Miyakogusa Predicted Gene

Lj0g3v0362219.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0362219.1 Non Chatacterized Hit- tr|I1MA46|I1MA46_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,82.54,0,OXIDASE/CHLOROPHYLL SYNTHASE,NULL; IRON-SULFUR DOMAIN
CONTAINING PROTEIN,NULL; coiled-coil,NULL; RIN,CUFF.24957.1
         (541 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G44446.1 | Symbols: CH1, ATCAO, CAO | Pheophorbide a oxygenas...   780   0.0  
AT1G44446.2 | Symbols: CH1, ATCAO, CAO | Pheophorbide a oxygenas...   693   0.0  
AT1G44446.3 | Symbols: CH1, ATCAO, CAO | Pheophorbide a oxygenas...   498   e-141
AT2G24820.1 | Symbols: TIC55-II | translocon at the inner envelo...    87   2e-17
AT3G44880.1 | Symbols: ACD1, LLS1, PAO | Pheophorbide a oxygenas...    60   4e-09
AT4G25650.1 | Symbols: ACD1-LIKE, PTC52, TIC55-IV | ACD1-like | ...    49   9e-06
AT4G25650.2 | Symbols: ACD1-LIKE, PTC52, TIC55-IV | ACD1-like | ...    49   9e-06

>AT1G44446.1 | Symbols: CH1, ATCAO, CAO | Pheophorbide a oxygenase
           family protein with Rieske [2Fe-2S] domain |
           chr1:16848664-16851152 REVERSE LENGTH=536
          Length = 536

 Score =  780 bits (2015), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/542 (69%), Positives = 439/542 (80%), Gaps = 20/542 (3%)

Query: 3   AIATASAPTLPI-FCRTSNT----KKGLKGKFRVFAVFGEE-----KRNPWGALFDVEDP 52
           A+ + SA +LPI F +T ++    KKG+KG+FRVFAVFG+E     K++ W  LFDVEDP
Sbjct: 4   AVFSPSALSLPISFSKTRSSFLSRKKGVKGEFRVFAVFGDESGLVEKKSQWRPLFDVEDP 63

Query: 53  RSKFPQLKGKFLNVYQALELARFDIQYCDWRARQDVLTIMLLHDKVVDFLNPLAREFNSI 112
           RSK P  KGKFL+V QA+E+ARFDIQY DWRARQD+LTIM+LHDKVVD LNPLARE+ SI
Sbjct: 64  RSKAPPYKGKFLDVNQAIEVARFDIQYLDWRARQDLLTIMILHDKVVDVLNPLAREYKSI 123

Query: 113 GTMKKXXXXXXXXXXDAHRQVHISEARVGTALDKLAYMEELVNDRLLQDRSTAEVAQTPS 172
           GT+KK           AH+QVHISEARV TALDKLA+MEELVNDRLL  R   E+ +   
Sbjct: 124 GTVKKELAGLQEELSKAHQQVHISEARVSTALDKLAHMEELVNDRLLPGRVVTELDK--- 180

Query: 173 LPSTSTKSEDIPSTSTKSGDIQRRRKPRKSLNISGPVQSYHPNLKNFWYPVAFSSGLKDD 232
            PS+ST      + S    D ++     KSLN+SGPV  Y P+LKNFWYPVAF++ LK D
Sbjct: 181 -PSSST------TASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNFWYPVAFTADLKHD 233

Query: 233 TMIPIECFEEPWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYTTDGK 292
           TM+PIECFE+PWVIFRG+DG+PGCV+NTCAHRACPL LG+VNEGRIQCPYHGWEY+TDG+
Sbjct: 234 TMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYHGWEYSTDGE 293

Query: 293 CEKMPSTRLLDVKIKSVPCFEKEGMIWIWPGXXXXXXXXXXXXXXXGFQIHAELVMELPV 352
           C+KMPST+LL VKIKS+PC E+EGMIWIWPG               GF IHAELVM+LPV
Sbjct: 294 CKKMPSTKLLKVKIKSLPCLEQEGMIWIWPGDEPPAPILPSLQPPSGFLIHAELVMDLPV 353

Query: 353 EHGXXXXXXXXXAHAPFTHTSTFAKGWTVPSMVKFLTPASGLQGYWDPYPIDMEFRPPCM 412
           EHG         AHAPFTHTSTFAKGW+VPS+VKFLTP SGLQGYWDPYPIDMEF+PPC+
Sbjct: 354 EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPTSGLQGYWDPYPIDMEFKPPCI 413

