ + R+ ++ + + + K + + ++ I G+ + + + L+ EM +
Sbjct: 256 YIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRS- 314
Query: 198 FGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGA 257
CKP+ + ++ ++ E+ E+ ++ PD Y + + R G
Sbjct: 315 HQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYG 374
Query: 258 ALEIFSQMNKIGVLPTRSAVNMLI---GELCSLSEKKGSVEKVR---VRNTRRPCTILVP 311
A EIFS M +G P R++ N+++ G S+ + E+++ + T + +L+
Sbjct: 375 AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLS 434
Query: 312 NMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLT 371
+ + + + +G+ P TFV+ +++ RLGQ + K+L +E T
Sbjct: 435 AY-SKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCT 493
Query: 372 CVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGV 431
Y I++ +E LF + +P + + S I + V
Sbjct: 494 ADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEV 553
Query: 432 FELMNKKRCLPDNLTYTALIHA 453
FE M C PD T L+ A
Sbjct: 554 FEEMIDSGCAPDGGTAKVLLSA 575
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 133/338 (39%), Gaps = 20/338 (5%)
Query: 156 LMTVASQKGKVSPKAMSICIR------FLGRHGRIHEALSLFEEMETVFGCKPDNLVFNN 209
++ V Q VSPK + + + + R G EA+ +F+ M+ CKP +N
Sbjct: 233 VVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRD-RCKPTTETYNL 291
Query: 210 VLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIG 269
++ + K S + +L + P+ + + F R G A EIF Q+ + G
Sbjct: 292 MINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 351
Query: 270 VLPTRSAVNMLIGELCSLSEKKGSVEKVRVRN------TRRPCTILVPNMGGNSGAIQPA 323
+ P N L+ G+ E + R I+V + G +G A
Sbjct: 352 LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMV-DAYGRAGLHSDA 410
Query: 324 VEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKA 383
VF + G+ P+ + L+S + + K IV+E VE ++
Sbjct: 411 EAVFEEMKRLGIAPTMKSHMLLLSAYSK---ARDVTKCEAIVKEMSENGVEPDTFVLNSM 467
Query: 384 LCDHC---QVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRC 440
L + Q + + M + YN +I++ G L+ +F + +K
Sbjct: 468 LNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNF 527
Query: 441 LPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPE 478
PD +T+T+ I A+ + K + ++ EM+ G P+
Sbjct: 528 RPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPD 565
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 97/245 (39%), Gaps = 9/245 (3%)
Query: 251 RLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPC---- 306
R G A+++F +M + PT N++I L + K K+ C
Sbjct: 263 RKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN-LYGKASKSYMSWKLYCEMRSHQCKPNI 321
Query: 307 ---TILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLR 363
T LV N G + A E+F + GL P +V LM R G A ++
Sbjct: 322 CTYTALV-NAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFS 380
Query: 364 IVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLG 423
+++ Y I++ A +A +F M G+ P + + ++S
Sbjct: 381 LMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKAR 440
Query: 424 NLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN 483
++ + + M++ PD ++++ +G++ + +L EM ++ TYN
Sbjct: 441 DVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYN 500
Query: 484 LVDNL 488
++ N+
Sbjct: 501 ILINI 505
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 123/299 (41%), Gaps = 13/299 (4%)
Query: 201 KPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESP--DTYSCGNTIVGFCRLGRLGAA 258
+PD + FN ++ +K +E L +++ P DTY+ I +C G + A
Sbjct: 174 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYAL--LIKAYCMAGLIERA 231
Query: 259 LEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKV-----RVRNTR-RPCT---IL 309
+ +M V P V + + L ++KG+ E+ R++ R +P T L
Sbjct: 232 EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNL 291
Query: 310 VPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERK 369
+ N+ G + + +++ + + P+ L++ R G E+A ++ ++E
Sbjct: 292 MINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 351
Query: 370 LTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAM 429
L Y +M++ A+ +F M G +P YN ++ G A
Sbjct: 352 LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 411
Query: 430 GVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNL 488
VFE M + P ++ L+ A+ K ++ ++ EM G P+ N + NL
Sbjct: 412 AVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 470
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 171/426 (40%), Gaps = 26/426 (6%)
Query: 83 TAIDHVLDRYKGD--LSSNFVLRVLMSYQHLGRAKTLNFFSWA---GTQMGFQFDDSVVE 137
+A+D + + K + L + V R L+ LGR F W G + V
Sbjct: 99 SAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAF--WVLEEAFSTGQEIHPDVCN 156
Query: 138 YMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETV 197
+ L +D + L + + + ++ + I + R ++ L L +E+
Sbjct: 157 RLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEV--- 213
Query: 198 FGCKPDNLVFNN------VLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCR 251
K NL N +L+ LCK + + + + PD + F
Sbjct: 214 ---KKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVV 270
Query: 252 LGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCS---LSEKKGSVEKVRVRNTRRPCTI 308
G L + + K+GV P S I +L S L+E K V +V V
Sbjct: 271 TGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAK-EVAEVIVSGKFPMDND 329
Query: 309 LVPNMGGNSGAIQP--AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVE 366
++ + G+ A+ P AVE + ++G LP+ + KL LCR +++ +K ++
Sbjct: 330 ILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLS 389
Query: 367 ERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLD 426
+ + Y++++ LC +V E+ M GL P + +YN++I C +
Sbjct: 390 SKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIR 449
Query: 427 HAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTY-NLV 485
A +++ M + C + TY LI + + + L +ML G P+ Y +L+
Sbjct: 450 PAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLI 509
Query: 486 DNLLRE 491
+ L +E
Sbjct: 510 EGLCKE 515
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 28/242 (11%)
Query: 146 RKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEME---TVFGCK- 201
+++F+ +K + ++ K + +ICI G G + ALSLF+EM+ +V+G
Sbjct: 232 KRVFEKLKGM------KRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSF 285
Query: 202 -PDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALE 260
PD +N++++VLC +++ + + + PD + I G C+ R+ A+
Sbjct: 286 GPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMR 345
Query: 261 IFSQMNKIGVLPTRSAVNML---------IGELCSLSEKKGSVEKVRVRNTRRPCTILVP 311
I+ +M G +P N L + E C L EK + + VR + IL+
Sbjct: 346 IYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEK---MVQEGVRASCWTYNILID 402
Query: 312 NMGGNSGAIQPAVEVFWAVFNSGLLPS--TFVVVKLMSELCRLGQTEEAVKLLRIVEERK 369
+ N G + +F + G TF +V L +LCR G+ E AVKL+ +E R
Sbjct: 403 GLFRN-GRAEAGFTLFCDLKKKGQFVDAITFSIVGL--QLCREGKLEGAVKLVEEMETRG 459
Query: 370 LT 371
+
Sbjct: 460 FS 461
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 99/245 (40%), Gaps = 18/245 (7%)
Query: 336 LPSTFVVVKLMSELCRLGQTEEAVKLL-RIVEERKLTCVEEGYAIVMKALCDHCQVEEAS 394
LP T V +L+ L R E ++ ++ ++ Y I + ++ A
Sbjct: 209 LPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAAL 268
Query: 395 NLFGRM------LACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYT 448
+LF M P + YNS+I +LC G A+ V++ + PDN TY
Sbjct: 269 SLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYR 328
Query: 449 ALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN-LVDNLLREHDRSDLCLKLERKLE- 506
LI K A + EM G++P+ YN L+D L+ ++ C E+ ++
Sbjct: 329 ILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQE 388
Query: 507 ---------NHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIA 557
N + L + G+ +A + + +KG + A + GKL+ A
Sbjct: 389 GVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGA 448
Query: 558 RQLLE 562
+L+E
Sbjct: 449 VKLVE 453
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%)
Query: 356 EEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSV 415
+E K++R+++E + Y I+++ LC + EA L +++C ++P Y+ +
Sbjct: 234 DEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLL 293
Query: 416 ISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGW 475
I C+ NLD AM +FE+M PD+ Y LIH K +++ A L E + W
Sbjct: 294 IHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNW 353
Query: 476 IPELQTYNLVDNLLREHDRSD 496
+P + N L + D
Sbjct: 354 VPSFSVMKWLVNGLASRSKVD 374
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 93/219 (42%), Gaps = 7/219 (3%)
Query: 186 EALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNT 245
EA ++ EM ++G +PD +N ++ VLC+ S+ + + + K P S G
Sbjct: 164 EANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLM 223
Query: 246 IVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSL---SEKKGSVEKV---RV 299
I GF + + ++ M++ GV + N++I LC +E K ++ V R+
Sbjct: 224 IDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRM 283
Query: 300 RNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAV 359
R ++L+ + A+ +F + +G P + L+ LC+ G E A+
Sbjct: 284 RPNSVTYSLLIHGFCSEEN-LDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETAL 342
Query: 360 KLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFG 398
L R E+ ++ L +V+EA L
Sbjct: 343 ILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIA 381
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 134/317 (42%), Gaps = 47/317 (14%)
Query: 166 VSPKAMSI--------CIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNV--LYVLC 215
V P A++I C++ + + +H + G D LV N++ +Y C
Sbjct: 348 VVPNAVTIMSAVSACSCLKVINQGSEVHS-------IAVKMGFIDDVLVGNSLVDMYSKC 400
Query: 216 KKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRS 275
K +E A ++F +++ D Y+ + I G+C+ G G A E+F++M + P
Sbjct: 401 GK------LEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNII 454
Query: 276 AVNMLI---------GELCSL---SEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPA 323
N +I GE L EK G V+ RNT I+ + +G A
Sbjct: 455 TWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQ----RNTATWNLIIAGYI--QNGKKDEA 508
Query: 324 VEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKA 383
+E+F + S +P++ ++ L+ L + ++ V R L + V A
Sbjct: 509 LELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHA----VKNA 564
Query: 384 LCDHCQVEEASNLFGRMLACGLKPK-LGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLP 442
L D + + R + G++ K + +NS+I G+ A+ +F M + P
Sbjct: 565 LTD-TYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITP 623
Query: 443 DNLTYTALIHAHGKVKN 459
+ T +++I AHG + N
Sbjct: 624 NRGTLSSIILAHGLMGN 640
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 121/308 (39%), Gaps = 30/308 (9%)
Query: 170 AMSICIRF-------LGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEE 222
MS C+R + G + A F M + D + +N+VL C+ EE
Sbjct: 211 GMSSCLRVSNSILAVYAKCGELDFATKFFRRMR-----ERDVIAWNSVLLAYCQNGKHEE 265
Query: 223 TIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIG 282
+EL + + SP + I G+ +LG+ AA+++ +M G+ +I
Sbjct: 266 AVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMIS 325
Query: 283 ELCSLSEKKGSVEKVRVRNTRRPCTILVPN----MGGNSG-----AIQPAVEVFWAVFNS 333
L + +++ R + +VPN M S I EV
Sbjct: 326 GLIHNGMRYQALDMFR----KMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKM 381
Query: 334 GLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEA 393
G + V L+ + G+ E+A K+ V+ + + + ++ C +A
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYT----WNSMITGYCQAGYCGKA 437
Query: 394 SNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHA 453
LF RM L+P + +N++IS G+ AM +F+ M K + N LI A
Sbjct: 438 YELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIA 497
Query: 454 HGKVKNWK 461
G ++N K
Sbjct: 498 -GYIQNGK 504
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 136/314 (43%), Gaps = 28/314 (8%)
Query: 206 VFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQM 265
V N++L V K ++ A + F +M D + + ++ +C+ G+ A+E+ +M
Sbjct: 218 VSNSILAVYAKCGE----LDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEM 273
Query: 266 NKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQ---- 321
K G+ P N+LIG L + +++ ++ T + SG I
Sbjct: 274 EKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMR 333
Query: 322 -PAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGY--- 377
A+++F +F +G++P+ ++ +S +K++ E V+ G+
Sbjct: 334 YQALDMFRKMFLAGVVPNAVTIMSAVSAC-------SCLKVINQGSEVHSIAVKMGFIDD 386
Query: 378 AIVMKALCD---HC-QVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFE 433
+V +L D C ++E+A +F + + +NS+I+ C G A +F
Sbjct: 387 VLVGNSLVDMYSKCGKLEDARKVFDSV----KNKDVYTWNSMITGYCQAGYCGKAYELFT 442
