Miyakogusa Predicted Gene

Lj0g3v0360399.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0360399.1 Non Chatacterized Hit- tr|I1MJR8|I1MJR8_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,77.88,0,Thiamin
diphosphate-binding fold (THDP-binding),NULL; DHS-like NAD/FAD-binding
domain,NULL; no descr,CUFF.24809.1
         (839 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G68890.1 | Symbols:  | magnesium ion binding;thiamin pyrophos...   913   0.0  
AT1G18870.2 | Symbols: ICS2 | isochorismate synthase 2 | chr1:65...    77   5e-14
AT1G18870.1 | Symbols: ICS2, ATICS2 | isochorismate synthase 2 |...    77   6e-14
AT1G74710.1 | Symbols: EDS16, ICS1, SID2, ATICS1 | ADC synthase ...    75   3e-13
AT1G74710.2 | Symbols: EDS16, ICS1, SID2 | ADC synthase superfam...    74   5e-13
AT3G48560.1 | Symbols: CSR1, ALS, AHAS, TZP5, IMR1 | chlorsulfur...    55   2e-07

>AT1G68890.1 | Symbols:  | magnesium ion binding;thiamin
           pyrophosphate
           binding;hydro-lyases;catalytics;2-succinyl-5-
           enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid
           synthases | chr1:25896988-25906553 FORWARD LENGTH=1715
          Length = 1715

 Score =  913 bits (2360), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/806 (57%), Positives = 591/806 (73%), Gaps = 14/806 (1%)

Query: 37  GVRRTSVRVEAAGGVRFDGPVPLNGDVE-ENEVVFEHCVTRTLPPALTLQDGLDKLKEAL 95
           G+RR    +E A GV+FDGP+ ++ DV  ++++V + CVTRTLPPALTL+ GL+ LKEA+
Sbjct: 46  GIRRN---IEVAQGVQFDGPI-MDRDVNLDDDLVVQVCVTRTLPPALTLELGLESLKEAI 101

Query: 96  EMLKVAPPRCSAGFLRFQVAVPPSPKALSWFCCQPESSGVFPLIYLSKDTDNPTCKSLYV 155
           + LK  PP+ S+G LRFQVAVPP  KAL WFC QP +S VFP+ +LSKDT  P+ KSLYV
Sbjct: 102 DELKTNPPKSSSGVLRFQVAVPPRAKALFWFCSQPTTSDVFPVFFLSKDTVEPSYKSLYV 161

Query: 156 NGSRGVFGIGAAVSFAHSSD---GKQSLIKRYISTDSTHIVAYGFMDISLDDGLVSVSHE 212
               GVFGIG A +F HSS       S+IK ++S +S  + AYGF DI  +    +V+ +
Sbjct: 162 KEPHGVFGIGNAFAFVHSSSVDSNGHSMIKTFLSDESAMVTAYGFPDIEFNK-YSTVNSK 220

Query: 213 DGSFCFFIPQIELDELESVSILTMTLAWGDFSFSTFEDSCHLLEVSLNQVICHVWSPTGL 272
           DGS  FF+PQIELDE E VSIL +TLAW +    T E +    E S+ QV  H       
Sbjct: 221 DGSSYFFVPQIELDEHEEVSILAVTLAWNESLSYTVEQTISSYEKSIFQVSSHFCPNVED 280

Query: 273 GKSKCIRAALRKLNLVEDRSIPRVYINDIAPGGRESVGDIMELKESPFSSQFCVRLSATL 332
              K ++++L KL++ E   +   ++      GR+   D+ ELK    S QF  +LS  +
Sbjct: 281 HWFKHLKSSLAKLSVEEIHPLEMEHMGFFTFSGRDQ-ADVKELKSIQSSCQFHCKLSPDV 339

Query: 333 AVSNNMLDHASELSHSLNESANINAVWASLIIEECTRLGLMYFCVAPGSRSSPLAVAAAS 392
             SNNML+  +E+S+ L + ANINAVWAS IIEECTRLGL YFCVAPGSRSS LA+AAA+
Sbjct: 340 VFSNNMLNRETEVSNFLRDEANINAVWASAIIEECTRLGLTYFCVAPGSRSSHLAIAAAN 399

