Miyakogusa Predicted Gene

Lj0g3v0359259.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0359259.1 tr|B9GU61|B9GU61_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_754603 PE=4
SV=1,54.41,0.0000000001,zf-RING_2,Zinc finger, RING-type; no
description,Zinc finger, RING/FYVE/PHD-type; RING/U-box,NULL;
s,CUFF.24718.1
         (343 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G60360.1 | Symbols:  | RING/U-box superfamily protein | chr1:...    72   8e-13
AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364...    68   1e-11
AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364...    68   1e-11
AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364...    68   1e-11
AT3G19950.1 | Symbols:  | RING/U-box superfamily protein | chr3:...    64   1e-10
AT3G56580.3 | Symbols:  | RING/U-box superfamily protein | chr3:...    64   1e-10
AT3G56580.1 | Symbols:  | RING/U-box superfamily protein | chr3:...    64   1e-10
AT3G56580.2 | Symbols:  | RING/U-box superfamily protein | chr3:...    64   1e-10
AT3G10815.1 | Symbols:  | RING/U-box superfamily protein | chr3:...    63   2e-10
AT5G08139.1 | Symbols:  | RING/U-box superfamily protein | chr5:...    60   2e-09
AT1G55530.1 | Symbols:  | RING/U-box superfamily protein | chr1:...    59   5e-09
AT5G60820.1 | Symbols:  | RING/U-box superfamily protein | chr5:...    57   1e-08
AT1G68180.1 | Symbols:  | RING/U-box superfamily protein | chr1:...    57   2e-08
AT3G46620.1 | Symbols:  | zinc finger (C3HC4-type RING finger) f...    57   2e-08
AT3G02340.1 | Symbols:  | RING/U-box superfamily protein | chr3:...    57   2e-08
AT1G49850.1 | Symbols:  | RING/U-box superfamily protein | chr1:...    55   7e-08
AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein | chr5:75...    55   8e-08
AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein ...    54   1e-07
AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein ...    54   1e-07
AT5G15820.1 | Symbols:  | RING/U-box superfamily protein | chr5:...    54   1e-07
AT4G21070.1 | Symbols: ATBRCA1, BRCA1 | breast cancer susceptibi...    54   2e-07
AT1G18770.1 | Symbols:  | RING/U-box superfamily protein | chr1:...    53   2e-07
AT5G53910.1 | Symbols:  | RING/U-box superfamily protein | chr5:...    53   3e-07
AT5G02750.1 | Symbols:  | RING/U-box superfamily protein | chr5:...    52   4e-07
AT5G59550.1 | Symbols:  | zinc finger (C3HC4-type RING finger) f...    52   4e-07
AT3G30460.1 | Symbols:  | RING/U-box superfamily protein | chr3:...    52   7e-07
AT2G39720.1 | Symbols: RHC2A | RING-H2 finger C2A | chr2:1656750...    52   7e-07
AT3G60080.1 | Symbols:  | RING/U-box superfamily protein | chr3:...    52   8e-07
AT1G18760.1 | Symbols:  | Zinc finger, C3HC4 type (RING finger) ...    51   1e-06
AT5G52140.1 | Symbols:  | RING/U-box superfamily protein | chr5:...    51   1e-06
AT5G10650.2 | Symbols:  | RING/U-box superfamily protein | chr5:...    50   2e-06
AT5G10650.1 | Symbols:  | RING/U-box superfamily protein | chr5:...    50   2e-06
AT5G64920.1 | Symbols: CIP8 | COP1-interacting protein 8 | chr5:...    50   2e-06
AT2G29840.1 | Symbols:  | RING/U-box superfamily protein | chr2:...    50   3e-06
AT5G24870.2 | Symbols:  | RING/U-box superfamily protein | chr5:...    50   3e-06
AT5G24870.1 | Symbols:  | RING/U-box superfamily protein | chr5:...    50   3e-06
AT3G19910.1 | Symbols:  | RING/U-box superfamily protein | chr3:...    49   3e-06
AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein | ...    49   3e-06
AT3G13430.3 | Symbols:  | RING/U-box superfamily protein | chr3:...    49   4e-06
AT3G13430.2 | Symbols:  | RING/U-box superfamily protein | chr3:...    49   4e-06
AT3G13430.1 | Symbols:  | RING/U-box superfamily protein | chr3:...    49   4e-06
AT2G44330.1 | Symbols:  | RING/U-box superfamily protein | chr2:...    49   5e-06
AT5G54990.1 | Symbols:  | RING/U-box superfamily protein | chr5:...    49   6e-06
AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:1771336...    49   6e-06
AT4G26400.1 | Symbols:  | RING/U-box superfamily protein | chr4:...    48   9e-06
AT4G26400.2 | Symbols:  | RING/U-box superfamily protein | chr4:...    48   9e-06