Query: 434 LMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIP-ELQTYNLVDNLLREH 492
M P+ +T+ +I + K + A DL M G + T+NL+ ++
Sbjct: 443 RMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQN 502
Query: 493 DRSDLCLKLERKLE 506
+ D L+L RK++
Sbjct: 503 GKKDEALELFRKMQ 516
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 96/230 (41%), Gaps = 15/230 (6%)
Query: 318 GAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGY 377
G ++ A +F G P + L++ L G+ EA + R E+ + GY
Sbjct: 718 GWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGY 777
Query: 378 AIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNK 437
++KA+ + +++ AS ++ RM G+ + YN++IS+ LD A+ +F +
Sbjct: 778 NTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARR 837
Query: 438 KRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNL------------- 484
D YT +I +GK A L EM G P +YN+
Sbjct: 838 SGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHE 897
Query: 485 VDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGI 534
VD LL+ +R+ C L L +Q + Q A + + EKGI
Sbjct: 898 VDELLQAMERNGRCTDLSTYLT--LIQVYAESSQFAEAEKTITLVKEKGI 945
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 129/329 (39%), Gaps = 77/329 (23%)
Query: 145 RRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDN 204
RR+ DDM+ ++ + + K+S + M C+ + G + F M+ +P
Sbjct: 135 RRQGSDDMRFVMSSFVA---KLSFRDM--CVVLKEQRG-WRQVRDFFSWMKLQLSYRPSV 188
Query: 205 LVFNNVLYV---LCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEI 261
+V+ VL + + K + +EET L + PD +CG + + R GR A L
Sbjct: 189 VVYTIVLRLYGQVGKIKMAEETF---LEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTF 245
Query: 262 FSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQ 321
+ + + +L + S N ++ L +KK KV
Sbjct: 246 YKAVQERRILLSTSVYNFMLSSL----QKKSFHGKV------------------------ 277
Query: 322 PAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVM 381
++++ + G+ P+ F ++S + G EEA+K
Sbjct: 278 --IDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALK--------------------- 314
Query: 382 KALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCL 441
FG M + G P+ Y+SVIS+ G+ + A+G++E M + +
Sbjct: 315 --------------AFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIV 360
Query: 442 PDNLTYTALIHAHGKVKNWKVAYDLLMEM 470
P N T ++ + K +N+ A L +M
Sbjct: 361 PSNYTCATMLSLYYKTENYPKALSLFADM 389
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 74/177 (41%), Gaps = 3/177 (1%)
Query: 304 RPCTI---LVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVK 360
RP + +V + G G I+ A E F + G P ++ R G+ +
Sbjct: 185 RPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLT 244
Query: 361 LLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLC 420
+ V+ER++ Y ++ +L + +L+ M+ G+ P Y V+S
Sbjct: 245 FYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYA 304
Query: 421 TLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIP 477
G + A+ F M +P+ +TY+++I K +W+ A L +M G +P
Sbjct: 305 KQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVP 361
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 139/363 (38%), Gaps = 17/363 (4%)
Query: 92 YKGDLSSNFVLRVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDD 151
+K DL S+ V RV+ S+ G + ++G + ++ + + GR+ +
Sbjct: 629 FKTDLGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKE 688
Query: 152 MKCLLMTVASQK--GKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNN 209
K L + K GK ++M I R G + +A LF E GC P + +
Sbjct: 689 AKRLYLAAGESKTPGKSVIRSM---IDAYVRCGWLEDAYGLFME-SAEKGCDPGAVTISI 744
Query: 210 VLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIG 269
++ L + E ++ K DT I G+L A EI+ +M+ G
Sbjct: 745 LVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSG 804
Query: 270 VLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTIL----VPNM---GGNSGAIQP 322
V + N +I + ++E N RR L NM G G +
Sbjct: 805 VPCSIQTYNTMISVYGRGLQLDKAIEI--FSNARRSGLYLDEKIYTNMIMHYGKGGKMSE 862
Query: 323 AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVE-EGYAIVM 381
A+ +F + G+ P T +M ++C + V L ER C + Y ++
Sbjct: 863 ALSLFSEMQKKGIKPGT-PSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLI 921
Query: 382 KALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCL 441
+ + Q EA + G+ ++S++S L G ++ A + M++
Sbjct: 922 QVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGIS 981
Query: 442 PDN 444
PD+
Sbjct: 982 PDS 984
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 325 EVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKAL 384
E+F + G T VK+ L + G+T EA++L ++++ + +++A
Sbjct: 186 EIFHKMRTEGF---TNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAY 242
Query: 385 CDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNL--DHAMGVFELMNKKRCLP 442
+ Q +E +F RMLA G+ P Y+ +I L G D + E+M P
Sbjct: 243 ANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMS-P 301
Query: 443 DNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPE 478
+ TYTA+ A + + A +LL EM G G++P+
Sbjct: 302 NAATYTAVFEAFVREGKEESARELLQEMKGKGFVPD 337
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 11/224 (4%)
Query: 318 GAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGY 377
G + A+EVF + + P T LM++LC EA KL +EE+ + E Y
Sbjct: 364 GKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTY 423
Query: 378 AIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNK 437
++M +++E + + M+ L+P L VYN + L G LD A F++M
Sbjct: 424 GLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVS 483
Query: 438 KRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWI---PELQTYNLVDNLLREHDR 494
K + D+ Y ++ A + ++ EML + ELQ + V LR+ R
Sbjct: 484 KLKM-DDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEF--VKEELRKGGR 540
Query: 495 SDLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSA 538
KL E +L+ K +L A EK K+ + I+++A
Sbjct: 541 EGDLEKLME--EKERLKAEAKAKELADAEEKKKA---QSINIAA 579
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 121/312 (38%), Gaps = 46/312 (14%)
Query: 104 VLMSYQHLGRAKT------LNFFSWAGTQMGFQFDDSVV--EYMADFLGRRKLFDDMKCL 155
V+ SY +G K L + ++G DD VV + M + + + M+C
Sbjct: 237 VVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECY 296
Query: 156 LMTVA-SQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFN-NVLYV 213
V + K ++S A + + L +G+ EAL LF+ ++ P +L N V
Sbjct: 297 EEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHN-PPRHLAVNLGTFNV 355
Query: 214 LCKKQSSEETIELALRIFHKME----SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIG 269
+ + E A+ +F +M SPDT S N + C L A +++ +M +
Sbjct: 356 MVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKN 415
Query: 270 VLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWA 329
V P +L+ + C G I +
Sbjct: 416 VKPDEYTYGLLM-DTCF-----------------------------KEGKIDEGAAYYKT 445
Query: 330 VFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQ 389
+ S L P+ V +L +L + G+ ++A ++ KL +E Y +M+AL + +
Sbjct: 446 MVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMM-VSKLKMDDEAYKFIMRALSEAGR 504
Query: 390 VEEASNLFGRML 401
++E + ML
Sbjct: 505 LDEMLKIVDEML 516
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 5/149 (3%)
Query: 337 PSTFVVVKLMSELCR---LGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEA 393
P T+ L+ LC+ L E V +R + K V + I++ +C+ + EA
Sbjct: 192 PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLV--SFTILIDNVCNSKNLREA 249
Query: 394 SNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHA 453
L ++ G KP +YN+++ CTL A+GV++ M ++ PD +TY LI
Sbjct: 250 MYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFG 309
Query: 454 HGKVKNWKVAYDLLMEMLGLGWIPELQTY 482
K + A L M+ G+ P+ TY
Sbjct: 310 LSKAGRVEEARMYLKTMVDAGYEPDTATY 338
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 88/226 (38%), Gaps = 31/226 (13%)
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAA 258
G +PD + + + LC+ +E +L + K PDTY+ + C+ L
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVV 213
Query: 259 LEIFSQM-NKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNS 317
E +M + V P + +LI +C NS
Sbjct: 214 YEFVDEMRDDFDVKPDLVSFTILIDNVC------------------------------NS 243
Query: 318 GAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGY 377
++ A+ + + N+G P F+ +M C L + EAV + + ++E + + Y
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 378 AIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLG 423
++ L +VEEA M+ G +P Y S+++ +C G
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 79/204 (38%), Gaps = 30/204 (14%)
Query: 150 DDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNN 209
D+ K L+ + + + ++ L + +H +EM F KPD + F
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 210 VLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIG 269
++ +C ++ E + L ++ + PD + + GFC L + A+ ++ +M + G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 270 VLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWA 329
V P + N LI L K G VE+ R+
Sbjct: 296 VEPDQITYNTLIFGL----SKAGRVEEARM--------------------------YLKT 325
Query: 330 VFNSGLLPSTFVVVKLMSELCRLG 353
+ ++G P T LM+ +CR G
Sbjct: 326 MVDAGYEPDTATYTSLMNGMCRKG 349
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 118/275 (42%), Gaps = 26/275 (9%)
Query: 117 LNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIR 176
+ F+WA Q F ++ LG K++ +M ++ V S + + + I
Sbjct: 156 FHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIF 215
Query: 177 FLGRHGRIHEALSLFEEMETV--FGCKPDNLVFNNVLYVLCKKQSSEET----IELALRI 230
+ + G++ A+++F M T C+P ++ + L + ++ +E +
Sbjct: 216 YFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSL 275
Query: 231 FHKMES----PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKI-GVLPTRSAVNMLIGELC 285
F +M PD ++ + G+ + AL IF QM+ + P + LI LC
Sbjct: 276 FRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLC 335
Query: 286 S----------LSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGL 335
+ LSE KG K V N + +++ N SG I AV+ W + +G
Sbjct: 336 AQGRTINARELLSEMKG---KGFVPNGKSYNSLV--NAFALSGEIDDAVKCLWEMIENGR 390
Query: 336 LPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKL 370
+ L+ E CR G+ +EA +LL ++ E++L
Sbjct: 391 VVDFISYRTLVDESCRKGKYDEATRLLEMLREKQL 425
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 33/223 (14%)
Query: 349 LCRLGQTEEAVKLLR-IVEERKLTC--VEEGYAIVMKAL--------CDHCQVEEASNLF 397
+ G+ AV + R +V + L C Y I+ KAL +H +E +LF
Sbjct: 217 FTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLF 276
Query: 398 GRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNK-KRCLPDNLTYTALIH---A 453
+M+ G++P + N ++ +++ A+ +F M+ C P++ TY LIH A
Sbjct: 277 RQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCA 336
Query: 454 HGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLK-LERKLENHQ--- 509
G+ N A +LL EM G G++P ++YN + N D +K L +EN +
Sbjct: 337 QGRTIN---ARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVD 393
Query: 510 -------LQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFE 545
+ + C+ G+ D A + + EK + RD+++
Sbjct: 394 FISYRTLVDESCRKGKYDEATRLLEMLREKQL----VDRDSYD 432
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 9/177 (5%)
Query: 324 VEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKA 383
+E+F + GL+ +T L+ L + G + A ++ + + + Y I++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 384 LCDHCQ---------VEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFEL 434
LC + + VE+ +LF + G+KP + Y ++IS C G + A +F
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 435 MNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLRE 491
M + LPD+ TY LI AH + + + +L+ EM + + TY LV ++L +
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHD 177
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 152/389 (39%), Gaps = 49/389 (12%)
Query: 96 LSSNFVLRVL--MSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMK 153
LS + + RVL + + H +TL F+ +A GF ++ M LGR + FD +
Sbjct: 69 LSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIW 128
Query: 154 CLLM-TVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKP------DNLV 206
LL+ T + +SP+ M + + GR+ + S+ + +E+ + K D
Sbjct: 129 ELLIETKRKDRSLISPRTMQVVL------GRVAKLCSVRQTVESFWKFKRLVPDFFDTAC 182
Query: 207 FNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMN 266
FN +L LC+++S + + + H+ + PD + + G+ A F +M
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSLKHQFQ-PDLQTFNILLSGW---KSSEEAEAFFEEMK 238
Query: 267 KIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEV 326
G+ P N LI C E I+ A ++
