Miyakogusa Predicted Gene

Lj0g3v0359149.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0359149.1 tr|A9RHV8|A9RHV8_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_159214,59.7,4e-18,ZF_SP_RING,Zinc finger, MIZ-type;
SUBFAMILY NOT NAMED,NULL; ZINC FINGER MIZ DOMAIN-CONTAINING
PROTEI,CUFF.24713.1
         (508 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G60410.1 | Symbols: ATSIZ1, SIZ1 | DNA-binding protein with M...   485   e-137
AT5G60410.5 | Symbols: ATSIZ1, SIZ1 | DNA-binding protein with M...   485   e-137
AT5G60410.2 | Symbols: ATSIZ1, SIZ1 | DNA-binding protein with M...   485   e-137
AT5G60410.4 | Symbols: ATSIZ1, SIZ1 | DNA-binding protein with M...   458   e-129
AT5G60410.3 | Symbols: ATSIZ1, SIZ1 | DNA-binding protein with M...   430   e-120

>AT5G60410.1 | Symbols: ATSIZ1, SIZ1 | DNA-binding protein with
           MIZ/SP-RING zinc finger, PHD-finger and SAP domain |
           chr5:24295226-24300671 FORWARD LENGTH=873
          Length = 873

 Score =  485 bits (1249), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 269/513 (52%), Positives = 346/513 (67%), Gaps = 26/513 (5%)

Query: 1   MGGFDLEVFVEMNQRSRKWQCPICLKNYALENIVIDPYFNRITTMMRNCGEDVTEIEVKP 60
           MG FDL+VFVE+NQRSRKWQCPICLKNY++E++++DPYFNRIT+ M++C E+VTEIEVKP
Sbjct: 382 MGCFDLDVFVELNQRSRKWQCPICLKNYSVEHVIVDPYFNRITSKMKHCDEEVTEIEVKP 441

Query: 61  DGSWRVKSKSESERLGLGNLVQWHSPNGSLCVSTDGDVKKAEALKYVKQEAVSEGHTGLK 120
           DGSWRVK K ESER  LG L QWH+P+GSLC S   D+K+   +  VKQE  S+G   LK
Sbjct: 442 DGSWRVKFKRESERRELGELSQWHAPDGSLCPSA-VDIKRKMEMLPVKQEGYSDGPAPLK 500

Query: 121 IGIKKNRNGLWELSKPEDTNTSSSHRLKEVFGNPEQVVIPMSSSATGSGWDGDDRSVNQG 180
           +GI+KNRNG+WE+SKP     SSS+R +E  G  E+ +IPMSSSATGSG DGDD SVNQ 
Sbjct: 501 LGIRKNRNGIWEVSKPNTNGLSSSNR-QEKVGYQEKNIIPMSSSATGSGRDGDDASVNQD 559

Query: 181 GGGHIECSTANGTEMDSLCLNNVDLAYGYTAPSTSAQVGGAEVIVLSDSDEDNDILVSSA 240
             G  +   ANG E+DS+ + NVD  Y +   + S + G  EVIVLSDSD++ND++++  
Sbjct: 560 AIGTFDF-VANGMELDSISM-NVDSGYNFPDRNQSGEGGNNEVIVLSDSDDENDLVITPG 617

Query: 241 IAYKNDQNDNADGFSIPPPGIVDSYAEDQN--LGGNSCLGLFPNEDDFGMSSLWSLPSTS 298
            AY   Q D    F + PPGI++SY ED +   GG+S LGLF ++D+F  + LWS PS +
Sbjct: 618 PAYSGCQTDGGLTFPLNPPGIINSYNEDPHSIAGGSSGLGLFNDDDEFD-TPLWSFPSET 676

Query: 299 QAGPGFQLFGSDGDVSDALV--HLPGPVNCTSSLN-GYALAPDTAMGSSSLLHDTPAGRS 355
              PGFQLF SD DVS  LV  H   P+NC+  +N GY +AP+T+M S  ++  +  GRS
Sbjct: 677 PEAPGFQLFRSDADVSGGLVGLHHHSPLNCSPEINGGYTMAPETSMASVPVVPGS-TGRS 735

Query: 356 DADLNGGLVDNPLAFAGDDPSLQIFLPTRPAESSVQNELRDRADVSNGVCTEDWIXXXXX 415
           +A  N GLVDNPLAF  DDPSLQIFLPT+P ++S Q+  +++AD+SNG+ +EDWI     
Sbjct: 736 EA--NDGLVDNPLAFGRDDPSLQIFLPTKP-DASAQSGFKNQADMSNGLRSEDWI----- 787