>AT1G60360.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:22242748-22243731 REVERSE LENGTH=327
          Length = 327

 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 2/70 (2%)

Query: 152 DSVINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNN 211
           +  IN++  V+I+  H   +MS C +CMEE  VG  A  LPC H Y  +CI+ WLRL+N 
Sbjct: 201 EPTINSLPSVKITPQHLTNDMSQCTVCMEEFIVGGDATELPCKHIYHKDCIVPWLRLNN- 259

Query: 212 KTCPVCRLQL 221
            +CP+CR  L
Sbjct: 260 -SCPICRRDL 268


>AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A |
           chr2:17043642-17044628 FORWARD LENGTH=328
          Length = 328

 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 2/69 (2%)

Query: 153 SVINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNK 212
           S I+A+  ++I++ H R   S+CP+C +E ++G +A  +PC H Y S+CI+ WL   N  
Sbjct: 168 SAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHN-- 225

Query: 213 TCPVCRLQL 221
           +CPVCR +L
Sbjct: 226 SCPVCRQEL 234


>AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A |
           chr2:17043642-17044628 FORWARD LENGTH=328
          Length = 328

 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 2/69 (2%)

Query: 153 SVINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNK 212
           S I+A+  ++I++ H R   S+CP+C +E ++G +A  +PC H Y S+CI+ WL   N  
Sbjct: 168 SAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHN-- 225

Query: 213 TCPVCRLQL 221
           +CPVCR +L
Sbjct: 226 SCPVCRQEL 234


>AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A |
           chr2:17043642-17044628 FORWARD LENGTH=328
          Length = 328

 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 2/69 (2%)

Query: 153 SVINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNK 212
           S I+A+  ++I++ H R   S+CP+C +E ++G +A  +PC H Y S+CI+ WL   N  
Sbjct: 168 SAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHN-- 225

Query: 213 TCPVCRLQL 221
           +CPVCR +L
Sbjct: 226 SCPVCRQEL 234


>AT3G19950.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:6942853-6943839 FORWARD LENGTH=328
          Length = 328

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 2/69 (2%)

Query: 153 SVINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNK 212
           S I+A+  V++++   + EM+ C +CM+E + G     +PC H +  +C+L WL L N  
Sbjct: 194 SAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHN-- 251

Query: 213 TCPVCRLQL 221
           +CPVCR +L
Sbjct: 252 SCPVCRFEL 260


>AT3G56580.3 | Symbols:  | RING/U-box superfamily protein |
           chr3:20962563-20963525 FORWARD LENGTH=320
          Length = 320

 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 2/69 (2%)

Query: 153 SVINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNK 212
           S I+A+  ++I++ H +   SHCP+C +E ++  +A  +PC H Y S+CI+ WL   N  
Sbjct: 164 SSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHN-- 221

Query: 213 TCPVCRLQL 221
           +CPVCR +L
Sbjct: 222 SCPVCRKEL 230


>AT3G56580.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:20962563-20963525 FORWARD LENGTH=320
          Length = 320

 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 2/69 (2%)

Query: 153 SVINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNK 212
           S I+A+  ++I++ H +   SHCP+C +E ++  +A  +PC H Y S+CI+ WL   N  
Sbjct: 164 SSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHN-- 221