Query: 413 VLSTIGISKPGKLEGQSTKQCATHLHQLHVCLPSSKDKTRLLYRMSLDFAPLLKHIPFME 472
           VLSTIGISKPGKLEG+ST+QCATHLHQLHVCLPSSK+KTRLLYRMSLDFAP+LK++PFME
Sbjct: 414 VLSTIGISKPGKLEGKSTQQCATHLHQLHVCLPSSKNKTRLLYRMSLDFAPILKNLPFME 473

Query: 473 HLWRHFAEQVLNEDLRLVLGQQERMNNGANIWNFPVSYDKLGIRYRLWRDALESGARQLP 532
           HLWRHFAEQVLNEDLRLVLGQQERM NGANIWN PV+YDKLG+RYRLWR+A++ G  +LP
Sbjct: 474 HLWRHFAEQVLNEDLRLVLGQQERMLNGANIWNLPVAYDKLGVRYRLWRNAVDRGDDKLP 533

Query: 533 FT 534
           F+
Sbjct: 534 FS 535


>AT1G44446.2 | Symbols: CH1, ATCAO, CAO | Pheophorbide a oxygenase
           family protein with Rieske [2Fe-2S] domain |
           chr1:16848822-16851152 REVERSE LENGTH=511
          Length = 511

 Score =  693 bits (1788), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/490 (69%), Positives = 392/490 (80%), Gaps = 20/490 (4%)

Query: 3   AIATASAPTLPI-FCRTSNT----KKGLKGKFRVFAVFGEE-----KRNPWGALFDVEDP 52
           A+ + SA +LPI F +T ++    KKG+KG+FRVFAVFG+E     K++ W  LFDVEDP
Sbjct: 4   AVFSPSALSLPISFSKTRSSFLSRKKGVKGEFRVFAVFGDESGLVEKKSQWRPLFDVEDP 63

Query: 53  RSKFPQLKGKFLNVYQALELARFDIQYCDWRARQDVLTIMLLHDKVVDFLNPLAREFNSI 112
           RSK P  KGKFL+V QA+E+ARFDIQY DWRARQD+LTIM+LHDKVVD LNPLARE+ SI
Sbjct: 64  RSKAPPYKGKFLDVNQAIEVARFDIQYLDWRARQDLLTIMILHDKVVDVLNPLAREYKSI 123

Query: 113 GTMKKXXXXXXXXXXDAHRQVHISEARVGTALDKLAYMEELVNDRLLQDRSTAEVAQTPS 172
           GT+KK           AH+QVHISEARV TALDKLA+MEELVNDRLL  R   E+ +   
Sbjct: 124 GTVKKELAGLQEELSKAHQQVHISEARVSTALDKLAHMEELVNDRLLPGRVVTELDK--- 180

Query: 173 LPSTSTKSEDIPSTSTKSGDIQRRRKPRKSLNISGPVQSYHPNLKNFWYPVAFSSGLKDD 232
            PS+ST      + S    D ++     KSLN+SGPV  Y P+LKNFWYPVAF++ LK D
Sbjct: 181 -PSSST------TASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNFWYPVAFTADLKHD 233

Query: 233 TMIPIECFEEPWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYTTDGK 292
           TM+PIECFE+PWVIFRG+DG+PGCV+NTCAHRACPL LG+VNEGRIQCPYHGWEY+TDG+
Sbjct: 234 TMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYHGWEYSTDGE 293

Query: 293 CEKMPSTRLLDVKIKSVPCFEKEGMIWIWPGXXXXXXXXXXXXXXXGFQIHAELVMELPV 352
           C+KMPST+LL VKIKS+PC E+EGMIWIWPG               GF IHAELVM+LPV
Sbjct: 294 CKKMPSTKLLKVKIKSLPCLEQEGMIWIWPGDEPPAPILPSLQPPSGFLIHAELVMDLPV 353

Query: 353 EHGXXXXXXXXXAHAPFTHTSTFAKGWTVPSMVKFLTPASGLQGYWDPYPIDMEFRPPCM 412
           EHG         AHAPFTHTSTFAKGW+VPS+VKFLTP SGLQGYWDPYPIDMEF+PPC+
Sbjct: 354 EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPTSGLQGYWDPYPIDMEFKPPCI 413