Query: 416 XXXXXXXXXXXXXXXXXXRGNASIQNGLNSRHQVPAMDDDTHTLADTASLLLGMNDARSD 475
                              G+ +  NG+NS HQ+   +    T  +TASLLLGMND+R D
Sbjct: 788 -------SLRLGDSASGNHGDPATTNGINSSHQMSTREGSMDTTTETASLLLGMNDSRQD 840

Query: 476 KAXXXXXXXXXXXXXQKRSVRPRLYLSIDSDSE 508
           KA             QKRSVRPR+YLSIDSDSE
Sbjct: 841 KAKKQRSDNPFSFPRQKRSVRPRMYLSIDSDSE 873


>AT5G60410.5 | Symbols: ATSIZ1, SIZ1 | DNA-binding protein with
           MIZ/SP-RING zinc finger, PHD-finger and SAP domain |
           chr5:24295226-24300792 FORWARD LENGTH=885
          Length = 885

 Score =  485 bits (1248), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 269/513 (52%), Positives = 347/513 (67%), Gaps = 26/513 (5%)

Query: 1   MGGFDLEVFVEMNQRSRKWQCPICLKNYALENIVIDPYFNRITTMMRNCGEDVTEIEVKP 60
           MG FDL+VFVE+NQRSRKWQCPICLKNY++E++++DPYFNRIT+ M++C E+VTEIEVKP
Sbjct: 382 MGCFDLDVFVELNQRSRKWQCPICLKNYSVEHVIVDPYFNRITSKMKHCDEEVTEIEVKP 441

Query: 61  DGSWRVKSKSESERLGLGNLVQWHSPNGSLCVSTDGDVKKAEALKYVKQEAVSEGHTGLK 120
           DGSWRVK K ESER  LG L QWH+P+GSLC S   D+K+   +  VKQE  S+G   LK
Sbjct: 442 DGSWRVKFKRESERRELGELSQWHAPDGSLCPSA-VDIKRKMEMLPVKQEGYSDGPAPLK 500

Query: 121 IGIKKNRNGLWELSKPEDTNTSSSHRLKEVFGNPEQVVIPMSSSATGSGWDGDDRSVNQG 180
           +GI+KNRNG+WE+SKP     SSS+R ++V G  E+ +IPMSSSATGSG DGDD SVNQ 
Sbjct: 501 LGIRKNRNGIWEVSKPNTNGLSSSNRQEKV-GYQEKNIIPMSSSATGSGRDGDDASVNQD 559

Query: 181 GGGHIECSTANGTEMDSLCLNNVDLAYGYTAPSTSAQVGGAEVIVLSDSDEDNDILVSSA 240
             G  +   ANG E+DS+ + NVD  Y +   + S + G  EVIVLSDSD++ND++++  
Sbjct: 560 AIGTFDF-VANGMELDSISM-NVDSGYNFPDRNQSGEGGNNEVIVLSDSDDENDLVITPG 617

Query: 241 IAYKNDQNDNADGFSIPPPGIVDSYAEDQN--LGGNSCLGLFPNEDDFGMSSLWSLPSTS 298
            AY   Q D    F + PPGI++SY ED +   GG+S LGLF ++D+F  + LWS PS +
Sbjct: 618 PAYSGCQTDGGLTFPLNPPGIINSYNEDPHSIAGGSSGLGLFNDDDEFD-TPLWSFPSET 676

Query: 299 QAGPGFQLFGSDGDVSDALV--HLPGPVNCTSSLN-GYALAPDTAMGSSSLLHDTPAGRS 355
              PGFQLF SD DVS  LV  H   P+NC+  +N GY +AP+T+M S  ++  +  GRS
Sbjct: 677 PEAPGFQLFRSDADVSGGLVGLHHHSPLNCSPEINGGYTMAPETSMASVPVVPGS-TGRS 735

Query: 356 DADLNGGLVDNPLAFAGDDPSLQIFLPTRPAESSVQNELRDRADVSNGVCTEDWIXXXXX 415
           +A  N GLVDNPLAF  DDPSLQIFLPT+P ++S Q+  +++AD+SNG+ +EDWI     
Sbjct: 736 EA--NDGLVDNPLAFGRDDPSLQIFLPTKP-DASAQSGFKNQADMSNGLRSEDWI----- 787