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDRE------------------------------IEKAYKL 268
Query: 327 FWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCD 386
+ P ++ L +GQ ++A ++L+ ++E Y ++ C
Sbjct: 269 IDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCI 328
Query: 387 HCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLT 446
++ +A L M+ GL P YN +L +L + ++ M CLP+ +
Sbjct: 329 ARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQS 388
Query: 447 YTALIHAHGKVKNWKVAYDLLMEMLGLGW 475
LI + + +A L +M+ G+
Sbjct: 389 CMFLIKMFKRHEKVDMAMRLWEDMVVKGF 417
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%)
Query: 334 GLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEA 393
GL P L+ C+ + E+A KL+ + E + T Y V+ L Q ++A
Sbjct: 241 GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKA 300
Query: 394 SNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHA 453
+ M G P + YN+ I C L A + + M KK P+ TY
Sbjct: 301 REVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRV 360
Query: 454 HGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKL 501
+ +++L + MLG +P Q+ + + + H++ D+ ++L
Sbjct: 361 LSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRL 408
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 105/500 (21%), Positives = 194/500 (38%), Gaps = 46/500 (9%)
Query: 103 RVLMSYQHLGRAKTLNFFSWAGTQMGFQFDDSVVEY--MADFLGRRKLFDDMKCLLMTVA 160
R ++ + + + + F W ++ ++ + V+ Y M LG+ + ++ L +
Sbjct: 157 RTIILKEQIHWERAVEIFEWFKSKGCYELN--VIHYNIMLRILGKACKWRYVQSLWDEMI 214
Query: 161 SQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSS 220
+ K I + G AL +M + G +PD + VL + K +
Sbjct: 215 RKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKI-GMQPDEVTTGIVLQMYKKAREF 273
Query: 221 EETIELALRIFHKMESPDTYSC-----GNTIVG-FCRLGRLGAALEIFSQMNKIGVLPTR 274
++ E + D++ C NT++ + + G++ A E F +M + G++PT
Sbjct: 274 QKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTT 333
Query: 275 SAVNMLI---------GELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVE 325
N +I GE+ SL + K+ R IL+ ++ + I+ A
Sbjct: 334 VTFNTMIHIYGNNGQLGEVTSLMK----TMKLHCAPDTRTYNILI-SLHTKNNDIERAGA 388
Query: 326 VFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALC 385
F + + GL P L+ EEA L+ +++ + E + + +
Sbjct: 389 YFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYV 448
Query: 386 DHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVF---ELMNKKRCLP 442
+ +E++ + F R G G Y++ I G L A VF + +NK+ +
Sbjct: 449 EAEMLEKSWSWFKRFHVAGNMSSEG-YSANIDAYGERGYLSEAERVFICCQEVNKRTVIE 507
Query: 443 DNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHD--RSDLCLK 500
Y +I A+G K+ + A +L M+ G P+ TYN + +L D C
Sbjct: 508 ----YNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCY- 562
Query: 501 LERKLENHQ----------LQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQK 550
LE+ E + KLGQL+ A E K M+E I + F
Sbjct: 563 LEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFAD 622
Query: 551 NGKLKIARQLLETTRRVQEP 570
G ++ A +E + P
Sbjct: 623 TGNVQQAMSYVEAMKEAGIP 642
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 160/408 (39%), Gaps = 23/408 (5%)
Query: 169 KAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELAL 228
+ +I I ++ I A + F+EM+ G KPD + + +LY + EE L
Sbjct: 368 RTYNILISLHTKNNDIERAGAYFKEMKDD-GLKPDPVSYRTLLYAFSIRHMVEEAEGLIA 426
Query: 229 RIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTR--SAVNMLIGELCS 286
+ D Y+ + L + F + + G + + SA GE
Sbjct: 427 EMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGY 486
Query: 287 LSEKKGSVEKVRVRNTRRPCTILVPNM----GGNSGAIQPAVEVFWAVFNSGLLPSTFVV 342
LSE + + N R T++ N+ G S + + A E+F ++ + G+ P
Sbjct: 487 LSEAERVFICCQEVNKR---TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTY 543
Query: 343 VKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLA 402
L+ L + L + E Y V+ + Q+ A ++ M+
Sbjct: 544 NTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVE 603
Query: 403 CGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKV---KN 459
++P + VY +I+ GN+ AM E M + +++ Y +LI + KV
Sbjct: 604 YNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDE 663
Query: 460 WKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHD----RSDLCLKLERKLENHQLQ---K 512
+ Y L++ P++ T N + NL E + ++++ E ++
Sbjct: 664 AEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMM 723
Query: 513 LC---KLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLKIA 557
LC K G+ + A + AK M E I + ++ +F +G+ K A
Sbjct: 724 LCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEA 771
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/344 (20%), Positives = 147/344 (42%), Gaps = 40/344 (11%)
Query: 187 ALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRI--FHKMESPDTYSCGN 244
A+ F+ M + + ++ +L VL +++ + +L + FH+ + +Y N
Sbjct: 157 AIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQK--SYQVFN 214
Query: 245 TIVGFC-RLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTR 303
T++ C + G + A + F M + GV P + + ML+G L +K +VE+
Sbjct: 215 TVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMG----LYQKNWNVEEAEF---- 266
Query: 304 RPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLR 363
F + G++ + +++ RL ++A +++
Sbjct: 267 ----------------------AFSHMRKFGIVCES-AYSSMITIYTRLRLYDKAEEVID 303
Query: 364 IVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLG 423
++++ ++ E + +++ A ++E A ++ M A G P + YN++I+ +
Sbjct: 304 LMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIF 363
Query: 424 NLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN 483
++ A G+F + PD +Y ++I G+ N++ A E+ G+ P ++N
Sbjct: 364 KMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKP--NSFN 421
Query: 484 LVD--NLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEK 525
L NL ++ D +K + Q LG + AYEK
Sbjct: 422 LFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEK 465
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 132/351 (37%), Gaps = 43/351 (12%)
Query: 149 FDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFN 208
F + + L + + S + SI +R + G + EA S+ E M+ PD +F
Sbjct: 574 FSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFR 633
Query: 209 NVL--YVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFC-RLGRLGAALEIFSQM 265
++L Y C Q + + +R + + Y+C ++ C R L F +M
Sbjct: 634 DMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNC---VINCCARALPLDELSGTFEEM 690
Query: 266 NKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVE 325
+ G P N+L+ ++ G + + E
Sbjct: 691 IRYGFTPNTVTFNVLL------------------------------DVYGKAKLFKKVNE 720
Query: 326 VFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVE---EGYAIVMK 382
+F G++ V+ + + G+ ++ + ++ + E Y ++
Sbjct: 721 LFLLAKRHGVVD----VISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLD 776
Query: 383 ALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLP 442
A Q+E+ ++ RM P YN +I++ G +D V + + + P
Sbjct: 777 AYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGP 836
Query: 443 DNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHD 493
D +Y LI A+G + A L+ EM G IP+ TY + LR +D
Sbjct: 837 DLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRND 887
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 162/391 (41%), Gaps = 25/391 (6%)
Query: 145 RRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDN 204
R + F CLL S K ++ A ++ + + +F+ ++ G +P
Sbjct: 151 RDRKFRITHCLLSVFRSDKS-LAVSASDAAMKGFNKLQMYSSTIQVFDRLKQSVGVEPSP 209
Query: 205 LVFNNVLYVLCKKQSSEETIELALRI------FHKMESPDTYSCGNTIV--GFCRLGRLG 256
+ ++ K + + +EL F ES Y TIV + GR
Sbjct: 210 GCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIY----TIVCSSLAKSGRAF 265
Query: 257 AALEIFSQMNKIGVLPTRSAVNMLIGELCSLSE----KKGSVEKVRVRNTRRPCTIL-VP 311
ALE+ +M G+ + +MLI E +K E + + P L V
Sbjct: 266 EALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVV 325
Query: 312 NMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLT 371
M G ++ +EV A+ + L + ++ +++ + EAVK+ + +
Sbjct: 326 LMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECE 385
Query: 372 CVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGV 431
+ YAI + A C + +A LF M+ G + Y++++ M L A+ +
Sbjct: 386 AGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRL 445
Query: 432 FELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLRE 491
M ++ C P+ Y +LI HG+ + + A + EM +P+ +Y +++
Sbjct: 446 MAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYT---SMISA 502
Query: 492 HDRSDLCLKLERKLENHQLQKLCKLGQLDAA 522
++RS +LER +E +Q ++ + G++D A
Sbjct: 503 YNRSK---ELERCVELYQEFRMNR-GKIDRA 529
>AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891360
REVERSE LENGTH=849
Length = 849
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 149/373 (39%), Gaps = 51/373 (13%)
Query: 120 FSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICI---- 175
+ W Q ++FD + +A++LG+ + F + + V +Q S I +
Sbjct: 225 YRWMTQQNWYRFDFGLTTKLAEYLGKERKFTKCREVFDDVLNQGRVPSESTFHILVVAYL 284
Query: 176 RFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSS--EETIELALRIFHK 233
L G + EA S++ M + G KP + N++ L KQ + ++ A IFH
Sbjct: 285 SSLSVEGCLEEACSVYNRMIQLGGYKPRLSLHNSLFRALVSKQGGILNDQLKQAEFIFHN 344
Query: 234 MES------PDTYSCGNTIVGFCR----LGRLGAALEIFSQMNKIGVLPTRSAVNMLIGE 283
+ + D YS G + C+ +GR+ + E +M K G ++ V L+
Sbjct: 345 VVTTGLEVQKDIYS-GLIWLHSCQDEVDIGRINSLRE---EMKKAGFQESKEVVVSLLRA 400
Query: 284 LCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVV 343
K+G VE+V R +L + G +PS V
Sbjct: 401 YA----KEGGVEEVE----RTWLELLDLDCG---------------------IPSQAFVY 431
Query: 344 KLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLAC 403
K+ + ++G +A+++ R +E+ GY +++ LC QVE L
Sbjct: 432 KIEA-YSKVGDFAKAMEIFREMEKHIGGATMSGYHKIIEVLCKVQQVELVETLMKEFEES 490
Query: 404 GLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVA 463
G KP L + + M LG L + + + ++C P Y + + K+ N + A
Sbjct: 491 GKKPLLPSFIEIAKMYFDLG-LHEKLEMAFVQCLEKCQPSQPIYNIYLDSLTKIGNLEKA 549
Query: 464 YDLLMEMLGLGWI 476
D+ EM G I
Sbjct: 550 GDVFNEMKNNGTI 562
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 39/202 (19%)
Query: 184 IHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM----ESPDT 239
+H SL ++M++ G PD V N ++ K +E A+R+F +M P+
Sbjct: 204 LHAVRSLTKQMKSN-GVIPDTFVLNMIIKAYAKCLEVDE----AIRVFKEMALYGSEPNA 258
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRV 299
Y+ + G C GR+G L + +M G++P S +LI CSLS ++
Sbjct: 259 YTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLI---CSLSMER-------- 307
Query: 300 RNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAV 359
+ AVEV + + + L P +++ELCR G+ EA+
Sbjct: 308 -------------------RLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEAL 348
Query: 360 KLLRIVEERKLTCVEEGYAIVM 381
+++ ++R E Y +M
Sbjct: 349 EMVEEWKKRDPVMGERNYRTLM 370
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 23/258 (8%)
Query: 204 NLVFNNVL---YVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALE 260
NL+ +N L Y CK+ LA R F M+ D S +VGF RLG + AA
Sbjct: 268 NLILSNALLDMYFKCKESG------LAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQA 321
Query: 261 IFSQMNKIGVLPTRSAVNMLIGELCS------LSEKKGSVEKVRVRNTRRPCTILVPNMG 314
+F QM K ++ S + + C L + VEKV+ R + + +
Sbjct: 322 VFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVK---PDRVTMVSLISGA 378
Query: 315 GNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVE 374
N+G + V V L F+ L+ C+ G E A + + E+ +
Sbjct: 379 ANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVAL-- 436
Query: 375 EGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFEL 434
+ ++ L H ++A LFGRM G+ P +V++ G ++ + VF
Sbjct: 437 --WTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNH 494
Query: 435 MNKKRCL-PDNLTYTALI 451
M K P+ Y +L+
Sbjct: 495 MKDKFGFDPETEHYGSLV 512
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 57/107 (53%)
Query: 377 YAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMN 436
Y ++ C +V++A + M + G P + ++++I+ C +D+ M +F M+
Sbjct: 13 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 72
Query: 437 KKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN 483
++ + + +TYT LIH +V + A DLL EM+ G P+ T++
Sbjct: 73 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFH 119
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 180 RHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDT 239
+ R+ +A + + M + GC PD + F+ ++ CK + + +E+ + + +T
Sbjct: 22 KQDRVDDAKRMLDSMASK-GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 80
