Miyakogusa Predicted Gene

Lj0g3v0360969.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0360969.1 Non Chatacterized Hit- tr|K4A6K0|K4A6K0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si034505,40.14,0.0000000000002,seg,NULL; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL,CUFF.24863.1
         (364 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G37750.1 | Symbols: ANT, DRG, CKC, CKC1 | Integrase-type DNA-...   116   2e-26
AT1G72570.1 | Symbols:  | Integrase-type DNA-binding superfamily...   106   3e-23
AT3G20840.1 | Symbols: PLT1 | Integrase-type DNA-binding superfa...    97   1e-20
AT5G57390.1 | Symbols: AIL5, CHO1, EMK | AINTEGUMENTA-like 5 | c...    97   2e-20
AT5G17430.1 | Symbols: BBM | Integrase-type DNA-binding superfam...    96   3e-20
AT5G10510.2 | Symbols: AIL6 | AINTEGUMENTA-like 6 | chr5:3315991...    96   4e-20
AT1G51190.1 | Symbols: PLT2 | Integrase-type DNA-binding superfa...    96   5e-20
AT5G10510.3 | Symbols: AIL6 | AINTEGUMENTA-like 6 | chr5:3315991...    94   2e-19
AT5G10510.1 | Symbols: AIL6, PLT3 | AINTEGUMENTA-like 6 | chr5:3...    94   2e-19
AT5G65510.1 | Symbols: AIL7 | AINTEGUMENTA-like 7 | chr5:2618582...    93   3e-19
AT2G41710.1 | Symbols:  | Integrase-type DNA-binding superfamily...    67   2e-11
AT2G41710.2 | Symbols:  | Integrase-type DNA-binding superfamily...    67   2e-11
AT1G16060.1 | Symbols: ADAP | ARIA-interacting double AP2 domain...    67   2e-11
AT1G79700.1 | Symbols:  | Integrase-type DNA-binding superfamily...    67   3e-11
AT1G79700.2 | Symbols:  | Integrase-type DNA-binding superfamily...    67   3e-11
AT3G54320.1 | Symbols: WRI1, WRI, ASML1, ATWRI1 | Integrase-type...    60   3e-09
AT3G54320.3 | Symbols: WRI1, WRI, ASML1 | Integrase-type DNA-bin...    60   3e-09
AT2G41710.3 | Symbols:  | Integrase-type DNA-binding superfamily...    50   2e-06

>AT4G37750.1 | Symbols: ANT, DRG, CKC, CKC1 | Integrase-type
           DNA-binding superfamily protein | chr4:17739782-17742189
           FORWARD LENGTH=555
          Length = 555

 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 56/78 (71%), Positives = 62/78 (79%), Gaps = 3/78 (3%)

Query: 289 SASGTGTDSVAVEAKKRGSSKL---GQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEA 345
           ++ G  T ++A   KKRG   +   GQKQ VHRKSIDTFGQRTSQYRGVTRHRWTGRYEA
Sbjct: 239 TSVGFETTTMAAAKKKRGQEDVVVVGQKQIVHRKSIDTFGQRTSQYRGVTRHRWTGRYEA 298

Query: 346 HLWDNSCKKEGQTRKGRQ 363
           HLWDNS KKEG +RKGRQ
Sbjct: 299 HLWDNSFKKEGHSRKGRQ 316



 Score = 78.2 bits (191), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 44/98 (44%), Positives = 59/98 (60%), Gaps = 8/98 (8%)

Query: 69  SHSGICYGVGENSPFHYSPLAMMPLKSDGSLCIMEALTRSQTQVMVPTSSPKLEDFLGGA 128
           S+ G+CYG   N    YS +++MPL+SDGSLC+MEAL RS        SSPK+EDF G  
Sbjct: 65  SNFGVCYGSNPNGGI-YSHMSVMPLRSDGSLCLMEALNRSSHSNHHQDSSPKVEDFFG-- 121

Query: 129 TMEAQEYGGHDEREAMALSLDSIYYNHHNAEPDANRDF 166
                 +     +EAM LSLDS++YN  + EP+   +F
Sbjct: 122 ----THHNNTSHKEAMDLSLDSLFYNTTH-EPNTTTNF 154


>AT1G72570.1 | Symbols:  | Integrase-type DNA-binding superfamily
           protein | chr1:27331381-27333698 FORWARD LENGTH=415
          Length = 415

