Miyakogusa Predicted Gene
- Lj0g3v0361629.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0361629.1 Non Chatacterized Hit- tr|H2LG32|H2LG32_ORYLA
Uncharacterized protein OS=Oryzias latipes GN=CDCA7L
P,30.24,8e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; zf-4CXXC_R1,Zinc-finger domain of monoami,gene.g28408.t1.1
(291 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G23530.1 | Symbols: | Zinc-finger domain of monoamine-oxidas... 206 1e-53
AT4G37110.1 | Symbols: | Zinc-finger domain of monoamine-oxidas... 193 1e-49
AT1G67780.1 | Symbols: | Zinc-finger domain of monoamine-oxidas... 83 3e-16
AT5G38690.1 | Symbols: | Zinc-finger domain of monoamine-oxidas... 74 9e-14
AT1G67270.1 | Symbols: | Zinc-finger domain of monoamine-oxidas... 74 9e-14
AT1G09060.2 | Symbols: | Zinc finger, RING-type;Transcription f... 55 4e-08
AT1G09060.1 | Symbols: | Zinc finger, RING-type;Transcription f... 55 4e-08
AT1G09060.3 | Symbols: | Zinc finger, RING-type;Transcription f... 55 4e-08
>AT2G23530.1 | Symbols: | Zinc-finger domain of monoamine-oxidase A
repressor R1 | chr2:10020652-10022804 REVERSE LENGTH=552
Length = 552
Score = 206 bits (525), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/226 (48%), Positives = 136/226 (60%), Gaps = 14/226 (6%)
Query: 26 KTEAEVSNYEQIRQQRIKENMERMHKLGLVDLSLXXXXXXXXXXXX------XXNVLPQH 79
K +VS YEQ R++RIKEN++RM+ LGL++LS N P
Sbjct: 23 KETPKVSLYEQCREERIKENLQRMNNLGLLNLSRKLKPKTRPVKRSYGNRNSVQNPTPP- 81
Query: 80 LSPQRRSSRIMSMEPVKYSYDSPRQKRDXXXXXXXXXXXVNIFIAEGTNPEVYTEEHEKL 139
L P RRSSR+ + PV Y+ D +K ++ I EG E+YTEEHEKL
Sbjct: 82 LQPSRRSSRLENTTPVIYT-DGINEKGKKASKRE------SVVIGEGIRAEIYTEEHEKL 134
Query: 140 LADYESTWELNVDGYDEDGDRIIDPTKGEKCHQCRHLTVGQFTTCNKCELPQGQLCGDCL 199
L + E +W VDGYD++G RI DP G+ CHQCR T+G T C++C L QGQ CGDCL
Sbjct: 135 LGNTERSWTCFVDGYDKNGKRIYDPFNGKTCHQCRQKTMGHRTQCSECNLVQGQFCGDCL 194
Query: 200 FTRYGENVLEANYNPNWTCPACRGICNCNSCRREKGWASTGNIYNK 245
F RYGE+VLEA NP+W CPACRGICNC+ CR KGW TG IY +
Sbjct: 195 FMRYGEHVLEALENPDWICPACRGICNCSLCRNNKGWVPTGPIYRR 240
>AT4G37110.1 | Symbols: | Zinc-finger domain of monoamine-oxidase A
repressor R1 | chr4:17484343-17486197 REVERSE LENGTH=417
Length = 417
Score = 193 bits (490), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/240 (43%), Positives = 135/240 (56%), Gaps = 29/240 (12%)
Query: 29 AEVSNYEQIRQQRIKENMERMHKLGLVDLSLXXXXXXXXXXXXXXN-------------- 74
+ VS YE+ R+ RIKEN++RM LG++DLSL N
Sbjct: 26 SNVSIYEKCREDRIKENLQRMKNLGIMDLSLKLKSEIRPAKRRYGNSNANPGRETSPIQL 85
Query: 75 --------VLPQHLSPQRRSSRIMSMEPVKYSYDSPRQKRDXXXXXXXXXXXVNIFIAEG 126
L Q RRSSR+ + PV Y+ + P K+ + +++ EG
Sbjct: 86 SVSSRRSSRLKQEPPVSRRSSRLKNATPVSYA-EEPELKK-----GKVSKEEIVLWVGEG 139
Query: 127 TNPEVYTEEHEKLLADYESTWELNVDGYDEDGDRIIDPTKGEKCHQCRHLTVGQFTTCNK 186
PE+YTEEHEKLL + E TWEL VDG D++G RI DP +G+ CHQCR T+G T C++
Sbjct: 140 VRPEIYTEEHEKLLGNTERTWELFVDGCDKNGKRIYDPVRGKCCHQCRQKTLGYHTQCSQ 199
Query: 187 CELP-QGQLCGDCLFTRYGENVLEANYNPNWTCPACRGICNCNSCRREKGWASTGNIYNK 245
C +GQ CGDCL+ RYGE+VLEA NP+W CP CR ICNC+ CR +KGW TG Y K