Query: 393 HNLITCVSCFDERSLAFHAIGYGRGSHIPAVVITSSGTAVSNLLPAVVEASQDFVPLILL 452
           H L TC++CFDERSLAFHAIGY +GS  PAV+ITSSGTAVSNLLPAVVEAS+DF+PL+LL
Sbjct: 400 HPLTTCLACFDERSLAFHAIGYAKGSLKPAVIITSSGTAVSNLLPAVVEASEDFLPLLLL 459

Query: 453 TADRPPELLDCGANQAIDQVNHFGSFVRFFFNLPAPTDQIPAKIVLTTLDSAVNRATSSP 512
           TADRPPEL   GANQAI+Q+NHFGSFVRFFFNLP PTD IP ++VLTT+DSA++ AT S 
Sbjct: 460 TADRPPELQGVGANQAINQINHFGSFVRFFFNLPPPTDLIPVRMVLTTVDSALHWATGSA 519

Query: 513 CGPVHINCPFREPLESSPLKWLSSCLKGLDYWMSNAEPFTKYIHMRFSDTSMNAPDEMIE 572
           CGPVH+NCPFR+PL+ SP  W S+CL GLD WMSNAEPFTKY  ++   +      ++ E
Sbjct: 520 CGPVHLNCPFRDPLDGSPTNWSSNCLNGLDMWMSNAEPFTKYFQVQSHKSDGVTTGQITE 579

Query: 573 VLNLIQGAKNCLLLFGAIHTEDEMWAALLLAKHLQWPVVADILSGLRLRKLLTSLPDIER 632
           +L +I+ AK  LLL GAIHTEDE+WA+LLLAK L WPVVAD+LSG+RLRKL    P +E+
Sbjct: 580 ILQVIKEAKKGLLLIGAIHTEDEIWASLLLAKELMWPVVADVLSGVRLRKLFK--PFVEK 637

Query: 633 -NFIFVDNLDHALLSESVKDWVKIDVVIQIGSRITSKRICQIIEECAPFSYIMVDKHPLR 691
              +FVD+LDHAL S+SV++ ++ DVVIQ+GSRITSKR+ Q++E+C PF+YI+VDKHP R
Sbjct: 638 LTHVFVDHLDHALFSDSVRNLIEFDVVIQVGSRITSKRVSQMLEKCFPFAYILVDKHPCR 697

Query: 692 HDPSHIVTHRIQATIFDFVSCLLKDTVPYTRSMWSTSLQLLSKMVGWQIHFQIAAECSLT 751
           HDPSH+VTHR+Q+ I  F +C+LK   P+ RS     LQ L   +  ++ FQI+AE SLT
Sbjct: 698 HDPSHLVTHRVQSNIVQFANCVLKSRFPWRRSKLHGHLQALDGAIAREMSFQISAESSLT 757

Query: 752 EPYVAHVISEALSPESALFLGNSMPIRDADIYGCSWSVCRPSVPSLMLNSDLPINLVRVA 811
           EPYVAH++S+AL+ +SALF+GNSMPIRD D+YGCS S     V  +ML+++LP   ++V 
Sbjct: 758 EPYVAHMLSKALTSKSALFIGNSMPIRDVDMYGCS-SENSSHVVDMMLSAELPCQWIQVT 816

Query: 812 ANRGASGIDGLLSTAIGFAVGCNKKV 837
            NRGASGIDGLLS+A GFAVGC K+V
Sbjct: 817 GNRGASGIDGLLSSATGFAVGCKKRV 842


>AT1G18870.2 | Symbols: ICS2 | isochorismate synthase 2 |
           chr1:6515746-6519176 FORWARD LENGTH=512
          Length = 512

 Score = 77.0 bits (188), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 104/218 (47%), Gaps = 19/218 (8%)

Query: 59  LNGDVEENEVVFEHCVTRTLPPALTLQDGLDKLKEALEMLKVAPPRCSAGFLRFQVAVPP 118
           +NG   +++       TRTL    +     ++L  A+  LK  PP  S+G +R QV +  
Sbjct: 1   MNGCEADHKAPLGTVETRTLSTVPSPAAATERLITAVSDLKSQPPPFSSGIVRLQVPIEQ 60

