Miyakogusa Predicted Gene

Lj0g3v0361469.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0361469.2 Non Chatacterized Hit- tr|I1N1E4|I1N1E4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,78.85,8e-17,no
description,NULL; P-loop containing nucleoside triphosphate
hydrolases,NULL; AAA_17,NULL; SHIKIMT,CUFF.24900.2
         (53 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G16790.2 | Symbols:  | P-loop containing nucleoside triphosph...    69   7e-13
AT2G16790.1 | Symbols:  | P-loop containing nucleoside triphosph...    67   3e-12

>AT2G16790.2 | Symbols:  | P-loop containing nucleoside
          triphosphate hydrolases superfamily protein |
          chr2:7284093-7284901 REVERSE LENGTH=187
          Length = 187

 Score = 68.9 bits (167), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/52 (65%), Positives = 40/52 (76%)

Query: 2  ASSNGAVIVIMGVSGAGKTTIGRRLEKETGYKFLDADDFHSQSNKEKMRIGI 53
          A ++G VI IMGVSGAGK+TIG+ L K     FLDADDFHS SN++KMR GI
Sbjct: 3  AKNDGKVIAIMGVSGAGKSTIGKMLGKALSCDFLDADDFHSLSNRDKMRQGI 54


>AT2G16790.1 | Symbols:  | P-loop containing nucleoside
          triphosphate hydrolases superfamily protein |
          chr2:7284093-7284901 REVERSE LENGTH=189
          Length = 189

 Score = 66.6 bits (161), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/48 (68%), Positives = 37/48 (77%)

Query: 6  GAVIVIMGVSGAGKTTIGRRLEKETGYKFLDADDFHSQSNKEKMRIGI 53
          G VI IMGVSGAGK+TIG+ L K     FLDADDFHS SN++KMR GI
Sbjct: 9  GKVIAIMGVSGAGKSTIGKMLGKALSCDFLDADDFHSLSNRDKMRQGI 56