Query: 416 XXXXXXXXXXXXXXXXXXRGNASIQNGLNSRHQVPAMDDDTHTLADTASLLLGMNDARSD 475
                              G+ +  NG+NS HQ+   +    T  +TASLLLGMND+R D
Sbjct: 788 -------SLRLGDSASGNHGDPATTNGINSSHQMSTREGSMDTTTETASLLLGMNDSRQD 840

Query: 476 KAXXXXXXXXXXXXXQKRSVRPRLYLSIDSDSE 508
           KA             QKRSVRPR+YLSIDSDSE
Sbjct: 841 KAKKQRSDNPFSFPRQKRSVRPRMYLSIDSDSE 873


>AT5G60410.2 | Symbols: ATSIZ1, SIZ1 | DNA-binding protein with
           MIZ/SP-RING zinc finger, PHD-finger and SAP domain |
           chr5:24295226-24300792 FORWARD LENGTH=885
          Length = 885

 Score =  485 bits (1248), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 269/513 (52%), Positives = 347/513 (67%), Gaps = 26/513 (5%)

Query: 1   MGGFDLEVFVEMNQRSRKWQCPICLKNYALENIVIDPYFNRITTMMRNCGEDVTEIEVKP 60
           MG FDL+VFVE+NQRSRKWQCPICLKNY++E++++DPYFNRIT+ M++C E+VTEIEVKP
Sbjct: 382 MGCFDLDVFVELNQRSRKWQCPICLKNYSVEHVIVDPYFNRITSKMKHCDEEVTEIEVKP 441

Query: 61  DGSWRVKSKSESERLGLGNLVQWHSPNGSLCVSTDGDVKKAEALKYVKQEAVSEGHTGLK 120
           DGSWRVK K ESER  LG L QWH+P+GSLC S   D+K+   +  VKQE  S+G   LK
Sbjct: 442 DGSWRVKFKRESERRELGELSQWHAPDGSLCPSA-VDIKRKMEMLPVKQEGYSDGPAPLK 500

Query: 121 IGIKKNRNGLWELSKPEDTNTSSSHRLKEVFGNPEQVVIPMSSSATGSGWDGDDRSVNQG 180
           +GI+KNRNG+WE+SKP     SSS+R ++V G  E+ +IPMSSSATGSG DGDD SVNQ 
Sbjct: 501 LGIRKNRNGIWEVSKPNTNGLSSSNRQEKV-GYQEKNIIPMSSSATGSGRDGDDASVNQD 559

Query: 181 GGGHIECSTANGTEMDSLCLNNVDLAYGYTAPSTSAQVGGAEVIVLSDSDEDNDILVSSA 240
             G  +   ANG E+DS+ + NVD  Y +   + S + G  EVIVLSDSD++ND++++  
Sbjct: 560 AIGTFDF-VANGMELDSISM-NVDSGYNFPDRNQSGEGGNNEVIVLSDSDDENDLVITPG 617

Query: 241 IAYKNDQNDNADGFSIPPPGIVDSYAEDQN--LGGNSCLGLFPNEDDFGMSSLWSLPSTS 298
            AY   Q D    F + PPGI++SY ED +   GG+S LGLF ++D+F  + LWS PS +
Sbjct: 618 PAYSGCQTDGGLTFPLNPPGIINSYNEDPHSIAGGSSGLGLFNDDDEFD-TPLWSFPSET 676

Query: 299 QAGPGFQLFGSDGDVSDALV--HLPGPVNCTSSLN-GYALAPDTAMGSSSLLHDTPAGRS 355
              PGFQLF SD DVS  LV  H   P+NC+  +N GY +AP+T+M S  ++  +  GRS
Sbjct: 677 PEAPGFQLFRSDADVSGGLVGLHHHSPLNCSPEINGGYTMAPETSMASVPVVPGS-TGRS 735

Query: 356 DADLNGGLVDNPLAFAGDDPSLQIFLPTRPAESSVQNELRDRADVSNGVCTEDWIXXXXX 415
           +A  N GLVDNPLAF  DDPSLQIFLPT+P ++S Q+  +++AD+SNG+ +EDWI     
Sbjct: 736 EA--NDGLVDNPLAFGRDDPSLQIFLPTKP-DASAQSGFKNQADMSNGLRSEDWI----- 787