Query: 119 SPKALSWFCCQPESSGVFPLIYLSKDTDNPTCKSLYV----NGSR-----GVFGIGAAVS 169
              A+ W   Q E   + P  + S+ +D+     L      NGS       V GIG+AV 
Sbjct: 61  KIGAIDWLHAQNE---ILPRSFFSRRSDSGRPDLLQDFSSDNGSSDHNPVSVAGIGSAVF 117

Query: 170 FAH----SSDGKQSLIKRYISTDSTHIVAYGFMDISLDDGLVSVSHED-GSFCFFIPQIE 224
           F      S D  +S I+R++S+ S  I AYG +      G ++V  E  GSF F +PQ+E
Sbjct: 118 FRDLDPFSHDDWRS-IRRFLSSKSPLIRAYGGLRFD-PTGKIAVEWEHFGSFYFTVPQVE 175

Query: 225 LDELESVSILTMTLAWGDFSFSTFEDSCHLLEVSLNQV 262
            DE    S+L  T+AW +    T E++   L+ ++ QV
Sbjct: 176 FDEFGGSSMLAATVAWDNELSWTLENAIEALQETMLQV 213


>AT1G18870.1 | Symbols: ICS2, ATICS2 | isochorismate synthase 2 |
           chr1:6515486-6519176 FORWARD LENGTH=562
          Length = 562

 Score = 76.6 bits (187), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 104/218 (47%), Gaps = 19/218 (8%)

Query: 59  LNGDVEENEVVFEHCVTRTLPPALTLQDGLDKLKEALEMLKVAPPRCSAGFLRFQVAVPP 118
           +NG   +++       TRTL    +     ++L  A+  LK  PP  S+G +R QV +  
Sbjct: 51  MNGCEADHKAPLGTVETRTLSTVPSPAAATERLITAVSDLKSQPPPFSSGIVRLQVPIEQ 110

Query: 119 SPKALSWFCCQPESSGVFPLIYLSKDTDNPTCKSLYV----NGSR-----GVFGIGAAVS 169
              A+ W   Q E   + P  + S+ +D+     L      NGS       V GIG+AV 
Sbjct: 111 KIGAIDWLHAQNE---ILPRSFFSRRSDSGRPDLLQDFSSDNGSSDHNPVSVAGIGSAVF 167

Query: 170 FAH----SSDGKQSLIKRYISTDSTHIVAYGFMDISLDDGLVSVSHED-GSFCFFIPQIE 224
           F      S D  +S I+R++S+ S  I AYG +      G ++V  E  GSF F +PQ+E
Sbjct: 168 FRDLDPFSHDDWRS-IRRFLSSKSPLIRAYGGLRFD-PTGKIAVEWEHFGSFYFTVPQVE 225

Query: 225 LDELESVSILTMTLAWGDFSFSTFEDSCHLLEVSLNQV 262
            DE    S+L  T+AW +    T E++   L+ ++ QV
Sbjct: 226 FDEFGGSSMLAATVAWDNELSWTLENAIEALQETMLQV 263


>AT1G74710.1 | Symbols: EDS16, ICS1, SID2, ATICS1 | ADC synthase
           superfamily protein | chr1:28070391-28073898 FORWARD
           LENGTH=569
          Length = 569

 Score = 74.7 bits (182), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 27/210 (12%)

Query: 75  TRTLPPALTLQDGLDKLKEALEMLKVAPPRCSAGFLRFQVAVPPSPKALSWFCCQPESSG 134
           TRT+   L+     ++L  A+  LK  PP  S+G +R QV +     A+ W   Q E   
Sbjct: 64  TRTMTAVLSPAAATERLISAVSELKSQPPSFSSGVVRLQVPIDQQIGAIDWLQAQNE--- 120