Query: 213 TCPVCRLQL 221
           +CPVCR +L
Sbjct: 222 SCPVCRKEL 230


>AT3G56580.2 | Symbols:  | RING/U-box superfamily protein |
           chr3:20962563-20963525 FORWARD LENGTH=320
          Length = 320

 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 2/69 (2%)

Query: 153 SVINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNK 212
           S I+A+  ++I++ H +   SHCP+C +E ++  +A  +PC H Y S+CI+ WL   N  
Sbjct: 164 SSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHN-- 221

Query: 213 TCPVCRLQL 221
           +CPVCR +L
Sbjct: 222 SCPVCRKEL 230


>AT3G10815.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:3385009-3385608 REVERSE LENGTH=199
          Length = 199

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 5/78 (6%)

Query: 153 SVINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNK 212
           + IN++ K++I + H  G   +CP+C ++ ++G  A  +PC H Y SECIL WL   N  
Sbjct: 100 AAINSLQKIKIRQKHL-GLDPYCPVCQDQFEIGSDARKMPCKHIYHSECILPWLVQRN-- 156

Query: 213 TCPVCRLQLEGWEDHGNS 230
           TCPVCR +L   +D  NS
Sbjct: 157 TCPVCRKELP--QDRNNS 172


>AT5G08139.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:2616487-2617617 FORWARD LENGTH=376
          Length = 376

 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 34/47 (72%), Gaps = 2/47 (4%)

Query: 175 CPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNKTCPVCRLQL 221
           C +C +E+ +G++A  LPC H Y SECI+ WL++ N  TCPVCR +L
Sbjct: 309 CAVCKDEMNIGNKAVQLPCNHKYHSECIVPWLKVRN--TCPVCRYEL 353


>AT1G55530.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:20729472-20730527 REVERSE LENGTH=351
          Length = 351

 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 10/88 (11%)

Query: 150 VQDSVINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLS 209
            +   + A+  V+I E  +      C +C+++ ++G +A L+PCTH + S+C+L WL L 
Sbjct: 204 AKKEAVEALATVKIEETLQ------CSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLEL- 256

Query: 210 NNKTCPVCRLQLEGWEDHGNSHSIDETA 237
            + +CPVCR QL    D   + S+  T+
Sbjct: 257 -HSSCPVCRYQLPA--DEAKTDSVTTTS 281


>AT5G60820.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:24469636-24470895 FORWARD LENGTH=419
          Length = 419

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 8/70 (11%)

Query: 158 IHKVRISELHRRGEMSH------CPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNN 211
           I  +++S L     M +      C +C EE+ VG +   LPC H Y SECI+ WL + N 
Sbjct: 349 IKNLKVSPLSNEDVMENDDDAVCCAVCKEEMIVGKEVAELPCRHKYHSECIVPWLGIRN- 407

Query: 212 KTCPVCRLQL 221
            TCPVCR +L
Sbjct: 408 -TCPVCRFEL 416


>AT1G68180.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:25554816-25555562 FORWARD LENGTH=248
          Length = 248

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 8/91 (8%)

Query: 153 SVINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNK 212
           S I A+  V I++     E   C IC EE +VG++   L C H Y S CI+ WL + N  
Sbjct: 117 SAIEAVRTVIITDEDLVKEKV-CAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHN-- 173

Query: 213 TCPVCRLQL-----EGWEDHGNSHSIDETAS 238
           TCP+CR ++     E   D G S++ID   S
Sbjct: 174 TCPICRFEVNLGVSESNVDEGGSYNIDNDRS 204


>AT3G46620.1 | Symbols:  | zinc finger (C3HC4-type RING finger)
           family protein | chr3:17178837-17180024 REVERSE
           LENGTH=395
          Length = 395

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 3/69 (4%)

Query: 153 SVINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNK 212
           S I ++ +V IS+ H + E ++C +C E  + G +   +PC H +  +CI+ WL + N  
Sbjct: 194 SAIESLPRVEISDCHTKAE-ANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRN-- 250