Query: 240 YSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSE 289
+ I GFC++G L AA ++ ++M GV P + ++ LCS E
Sbjct: 81 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 130
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 140/323 (43%), Gaps = 26/323 (8%)
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAA 258
G + D V + ++ V K E+ AL +F +M + D + I GF + R A
Sbjct: 189 GLESDVFVRSALIDVFAKLGEPED----ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVA 244
Query: 259 LEIFSQMNKIGVLPTRSAVNMLIGELCSLS----EKKGSVEKVRVRNTRRPCTILVPNMG 314
LE+F +M + G + ++ + ++ L+ + V V+ LV +M
Sbjct: 245 LELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALV-DMY 303
Query: 315 GNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVE 374
G+++ A+ VFN ++S L + G ++EA+KL E K + +
Sbjct: 304 CKCGSLEDALR----VFNQMKERDVITWSTMISGLAQNGYSQEALKLF---ERMKSSGTK 356
Query: 375 EGYAIVMKAL--CDHCQVEEASNLFGRMLA--CGLKPKLGVYNSVISMLCTLGNLDHAMG 430
Y ++ L C H + E + R + G+ P Y +I +L G LD A+
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAV- 415
Query: 431 VFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPE-LQTYNLVDNLL 489
+L+N+ C PD +T+ L+ A +N +A +++ L PE TY L+ N+
Sbjct: 416 --KLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALD--PEDAGTYTLLSNIY 471
Query: 490 REHDRSDLCLKLERKLENHQLQK 512
+ D ++ ++ + ++K
Sbjct: 472 ANSQKWDSVEEIRTRMRDRGIKK 494
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 116/244 (47%), Gaps = 24/244 (9%)
Query: 224 IELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGE 283
++ A +F M + S + G R+G +E F +M +G+ P+ + +I
Sbjct: 8 VKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPS----SFVIAS 63
Query: 284 LCSLSEKKGSV--EKVRVRNTRRPCTIL--------VPNMGGNSGAIQPAVEVFWAVFNS 333
L + + GS+ E V+V +L + ++ G G + + +VF + +
Sbjct: 64 LVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR 123
Query: 334 GLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEE- 392
++ T LM G+ EE + + + + + C E ++V+ + C + E
Sbjct: 124 NVVSWT----SLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISS-CGLLKDESL 178
Query: 393 ASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIH 452
+ G+++ GL+ KL V NS+ISML ++GN+D+A +F+ M+++ D +++ ++
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSER----DTISWNSIAA 234
Query: 453 AHGK 456
A+ +
Sbjct: 235 AYAQ 238
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 18/253 (7%)
Query: 186 EALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKME-----SPDTY 240
+ +S+ E + + KP+ FN+++ + E E+ RI+ +ME SP+ Y
Sbjct: 227 DDVSVDEAKKMIGKIKPNATTFNSMMVSFYR----EGETEMVERIWREMEEEVGCSPNVY 282
Query: 241 SCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVR 300
S + +C G + A +++ +M GV+ A N +IG LCS E + E R
Sbjct: 283 SYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDM 342
Query: 301 NTRR-PCTIL----VPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELC--RLG 353
+ CT L + N +G + + V+ + G + L+ LC R G
Sbjct: 343 GLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDG 402
Query: 354 Q-TEEAVKLLR-IVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGV 411
Q EA +++ V E Y +++K LC+ +++ A N+ M+ G KP
Sbjct: 403 QRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQET 462
Query: 412 YNSVISMLCTLGN 424
Y + I +G+
Sbjct: 463 YRAFIDGYGIVGD 475
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 167/405 (41%), Gaps = 62/405 (15%)
Query: 172 SICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIF 231
++ ++ + + ++ LF+EM G KPDN F + + C +Q+ + A+ F
Sbjct: 179 NVTMKVFRKSKDLEKSEKLFDEM-LERGIKPDNATFTTI--ISCARQNG--VPKRAVEWF 233
Query: 232 HKMES----PDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSL 287
KM S PD + I + R G + AL ++
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYD------------------------ 269
Query: 288 SEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMS 347
+ EK R+ I + + GN E A+ G+ P+ + +L+
Sbjct: 270 ---RARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKAL---GVKPNLVIYNRLID 323
Query: 348 ELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKP 407
+ R + +A + + + T YA +++A ++A ++ M GL
Sbjct: 324 SMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSL 383
Query: 408 KLGVYNSVISMLCTLGNLDHAMGVFELM-NKKRCLPDNLTYTALIHAH---GKVKNWKVA 463
+ +YN+++SM +D A +F+ M N + C PD+ T+++LI + G+V + A
Sbjct: 384 TVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAA 443
Query: 464 YDLLMEMLGLGWIPEL-------QTYN---LVDNLLREHDRS-DLCLKLERKLENHQLQK 512
L++M G+ P L Q Y VD+++R D+ +L + + + L
Sbjct: 444 ---LLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNV 500
Query: 513 LCK-----LGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNG 552
+ + +G+L EKAK L + + + ++ E VF+K
Sbjct: 501 MTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFKKEA 545
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%)
Query: 377 YAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMN 436
Y + MK +E++ LF ML G+KP + ++IS G A+ FE M+
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 437 KKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSD 496
C PDN+T A+I A+G+ N +A L W + T++ + + D
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 497 LCLKLERKLE 506
CL + +++
Sbjct: 298 GCLNIYEEMK 307
>AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8183594-8185180 REVERSE
LENGTH=501
Length = 501
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 6/175 (3%)
Query: 340 FVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGR 399
+ V++ + + RL + + +E +++ E Y +++ LC+ + EA F
Sbjct: 99 WAVIRFLRQSSRLHEILPVFDTWKNLEPSRIS--ENNYERIIRFLCEEKSMSEAIRAFRS 156
Query: 400 MLA-CGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVK 458
M+ L P L +YNS+I G + AM M + LP TY LI A+GK K
Sbjct: 157 MIDDHELSPSLEIYNSIIHSYADDGKFEEAMFYLNHMKENGLLPITETYDGLIEAYGKWK 216
Query: 459 NWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKL 513
+ L M G + + TYNL L+RE R L ++E+ ++ +K+
Sbjct: 217 MYDEIVLCLKRMESDGCVRDHVTYNL---LIREFSRGGLLKRMEQMYQSLMSRKM 268
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 93/197 (47%), Gaps = 14/197 (7%)
Query: 342 VVKLMSELCRLGQTEEAVKLLRIVEERKLTCVE---EGYAIVMKALCDHCQVEEASNLFG 398
V++ + E + + + A+K+ ++ RK E + Y + K L + Q ++AS LF
Sbjct: 111 VLEALDEAIKENRWQSALKIFNLL--RKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFE 168
Query: 399 RMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNK-KRCLPDNLTYTALIHAHGKV 457
ML+ GLKP + VY S+IS+ LD A E M C PD T+T LI K+
Sbjct: 169 VMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKL 228
Query: 458 KNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKL-----ENHQLQK 512
+ + +++EM LG TYN ++ + ++ + ++E L + L
Sbjct: 229 GRFDLVKSIVLEMSYLGVGCSTVTYN---TIIDGYGKAGMFEEMESVLADMIEDGDSLPD 285
Query: 513 LCKLGQLDAAYEKAKSM 529
+C L + +Y ++M
Sbjct: 286 VCTLNSIIGSYGNGRNM 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/372 (19%), Positives = 143/372 (38%), Gaps = 33/372 (8%)
Query: 143 LGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKP 202
LG K D L + S+ K + + I G+ + +A S E M++V CKP
Sbjct: 154 LGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKP 213
Query: 203 DNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIF 262
D F ++ CK + + L + + T + I G+ + G +
Sbjct: 214 DVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVL 273
Query: 263 SQMNKIG-VLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQ 321
+ M + G LP +N +IG S G RN R+
Sbjct: 274 ADMIEDGDSLPDVCTLNSIIG-----SYGNG-------RNMRK----------------- 304
Query: 322 PAVEVFWAVFN-SGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIV 380
+E +++ F G+ P L+ + G ++ ++ +E+R + Y IV
Sbjct: 305 --MESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIV 362
Query: 381 MKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRC 440
++ ++E+ ++F +M G+KP Y S+++ G + V +
Sbjct: 363 IETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDV 422
Query: 441 LPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLK 500
+ D + +I+A+G+ + +L ++M P+ T+ + H D +
Sbjct: 423 VLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQE 482
Query: 501 LERKLENHQLQK 512
LE+++ + + K
Sbjct: 483 LEKQMISSDIGK 494
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 120/279 (43%), Gaps = 26/279 (9%)
Query: 186 EALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNT 245
EAL + E E G KPD + +N++ E+ +++ ++ K +P+ S
Sbjct: 311 EALMIRMEKE---GIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAI 367
Query: 246 IVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLS------EKKGSVEKVRV 299
G + G AL++F +M + GV P + ++ L+ L LS E G + +
Sbjct: 368 FSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNL 427
Query: 300 RNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAV 359
T LV +M G SG +Q A+E+FW + N L +++ G+ EE +
Sbjct: 428 ICDAYVATALV-DMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMG----YAMFGRGEEGI 482
Query: 360 KLLRIVEERKLTCVEEGYAIVMKALCDHCQ----VEEASNLFGRMLA-CGLKPKLGVYNS 414
++ E + E AI ++ C+ V+E F M + G+ P + +
Sbjct: 483 AAFSVMLEAGM----EPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSC 538
Query: 415 VISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHA 453
++ +L G LD A + M+ K PD + A + +
Sbjct: 539 MVDLLGRSGYLDEAWDFIQTMSLK---PDATIWGAFLSS 574
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 112/267 (41%), Gaps = 17/267 (6%)
Query: 224 IELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGE 283
+EL+ ++F+ M+ + S + + + +LG + A+ + +M G+ P N L+
Sbjct: 140 LELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSG 199
Query: 284 LCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVE---------VFWAVFNSG 334
S K ++ ++ R L P+ S +Q E + + +
Sbjct: 200 YASKGLSKDAIAVLK----RMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQ 255
Query: 335 LLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEAS 394
L +V L+ + G A + +++ + + + ++ L C +++A
Sbjct: 256 LWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVA----WNSLVSGLSYACLLKDAE 311
Query: 395 NLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAH 454
L RM G+KP +NS+ S TLG + A+ V M +K P+ +++TA+
Sbjct: 312 ALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGC 371
Query: 455 GKVKNWKVAYDLLMEMLGLGWIPELQT 481
K N++ A + ++M G P T
Sbjct: 372 SKNGNFRNALKVFIKMQEEGVGPNAAT 398
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 98/222 (44%), Gaps = 15/222 (6%)
Query: 223 TIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIG 282
+++ A +F +M D+ + G I G+ G + A+ +FS+M IG+ S N +I
Sbjct: 284 SLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGL----STWNAMIS 339
Query: 283 ELCSLSEKKGSVEKVR--VRNTRRPCTI----LVPNMGGNSGAIQPAVEVFWAVFNSGLL 336
L + + + R +R RP T+ L+P++ +S ++ E+ +G
Sbjct: 340 GLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSN-LKGGKEIHAFAIRNGAD 398
Query: 337 PSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNL 396
+ +V ++ +LG A ++ ++R L + ++ A H + A +L
Sbjct: 399 NNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLI----AWTAIITAYAVHGDSDSACSL 454
Query: 397 FGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKK 438
F +M G KP +V+S G+ D A +F+ M K
Sbjct: 455 FDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTK 496
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 93/245 (37%), Gaps = 24/245 (9%)
Query: 316 NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEE 375
+ G + E+ GL P +V KL+S C +G ++L +
Sbjct: 225 DGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMY 284
Query: 376 GYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELM 435
Y ++K LC + + EA +F + G P VY ++I C G L A ++ M
Sbjct: 285 IYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEM 344
Query: 436 NKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRS 495
KK P+ Y +IH H K + EML G+ + + N +
Sbjct: 345 IKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTM---------- 394
Query: 496 DLCLKLERKLENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVFQKNGKLK 555
++ C G+ D A+E K+M E G+ +A + F K K++
Sbjct: 395 --------------IKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVE 440
Query: 556 IARQL 560
+L
Sbjct: 441 KGLKL 445
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 99/293 (33%), Gaps = 30/293 (10%)
Query: 210 VLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIG 269
++ LC E EL + + P Y I GFC +G E+ M
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 270 VLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWA 329
P+ +I LC K +E A +F