Sbjct: 200 CNHSVRGQFCGDCLYMRYGEHVLEALENPDWICPVCRDICNCSFCRTKKGWLPTGAAYRK 259
>AT1G67780.1 | Symbols: | Zinc-finger domain of monoamine-oxidase A
repressor R1 protein | chr1:25412816-25415530 FORWARD
LENGTH=512
Length = 512
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 158 GDRIIDPTKGEKCHQCRHLTVGQFTTCNKCELPQG---QLCGDCLFTRYGENVLEANYNP 214
G RI D + G+ CHQCR T+ +C + + C CL RYGEN E
Sbjct: 23 GGRIYDSSNGKTCHQCRQKTMDFVASCKAMKKDKQCTINFCHKCLINRYGENAEEVAKLD 82
Query: 215 NWTCPACRGICNCNSCRREKGWASTGNIYNKTRLSEKG-----LEDSGGENIVAEGSPE 268
+W CP CRGICNC+ CR+++G TG + +K + S LE G +N + P+
Sbjct: 83 DWICPQCRGICNCSFCRKKRGLNPTGILAHKAKASGLASVSMLLEVEGHDNFAYQKKPK 141
>AT5G38690.1 | Symbols: | Zinc-finger domain of monoamine-oxidase A
repressor R1 protein | chr5:15479424-15482992 REVERSE
LENGTH=572
Length = 572
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 160 RIIDPTKGEKCHQCRHL---TVGQFTTCNKCELPQGQLCGDCLFTRYGENVLEANYNPNW 216
RI D T G+ CHQCR VG T K + +LC C+ RYGEN E +W
Sbjct: 22 RIEDSTNGKTCHQCRQKRTDLVGSCVTKKKDKTCPIKLCTKCILNRYGENAQEVALKKDW 81
Query: 217 TCPACRGICNCNSCRREKGWASTGNIYNKTR 247
CP CRG CNC+ C +++G TG + + +
Sbjct: 82 ICPKCRGNCNCSYCMKKRGQKPTGILVHTAK 112
>AT1G67270.1 | Symbols: | Zinc-finger domain of monoamine-oxidase A
repressor R1 protein | chr1:25183177-25185793 REVERSE
LENGTH=541
Length = 541
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 158 GDRIIDPTKGEKCHQCRHLTVGQFTTCN---KCELPQGQLCGDCLFTRYGENVLEANYNP 214
G RI D G+ CHQCR T+ C + +L + C CL RYGEN E
Sbjct: 15 GKRIYDSQNGKSCHQCRQKTLDFAAPCKAMRRKKLCPIKFCYKCLSIRYGENAEEVAKLD 74
Query: 215 NWTCPACRGICNCNSCRREKGWASTGNIYNKTR 247
+W CP CRGIC C+ CR+ +G TG + ++ +
Sbjct: 75 DWICPLCRGICICSVCRKAQGLEPTGILAHEAK 107
>AT1G09060.2 | Symbols: | Zinc finger, RING-type;Transcription
factor jumonji/aspartyl beta-hydroxylase |
chr1:2921235-2925212 REVERSE LENGTH=930
Length = 930
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 167 GEKCHQCRHLTVGQFTTCNKCELPQGQLCGDCLFTRYGENVLEANYNPNWTCPACRGICN 226
GE CHQC+ + +C KC Q C +CL RY E LE CPACRG+C+
Sbjct: 203 GEICHQCQRKDRERIISCLKCN--QRAFCHNCLSARYSEISLEEVEK---VCPACRGLCD 257
Query: 227 CNSCRR 232
C SC R
Sbjct: 258 CKSCLR 263
>AT1G09060.1 | Symbols: | Zinc finger, RING-type;Transcription
factor jumonji/aspartyl beta-hydroxylase |
chr1:2921235-2925212 REVERSE LENGTH=930
Length = 930
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 167 GEKCHQCRHLTVGQFTTCNKCELPQGQLCGDCLFTRYGENVLEANYNPNWTCPACRGICN 226
GE CHQC+ + +C KC Q C +CL RY E LE CPACRG+C+
Sbjct: 203 GEICHQCQRKDRERIISCLKCN--QRAFCHNCLSARYSEISLEEVEK---VCPACRGLCD 257
Query: 227 CNSCRR 232
C SC R
Sbjct: 258 CKSCLR 263
>AT1G09060.3 | Symbols: | Zinc finger, RING-type;Transcription
factor jumonji/aspartyl beta-hydroxylase |
chr1:2921235-2925254 REVERSE LENGTH=944
Length = 944
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 167 GEKCHQCRHLTVGQFTTCNKCELPQGQLCGDCLFTRYGENVLEANYNPNWTCPACRGICN 226
GE CHQC+ + +C KC Q C +CL RY E LE CPACRG+C+
Sbjct: 217 GEICHQCQRKDRERIISCLKCN--QRAFCHNCLSARYSEISLEEVEK---VCPACRGLCD 271
Query: 227 CNSCRR 232
C SC R
Sbjct: 272 CKSCLR 277