Query: 213 TCPVCRLQL 221
           +CPVCR +L
Sbjct: 251 SCPVCRFEL 259


>AT3G02340.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:477032-478261 FORWARD LENGTH=409
          Length = 409

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 2/69 (2%)

Query: 153 SVINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNK 212
           SVI  +  V ++        + C +C +E+ V ++   LPC+HFY  ECI+ WL + N  
Sbjct: 313 SVIQDLPVVELAVEELDKGNNVCAVCKDEMLVEEKVRRLPCSHFYHGECIIPWLGIRN-- 370

Query: 213 TCPVCRLQL 221
           TCPVCR +L
Sbjct: 371 TCPVCRYEL 379


>AT1G49850.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:18455326-18456444 REVERSE LENGTH=250
          Length = 250

 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 149 MVQDSVINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRL 208
           + QD+ IN +H+   S    + EM  C IC+E    GD    LPCTH + S C+  WLR 
Sbjct: 178 LTQDA-INCLHRQTFSSAEVKSEMRDCSICLESFTKGDMLISLPCTHSFHSSCLNPWLRA 236

Query: 209 SNNKTCPVCR 218
             +  CP CR
Sbjct: 237 CGD--CPCCR 244


>AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein |
           chr5:7565374-7570871 REVERSE LENGTH=1029
          Length = 1029

 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 3/56 (5%)

Query: 163 ISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNKTCPVCR 218
           + E  R+GE   CPIC+E +   + A L PC H  C EC+L   R S +  CPVCR
Sbjct: 782 VVEELRKGEQGECPICLEAL---EDAVLTPCAHRLCRECLLASWRNSTSGLCPVCR 834


>AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein |
           chr3:23456407-23457787 REVERSE LENGTH=248
          Length = 248

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)

Query: 168 RRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNKTCPVCRLQLEG 223
           R+     C IC  + K+G++   LPC H Y SECI +WL +  NK CPVC  ++ G
Sbjct: 190 RKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSI--NKVCPVCNSEVFG 243


>AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein |
           chr3:23456407-23457787 REVERSE LENGTH=248
          Length = 248

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)

Query: 168 RRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNKTCPVCRLQLEG 223
           R+     C IC  + K+G++   LPC H Y SECI +WL +  NK CPVC  ++ G
Sbjct: 190 RKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSI--NKVCPVCNSEVFG 243


>AT5G15820.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:5161787-5162833 FORWARD LENGTH=348
          Length = 348

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)

Query: 153 SVINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNK 212
           SV++ +  V ++          C IC +EV   ++   LPC H+Y  ECI+ WL + N  
Sbjct: 269 SVVDGLPDVELTIEELSSVSIVCAICKDEVVFKEKVKRLPCKHYYHGECIIPWLGIRN-- 326

Query: 213 TCPVCRLQL 221
           TCPVCR +L
Sbjct: 327 TCPVCRHEL 335


>AT4G21070.1 | Symbols: ATBRCA1, BRCA1 | breast cancer
           susceptibility1 | chr4:11248174-11252633 FORWARD
           LENGTH=941
          Length = 941

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 15/98 (15%)

Query: 164 SELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNKTCPVCRLQLEG 223
           S L R G    CPIC+    + + A  L C H +C+ CI++ +++  + TCPVC++    
Sbjct: 5   SHLERMGRELKCPICLS---LYNSAVSLSCNHVFCNACIVKSMKM--DATCPVCKIPYHR 59

Query: 224 WEDHGNSHSID---------ETASAWDFFGHQNLPPPS 252
            E  G  H +D         E AS    F  QN P PS
Sbjct: 60  REIRGAPH-MDSLVSIYKNMEDASGIKLFVSQNNPSPS 96


>AT1G18770.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:6473370-6474048 REVERSE LENGTH=106
          Length = 106

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 7/75 (9%)

Query: 147 SVMVQDSVINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWL 206
           S +V  S+   I+K+  S     GEM  C IC+EE   G +   LPC H +  EC+L+W 
Sbjct: 36  SKLVVKSLARKIYKMTTSS---TGEM--CIICLEEFSEGRRVVTLPCGHDFDDECVLKWF 90