Sbjct: 279 HFPSMYIYQKIIKGLCM---NKKQLE---------------------------AYCIFKN 308
Query: 330 VFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQ 389
+ + G P V ++ C G A KL + ++ + E Y +++ +
Sbjct: 309 LKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGE 368
Query: 390 VEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTA 449
+ + ML G + N++I C+ G D A +F+ M++ P+ +TY A
Sbjct: 369 ISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNA 428
Query: 450 LIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLE 502
LI K + L E+ LG P Y + L+ D L LE
Sbjct: 429 LIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNLE 481
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 163/408 (39%), Gaps = 46/408 (11%)
Query: 128 GFQFDDSVVEY---MADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFL----GR 180
GF F VV + + +++ + C + +AS+ S KA + + +
Sbjct: 131 GFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAK 190
Query: 181 HGRIHEALSLFEEMETVFGCKPDNLVFNNVLY--VLCKKQSSEETIELALRIFHKMESPD 238
G+I EA+ LF+EM D + +N ++ + CK+ S A +F + D
Sbjct: 191 RGKIDEAMRLFDEMPY-----KDQVAWNVMITGCLKCKEMDS------ARELFDRFTEKD 239
Query: 239 TYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSE----KKGSV 294
+ I G+ G AL IF +M G P + L+ L + K+ +
Sbjct: 240 VVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHI 299
Query: 295 EKVRVRNTRRPCTILVP------NMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSE 348
+ + + P +M G+I A+EVF V + L ++V L
Sbjct: 300 YILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLA-- 357
Query: 349 LCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLAC-GLKP 407
L E ++++ ++ K+ E + V+ A +V+E F M ++P
Sbjct: 358 ---LHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEP 414
Query: 408 KLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHA---HGKVKNWKVAY 464
+ Y ++ ML G L+ A E M + P+ + + L+ A +G V+ K A
Sbjct: 415 NIKHYGCMVDMLGRAGQLEEAFMFVESM---KIEPNAIVWRTLLGACKIYGNVELGKYAN 471
Query: 465 DLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQK 512
+ L+ M E Y L+ N+ + D K+ + ++ +++K
Sbjct: 472 EKLLSMRK----DESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKK 515
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 121/292 (41%), Gaps = 15/292 (5%)
Query: 215 CKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTR 274
C++ S ET+ + + K++ YS I + + A+ F QM++ G +
Sbjct: 80 CRRFSDIETLIESHKNDPKIKEEPFYST--LIRSYGQASMFNHAMRTFEQMDQYGTPRSA 137
Query: 275 SAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGG--------NSGAIQPAVEV 326
+ N L+ C S+ V ++ +R I+ + +SG + A+E+
Sbjct: 138 VSFNALLN-ACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEI 196
Query: 327 FWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAI-VMKALC 385
+ G+ +T ++S L + G+ E A L + ++ Y + +M A
Sbjct: 197 MRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQK 256
Query: 386 DHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNL 445
+ E L M + GLKP YN +++ C G LD A V+E + C P+
Sbjct: 257 E--SPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAA 314
Query: 446 TYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTY-NLVDNLLREHDRSD 496
T+ LI + ++ Y + + + + IP+ T +LV L+ R D
Sbjct: 315 TFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDD 366
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 116/306 (37%), Gaps = 15/306 (4%)
Query: 143 LGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKP 202
L + + F D++ L+ + + S IR G+ + A+ FE+M+ +G
Sbjct: 77 LAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQ-YGTPR 135
Query: 203 DNLVFNNVLYVLCKKQSSEETIELALRIFHKMES--PDTYSCGNTIVGFCRLGRLGAALE 260
+ FN +L ++ ++ +L I + PD S G I +C G A+E
Sbjct: 136 SAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIE 195
Query: 261 IFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVE---KVRVRNTRRPCTIL-----VPN 312
I QM G+ T A ++ L KKG +E + ++ C + V
Sbjct: 196 IMRQMQGKGMEVTTIAFTTILSSLY----KKGELEVADNLWNEMVKKGCELDNAAYNVRI 251
Query: 313 MGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTC 372
M + + E+ + + GL P T LM+ C G +EA K+ +E
Sbjct: 252 MSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAP 311
Query: 373 VEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVF 432
+ ++ LC E+ +F + + P ++ L D A G+
Sbjct: 312 NAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLI 371
Query: 433 ELMNKK 438
+ KK
Sbjct: 372 RTVKKK 377
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 104/256 (40%), Gaps = 21/256 (8%)
Query: 224 IELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGE 283
I A +F +M D + I +CR G + A ++F +M V+P M++
Sbjct: 162 INYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDE----MILCN 217
Query: 284 LCSLSEKKGSVEKVR------VRNTRRPCTILVP---NMGGNSGAIQPAVEVFWAVFNSG 334
+ S + G++ R + N R T L+ M +G + A E F +
Sbjct: 218 IVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRN 277
Query: 335 LLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEAS 394
L FV ++S + G+ ++A + E++ L C + ++ A + +EA
Sbjct: 278 L----FVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC----WTTMISAYVESDYPQEAL 329
Query: 395 NLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAH 454
+F M G+KP + SVIS LG LD A V ++ + ALI+ +
Sbjct: 330 RVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMY 389
Query: 455 GKVKNWKVAYDLLMEM 470
K D+ +M
Sbjct: 390 AKCGGLDATRDVFEKM 405
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 111/225 (49%), Gaps = 25/225 (11%)
Query: 244 NTIV-GFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV--EKVRVR 300
NT++ G R+G +E F +M +G+ P+ + +I L + + GS+ E V+V
Sbjct: 10 NTMMSGIVRVGLYLEGMEFFRKMCDLGIKPS----SFVIASLVTACGRSGSMFREGVQVH 65
Query: 301 NTRRPCTIL--------VPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRL 352
+L + ++ G G + + +VF + + ++ T LM
Sbjct: 66 GFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWT----SLMVGYSDK 121
Query: 353 GQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEE-ASNLFGRMLACGLKPKLGV 411
G+ EE + + + + + C E ++V+ + C + E + G+++ GL+ KL V
Sbjct: 122 GEPEEVIDIYKGMRGEGVGCNENSMSLVISS-CGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 412 YNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGK 456
NS+ISML ++GN+D+A +F+ M+++ D +++ ++ A+ +
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSER----DTISWNSIAAAYAQ 221
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 89/228 (39%), Gaps = 30/228 (13%)
Query: 346 MSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGL 405
+ C LG + A +R +E+ LT Y ++ AL H + + L+ M+ G
Sbjct: 184 IKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGC 243
Query: 406 KPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYD 465
KP L +N I L A + LM K + PD++TY +I + +A
Sbjct: 244 KPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAER 303
Query: 466 LLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCKLGQLDAAYEK 525
+ M G G+ P L+ Y + + LCK G D AY
Sbjct: 304 VYTAMHGKGYKPNLKIYQTM------------------------IHYLCKAGNFDLAYTM 339
Query: 526 AKSMLEKGIHLSAYARDTFEHVFQ---KNGKLKIARQLLETTRRVQEP 570
K + K + + DT E + + K G+L A+ ++E R P
Sbjct: 340 CKDCMRKKWYPNL---DTVEMLLKGLVKKGQLDQAKSIMELVHRRVPP 384
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 153/390 (39%), Gaps = 76/390 (19%)
Query: 147 KLFDDMKCLLMTVASQKGKVSPKAMSICIRFLG---RHGRIHEALSLFEEMETVFGCKPD 203
+LFD M+ L + P A + C FL R+G I +A ++FE M K +
Sbjct: 128 ELFDSMRFL---------GLQPNAHA-CNSFLSCLLRNGDIQKAFTVFEFMR-----KKE 172
Query: 204 NLVFNNVLYVLCKKQSSEETIELALRIFHKME-SPDTYSC-----GNTIVGFC------- 250
N V + ++ K + + E ALR+F ++E P SC NT + C
Sbjct: 173 N-VTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVY 231
Query: 251 -----------------------------RLGRLGAALEIFSQMNKIGVLPTRSAVNMLI 281
R GR AL+++ +M + A+ +I
Sbjct: 232 ETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMI 291
Query: 282 GELCSLSEKKGSVEKV---RVRNTRRP----CTILVPNMGGNSGAIQPAVEVFWAVFNSG 334
C+ EK K+ ++ +P C L+ ++G +G + +V+ + + G
Sbjct: 292 SA-CTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLG-KAGKVGLVFKVYSVLKSLG 349
Query: 335 LLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEG-YAIVMKALCDHCQVEEA 393
P + L++ L + + E+ ++L ++ L C+ E Y M + E+A
Sbjct: 350 HKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKA 409
Query: 394 SNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHA 453
L M GL YN VIS A+ V+E M ++ C P+ TY +L+ +
Sbjct: 410 VKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS 469
Query: 454 HGKVKNWKVAYDLLMEMLGLGWIPELQTYN 483
W D+L ++ P++ YN
Sbjct: 470 CIWGSLWDEVEDILKKV-----EPDVSLYN 494
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 131/355 (36%), Gaps = 67/355 (18%)
Query: 216 KKQSSEETIELALRIFHKME----SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVL 271
+K S + + AL +F M P+ ++C + + R G + A +F M K +
Sbjct: 115 RKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENV 174
Query: 272 PTRSAVNMLIGELCSLSEKKGSVEKVRV------RNTRRPC--TILVPNMGGNSGAIQPA 323
+ ML +++E KG +R+ RR C +L G I
Sbjct: 175 TGHTYSLMLK----AVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNV 230
Query: 324 VEV--FWAVFN-SGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIV 380
E W V G + + L+S R G++E A+ + + K++ E+
Sbjct: 231 YETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDA---- 286
Query: 381 MKALCDHCQVEE----ASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMN 436
M A+ C EE A +F ML G+KP L N++I+ L G + V+ ++
Sbjct: 287 MYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLK 346
Query: 437 KKRCLPDNLTYTALIHAHGKVKN------------------------------------W 460
PD T+ AL+ A K W
Sbjct: 347 SLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYW 406
Query: 461 KVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQLQKLCK 515
+ A LL EM G G +YNLV + + +S + L + H Q+ CK
Sbjct: 407 EKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVAL----LVYEHMAQRDCK 457
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 345 LMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACG 404
+M T +A++ I+++ K T +E + ++ ALC H +E+A MLA
Sbjct: 195 MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEF---MLASK 251
Query: 405 LKPKLGV--YNSVISMLCTLG-NLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWK 461
+ V +N +++ C + ++ A ++ M P+ +Y+ +I KV N
Sbjct: 252 KLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLF 311
Query: 462 VAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLE-----------NHQL 510
+ L EM G P ++ YN + +L D D +KL +KL N +
Sbjct: 312 DSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMI 371
Query: 511 QKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVF 548
+ LC+ G+LD A +M+ + + + DTF H F
Sbjct: 372 RPLCEAGKLDVARNVLATMISENLSPTV---DTF-HAF 405
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/395 (19%), Positives = 147/395 (37%), Gaps = 55/395 (13%)
Query: 155 LLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVL 214
L ++G K+ + I LG H + + A L +M F D ++++
Sbjct: 142 LAFKWGEKRGCDDQKSCDLMIWVLGNHQKFNIAWCLIRDM---FNVSKDT---RKAMFLM 195
Query: 215 CKKQSSEETIELALRIFHKME----SPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGV 270
+ ++ A+R F M+ +P + + CR G + A E K+
Sbjct: 196 MDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLFP 255
Query: 271 LPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAV 330
+ N+++ C++ + A ++ +
Sbjct: 256 VDVE-GFNVILNGWCNIWTD-----------------------------VTEAKRIWREM 285
Query: 331 FNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQV 390
N + P+ ++S ++G ++++L +++R L E Y ++ L
Sbjct: 286 GNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCF 345
Query: 391 EEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTAL 450
+EA L ++ GLKP YNS+I LC G LD A V M + P T+ A
Sbjct: 346 DEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAF 405
Query: 451 IHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLENHQ- 509
+ A K +V + + LG P +T+ L+ L + + + LK+ +++ +
Sbjct: 406 LEAVNFEKTLEVLGQMKISDLG----PTEETFLLILGKLFKGKQPENALKIWAEMDRFEI 461
Query: 510 ----------LQKLCKLGQLDAAYEKAKSMLEKGI 534
+Q L G L+ A E M KG
Sbjct: 462 VANPALYLATIQGLLSCGWLEKAREIYSEMKSKGF 496
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 110/282 (39%), Gaps = 42/282 (14%)
Query: 224 IELALRIFHKMESPDTYSCGNTIVGFCRL-------GRLGAALEIFSQM-NKIGVLPTRS 275
E A ++F +M + D C +++ F L + E+F+++ K+ + P
Sbjct: 125 FENAQKVFEEMPNRD---CKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIV 181
Query: 276 AVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGL 335
