Miyakogusa Predicted Gene

Lj0g3v0359769.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0359769.2 Non Chatacterized Hit- tr|I1KNT0|I1KNT0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56401
PE,84.49,0,FAD/NAD(P)-binding domain,NULL; no description,NULL;
SUBFAMILY NOT NAMED,NULL; PHYTOENE DEHYDROGENAS,CUFF.24762.2
         (565 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G57770.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase fami...   842   0.0  
AT1G06820.1 | Symbols: CRTISO, CCR2 | carotenoid isomerase | chr...   186   5e-47

>AT1G57770.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase family
           protein | chr1:21395254-21398135 FORWARD LENGTH=574
          Length = 574

 Score =  842 bits (2174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/523 (77%), Positives = 448/523 (85%)

Query: 43  EADVVVIGSXXXXXXXXXXXXRYEQNVLVLESHDLPGGAAHSFDIKGYKFDSGPSLFSGL 102
           EADVVVIGS            RY+Q+V+VLESHD PGGAAHSF+IKGYKFDSGPSLFSGL
Sbjct: 52  EADVVVIGSGIGGLCCGALLARYDQDVIVLESHDHPGGAAHSFEIKGYKFDSGPSLFSGL 111

Query: 103 QSRGPQANPLAQVLDALGESLPCATYDSWKVYLPEGEFLSRIGPTEFSKDLEKYGGPNAV 162
           QSRGPQANPLAQVLDALGES PC  YDSW VYLPEG+FLSRIGPT+F KDLEKY GP+AV
Sbjct: 112 QSRGPQANPLAQVLDALGESFPCKKYDSWMVYLPEGDFLSRIGPTDFFKDLEKYAGPSAV 171

Query: 163 QEWRKLLDAVLPLSTAAMALPPLSIRGDLGVLYTAAARYAPSLFKSFVQMGPQGALGATK 222
           QEW KLL A+LPLS+AAMALPPLSIRGDLGVL TAAARYAPSL KSF++MGP+GALGATK
Sbjct: 172 QEWEKLLGAILPLSSAAMALPPLSIRGDLGVLSTAAARYAPSLLKSFIKMGPKGALGATK 231

Query: 223 LLRPFKEILDGLELKDPFLRNWIDLLSFLLAGVKTDGILAAEMIYMFAEWYKPGCCLEYP 282
           LLRPF EI+D LELKDPF+RNWIDLL+FLLAGVK+DGIL+AEMIYMFAEWYKPGC LEYP
Sbjct: 232 LLRPFSEIVDSLELKDPFIRNWIDLLAFLLAGVKSDGILSAEMIYMFAEWYKPGCTLEYP 291

Query: 283 LDGTAAIVDALVRGLEKFGGRVSLQSHAEKIVVENDRAIGVKLRSGQFIRAKKAVVSNAS 342
           +DGT A+V+ALVRGLEKFGGR+SL+SH E IV+EN +A+GVKLR+GQF+RA+KAVVSNAS
Sbjct: 292 IDGTGAVVEALVRGLEKFGGRLSLKSHVENIVIENGKAVGVKLRNGQFVRARKAVVSNAS 351

Query: 343 TWDTLKLLPNEAVPKSYSDRINTTPQCESFMHLHLGFDAEDIPSDLGIHHIVVNDWKRGV 402
            WDTLKLLP  A+P+SY   +NTTPQCESFMHLHLGFDAE I  DL IHHIVVNDW RGV
Sbjct: 352 MWDTLKLLPPGALPESYVKGVNTTPQCESFMHLHLGFDAEGIADDLEIHHIVVNDWDRGV 411

Query: 403 DADQXXXXXXXXXXXXXXXAPPGKHVLHAYLPGTEPYELWEGLDRKSAEYRNLKAERSEV 462
           DADQ               APPGKHVLHAY PGTEP+ LWEGLDR+SAEY+NLK++RSEV
Sbjct: 412 DADQNVVLISVPSVLSPNLAPPGKHVLHAYCPGTEPFGLWEGLDRRSAEYKNLKSQRSEV 471

Query: 463 LWRAVEKALGPGFNREKCEVKLVGSPLTHQRFLRRNRGTYGPAVQAGKETFPGHSTPIPQ 522
           +WRAVE+ALG GF REKCEV LVG+PLTHQRFLRRNRGTYGPA++AGK TFPGHSTPIPQ
Sbjct: 472 MWRAVERALGLGFKREKCEVSLVGTPLTHQRFLRRNRGTYGPAIEAGKGTFPGHSTPIPQ 531