Query: 207 RLSNNKTCPVCRLQL 221
               N +CP+CR +L
Sbjct: 91  E--TNHSCPLCRFKL 103


>AT5G53910.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:21890643-21891335 FORWARD LENGTH=230
          Length = 230

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)

Query: 161 VRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNKTCPVCRLQ 220
           +R  E +  GE   C IC +E K G +   L C H + ++CI++W ++  N  CP+CR +
Sbjct: 159 MRKRETYSSGEYK-CAICFQEFKTGREVATLLCGHEFDNKCIMEWFKVRYN--CPLCRFE 215

Query: 221 LEGWEDHGNSHSID 234
           L   +DH    + D
Sbjct: 216 LPREDDHIPQRTTD 229


>AT5G02750.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:620101-620952 FORWARD LENGTH=283
          Length = 283

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 28/47 (59%), Gaps = 2/47 (4%)

Query: 175 CPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNKTCPVCRLQL 221
           C IC EE+  G   C +PC HF+  +CIL W  LS   TCP CR QL
Sbjct: 214 CVICKEEMSEGRDVCEMPCQHFFHWKCILPW--LSKKNTCPFCRFQL 258


>AT5G59550.1 | Symbols:  | zinc finger (C3HC4-type RING finger)
           family protein | chr5:23998422-23999645 REVERSE
           LENGTH=407
          Length = 407

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 3/69 (4%)

Query: 153 SVINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNK 212
           S I ++ +V IS+ H  G  ++C +C E  +   +A  +PC H +  +CI+ WL + N  
Sbjct: 178 SAIESLPRVEISDCHI-GSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRN-- 234

Query: 213 TCPVCRLQL 221
           +CPVCR +L
Sbjct: 235 SCPVCRFEL 243


>AT3G30460.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:12104433-12104876 FORWARD LENGTH=147
          Length = 147

 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)

Query: 165 ELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNKTCPVCRLQLE 222
           E+  RG +  C IC EE+   ++   LPC H+Y  ECI  W  LSN  TCP+CR  +E
Sbjct: 88  EMMERG-LVVCAICREELAANERLSELPCRHYYHKECISNW--LSNRNTCPLCRHNVE 142


>AT2G39720.1 | Symbols: RHC2A | RING-H2 finger C2A |
           chr2:16567506-16568711 REVERSE LENGTH=401
          Length = 401

 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 153 SVINAIHKVRISELHRRGE-MSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNN 211
           S I A+  + I   H   +  SHC +C E   +   A  +PC H Y  +CIL WL + N 
Sbjct: 178 SAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRN- 236

Query: 212 KTCPVCRLQL 221
            +CPVCR +L
Sbjct: 237 -SCPVCRHEL 245


>AT3G60080.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:22187635-22188555 FORWARD LENGTH=306
          Length = 306

 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 2/47 (4%)

Query: 175 CPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNKTCPVCRLQL 221
           C +C E+  +G+ A  LPC+H Y S+CI+ W  LS++ +CP+CR +L
Sbjct: 169 CAVCKEDFIIGESARRLPCSHIYHSDCIVPW--LSDHNSCPLCRFEL 213


>AT1G18760.1 | Symbols:  | Zinc finger, C3HC4 type (RING finger)
           family protein | chr1:6471150-6471824 REVERSE LENGTH=224
          Length = 224

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 8/73 (10%)

Query: 149 MVQDSVINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRL 208
           +V +S+   I+K   S   R      C IC+EE   G +   LPC H +  EC+L W   
Sbjct: 155 LVVNSLARKIYKKTTSSTER------CTICLEEFNDGTKVMTLPCGHEFDDECVLTWFE- 207

Query: 209 SNNKTCPVCRLQL 221
             N  CP+CR +L
Sbjct: 208 -TNHDCPLCRFKL 219


>AT5G52140.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:21184566-21186872 REVERSE LENGTH=280
          Length = 280

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)