+ N LI LC ++ AV + + N GL
Sbjct: 182 SYNTLIKALCE------------------------------KDSLPEAVALLDEIENKGL 211
Query: 336 LPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASN 395
P L+ GQ E ++ + E+ + Y + L + + +E N
Sbjct: 212 KPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVN 271
Query: 396 LFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHG 455
LFG + A GLKP + +N++I G +D A ++ + K PD T+ L+ A
Sbjct: 272 LFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMC 331
Query: 456 KVKNWKVAYDLLMEMLGLGW-IPELQTYNLVDNLLREHDRSD 496
K +++ A +L E + + + LVD L++ R +
Sbjct: 332 KAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREE 373
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 361 LLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLC 420
+ +++ E + GY I++ LC + +EA N+F +L GL+P + YN M+
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYN----MMI 56
Query: 421 TLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVA 463
+L A ++ M ++ +PD +TY ++I HG K K+A
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMI--HGLCKQNKLA 97
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 112/259 (43%), Gaps = 20/259 (7%)
Query: 201 KPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALE 260
+PD L+ N +Y C + ++ + + F KM+SP+ I G+ + G A++
Sbjct: 256 EPDLLISLNTMYAKCGQVATAKIL------FDKMKSPNLILWNAMISGYAKNGYAREAID 309
Query: 261 IFSQMNKIGVLPTRSAVNMLI---GELCSLSEKKGSVEKVRVRNTRRPCTI--LVPNMGG 315
+F +M V P ++ I ++ SL + + E V + R I + +M
Sbjct: 310 MFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFA 369
Query: 316 NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEE 375
G+++ A VF + ++ + ++V G+ EA+ L R +E + +
Sbjct: 370 KCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLH----GRAREAISLYRAMERGGVHPNDV 425
Query: 376 GYAIVMKALCDHC-QVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFEL 434
+ ++ A C+H V E F RM + P+ Y VI +L G+LD A V +
Sbjct: 426 TFLGLLMA-CNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKC 484
Query: 435 MNKKRCLPDNLTYTALIHA 453
M + P + AL+ A
Sbjct: 485 MPVQ---PGVTVWGALLSA 500
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 136/359 (37%), Gaps = 53/359 (14%)
Query: 162 QKGKVSPKAMSICIRFLG----------------------------------RHGRIHEA 187
Q GK+S S CI+F+G ++G++
Sbjct: 126 QHGKISVSTYSSCIKFVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSC 185
Query: 188 LSLFEEMETVFGCKPDNLVFNNVLYVLCK-KQSSEETIELALRIFHKMESPDTYSCGNTI 246
+ LF++M+ G KPD + +N +L K K + IEL + H D+ G +
Sbjct: 186 IKLFDQMKRD-GLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVL 244
Query: 247 VGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPC 306
GR A QM G P + L+ KG +K T
Sbjct: 245 AICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSW----KGDYKKADELMTEMKS 300
Query: 307 TILVPN---------MGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEE 357
LVPN + G + E+ + ++G + LM L + G+ EE
Sbjct: 301 IGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEE 360
Query: 358 AVKLLRIVEERKLTCVEEGYA--IVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSV 415
A + ++ + + +GYA I++ ALC + +EA L K L + N++
Sbjct: 361 ARSIFDDMKGKGVR--SDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTM 418
Query: 416 ISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLG 474
+ C G ++ M + + M+++ PD T+ LI K K +AY ++M G
Sbjct: 419 LCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKG 477
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 119/279 (42%), Gaps = 17/279 (6%)
Query: 249 FCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVE--------KVRVR 300
+ R+G A ++F +M + T + N L+ C S+K VE K+ +
Sbjct: 116 YGRVGMFENAQKVFDEMPERNCKRTALSFNALLN-ACVNSKKFDLVEGIFKELPGKLSIE 174
Query: 301 NTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVK 360
L+ + G G+ AV + + N GL P L+ E G+ EE +
Sbjct: 175 PDVASYNTLIKGLCG-KGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQ 233
Query: 361 LLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLC 420
+ + E+ + Y + L + EE +LF ++ LKP + + ++I
Sbjct: 234 IWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFV 293
Query: 421 TLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLG-WIPEL 479
+ G LD A+ ++ + K C P + +L+ A K + + AY+L E+ + E
Sbjct: 294 SEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEA 353
Query: 480 QTYNLVDNLLR--EHDRSDLCLKLERKLENHQLQKLCKL 516
+VD L++ + D ++ ++L + N LQ CKL
Sbjct: 354 VLQEVVDALVKGSKQDEAEEIVELAKT--NDYLQ--CKL 388
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 118/276 (42%), Gaps = 21/276 (7%)
Query: 188 LSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIV 247
L + ++G D V N++L + CK + +L F +ME D S I
Sbjct: 163 LQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDL----FDQMEQRDMVSWNTMIS 218
Query: 248 GFCRLGRLGAALEIFSQMNKIGVLP---TRSAVNMLIGELCSLSEKKGSVEKVRVRNTRR 304
G+ +G + L++ +M G+ P T A + G +C L + G + ++ T
Sbjct: 219 GYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDL--EMGRMLHCQIVKTGF 276
Query: 305 PCTI----LVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVK 360
+ + M G + + V + N ++ T ++ LM RLG+ E+A+
Sbjct: 277 DVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLM----RLGRAEKALI 332
Query: 361 LLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLC 420
+ + + E A V+ + + +++ G +L G NS+I+M
Sbjct: 333 VFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYA 392
Query: 421 TLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGK 456
G+LD ++ +FE MN++ D +++ A+I + +
Sbjct: 393 KCGHLDKSLVIFERMNER----DLVSWNAIISGYAQ 424
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 30/230 (13%)
Query: 253 GRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPN 312
GR+ A+EI M G P+ + N ++ L S ++ + K+ V P
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVS-AKLFDEIHKIFVS---------APK 195
Query: 313 MGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTC 372
+G VE+ N L+ LC G E A++LL ++K
Sbjct: 196 LG---------VEIDACCLNI-----------LIKGLCESGNLEAALQLLDEFPQQKSRP 235
Query: 373 VEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVF 432
++ +++ C+ + EEA L RM ++P +N +IS L G ++ + +
Sbjct: 236 NVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLL 295
Query: 433 ELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTY 482
E M K C P+ TY +++ K A +++ +M+ G P +Y
Sbjct: 296 ERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSY 345
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 18/181 (9%)
Query: 314 GGNSGAIQPAVEVFWAVFNSGLLPST---------FVVVKLMSELCRLGQTEEAVKLLRI 364
G +G I A+E+ + + + G PS+ V KL E+ ++ V ++
Sbjct: 142 GNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKI-----FVSAPKL 196
Query: 365 VEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGN 424
E C+ I++K LC+ +E A L +P + ++ +I C G
Sbjct: 197 GVEIDACCLN----ILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGK 252
Query: 425 LDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNL 484
+ A + E M K+R PD +T+ LI K + DLL M G P TY
Sbjct: 253 FEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQE 312
Query: 485 V 485
V
Sbjct: 313 V 313
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 97/236 (41%), Gaps = 12/236 (5%)
Query: 138 YMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETV 197
++ + L KLFD++ + ++ ++ ++I I+ L G + AL L +E
Sbjct: 172 FILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQ 231
Query: 198 FGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGA 257
+P+ + F+ ++ C K EE +L R+ + PDT + I G + GR+
Sbjct: 232 -KSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEE 290
Query: 258 ALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNT-----RRPCTILVPN 312
+++ +M G P + L L +KK ++E + + RP +
Sbjct: 291 GIDLLERMKVKGCEPNPGTYQEV---LYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKK 347
Query: 313 MGGNSGAIQPAVEVFWAV---FNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIV 365
M + VE+ W + N G +P T + K++ + + L RI
Sbjct: 348 MVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKNNDDSQANLDRIT 403
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 141/351 (40%), Gaps = 32/351 (9%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
+ L GR HEA ++F+ + G +P + + +L + ++ + +
Sbjct: 52 MNVLIERGRPHEAQTVFKTLAET-GHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLI------------G 282
D+ I F G + A++ +M ++G+ PT S N LI
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 283 ELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVV 342
EL L ++G+V+ V R +LV ++ A EV + G+ P T
Sbjct: 171 ELLDLMLEEGNVD---VGPNIRTFNVLV-QAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226
Query: 343 VKLMSELCRLGQT----EEAVKLLRIVEERK---LTCVEEGYAIVMKALCDHCQVEEASN 395
+ + + G+T E V+ + + E+ K TC IV+ C +V +
Sbjct: 227 NTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTC-----GIVVGGYCREGRVRDGLR 281
Query: 396 LFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHG 455
RM ++ L V+NS+I+ + + D V LM + D +TY+ +++A
Sbjct: 282 FVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWS 341
Query: 456 KVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLE 506
+ A + EM+ G P+ Y++ L + + R+ K E LE
Sbjct: 342 SAGYMEKAAQVFKEMVKAGVKPDAHAYSI---LAKGYVRAKEPKKAEELLE 389
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 87/430 (20%), Positives = 167/430 (38%), Gaps = 60/430 (13%)
Query: 166 VSPKAMS-ICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETI 224
+SP+ +S + R H +AL F+ P + F L++L + + ++
Sbjct: 64 LSPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAW 123
Query: 225 ELALRIFHKMESPDTYSCGNTIVGFCRLGRLGA---ALEIFSQMNK------IGVLPTRS 275
L + + + P+ S + + C++ + G+ LE F +M K GV
Sbjct: 124 ALMAEV--RKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGV----D 177
Query: 276 AVNMLIGELCS---LSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFW-AVF 331
N+L+ C+ + E + EK+ R T+ + +G A E+F+ +
Sbjct: 178 EFNILLRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 332 NSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEE-------RKLTCVEEGYAIVMKAL 384
G P++ + C+ EA++L ++ + LT + G + +
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKI 297
Query: 385 CDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDN 444
+A LF + GL P G YN+++S L G++ A+ V + M +K PD+
Sbjct: 298 -------KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDS 350
Query: 445 LTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERK 504
+T+ ++ K K + G + E +L+ + + +KL
Sbjct: 351 VTFHSMFIGMMKSKEF-----------GFNGVCEYYQKMKERSLVPKTPTIVMLMKL--- 396
Query: 505 LENHQLQKLCKLGQLDAAYEKAKSMLEKGIHLSAYARDTFEHVF----QKNGKLKIARQL 560
C G+++ + K MLEKG +A + + N + + Q
Sbjct: 397 --------FCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQT 448
Query: 561 LETTRRVQEP 570
+E R V EP
Sbjct: 449 VERGRCVSEP 458
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 155/372 (41%), Gaps = 43/372 (11%)
Query: 139 MADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVF 198
+ D G+ DD L+ +K VS A+ + R+G++ L F +M
Sbjct: 198 LIDMYGKCGFMDD-AVLVFQHMEEKDTVSWNAI---VASCSRNGKLELGLWFFHQMPN-- 251
Query: 199 GCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAA 258
PD + +N ++ K A ++ M +P++ S + G+ + G A
Sbjct: 252 ---PDTVTYNELIDAFVKSGDFNN----AFQVLSDMPNPNSSSWNTILTGYVNSEKSGEA 304
Query: 259 LEIFSQMNKIGVLPTRSAVNMLI-----------GELC-SLSEKKGSVEKVRVRNTRRPC 306
E F++M+ GV ++++++ G L + + K G +V V +
Sbjct: 305 TEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASA---- 360
Query: 307 TILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVE 366
+ +M G ++ A +FW + L+ V +++S R G + EA+KL ++
Sbjct: 361 ---LIDMYSKCGMLKHAELMFWTMPRKNLI----VWNEMISGYARNGDSIEAIKLFNQLK 413
Query: 367 ERKLTCVEEGYAIVMKALCDHCQV--EEASNLFGRML-ACGLKPKLGVYNSVISMLCTLG 423
+ + + + + A+C HC+V E F M+ +KP + S+I + G
Sbjct: 414 QERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRG 473
Query: 424 NLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQT-Y 482
+ A V + D + + AL+ A K+ K A + +M+ LG + + Y
Sbjct: 474 EVWQAKQVIQEFGFGY---DGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLY 530
Query: 483 NLVDNLLREHDR 494
++ NL H+R
Sbjct: 531 IVMSNLYAYHER 542
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 172/418 (41%), Gaps = 59/418 (14%)
Query: 182 GRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYS 241
G ++ A+ LF+EM P+ V + V +S + ++ A R+F++M DT +
Sbjct: 111 GDMNTAVKLFDEM-------PERSVVSWTAMVNGCFRSGK--VDQAERLFYQMPVKDTAA 161
