Miyakogusa Predicted Gene

Lj0g3v0359139.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0359139.1 tr|A8IYQ5|A8IYQ5_CHLRE Predicted protein
(Fragment) OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_14813,26.23,0.00000000000005,SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,NULL; CytochromB561_N,Cytochrome
B561-related,CUFF.24707.1
         (368 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G07970.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Cytochrome...   543   e-155

>AT1G07970.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Cytochrome
           B561-related, N-terminal (InterPro:IPR019176); Has 215
           Blast hits to 213 proteins in 79 species: Archae - 0;
           Bacteria - 6; Metazoa - 131; Fungi - 22; Plants - 42;
           Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
           | chr1:2469528-2472518 REVERSE LENGTH=693
          Length = 693

 Score =  543 bits (1400), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 253/377 (67%), Positives = 311/377 (82%), Gaps = 11/377 (2%)

Query: 1   MSPGSQKFKTPPKKGEGDLPPPMSMEESIEAFEQLGIYPQIEQWRDQLRQWFSTVLLNPL 60
           MSPG+QKF TPPKKGEGD P PMS+E +IE F  LG+YPQIE WRD+LRQW S+VLL PL
Sbjct: 319 MSPGAQKFTTPPKKGEGDFPNPMSLERAIEGFIHLGVYPQIEDWRDRLRQWCSSVLLKPL 378

Query: 61  IHKIETSHVQVMQAAAKLGISITISQVGNDMLSTGSA---LPTTDKTQDWQPALTFNEDG 117
           ++K+ETSH+QVMQ A+KLG+++T+SQVG+D+ + G+A   LP  D+T+ WQP+ + +ED 
Sbjct: 379 LNKVETSHIQVMQTASKLGVNVTVSQVGSDLPTNGTATTALPV-DRTKGWQPSYSLDEDA 437

Query: 118 LLHQLNSTLVQAIEASKSKLLVSNMQQSPQQTPS------VPIMQECVDAITEHQRLQAL 171
           LLHQL + LVQAI+AS  KL   N Q   QQ         +P+MQECVDAI+EH+RLQ L
Sbjct: 438 LLHQLRANLVQAIDASMQKLRTENQQFQQQQQQQQQQAALIPVMQECVDAISEHRRLQGL 497

Query: 172 VKGEWVKGLLPQSSVRADYTIQRIRELAEGTCLKNYEYLGSGEVYDKKNKKWTLELPSDS 231
           +KGEWVKGLLP+SS+ ADYT+QRIR LAEGTC+KNYEY G  +  +K NKKW+LE P+DS
Sbjct: 498 MKGEWVKGLLPRSSIPADYTVQRIRALAEGTCVKNYEYNGGADTREK-NKKWSLEPPTDS 556

Query: 232 HLLLYLFCAFLEHPKWILHADAMSYTGAQSSKNPLFLGVLPPKERFPEKCIAVVSSVPSV 291
           HLLLYLFCAFLEHPKW+LH D  SYTG Q+SKNPLFLGVLPPKERFPEK IAVVS VPS 
Sbjct: 557 HLLLYLFCAFLEHPKWMLHLDPSSYTGTQASKNPLFLGVLPPKERFPEKYIAVVSGVPST 616

Query: 292 LHPGACMLVVGKQGPPIFALYWDKKAQFSLQGRTALWDSILLLCHKVKVGYGGIIRGIHL 351
           LHPGAC+L V KQ PP FALYWDKK QF+LQGRTALWDS+LL+CH++KVGYGG++RG++L
Sbjct: 617 LHPGACVLAVDKQSPPTFALYWDKKVQFTLQGRTALWDSMLLICHRIKVGYGGVVRGMNL 676

Query: 352 GAPALNILPVLETESED 368
           G+ ALNIL V++++++D
Sbjct: 677 GSSALNILQVVDSDTDD 693