Query: 416 XXXXXXXXXXXXXXXXXXRGNASIQNGLNSRHQVPAMDDDTHTLADTASLLLGMNDARSD 475
                              G+ +  NG+NS HQ+   +    T  +TASLLLGMND+R D
Sbjct: 788 -------SLRLGDSASGNHGDPATTNGINSSHQMSTREGSMDTTTETASLLLGMNDSRQD 840

Query: 476 KAXXXXXXXXXXXXXQKRSVRPRLYLSIDSDSE 508
           KA             QKRSVRPR+YLSIDSDSE
Sbjct: 841 KAKKQRSDNPFSFPRQKRSVRPRMYLSIDSDSE 873


>AT5G60410.4 | Symbols: ATSIZ1, SIZ1 | DNA-binding protein with
           MIZ/SP-RING zinc finger, PHD-finger and SAP domain |
           chr5:24295226-24300830 FORWARD LENGTH=884
          Length = 884

 Score =  458 bits (1179), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 256/499 (51%), Positives = 332/499 (66%), Gaps = 26/499 (5%)

Query: 1   MGGFDLEVFVEMNQRSRKWQCPICLKNYALENIVIDPYFNRITTMMRNCGEDVTEIEVKP 60
           MG FDL+VFVE+NQRSRKWQCPICLKNY++E++++DPYFNRIT+ M++C E+VTEIEVKP
Sbjct: 382 MGCFDLDVFVELNQRSRKWQCPICLKNYSVEHVIVDPYFNRITSKMKHCDEEVTEIEVKP 441

Query: 61  DGSWRVKSKSESERLGLGNLVQWHSPNGSLCVSTDGDVKKAEALKYVKQEAVSEGHTGLK 120
           DGSWRVK K ESER  LG L QWH+P+GSLC S   D+K+   +  VKQE  S+G   LK
Sbjct: 442 DGSWRVKFKRESERRELGELSQWHAPDGSLCPSA-VDIKRKMEMLPVKQEGYSDGPAPLK 500

Query: 121 IGIKKNRNGLWELSKPEDTNTSSSHRLKEVFGNPEQVVIPMSSSATGSGWDGDDRSVNQG 180
           +GI+KNRNG+WE+SKP     SSS+R +E  G  E+ +IPMSSSATGSG DGDD SVNQ 
Sbjct: 501 LGIRKNRNGIWEVSKPNTNGLSSSNR-QEKVGYQEKNIIPMSSSATGSGRDGDDASVNQD 559

Query: 181 GGGHIECSTANGTEMDSLCLNNVDLAYGYTAPSTSAQVGGAEVIVLSDSDEDNDILVSSA 240
             G  +   ANG E+DS+ + NVD  Y +   + S + G  EVIVLSDSD++ND++++  
Sbjct: 560 AIGTFD-FVANGMELDSISM-NVDSGYNFPDRNQSGEGGNNEVIVLSDSDDENDLVITPG 617

Query: 241 IAYKNDQNDNADGFSIPPPGIVDSYAEDQN--LGGNSCLGLFPNEDDFGMSSLWSLPSTS 298
            AY   Q D    F + PPGI++SY ED +   GG+S LGLF ++D+F  + LWS PS +
Sbjct: 618 PAYSGCQTDGGLTFPLNPPGIINSYNEDPHSIAGGSSGLGLFNDDDEFD-TPLWSFPSET 676

Query: 299 QAGPGFQLFGSDGDVSDALV--HLPGPVNCTSSLN-GYALAPDTAMGSSSLLHDTPAGRS 355
              PGFQLF SD DVS  LV  H   P+NC+  +N GY +AP+T+M S  ++  +  GRS
Sbjct: 677 PEAPGFQLFRSDADVSGGLVGLHHHSPLNCSPEINGGYTMAPETSMASVPVVPGS-TGRS 735

Query: 356 DADLNGGLVDNPLAFAGDDPSLQIFLPTRPAESSVQNELRDRADVSNGVCTEDWIXXXXX 415
           +A  N GLVDNPLAF  DDPSLQIFLPT+P ++S Q+  +++AD+SNG+ +EDWI     
Sbjct: 736 EA--NDGLVDNPLAFGRDDPSLQIFLPTKP-DASAQSGFKNQADMSNGLRSEDWI----- 787