 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 52/84 (61%), Positives = 63/84 (75%), Gaps = 1/84 (1%)

Query: 281 CVTVPSQISASGTGTDSVAV-EAKKRGSSKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRW 339
           C  + ++ + S    + V V E +KR   K   K+ V RKS+D++GQRTSQYRGVTRHRW
Sbjct: 173 CSDLINESNVSARVEEPVKVDEKRKRLVVKPQVKESVPRKSVDSYGQRTSQYRGVTRHRW 232

Query: 340 TGRYEAHLWDNSCKKEGQTRKGRQ 363
           TGRYEAHLWDNSCKKEGQTR+GRQ
Sbjct: 233 TGRYEAHLWDNSCKKEGQTRRGRQ 256


>AT3G20840.1 | Symbols: PLT1 | Integrase-type DNA-binding
           superfamily protein | chr3:7300764-7303370 FORWARD
           LENGTH=574
          Length = 574

 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 39/46 (84%), Positives = 45/46 (97%)

Query: 318 RKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 363
           R+++DTFGQRTS YRGVTRHRWTGRYEAHLWDNSC++EGQ+RKGRQ
Sbjct: 169 RRALDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ 214


>AT5G57390.1 | Symbols: AIL5, CHO1, EMK | AINTEGUMENTA-like 5 |
           chr5:23253459-23256437 REVERSE LENGTH=558
          Length = 558

 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 38/54 (70%), Positives = 48/54 (88%)

Query: 310 LGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 363
           + +  P  +K++++FGQRTS YRGVTRHRWTGRYEAHLWDNSC++EGQ+RKGRQ
Sbjct: 183 VSEASPTPKKNVESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ 236


>AT5G17430.1 | Symbols: BBM | Integrase-type DNA-binding superfamily
           protein | chr5:5742542-5745568 REVERSE LENGTH=584
          Length = 584

 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 40/46 (86%), Positives = 45/46 (97%)

Query: 318 RKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 363
           +K+I++FGQRTS YRGVTRHRWTGRYEAHLWDNSCK+EGQTRKGRQ
Sbjct: 198 KKTIESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCKREGQTRKGRQ 243


>AT5G10510.2 | Symbols: AIL6 | AINTEGUMENTA-like 6 |
           chr5:3315991-3320008 FORWARD LENGTH=581
          Length = 581

 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 40/48 (83%), Positives = 44/48 (91%)

Query: 317 HRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQG 364
           ++K  DTFGQRTS YRGVTRHRWTGRYEAHLWDNSC++EGQ RKGRQG
Sbjct: 255 NKKIADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQG 302


>AT1G51190.1 | Symbols: PLT2 | Integrase-type DNA-binding
           superfamily protein | chr1:18977517-18980305 FORWARD
           LENGTH=568
          Length = 568

 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 38/46 (82%), Positives = 45/46 (97%)

Query: 318 RKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 363
           R++++TFGQRTS YRGVTRHRWTGRYEAHLWDNSC++EGQ+RKGRQ
Sbjct: 178 RRTLETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ 223


>AT5G10510.3 | Symbols: AIL6 | AINTEGUMENTA-like 6 |
           chr5:3315991-3320008 FORWARD LENGTH=604
          Length = 604

 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 39/47 (82%), Positives = 43/47 (91%)

Query: 317 HRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 363
           ++K  DTFGQRTS YRGVTRHRWTGRYEAHLWDNSC++EGQ RKGRQ
Sbjct: 255 NKKIADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQ 301


>AT5G10510.1 | Symbols: AIL6, PLT3 | AINTEGUMENTA-like 6 |
           chr5:3316036-3320008 FORWARD LENGTH=569
          Length = 569

 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 39/47 (82%), Positives = 43/47 (91%)

Query: 317 HRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 363
           ++K  DTFGQRTS YRGVTRHRWTGRYEAHLWDNSC++EGQ RKGRQ
Sbjct: 240 NKKIADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQ 286


>AT5G65510.1 | Symbols: AIL7 | AINTEGUMENTA-like 7 |
           chr5:26185829-26189413 FORWARD LENGTH=498
          Length = 498

 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 41/61 (67%), Positives = 47/61 (77%)