Query: 242 CGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVR--- 298
+ + G+ + G++ AL++F QM P ++ ++ +C L + + S E +
Sbjct: 162 WNSMVHGYLQFGKVDDALKLFKQM------PGKNVISWTT-MICGLDQNERSGEALDLFK 214
Query: 299 ------VRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRL 352
+++T RP T ++ N+ A ++V + G L +V L++
Sbjct: 215 NMLRCCIKSTSRPFTCVITAC-ANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANC 273
Query: 353 GQTEEAVKLL--RIVEERKL-TCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKL 409
+ ++ K+ ++ E+ + T + GY++ K E+A ++F ML + P
Sbjct: 274 KRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKH-------EDALSIFSGMLRNSILPNQ 326
Query: 410 GVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHGKVKNWKVAYDLLME 469
+ S ++ LG LD + + K D +L+ + N A + ++
Sbjct: 327 STFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIK 386
Query: 470 MLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKLE--NHQLQKLCKLGQLDAAYEKAK 527
+ + ++N + +H R + ++ N + ++ G L A
Sbjct: 387 IFK----KSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCG- 441
Query: 528 SMLEKGIHLSAYARDTFEHVFQK-------------NGKLKIARQLLETTRRVQEPEE 572
LEKG L Y H+ +K GKLK A +L+E R V +P E
Sbjct: 442 -FLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIE--RMVVKPNE 496
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Query: 340 FVVVKLMS---ELCRLGQ-TEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASN 395
FV VK M LC +EA+ +LR E + Y +V++ D + A
Sbjct: 127 FVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADM 186
Query: 396 LFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIHAHG 455
L M GL P + Y S+I+ C G +D A + + M+K C+ +++TY+ ++
Sbjct: 187 LIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVC 246
Query: 456 KVKNWKVAYDLLMEML---GLGWI-PELQTYNLV 485
K + + A +LL EM G G I P TY LV
Sbjct: 247 KSGDMERALELLAEMEKEDGGGLISPNAVTYTLV 280
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 114/265 (43%), Gaps = 30/265 (11%)
Query: 173 ICIRFLGRHGRIHEALS---LFEEMETVFGCKPDNLV-FNNVLYVLCKKQSSEETIELAL 228
IC + +G + S LF+EM NLV +N++L K S + + L
Sbjct: 145 ICNTLIHMYGSFRDQASARKLFDEMPH------KNLVTWNSILDAYAK---SGDVVSARL 195
Query: 229 RIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLS 288
+F +M D + + I G+ + G ALEIF QM ++G +++ ++ +C+ +
Sbjct: 196 -VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMG--SSKANEVTMVSVICACA 252
Query: 289 E----KKGSVEKVRVRNTRRPCTILVP----NMGGNSGAIQPAVEVFWAVFNSGLLPSTF 340
+G + + P T+++ +M G+I A W+VF + T
Sbjct: 253 HLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDA----WSVFYRASVKETD 308
Query: 341 VVV--KLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFG 398
++ ++ L G E+++L + E K+ E + ++ A V+EA + F
Sbjct: 309 ALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFK 368
Query: 399 RMLACGLKPKLGVYNSVISMLCTLG 423
+ G +PK Y ++ +L G
Sbjct: 369 SLKESGAEPKSEHYACMVDVLSRAG 393
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 149/391 (38%), Gaps = 48/391 (12%)
Query: 126 QMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSI------------ 173
+ GF D +VV + + K + + L T+ +K V+ +M
Sbjct: 153 KTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAI 212
Query: 174 -CIRFLGRHGRIHEAL---SLFEEMETVFGCKPDNLV--------FNNVLYV---LCKKQ 218
C R L R G S+ +V C+ V F +YV L
Sbjct: 213 ECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMY 272
Query: 219 SSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMN----KIGVLPTR 274
+ +E A + ME D S + IVG R G +G AL +F +M+ KI
Sbjct: 273 AKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIP 332
Query: 275 SAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPN----MGGNSGAIQPAVEVFWAV 330
S +N L K S + T LV N M G + A++VF +
Sbjct: 333 SILNCF--ALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGM 390
Query: 331 FNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQV 390
++ T +V G +EA+KL + +T + A V+ A + +
Sbjct: 391 IEKDVISWTALVTGNTHN----GSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLL 446
Query: 391 EEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTAL 450
E + G + G L V NS+++M G+L+ A +F M + D +T+T L
Sbjct: 447 EFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSME----IRDLITWTCL 502
Query: 451 IHAHGK---VKNWKVAYDLLMEMLGLGWIPE 478
I + K +++ + +D + + G+ PE
Sbjct: 503 IVGYAKNGLLEDAQRYFDSMRTVYGITPGPE 533
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Query: 325 EVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKAL 384
E+F + GL+P+ V ++ LC+ G +EA+KL ++ ++ Y V++A
Sbjct: 120 EIFKKMKEGGLIPN---AVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 385 CDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDN 444
C ++E+A +F +M G+ P Y ++ L LD A+ M + P+
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 445 LTYTALIHAHGKVKNWKVA 463
T+ L+ A +VK + A
Sbjct: 237 PTFVELVDALCRVKGVEQA 255
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 76/179 (42%), Gaps = 33/179 (18%)
Query: 260 EIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGA 319
EIF +M + G++P +AV ML G LC G
Sbjct: 120 EIFKKMKEGGLIP--NAVAMLDG-LCK------------------------------DGL 146
Query: 320 IQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAI 379
+Q A+++F + + G +P + ++ C+ + E+A ++ R ++ + Y +
Sbjct: 147 VQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGV 206
Query: 380 VMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKK 438
+++ L + +++A ML G P + + ++ LC + ++ A + +N+K
Sbjct: 207 LVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQK 265
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Query: 325 EVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKAL 384
E+F + GL+P+ V ++ LC+ G +EA+KL ++ ++ Y V++A
Sbjct: 120 EIFKKMKEGGLIPN---AVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 385 CDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDN 444
C ++E+A +F +M G+ P Y ++ L LD A+ M + P+
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 445 LTYTALIHAHGKVKNWKVA 463
T+ L+ A +VK + A
Sbjct: 237 PTFVELVDALCRVKGVEQA 255
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 76/179 (42%), Gaps = 33/179 (18%)
Query: 260 EIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGA 319
EIF +M + G++P +AV ML G LC G
Sbjct: 120 EIFKKMKEGGLIP--NAVAMLDG-LCK------------------------------DGL 146
Query: 320 IQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAI 379
+Q A+++F + + G +P + ++ C+ + E+A ++ R ++ + Y +
Sbjct: 147 VQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGV 206
Query: 380 VMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKK 438
+++ L + +++A ML G P + + ++ LC + ++ A + +N+K
Sbjct: 207 LVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQK 265
>AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26596207-26598192 FORWARD
LENGTH=661
Length = 661
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 3/171 (1%)
Query: 118 NFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRF 177
+FF W Q GF D +E M L R + + L+ V + K+ + + I
Sbjct: 396 SFFCWVAIQPGFTHDAYTIERMMAMLARNGQVELVDKLISKVRIEGIKLPFSTIRLIIDL 455
Query: 178 LGRHGRIHEALSLFEEMETVFGCKPD---NLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
G + A+ +F E T+ G D L+++++L L K + + E +E +
Sbjct: 456 YGISKKPEAAIKVFNEDRTLCGSISDFNLMLLYSSLLRTLTKCKRNAEALETLEDMMLTG 515
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC 285
SPD + + F G + +FS + +IG+ P + +L+ C
Sbjct: 516 VSPDIQTFSGLMYHFALQGEIQTVERLFSMVRQIGLEPDPYMLKLLVQAYC 566
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 96/227 (42%), Gaps = 12/227 (5%)
Query: 323 AVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMK 382
A+E F ++ +GL+P ++ + G+ EE + L ++++ K
Sbjct: 240 AIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGK 299
Query: 383 ALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLP 442
+ + + M + +KP + VYN+++ + G A +F M + P
Sbjct: 300 MFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTP 359
Query: 443 DNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDN------LLREHDR-- 494
+ T TAL+ +GK + + A L EM W + YN + N L E +R
Sbjct: 360 NEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLF 419
Query: 495 SDLCLKLERKLENHQLQKLCKL----GQLDAAYEKAKSMLEKGIHLS 537
+D+ ++ + +N + + G+ + A E + ML+ G+ ++
Sbjct: 420 NDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVN 466
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 110/277 (39%), Gaps = 38/277 (13%)
Query: 172 SICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIF 231
S + + G++ E LSL+E G KPD + F+ VL + + + I L+
Sbjct: 260 SAILDVYSKSGKVEEVLSLYERA-VATGWKPDAIAFS-VLGKMFGEAGDYDGIRYVLQEM 317
Query: 232 HKMESPDTYSCGNTIV-GFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEK 290
M+ NT++ R G+ G A +F++M + G+ P + L+
Sbjct: 318 KSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALV--------- 368
Query: 291 KGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELC 350
+ G + + A+++ W + P F++ + +C
Sbjct: 369 ---------------------KIYGKARWARDALQL-WEEMKAKKWPMDFILYNTLLNMC 406
Query: 351 -RLGQTEEAVKLLRIVEERKLTCVEE--GYAIVMKALCDHCQVEEASNLFGRMLACGLKP 407
+G EEA +L ++E + C + Y ++ + E+A LF ML G++
Sbjct: 407 ADIGLEEEAERLFNDMKE-SVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQV 465
Query: 408 KLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDN 444
+ ++ L +D + VF+L K+ PD+
Sbjct: 466 NVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDD 502
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 121/290 (41%), Gaps = 27/290 (9%)
Query: 227 ALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCS 286
A ++F D + + G G AL +F M GV P N++I L
Sbjct: 429 AKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLL- 487
Query: 287 LSEKKGSVEKVRVRNTRRPCTILVPN-------MGG--NSGAIQPAVEVFWAVFNSGLLP 337
+ G V++ + + + ++PN M G +G + A+ + SGL P
Sbjct: 488 ---RNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRP 544
Query: 338 STFVVVKLMSELCRL-----GQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEE 392
+ F + +S L G+T ++R ++ L +E + M A C + +
Sbjct: 545 NAFSITVALSACAHLASLHIGRTIHGY-IIRNLQHSSLVSIETSL-VDMYAKCG--DINK 600
Query: 393 ASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIH 452
A +FG L +L + N++IS GNL A+ ++ + PDN+T T ++
Sbjct: 601 AEKVFGSKL----YSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLS 656
Query: 453 AHGKVKNWKVAYDLLMEMLGLGWI-PELQTYNLVDNLLREHDRSDLCLKL 501
A + A ++ +++ + P L+ Y L+ +LL ++ L+L
Sbjct: 657 ACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRL 706
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 147/339 (43%), Gaps = 48/339 (14%)
Query: 168 PKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELA 227
P A+ C G G + +A+ LFE+M + D + +N++L L K + A
Sbjct: 155 PNALIDCYSRCGGLG-VRDAMKLFEKMS-----ERDTVSWNSMLGGLVKAGELRD----A 204
Query: 228 LRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVN---MLIGEL 284
R+F +M D S + G+ R + A E+F +M P R+ V+ M++G
Sbjct: 205 RRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKM------PERNTVSWSTMVMG-- 256
Query: 285 CSLSEKKGSVEKVRVRNTRRP--------CTILVPNMGGNSGAIQPAVEVFWAVFNSGLL 336
K G +E RV + P TI++ G ++ A + + SGL
Sbjct: 257 ---YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGY-AEKGLLKEADRLVDQMVASGLK 312
Query: 337 PSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCD---HC-QVEE 392
V+ +++ G +++ I++ L A V+ AL D C +++
Sbjct: 313 FDAAAVISILAACTESGLLSLGMRIHSILKRSNLG----SNAYVLNALLDMYAKCGNLKK 368
Query: 393 ASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNLTYTALIH 452
A ++F + K L +N+++ L G+ A+ +F M ++ PD +T+ A++
Sbjct: 369 AFDVFNDI----PKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLC 424
Query: 453 A--HGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLL 489
+ H + + + Y ME + +P+++ Y + +LL
Sbjct: 425 SCNHAGLIDEGIDYFYSMEKV-YDLVPQVEHYGCLVDLL 462
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 119/303 (39%), Gaps = 56/303 (18%)
Query: 211 LYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGV 270
+YV C E+I+ A ++F +M D S I + R+G + A E+F
Sbjct: 193 MYVKC------ESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFES------ 240
Query: 271 LPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQPAVEVFWAV 330
LPT+ V T +V N+ Q A+E F +
Sbjct: 241 LPTKDMV---------------------------AWTAMVTGFAQNAKP-QEALEYFDRM 272
Query: 331 FNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCD---H 387
SG+ V +S +LG ++ A + ++I ++ + + ++ AL D
Sbjct: 273 EKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYS--PSDHVVIGSALIDMYSK 330