Query: 173 SHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNKTCPVCRLQL 221
           S C IC+ E   GD+   LPC H Y  +CI QWL+   NK C +C+ ++
Sbjct: 232 SQCSICLMEYAKGDKITTLPCKHIYHKDCISQWLK--QNKVCCICKAEV 278


>AT5G10650.2 | Symbols:  | RING/U-box superfamily protein |
           chr5:3365237-3367263 REVERSE LENGTH=525
          Length = 525

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 175 CPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNKTCPVCRLQLE 222
           C IC EE   GD+   +PC H Y   C+ QWLR+ N   CP+C+   E
Sbjct: 475 CSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKN--WCPICKTSAE 520


>AT5G10650.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:3365237-3367263 REVERSE LENGTH=525
          Length = 525

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 175 CPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNKTCPVCRLQLE 222
           C IC EE   GD+   +PC H Y   C+ QWLR+ N   CP+C+   E
Sbjct: 475 CSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKN--WCPICKTSAE 520


>AT5G64920.1 | Symbols: CIP8 | COP1-interacting protein 8 |
           chr5:25944338-25945342 REVERSE LENGTH=334
          Length = 334

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 5/71 (7%)

Query: 153 SVINAIHKVRISELHRRGEMSH-CPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNN 211
           S I A+    +S     GEM   C +C + + +G+    LPC H Y  +CI+ WL   N 
Sbjct: 236 SAIEALETFEVSS--SEGEMVMVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRN- 292

Query: 212 KTCPVCRLQLE 222
            +CPVCR QLE
Sbjct: 293 -SCPVCRFQLE 302


>AT2G29840.1 | Symbols:  | RING/U-box superfamily protein |
           chr2:12732387-12733983 REVERSE LENGTH=293
          Length = 293

 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 11/71 (15%)

Query: 160 KVRISELHRR---------GEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSN 210
           K+ +  L+R+         GE   C IC+EE   G     LPC H +  EC L+W     
Sbjct: 220 KLAVESLNRKTYKKASDVVGENEMCSICLEEFDDGRSIVALPCGHEFDDECALKWFE--T 277

Query: 211 NKTCPVCRLQL 221
           N  CP+CR +L
Sbjct: 278 NHDCPLCRFKL 288


>AT5G24870.2 | Symbols:  | RING/U-box superfamily protein |
           chr5:8545008-8546923 REVERSE LENGTH=520
          Length = 520

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 174 HCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNKTCPVCRLQLE 222
            C IC EE   GD+   LPC H Y   C  QWLR+ N   CP+C+   E
Sbjct: 467 KCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKN--WCPICKTSAE 513


>AT5G24870.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:8545008-8546923 REVERSE LENGTH=520
          Length = 520

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 174 HCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNKTCPVCRLQLE 222
            C IC EE   GD+   LPC H Y   C  QWLR+ N   CP+C+   E
Sbjct: 467 KCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKN--WCPICKTSAE 513


>AT3G19910.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:6926497-6929324 FORWARD LENGTH=340
          Length = 340

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 167 HRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNKTCPVCRLQL 221
           ++ G    C IC  + +  +   LLPC H Y SECI  WL++  NK CPVC  ++
Sbjct: 280 NQNGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKI--NKVCPVCSAEV 332


>AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein |
           chr3:20595300-20597188 REVERSE LENGTH=273
          Length = 273

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)

Query: 175 CPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNKTCPVCRLQLE-GWEDHGNSHSI 233
           C +C+E+V VG+    LPC H + + CI  WLR     TCPVC+ +   GW++      I
Sbjct: 211 CSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLR--QQGTCPVCKFRAHSGWQEQDE---I 265

Query: 234 DETAS 238
           D+ AS
Sbjct: 266 DDDAS 270


>AT3G13430.3 | Symbols:  | RING/U-box superfamily protein |
           chr3:4367754-4368701 FORWARD LENGTH=315
          Length = 315

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 7/73 (9%)

Query: 154 VINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNKT 213
            + A+  V+I +      +  C +C+++ ++G +A  +PC H + S+C+L WL L  + +
Sbjct: 209 AVEALAMVKIED-----SLLQCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLEL--HSS 261