Query: 413 VLSTIGISKPGKLEGQSTKQCATHLHQLHVCLPSSKDKTRLLYRMSLDFAPLLKHIPFME 472
           VLSTIGISKPGKLEG+ST+QCATHLHQLHVCLPSSK+KTRLLYRMSLDFAP+LK++PFME
Sbjct: 414 VLSTIGISKPGKLEGKSTQQCATHLHQLHVCLPSSKNKTRLLYRMSLDFAPILKNLPFME 473

Query: 473 HLWRHFAEQV 482
           HLWRHFAEQV
Sbjct: 474 HLWRHFAEQV 483


>AT1G44446.3 | Symbols: CH1, ATCAO, CAO | Pheophorbide a oxygenase
           family protein with Rieske [2Fe-2S] domain |
           chr1:16849132-16851152 REVERSE LENGTH=433
          Length = 433

 Score =  498 bits (1283), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 249/393 (63%), Positives = 294/393 (74%), Gaps = 20/393 (5%)

Query: 3   AIATASAPTLPI-FCRTSNT----KKGLKGKFRVFAVFGEE-----KRNPWGALFDVEDP 52
           A+ + SA +LPI F +T ++    KKG+KG+FRVFAVFG+E     K++ W  LFDVEDP
Sbjct: 4   AVFSPSALSLPISFSKTRSSFLSRKKGVKGEFRVFAVFGDESGLVEKKSQWRPLFDVEDP 63

Query: 53  RSKFPQLKGKFLNVYQALELARFDIQYCDWRARQDVLTIMLLHDKVVDFLNPLAREFNSI 112
           RSK P  KGKFL+V QA+E+ARFDIQY DWRARQD+LTIM+LHDKVVD LNPLARE+ SI
Sbjct: 64  RSKAPPYKGKFLDVNQAIEVARFDIQYLDWRARQDLLTIMILHDKVVDVLNPLAREYKSI 123

Query: 113 GTMKKXXXXXXXXXXDAHRQVHISEARVGTALDKLAYMEELVNDRLLQDRSTAEVAQTPS 172
           GT+KK           AH+QVHISEARV TALDKLA+MEELVNDRLL  R   E+ +   
Sbjct: 124 GTVKKELAGLQEELSKAHQQVHISEARVSTALDKLAHMEELVNDRLLPGRVVTELDK--- 180

Query: 173 LPSTSTKSEDIPSTSTKSGDIQRRRKPRKSLNISGPVQSYHPNLKNFWYPVAFSSGLKDD 232
            PS+ST      + S    D ++     KSLN+SGPV  Y P+LKNFWYPVAF++ LK D
Sbjct: 181 -PSSST------TASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNFWYPVAFTADLKHD 233

Query: 233 TMIPIECFEEPWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYTTDGK 292
           TM+PIECFE+PWVIFRG+DG+PGCV+NTCAHRACPL LG+VNEGRIQCPYHGWEY+TDG+
Sbjct: 234 TMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYHGWEYSTDGE 293

Query: 293 CEKMPSTRLLDVKIKSVPCFEKEGMIWIWPGXXXXXXXXXXXXXXXGFQIHAELVMELPV 352
           C+KMPST+LL VKIKS+PC E+EGMIWIWPG               GF IHAELVM+LPV
Sbjct: 294 CKKMPSTKLLKVKIKSLPCLEQEGMIWIWPGDEPPAPILPSLQPPSGFLIHAELVMDLPV 353

Query: 353 EHGXXXXXXXXXAHAPFTHTSTFAKGWTVPSMV 385
           EHG         AHAPFTHTSTFAKGW+VP  +
Sbjct: 354 EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPRFL 386


>AT2G24820.1 | Symbols: TIC55-II | translocon at the inner envelope
           membrane of chloroplasts 55-II | chr2:10575038-10576829
           FORWARD LENGTH=539
          Length = 539

 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/334 (23%), Positives = 135/334 (40%), Gaps = 39/334 (11%)

Query: 220 WYPVAFSSGLKDDTMIPIECFEEPWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQ 279
           WYP+  +  + +D  + +  ++   V+++  +G   C ++ C HR   L  G + +GR++
Sbjct: 88  WYPLYLTKNVPEDAPLGLTVYDRQIVLYKDGEGTLRCYEDRCPHRLAKLSEGQLIDGRLE 147