Query: 416 XXXXXXXXXXXXXXXXXXRGNASIQNGLNSRHQVPAMDDDTHTLADTASLLLGMNDARSD 475
                              G+ +  NG+NS HQ+   +    T  +TASLLLGMND+R D
Sbjct: 788 -------SLRLGDSASGNHGDPATTNGINSSHQMSTREGSMDTTTETASLLLGMNDSRQD 840

Query: 476 KAXXXXXXXXXXXXXQKRS 494
           KA             QKRS
Sbjct: 841 KAKKQRSDNPFSFPRQKRS 859


>AT5G60410.3 | Symbols: ATSIZ1, SIZ1 | DNA-binding protein with
           MIZ/SP-RING zinc finger, PHD-finger and SAP domain |
           chr5:24295226-24300300 FORWARD LENGTH=832
          Length = 832

 Score =  430 bits (1105), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 239/467 (51%), Positives = 315/467 (67%), Gaps = 26/467 (5%)

Query: 1   MGGFDLEVFVEMNQRSRKWQCPICLKNYALENIVIDPYFNRITTMMRNCGEDVTEIEVKP 60
           MG FDL+VFVE+NQRSRKWQCPICLKNY++E++++DPYFNRIT+ M++C E+VTEIEVKP
Sbjct: 382 MGCFDLDVFVELNQRSRKWQCPICLKNYSVEHVIVDPYFNRITSKMKHCDEEVTEIEVKP 441

Query: 61  DGSWRVKSKSESERLGLGNLVQWHSPNGSLCVSTDGDVKKAEALKYVKQEAVSEGHTGLK 120
           DGSWRVK K ESER  LG L QWH+P+GSLC S   D+K+   +  VKQE  S+G   LK
Sbjct: 442 DGSWRVKFKRESERRELGELSQWHAPDGSLCPSA-VDIKRKMEMLPVKQEGYSDGPAPLK 500

Query: 121 IGIKKNRNGLWELSKPEDTNTSSSHRLKEVFGNPEQVVIPMSSSATGSGWDGDDRSVNQG 180
           +GI+KNRNG+WE+SKP     SSS+R ++V G  E+ +IPMSSSATGSG DGDD SVNQ 
Sbjct: 501 LGIRKNRNGIWEVSKPNTNGLSSSNRQEKV-GYQEKNIIPMSSSATGSGRDGDDASVNQD 559

Query: 181 GGGHIECSTANGTEMDSLCLNNVDLAYGYTAPSTSAQVGGAEVIVLSDSDEDNDILVSSA 240
             G  +   ANG E+DS+ + NVD  Y +   + S + G  EVIVLSDSD++ND++++  
Sbjct: 560 AIGTFDF-VANGMELDSISM-NVDSGYNFPDRNQSGEGGNNEVIVLSDSDDENDLVITPG 617

Query: 241 IAYKNDQNDNADGFSIPPPGIVDSYAEDQN--LGGNSCLGLFPNEDDFGMSSLWSLPSTS 298
            AY   Q D    F + PPGI++SY ED +   GG+S LGLF ++D+F  + LWS PS +
Sbjct: 618 PAYSGCQTDGGLTFPLNPPGIINSYNEDPHSIAGGSSGLGLFNDDDEFD-TPLWSFPSET 676

Query: 299 QAGPGFQLFGSDGDVSDALV--HLPGPVNCTSSLN-GYALAPDTAMGSSSLLHDTPAGRS 355
              PGFQLF SD DVS  LV  H   P+NC+  +N GY +AP+T+M S  ++  +  GRS
Sbjct: 677 PEAPGFQLFRSDADVSGGLVGLHHHSPLNCSPEINGGYTMAPETSMASVPVVPGS-TGRS 735

Query: 356 DADLNGGLVDNPLAFAGDDPSLQIFLPTRPAESSVQNELRDRADVSNGVCTEDWIXXXXX 415
           +A  N GLVDNPLAF  DDPSLQIFLPT+P ++S Q+  +++AD+SNG+ +EDWI     
Sbjct: 736 EA--NDGLVDNPLAFGRDDPSLQIFLPTKP-DASAQSGFKNQADMSNGLRSEDWI----- 787

Query: 416 XXXXXXXXXXXXXXXXXXRGNASIQNGLNSRHQVPAMDDDTHTLADT 462
                              G+ +  NG+NS HQ+   +    T  +T
Sbjct: 788 -------SLRLGDSASGNHGDPATTNGINSSHQMSTREGSMDTTTET 827