Query: 214 CPVCRLQLEGWED 226
           CPVCR  L   +D
Sbjct: 262 CPVCRYLLPTGDD 274


>AT3G13430.2 | Symbols:  | RING/U-box superfamily protein |
           chr3:4367754-4368701 FORWARD LENGTH=315
          Length = 315

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 7/73 (9%)

Query: 154 VINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNKT 213
            + A+  V+I +      +  C +C+++ ++G +A  +PC H + S+C+L WL L  + +
Sbjct: 209 AVEALAMVKIED-----SLLQCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLEL--HSS 261

Query: 214 CPVCRLQLEGWED 226
           CPVCR  L   +D
Sbjct: 262 CPVCRYLLPTGDD 274


>AT3G13430.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:4367754-4368701 FORWARD LENGTH=315
          Length = 315

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 7/73 (9%)

Query: 154 VINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNKT 213
            + A+  V+I +      +  C +C+++ ++G +A  +PC H + S+C+L WL L  + +
Sbjct: 209 AVEALAMVKIED-----SLLQCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLEL--HSS 261

Query: 214 CPVCRLQLEGWED 226
           CPVCR  L   +D
Sbjct: 262 CPVCRYLLPTGDD 274


>AT2G44330.1 | Symbols:  | RING/U-box superfamily protein |
           chr2:18310621-18311163 FORWARD LENGTH=180
          Length = 180

 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 2/47 (4%)

Query: 175 CPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNKTCPVCRLQL 221
           C IC E+  VG+ A  LPC H Y ++CI+ W  L+++ +CP+CR++L
Sbjct: 96  CAICREDFVVGESARRLPCNHLYHNDCIIPW--LTSHNSCPLCRVEL 140


>AT5G54990.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:22317505-22318185 FORWARD LENGTH=226
          Length = 226

 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 2/49 (4%)

Query: 175 CPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNNKTCPVCRLQLEG 223
           CPIC+ E+  G     LPC+H +  +CI+ WL+   N +CP+CR +  G
Sbjct: 174 CPICLTELSSGVSRMKLPCSHVFHRDCIMTWLK--KNPSCPICRTKAHG 220


>AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 |
           chr3:17713367-17716051 REVERSE LENGTH=358
          Length = 358

 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 4/67 (5%)

Query: 152 DSVINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWLRLSNN 211
           +++I  + K R+  +    +   C IC+EE  +G +   LPC H +  ECI QWLRL  N
Sbjct: 214 EALIQELPKFRLKAVP--DDCGECLICLEEFHIGHEVRGLPCAHNFHVECIDQWLRL--N 269

Query: 212 KTCPVCR 218
             CP CR
Sbjct: 270 VKCPRCR 276


>AT4G26400.1 | Symbols:  | RING/U-box superfamily protein |
           chr4:13344953-13346023 REVERSE LENGTH=356
          Length = 356

 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 8/75 (10%)

Query: 147 SVMVQDSVINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWL 206
           S+  +  V++ +  V+ISE         C IC+++   G +A  +PC H +   CI+ WL
Sbjct: 219 SLPARKEVVDNLPTVKISE------SLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWL 272

Query: 207 RLSNNKTCPVCRLQL 221
            L  + +CPVCR +L
Sbjct: 273 EL--HSSCPVCRYEL 285


>AT4G26400.2 | Symbols:  | RING/U-box superfamily protein |
           chr4:13344953-13346023 REVERSE LENGTH=356
          Length = 356

 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 8/75 (10%)

Query: 147 SVMVQDSVINAIHKVRISELHRRGEMSHCPICMEEVKVGDQACLLPCTHFYCSECILQWL 206
           S+  +  V++ +  V+ISE         C IC+++   G +A  +PC H +   CI+ WL
Sbjct: 219 SLPARKEVVDNLPTVKISE------SLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWL 272

Query: 207 RLSNNKTCPVCRLQL 221
            L  + +CPVCR +L
Sbjct: 273 EL--HSSCPVCRYEL 285