Query: 135 VFPLIYLSKDTD--------------NPTCKSLYVNGSRG---VFGIGAAVSFAH----S 173
           + P  + S+ +D                   +  V+  R    V GIG+AV F      S
Sbjct: 121 IQPRCFFSRRSDVGRPDLLLDLANENGNGNGNGTVSSDRNLVSVAGIGSAVFFRDLDPFS 180

Query: 174 SDGKQSLIKRYISTDSTHIVAYGFMDISLDDGLVSVSHED-GSFCFFIPQIELDELESVS 232
            D  +S I+R++S+ S  I AYG M     +G ++V  E  G+F F +PQ+E +E    S
Sbjct: 181 HDDWRS-IRRFLSSTSPLIRAYGGMRFD-PNGKIAVEWEPFGAFYFSVPQVEFNEFGGSS 238

Query: 233 ILTMTLAWGDFSFSTFEDSCHLLEVSLNQV 262
           +L  T+AW D    T E++   L+ ++ QV
Sbjct: 239 MLAATIAWDDELSWTLENAIEALQETMLQV 268


>AT1G74710.2 | Symbols: EDS16, ICS1, SID2 | ADC synthase superfamily
           protein | chr1:28070391-28073962 FORWARD LENGTH=622
          Length = 622

 Score = 73.6 bits (179), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 27/210 (12%)

Query: 75  TRTLPPALTLQDGLDKLKEALEMLKVAPPRCSAGFLRFQVAVPPSPKALSWFCCQPESSG 134
           TRT+   L+     ++L  A+  LK  PP  S+G +R QV +     A+ W   Q E   
Sbjct: 64  TRTMTAVLSPAAATERLISAVSELKSQPPSFSSGVVRLQVPIDQQIGAIDWLQAQNE--- 120

Query: 135 VFPLIYLSKDTD--------------NPTCKSLYVNGSRG---VFGIGAAVSFAH----S 173
           + P  + S+ +D                   +  V+  R    V GIG+AV F      S
Sbjct: 121 IQPRCFFSRRSDVGRPDLLLDLANENGNGNGNGTVSSDRNLVSVAGIGSAVFFRDLDPFS 180

Query: 174 SDGKQSLIKRYISTDSTHIVAYGFMDISLDDGLVSVSHED-GSFCFFIPQIELDELESVS 232
            D  +S I+R++S+ S  I AYG M     +G ++V  E  G+F F +PQ+E +E    S
Sbjct: 181 HDDWRS-IRRFLSSTSPLIRAYGGMRFD-PNGKIAVEWEPFGAFYFSVPQVEFNEFGGSS 238

Query: 233 ILTMTLAWGDFSFSTFEDSCHLLEVSLNQV 262
           +L  T+AW D    T E++   L+ ++ QV
Sbjct: 239 MLAATIAWDDELSWTLENAIEALQETMLQV 268


>AT3G48560.1 | Symbols: CSR1, ALS, AHAS, TZP5, IMR1 |
           chlorsulfuron/imidazolinone resistant 1 |
           chr3:18001530-18003542 REVERSE LENGTH=670
          Length = 670

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 6/162 (3%)

Query: 360 ASLIIEECTRLGLMYFCVAPGSRSSPLAVAAASHNLITCVSCFDERSLAFHAIGYGRGSH 419
           A +++E   R G+      PG  S  +  A    + I  V    E+   F A GY R S 
Sbjct: 100 ADILVEALERQGVETVFAYPGGASMEIHQALTRSSSIRNVLPRHEQGGVFAAEGYARSSG 159

Query: 420 IPAVVITSSGTAVSNLLPAVVEASQDFVPLILLTADRPPELLDCGANQAIDQVNHFGSFV 479
            P + I +SG   +NL+  + +A  D VPL+ +T   P  ++   A Q    V    S  
Sbjct: 160 KPGICIATSGPGATNLVSGLADALLDSVPLVAITGQVPRRMIGTDAFQETPIVEVTRSIT 219

Query: 480 RFFFNLPAPTDQIPAKIVLTTLDSAVNRATSSPCGPVHINCP 521
           +  + L    + IP       ++ A   ATS   GPV ++ P
Sbjct: 220 KHNY-LVMDVEDIP-----RIIEEAFFLATSGRPGPVLVDVP 255