Query: 280 CPYHGWEYTTDGKCEKMPSTRLLDVKIKSVPCF------EKEGMIWIW-----PGXXXXX 328
           C YHGW++  +GKC K+P       KI    C       + +G++W+W     P      
Sbjct: 148 CLYHGWQFEGEGKCVKIPQLP-ASAKIPKAACVKTYEVKDSQGVVWVWMSTKTPPNPEKL 206

Query: 329 XXXXXXXXXXGFQIHAELVMELPVEHGXXXXXXXXXAHAPFTHTST--FAKGWTVPSMVK 386
                      F I      ELP +H          AH P +H  T   AK      +V 
Sbjct: 207 PWFENFARPGFFDIST--THELPYDHSILLENLMDPAHVPISHDRTDFTAKREDAQPLVF 264

Query: 387 FLTPAS--GLQGYWDPYPID------MEFRPPCMVLSTIGISKPGKLEGQSTKQCATHLH 438
            +T  S  G  G W            + F  PC++ +        + EG+   +   +  
Sbjct: 265 EVTERSNRGFAGTWGREKEGGKGSNLLRFDAPCVLQNN------REFEGKDGVK--NYFS 316

Query: 439 QLHVCLPSSKDKTRLLYRMSL-DFAPLLKHIPFMEHLWRHFAEQVLNEDLRLVLGQQERM 497
            L +C P+ + K+ L+ R  +   +PL+  +P  +  W   A +V  +D+  +  Q E +
Sbjct: 317 GLFLCRPTGQGKSMLIVRFGVTKRSPLVSVLP--QWFWHQNACKVFEQDMGFLSSQNEVL 374

Query: 498 NN----GANIWNFPVSYDKLGIRYRLWRDALESG 527
                   +++    S D     YR W D +  G
Sbjct: 375 MKEKVPTKDLYLNLKSSDTWVAEYRKWMDKVGHG 408


>AT3G44880.1 | Symbols: ACD1, LLS1, PAO | Pheophorbide a oxygenase
           family protein with Rieske [2Fe-2S] domain |
           chr3:16383858-16386204 FORWARD LENGTH=537
          Length = 537

 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 12/118 (10%)

Query: 217 KNFWYPVAFSSGLKDDTMIPIECFEEPWVI-FRGKDGRPGCVQNTCAHRACPLHLGSVNE 275
           ++ WYPV+    L  +   P +      V+ F   D +     + C HR  PL  G ++E
Sbjct: 85  RDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWFDRNDQKWAAFDDLCPHRLAPLSEGRLDE 144

Query: 276 -GRIQCPYHGWEYTTDGKCEKMPSTRLLDVKIKSV----------PCFEKEGMIWIWP 322
            G +QC YHGW +   G C ++P       + ++V          P    +G++++WP
Sbjct: 145 NGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVKSPRACAIKFPTMVSQGLLFVWP 202


>AT4G25650.1 | Symbols: ACD1-LIKE, PTC52, TIC55-IV | ACD1-like |
           chr4:13081021-13083153 REVERSE LENGTH=536
          Length = 536

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 9/76 (11%)

Query: 257 VQNTCAHRACPLHLGSVNE-GRIQCPYHGWEYTTDGKCEKMPST--------RLLDVKIK 307
           + +TC HR  PL  G +++ GR+QC YHGW +   G C+ +P                + 
Sbjct: 123 MDDTCPHRLAPLSDGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVA 182

Query: 308 SVPCFEKEGMIWIWPG 323
             P   +  +IW WP 
Sbjct: 183 VYPSTVQHEIIWFWPN 198


>AT4G25650.2 | Symbols: ACD1-LIKE, PTC52, TIC55-IV | ACD1-like |
           chr4:13081021-13083153 REVERSE LENGTH=559
          Length = 559

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 9/76 (11%)

Query: 257 VQNTCAHRACPLHLGSVNE-GRIQCPYHGWEYTTDGKCEKMPST--------RLLDVKIK 307
           + +TC HR  PL  G +++ GR+QC YHGW +   G C+ +P                + 
Sbjct: 123 MDDTCPHRLAPLSDGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVA 182

Query: 308 SVPCFEKEGMIWIWPG 323
             P   +  +IW WP 
Sbjct: 183 VYPSTVQHEIIWFWPN 198