Query: 388 C-QVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELM-NKKRCLPDNL 445
C VEEA N+F M + Y+S+I L T G A+ +F M + P+ +
Sbjct: 331 CGNVEEAVNVFMSM----NNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTV 386
Query: 446 TYTALIHA---HGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLE 502
T+ + A G V + +D + + G+ P Y + +LL R L+L
Sbjct: 387 TFVGALMACSHSGLVDQGRQVFDSMYQTFGVQ--PTRDHYTCMVDLLGRTGRLQEALELI 444
Query: 503 RKL 505
+ +
Sbjct: 445 KTM 447
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 138/340 (40%), Gaps = 43/340 (12%)
Query: 217 KQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGA-ALEIFSQMNKIG-VLPTR 274
K S++ +++ ++F +ME S I G+ + L A+ +FS+M G V P
Sbjct: 314 KCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNH 373
Query: 275 SAVNMLIGELCSLSE------------KKGSVEKVRVRNTRRPCTILVPNMGGNSGAIQP 322
+ +LS+ K+G V N+ V +M S ++
Sbjct: 374 FTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANS-------VISMFVKSDRMED 426
Query: 323 AVEVFWAVFNSGLLP-STFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVM 381
A F ++ L+ +TF + CR E+A KLL + ER+L +A ++
Sbjct: 427 AQRAFESLSEKNLVSYNTF-----LDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLL 481
Query: 382 KALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCL 441
+ + + + + +++ GL V N++ISM G++D A VF M +
Sbjct: 482 SGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV- 540
Query: 442 PDNLTYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTY----------NLVDNLLRE 491
+++T++I K + +M+ G P TY LV R
Sbjct: 541 ---ISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRH 597
Query: 492 HDRSDLCLKLERKLENH--QLQKLCKLGQLDAAYEKAKSM 529
+ K++ K+E++ + LC+ G L A+E +M
Sbjct: 598 FNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTM 637
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 7/173 (4%)
Query: 335 LLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHC-QVEEA 393
LLP T V++ + E + E A+++ ++ E+ G + + + C Q E+A
Sbjct: 112 LLPRT--VLESLHERITALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKA 169
Query: 394 SNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELM-NKKRCLPDNLTYTALIH 452
LF M+ G VY +++S G D A + E M + C PD TY+ LI
Sbjct: 170 HELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIK 229
Query: 453 AHGKVKNWKVAYDLLMEMLGLGWIPELQTYNLVDNLLREHDRSDLCLKLERKL 505
+ +V + DLL +M G P TYN L+ + ++ + +++E L
Sbjct: 230 SFLQVFAFDKVQDLLSDMRRQGIRPNTITYN---TLIDAYGKAKMFVEMESTL 279
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 168/389 (43%), Gaps = 57/389 (14%)
Query: 91 RYKGDLSSNFVLRVLMSYQHLGRAKTL----NFFSWAGTQMGFQFDDSVVEY---MADFL 143
R +G NF L V++ + +GR + + +A + G +FD V M L
Sbjct: 38 RGQGLYPDNFTLPVVL--KSIGRLRKVIEGEKVHGYA-VKAGLEFDSYVSNSLMGMYASL 94
Query: 144 GR----RKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFG 199
G+ K+FD+M V S G +S ++G +GR +A+ +F+ M
Sbjct: 95 GKIEITHKVFDEMP--QRDVVSWNGLISS--------YVG-NGRFEDAIGVFKRMS---- 139
Query: 200 CKPDNLVFN-NVLYVLCKKQSSEETIELALRIFHKM--ESPDTYSCGNTIVG-FCRLGRL 255
+ NL F+ + S+ + +E+ RI+ + E + GN +V FC+ G L
Sbjct: 140 -QESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCL 198
Query: 256 GAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMGG 315
A +F M V + +M+ G + + G +++ RV R P +V
Sbjct: 199 DKARAVFDSMRDKNV---KCWTSMVFGYVST-----GRIDEARVLFERSPVKDVVLWTAM 250
Query: 316 NSGAIQ-----PAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKL 370
+G +Q A+E+F + +G+ P FV+V L++ + G E+ + + E ++
Sbjct: 251 MNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRV 310
Query: 371 TCVE-EGYAIV-MKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHA 428
T + G A+V M A C C +E A +F + + + S+I L G A
Sbjct: 311 TVDKVVGTALVDMYAKCG-C-IETALEVFYEI----KERDTASWTSLIYGLAMNGMSGRA 364
Query: 429 MGVFELMNKKRCLPDNLTYTALIHA--HG 455
+ ++ M D +T+ A++ A HG
Sbjct: 365 LDLYYEMENVGVRLDAITFVAVLTACNHG 393
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 116/276 (42%), Gaps = 12/276 (4%)
Query: 198 FGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGA 257
FG + D V N+++++ ++ I A RIF +M D S + + G+C+ G +
Sbjct: 146 FGFQNDVYVENSLVHMY----ANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVEN 201
Query: 258 ALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSVEKVRVRNTRRPCTILVPNMG--G 315
A E+F +M + +N C + E ++ T++V +
Sbjct: 202 AREMFDEMPHRNLFTWSIMINGYAKNNC-FEKAIDLFEFMKREGVVANETVMVSVISSCA 260
Query: 316 NSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEE 375
+ GA++ + V S + + + L+ R G E+A+ + + E
Sbjct: 261 HLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETD----SL 316
Query: 376 GYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELM 435
++ ++K L H +A + F +M++ G P+ + +V+S G ++ + ++E M
Sbjct: 317 SWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENM 376
Query: 436 NKKRCLPDNLT-YTALIHAHGKVKNWKVAYDLLMEM 470
K + L Y ++ G+ A + +++M
Sbjct: 377 KKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKM 412
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 117/307 (38%), Gaps = 21/307 (6%)
Query: 143 LGRRKLFDDMKCLLMTVASQKGKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKP 202
L + + F D++ L+ + + + +S IR GR A+ +FEEM+ + P
Sbjct: 77 LAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKL--GTP 134
Query: 203 DNLVFNNVLYVLCKKQSSEETIELALRIF---HKMESPDTYSCGNTIVGFCRLGRLGAAL 259
+V N L C E + F + +PD S G I +C G+ A+
Sbjct: 135 RTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAM 194
Query: 260 EIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV---EKVRVRNTRRPCTI--LVPN-- 312
EI M GV T A ++G L K G V E + + + C + V N
Sbjct: 195 EIMRDMEVKGVEVTIIAFTTILGSLY----KNGLVDEAESLWIEMVNKGCDLDNTVYNVR 250
Query: 313 -MGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLT 371
M + + E+ + + GL P T LM+ C G EA K+ +E+
Sbjct: 251 LMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQPNAA 310
Query: 372 CVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGV 431
+ ++ LC + ++ +F + P + L ++ A GV
Sbjct: 311 T----FRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDARGV 366
Query: 432 FELMNKK 438
++ KK
Sbjct: 367 ARIVKKK 373
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 14/221 (6%)
Query: 227 ALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLI---GE 283
A ++F ++ PD + G+ R G LE+F +M G+ P +V + +
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQ 230
Query: 284 LCSLSEKKGSVEKVR----VRNTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPST 339
+ +L++ K E V+ + + T LV +M G I+ AVEVF + +
Sbjct: 231 VGALAQGKWIHEFVKKKRWIESDVFVGTALV-DMYAKCGCIETAVEVFEKLTRR----NV 285
Query: 340 FVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQ-VEEASNLFG 398
F L+ G ++A L +E + + + A C H +EE +
Sbjct: 286 FSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLE 345
Query: 399 RMLA-CGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKK 438
M A G+ PK Y+ ++ ++C G LD A+ + E M K
Sbjct: 346 NMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMK 386
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 125/285 (43%), Gaps = 24/285 (8%)
Query: 188 LSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKME----SPDTYSCG 243
+LFE+ F D++ +N +L + E+ +E+ LR+F M PD + G
Sbjct: 426 FNLFED----FRNNADSVSWNTILTACLQH---EQPVEM-LRLFKLMLVSECEPDHITMG 477
Query: 244 NTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLI---GELCSLSEKKGSVEKVRVR 300
N + G + L ++ K G+ P + N LI + SL + + + + R
Sbjct: 478 NLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR 537
Query: 301 NTRRPCTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVK 360
+ T++V SG + A+ +F + ++G+ P+ V +++ +G EE +K
Sbjct: 538 DVVSWSTLIVGY--AQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLK 595
Query: 361 LLRIVE-ERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGVYNSVISML 419
L ++ E ++ +E + V+ L ++ EA M L+P + V+ +++S
Sbjct: 596 LYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEM---KLEPDVVVWKTLLSAC 652
Query: 420 CTLGNLDHAMGVFELMNKKRCLPDNLT-YTALIHAHGKVKNWKVA 463
T GN+ A E N + P N T + L H NW+ A
Sbjct: 653 KTQGNVHLAQKAAE--NILKIDPFNSTAHVLLCSMHASSGNWENA 695
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 19/259 (7%)
Query: 167 SPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIEL 226
SP+ +R R + EA+ + +M V G KPDN F +L + Q E ++
Sbjct: 61 SPEWWIDLLRSKVRSNLLREAVLTYVDM-IVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 227 ALRIFHKMESPDTYSCGNTIVGFCR-LGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELC 285
++ D+ + NT+V R G GA ++F ++++ + + N LI LC
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE----RNQVSWNSLISSLC 175
Query: 286 SLSEKKGSVEKVRV---RNTRRPCTILVPNMGGNSGAIQP-----AVEVFWAVFNSGLLP 337
S + + ++E R N LV + S P +V G L
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL- 234
Query: 338 STFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLF 397
++F++ L++ +LG+ + LL R L + V+ +LC + Q+ EA
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVT----WNTVLSSLCQNEQLLEALEYL 290
Query: 398 GRMLACGLKPKLGVYNSVI 416
M+ G++P +SV+
Sbjct: 291 REMVLEGVEPDEFTISSVL 309
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 132/319 (41%), Gaps = 24/319 (7%)
Query: 175 IRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVLYVLCKKQSSEETIELALRIFHKM 234
+ GR G A + + M D + +N++L +K +E A +F +M
Sbjct: 182 VNVYGRSGYFEIARKVLDRMPV-----RDAVSWNSLLSAYLEKGLVDE----ARALFDEM 232
Query: 235 ESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAVNMLIGELCSLSEKKGSV 294
E + S I G+ G + A E+F M V+ + V C +E
Sbjct: 233 EERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGC-YNEVLEVF 291
Query: 295 EKVRVRNTRRP---CTILVPNMGGNSGAIQPAVEVFWAVFNSGLLPSTFVVVKLMSELCR 351
K+ +T +P + V + + G++ V + G+ F+ L+ +
Sbjct: 292 NKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSK 351
Query: 352 LGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEASNLFGRMLACGLKPKLGV 411
G+ ++A+++ R +R ++ + ++ L H ++A +F M+ G KP
Sbjct: 352 CGKIDKALEVFRATSKRDVST----WNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGIT 407
Query: 412 YNSVISMLCTLGNLDHAMGVFELMNK-KRCLPDNLTYTALIHAHGKVKNWKVAYDLLMEM 470
+ V+S +G LD A +FE+M+ R P Y ++ G++ + A +L+ E
Sbjct: 408 FIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNE- 466
Query: 471 LGLGWIPELQTYNLVDNLL 489
IP + L+++LL
Sbjct: 467 -----IPADEASILLESLL 480
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 143/362 (39%), Gaps = 41/362 (11%)
Query: 106 MSYQHL--GRAKTLNFFSWAGTQMGFQFDDSVVEYMADFLGRRKLFDDMKCLLMTVASQK 163
M+Y +L R N F W GF S MA +F DM C +V Q+
Sbjct: 74 MNYAYLVFTRINHKNPFVWNTIIRGFS--RSSFPEMA-----ISIFIDMLCSSPSVKPQR 126
Query: 164 GKVSPKAMSICIRFLGRHGRIHEALSLFEEMETVFGCKPDNLVFNNVL--YVLCKKQSSE 221
P + GR G+ + L M G + D+ + N +L YV C
Sbjct: 127 -LTYPSV----FKAYGRLGQARDGRQL-HGMVIKEGLEDDSFIRNTMLHMYVTCG----- 175
Query: 222 ETIELALRIFHKMESPDTYSCGNTIVGFCRLGRLGAALEIFSQMNKIGVLPTRSAV--NM 279
+ A RIF M D + + I+GF + G + A +F +M P R+ V N
Sbjct: 176 -CLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEM------PQRNGVSWNS 228
Query: 280 LIGELCSLSEKKGSVEKVRVRNTR--RP---CTILVPNMGGNSGAIQPAVEVFWAVFNSG 334
+I K +++ R + +P + + N GA + + + +
Sbjct: 229 MISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNR 288
Query: 335 LLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALCDHCQVEEAS 394
++ VV L+ C+ G EE + + +++L+C + ++ L ++ E A
Sbjct: 289 FELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSC----WNSMILGLANNGFEERAM 344
Query: 395 NLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCL-PDNLTYTALIHA 453
+LF + GL+P + V++ G + A F LM +K + P YT +++
Sbjct: 345 DLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNV 404
Query: 454 HG 455
G
Sbjct: 405 LG 406
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 93/225 (41%), Gaps = 15/225 (6%)
Query: 326 VFWAVFNSGLLPSTFVVVKLMSELCRLGQTEEAVKLLRIVEERKLTCVEEGYAIVMKALC 385
V+ + G P +M RLG+T+ +LL + + + Y I++ L
Sbjct: 244 VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLA 303
Query: 386 DHCQVEEASNLFGRMLACGLKPKLGVYNSVISMLCTLGNLDHAMGVFELMNKKRCLPDNL 445
+ A NL M G++P + + ++I L G L+ + K C PD +
Sbjct: 304 TGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVV 363
Query: 446 TYTALIHAHGKVKNWKVAYDLLMEMLGLGWIPELQTYN-LVDNLLREHDRSDLCLKLERK 504
YT +I + + A ++ EM G +P + TYN ++ + C L ++
Sbjct: 364 CYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEAC-ALLKE 422
Query: 505 LENHQ-----------LQKLCKLGQLDAAYEKAKSMLEKG--IHL 536
+E+ + L G++ A+E K M+EKG +HL
Sbjct: 423 MESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHL 467