Miyakogusa Predicted Gene

Lj0g3v0362029.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0362029.1 Non Chatacterized Hit- tr|G7II32|G7II32_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,32.84,7e-17,seg,NULL,CUFF.24939.1
         (221 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G16070.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    67   9e-12
AT3G24535.1 | Symbols:  | unknown protein; Has 28 Blast hits to ...    66   2e-11
AT1G15260.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    65   3e-11

>AT3G16070.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT1G15260.1); Has 26 Blast hits to 26 proteins in
           7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
           - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0
           (source: NCBI BLink). | chr3:5451864-5452316 REVERSE
           LENGTH=150
          Length = 150

 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 42/188 (22%)

Query: 10  TKKFFQKTVKNFKSLFSTGYQKLPKSPSHTPCSVSAMNAMDMNSNTSYHDMEKLYSDFSD 69
           T  FF +T+ + KS+     +KLP+  +H  C+    N++D ++         +Y+ F +
Sbjct: 5   TNSFFHRTLHSLKSIIIRAGKKLPRPKTHFSCTFCRSNSLDGDN---------IYASFLN 55

Query: 70  QXXXXXXXXXXXXXXXAAALPSPTQQENKVYNGSKKMQEGKTEEFAKKNNKRSLTLQSTK 129
                             ++  P + E+KV    +  Q  KTE  +  +++   T++   
Sbjct: 56  ----------IWESDLENSIEGPLKLEHKVQEQEQYHQVKKTEACSSYSSRDCDTME--- 102

Query: 130 QKDSSFNSMGMKEHRYFMVRQKLRELEMLDMSNEDHLMDIEEVLHYYSLLTCPVYLDIVD 189
                               +K+ E+ M +  + +  +D+EE LHYYS ++ PVYL+IVD
Sbjct: 103 --------------------KKINEMYMTETVDIEQALDVEEALHYYSRISSPVYLNIVD 142

Query: 190 RFFLEMYS 197
           +FF ++YS
Sbjct: 143 KFFTDLYS 150


>AT3G24535.1 | Symbols:  | unknown protein; Has 28 Blast hits to 27
           proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa
           - 0; Fungi - 2; Plants - 26; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr3:8952006-8952572 FORWARD LENGTH=188
          Length = 188

 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 54/221 (24%)

Query: 1   MLLRSSITSTKKFFQKTVKNFKSLF--STGYQKLPKSPSHTPCSVSAMNAMDMNSNTSYH 58
           M+LRSSI++T+K FQKT+ NFKS F  +  Y KLPK    TP + S       N N  + 
Sbjct: 1   MVLRSSISNTRKLFQKTIDNFKSFFFNNGTYHKLPK----TPNNTST------NINNDH- 49

Query: 59  DMEKLYSDFSDQXXXXXXXXXXXXXXXAAALPSPTQQENKVYNGSKKMQEGKTEEFAKKN 118
                                          P+     +   +  K+ Q  K +++   N
Sbjct: 50  -------------------------------PNSNIITSSSSSIHKQFQP-KPKDYVTTN 77

Query: 119 NKRSLTLQSTKQKDSSFNSMGMKEHRYFMVRQKLRELE-MLD---MSNEDHLMDIEEVLH 174
              SL  +   + ++ F+   +      +VR KL+E+E M++   +S+E ++ D+ E LH
Sbjct: 78  KASSLQPRIGDRDETLFSQPKVN-----LVRTKLKEMEKMMNDDIISDEYYVSDVIEFLH 132

Query: 175 YYSLLTCPVYLDIVDRFFLEMYSELSGPVLWPDTPRSVNSR 215
            YS L    YLD+V+ FF+E+YS+   P     T  +V  R
Sbjct: 133 CYSRLRYTAYLDVVENFFMEVYSDFFSPHHLVGTRTAVQRR 173


>AT1G15260.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT3G16070.1); Has 28 Blast hits to 28 proteins in
           7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
           - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0
           (source: NCBI BLink). | chr1:5249834-5250370 FORWARD
           LENGTH=178
          Length = 178

 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 37/53 (69%)

Query: 150 QKLRELEMLDMSNEDHLMDIEEVLHYYSLLTCPVYLDIVDRFFLEMYSELSGP 202
           QK+++L M+D+ + DH +D+ E L  YS +  PVYLDIVD FF +MY E S P
Sbjct: 108 QKMKDLNMVDLRDVDHALDVREALRCYSSIRSPVYLDIVDNFFTDMYYEFSDP 160