Query: 523 LYCCGDSTFPGIGVPAVAASGAIVANXXXXXXXXXXXXEAIGI 565
           L CCGDSTFPGIGVPAVAASGAIVAN            +AIG+
Sbjct: 532 LLCCGDSTFPGIGVPAVAASGAIVANSLVPVSKHSQLLDAIGL 574


>AT1G06820.1 | Symbols: CRTISO, CCR2 | carotenoid isomerase |
           chr1:2093145-2096220 REVERSE LENGTH=595
          Length = 595

 Score =  186 bits (471), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 154/518 (29%), Positives = 234/518 (45%), Gaps = 45/518 (8%)

Query: 45  DVVVIGSXXXXXXXXXXXXRYEQNVLVLESHDLPGGAAHSFDIKGYKFDSGPSLFSGLQS 104
           D +VIGS              E  VLVLE + +PGG++  ++  GY FD G S+  G   
Sbjct: 79  DAIVIGSGIGGLVAATQLAVKEARVLVLEKYLIPGGSSGFYERDGYTFDVGSSVMFGFSD 138

Query: 105 RGPQANPLAQVLDALG---ESLPCATYDSWKVYLPEG-------EFLSRIGPTEFSKDLE 154
           +G   N + Q L A+G   E +P  T  +   +LP         E+   I         E
Sbjct: 139 KG-NLNLITQALKAVGRKMEVIPDPT--TVHFHLPNNLSVRIHREYDDFIAELTSKFPHE 195

Query: 155 KYGGPNAVQEWRKLLDAVLPLSTAAMALPPLSIRGDLGVLYTAAARYAPSLFKSFVQMGP 214
           K G      +  K+ +++  L   ++  P          +Y         LF  F Q  P
Sbjct: 196 KEGILGFYGDCWKIFNSLNSLELKSLEEP----------IY---------LFGQFFQK-P 235

Query: 215 QGALGATKLLRPFKEILDGLELKDPFLRNWIDLLSFLLAGVKTDGILAAEMIYMFAEWYK 274
              L     L      +    +KDP L ++ID   F+++ V            +  + + 
Sbjct: 236 LECLTLAYYLPQNAGAIARKYIKDPQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHY 295

Query: 275 PGCCLEYPLDGTAAIVDALVRGLEKFGGRVSLQSHAEKIVVENDRAIGVKLRSGQFIRAK 334
            G  + YP+ G   I  +L  GL   G  +  +++ + I++++ +A+GV+L  G+   AK
Sbjct: 296 GG--INYPVGGVGGIAKSLAEGLVDQGSEIQYKANVKSIILDHGKAVGVRLADGREFFAK 353

Query: 335 KAVVSNASTWDTL-KLLPNEAVPKSYSDRINTTPQCESFMHLHLGFDAEDIPSDLGIHHI 393
             ++SNA+ WDT  KLL  E +PK   +      +  SF+ +H+G  AE +P D   HH 
Sbjct: 354 -TIISNATRWDTFGKLLKGEKLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHF 412

Query: 394 VVNDWKRGVDADQXXXXXXXXXXXXXXXAPPGKHVLHAYLPGTEPYELWEGLDRKSAEYR 453
           V+ D  + ++                  AP G+H+LH +   T   E WEGL  K  EY 
Sbjct: 413 VLEDDWKNLEEPYGSIFLSIPTILDSSLAPDGRHILHIFT--TSSIEDWEGLPPK--EYE 468

Query: 454 NLKAERSEVLWRAVEKALGPGFNREKCEVKLVGSPLTHQRFLRRNRGTYGP---AVQAGK 510
             K + +  + + +EK L PG +      K VG+P TH+RFL R++GTYGP       G 
Sbjct: 469 AKKEDVAARIIQRLEKKLFPGLS-SSITFKEVGTPRTHRRFLARDKGTYGPMPRGTPKGL 527

Query: 511 ETFPGHSTPIPQLYCCGDSTFPGIGVPAVAASGAIVAN 548
              P ++T I  LYC GDS FPG GV AVA SG + A+
Sbjct: 528 LGMPFNTTAIDGLYCVGDSCFPGQGVIAVAFSGVMCAH 565