Query: 303 KKRGSSKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGR 362
           KK+  SK        +K ++T GQRTS YRGVTRHRWTGRYEAHLWDNSC++EGQ RKGR
Sbjct: 204 KKKTVSKKETSDDSKKKIVETLGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGR 263

Query: 363 Q 363
           Q
Sbjct: 264 Q 264


>AT2G41710.1 | Symbols:  | Integrase-type DNA-binding superfamily
           protein | chr2:17400274-17402903 REVERSE LENGTH=423
          Length = 423

 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/41 (68%), Positives = 33/41 (80%)

Query: 323 TFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 363
           T G+R+S YRGVTRHRWTGRYEAHLWD S   + Q +KG+Q
Sbjct: 63  TAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQ 103


>AT2G41710.2 | Symbols:  | Integrase-type DNA-binding superfamily
           protein | chr2:17400274-17402903 REVERSE LENGTH=428
          Length = 428

 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/41 (68%), Positives = 33/41 (80%)

Query: 323 TFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 363
           T G+R+S YRGVTRHRWTGRYEAHLWD S   + Q +KG+Q
Sbjct: 63  TAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQ 103


>AT1G16060.1 | Symbols: ADAP | ARIA-interacting double AP2 domain
           protein | chr1:5508563-5511609 FORWARD LENGTH=345
          Length = 345

 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 14/75 (18%)

Query: 293 TGTD----SVAVEAKKRGSSKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLW 348
           TG D    SV ++AK++  S+     P          QR+S +RGVTRHRWTGRYEAHLW
Sbjct: 27  TGDDQSATSVVLKAKRKRRSQPRDAPP----------QRSSVHRGVTRHRWTGRYEAHLW 76

Query: 349 DNSCKKEGQTRKGRQ 363
           D +   E QT+KGRQ
Sbjct: 77  DKNSWNETQTKKGRQ 91


>AT1G79700.1 | Symbols:  | Integrase-type DNA-binding superfamily
           protein | chr1:29990440-29993658 REVERSE LENGTH=303
          Length = 303

 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 39/57 (68%), Gaps = 4/57 (7%)

Query: 307 SSKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 363
           +SK  +K P     +    QR+S YRGVTRHRWTGRYEAHLWD +   + QT+KGRQ
Sbjct: 33  TSKRKRKSPPRNAPL----QRSSPYRGVTRHRWTGRYEAHLWDKNSWNDTQTKKGRQ 85


>AT1G79700.2 | Symbols:  | Integrase-type DNA-binding superfamily
           protein | chr1:29990440-29993658 REVERSE LENGTH=313
          Length = 313

 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 39/57 (68%), Gaps = 4/57 (7%)

Query: 307 SSKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 363
           +SK  +K P     +    QR+S YRGVTRHRWTGRYEAHLWD +   + QT+KGRQ
Sbjct: 33  TSKRKRKSPPRNAPL----QRSSPYRGVTRHRWTGRYEAHLWDKNSWNDTQTKKGRQ 85


>AT3G54320.1 | Symbols: WRI1, WRI, ASML1, ATWRI1 | Integrase-type
           DNA-binding superfamily protein | chr3:20114809-20118599
           FORWARD LENGTH=438
          Length = 438

 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/38 (65%), Positives = 30/38 (78%)

Query: 326 QRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 363
           +R+S YRGVTRHRWTGR+EAHLWD S     Q +KG+Q
Sbjct: 61  RRSSIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGKQ 98


>AT3G54320.3 | Symbols: WRI1, WRI, ASML1 | Integrase-type
           DNA-binding superfamily protein | chr3:20114809-20118473
           FORWARD LENGTH=430
          Length = 430

 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/38 (65%), Positives = 30/38 (78%)

Query: 326 QRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 363
           +R+S YRGVTRHRWTGR+EAHLWD S     Q +KG+Q
Sbjct: 61  RRSSIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGKQ 98


>AT2G41710.3 | Symbols:  | Integrase-type DNA-binding superfamily
           protein | chr2:17400274-17402903 REVERSE LENGTH=458
          Length = 458

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/30 (63%), Positives = 24/30 (80%)

Query: 334 VTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 363
           ++RHRWTGRYEAHLWD S   + Q +KG+Q
Sbjct: 109 MSRHRWTGRYEAHLWDKSTWNQNQNKKGKQ 138