Miyakogusa Predicted Gene

Lj0g3v0358999.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0358999.1 Non Chatacterized Hit- tr|I1LWX5|I1LWX5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,79.64,0,no
description,NULL; no description,Rossmann-like alpha/beta/alpha
sandwich fold; SUBFAMILY NOT NAME,CUFF.24702.1
         (491 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G19920.1 | Symbols: APS2, ASA1 | Pseudouridine synthase/archa...   748   0.0  
AT3G22890.1 | Symbols: APS1 | ATP sulfurylase 1 | chr3:8112837-8...   664   0.0  
AT5G43780.1 | Symbols: APS4 | Pseudouridine synthase/archaeosine...   662   0.0  
AT4G14680.1 | Symbols: APS3 | Pseudouridine synthase/archaeosine...   662   0.0  

>AT1G19920.1 | Symbols: APS2, ASA1 | Pseudouridine
           synthase/archaeosine transglycosylase-like family
           protein | chr1:6914835-6916657 REVERSE LENGTH=476
          Length = 476

 Score =  748 bits (1932), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/423 (82%), Positives = 387/423 (91%), Gaps = 6/423 (1%)

Query: 69  VRSSLIEPDGGALVDLVVPESQRGLKAVEAEALPKVRLTRVDLEWVHVIGEGWASPLRGF 128
           V+SSLI+PDGG LV+L+VPE++ G+K  E+E +PKV+L ++DLEWVHVI EGWASPL+GF
Sbjct: 60  VKSSLIDPDGGELVELIVPETEIGVKKAESETMPKVKLNQIDLEWVHVISEGWASPLKGF 119

Query: 129 MREDEYLQSLHFNSMRVEXXXXXXXXSVVNMSLPIVLAIDDETKGQIGSSSNVSLIGPDG 188
           MREDEYLQSLHFNS+R++        + VNMSLPIVLAIDD+TK QIGSS NV+L+ P G
Sbjct: 120 MREDEYLQSLHFNSLRLKNG------TFVNMSLPIVLAIDDDTKEQIGSSENVALVCPQG 173

Query: 189 DCVAILRSIQIYKHNKEERIARTWGTTAPGLPYVEEVITPAGNWLIGGDLELLKPIKYND 248
           D +  LRS++IYKHNKEERIARTWGTT+PGLPYVEE ITP+GNWLIGGDLE+ +PIKYND
Sbjct: 174 DIIGSLRSVEIYKHNKEERIARTWGTTSPGLPYVEEYITPSGNWLIGGDLEVFEPIKYND 233

Query: 249 GLDHYRLSPKQLREEFDRREADAVFAFQLRNPVHNGHALLMNDTRNRLLEMGYKNPILLL 308
           GLDHYRLSPKQLREEFD R+ADAVFAFQLRNPVHNGHALLMNDTR RLLEMGYKNP+LLL
Sbjct: 234 GLDHYRLSPKQLREEFDNRQADAVFAFQLRNPVHNGHALLMNDTRKRLLEMGYKNPVLLL 293

Query: 309 HPLGGFTKADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFPSPMHYAGPTEVQWHAKGRI 368
           HPLGGFTKADDVPLDVRMEQHSKVLEDGVLDP+TTIVSIFPSPMHYAGPTEVQWHAK RI
Sbjct: 294 HPLGGFTKADDVPLDVRMEQHSKVLEDGVLDPKTTIVSIFPSPMHYAGPTEVQWHAKARI 353

Query: 369 NAGANFYIVGRDPAGIGHPTEKRDLYDPDHGKKVLSMAPGLEKLNILPFRVAAYDTKDKK 428
           NAGANFYIVGRDPAG+GHPTEKRDLYDPDHGK+VLSMAPGLEKLNILPFRVAAYDT +KK
Sbjct: 354 NAGANFYIVGRDPAGMGHPTEKRDLYDPDHGKRVLSMAPGLEKLNILPFRVAAYDTIEKK 413

Query: 429 MAFFDPTRSQDFLFISGTKMRAYARSGENPPDGFMCPSGWKVLVNYYKSLQAEEAAQQPV 488
           MAFFDP+R+++FLFISGTKMR YAR+GENPPDGFMCPSGW VLV YY+SLQ  EA QQ V
Sbjct: 414 MAFFDPSRAKEFLFISGTKMRTYARTGENPPDGFMCPSGWNVLVKYYESLQESEAKQQAV 473

Query: 489 LSA 491
           +SA
Sbjct: 474 VSA 476


>AT3G22890.1 | Symbols: APS1 | ATP sulfurylase 1 |
           chr3:8112837-8114734 FORWARD LENGTH=463
          Length = 463

 Score =  664 bits (1712), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/414 (76%), Positives = 355/414 (85%), Gaps = 6/414 (1%)

Query: 65  RMQGVRSSLIEPDGGALVDLVVPESQRGLKAVEAEALPKVRLTRVDLEWVHVIGEGWASP 124
           R+  +R+ LI PDGG LV+L+V E +R  K  EA  LP+V LT +DL+W+HV+ EGWASP
Sbjct: 42  RVGSIRAGLIAPDGGKLVELIVEEPKRREKKHEAADLPRVELTAIDLQWMHVLSEGWASP 101

Query: 125 LRGFMREDEYLQSLHFNSMRVEXXXXXXXXSVVNMSLPIVLAIDDETKGQIGSSSNVSLI 184
           L GFMRE E+LQ+LHFNS+R++        SVVNMS+PIVLAIDDE K +IG S+ V+L 
Sbjct: 102 LGGFMRESEFLQTLHFNSLRLDDG------SVVNMSVPIVLAIDDEQKARIGESTRVALF 155

Query: 185 GPDGDCVAILRSIQIYKHNKEERIARTWGTTAPGLPYVEEVITPAGNWLIGGDLELLKPI 244
             DG+ VAIL  I+IYKH KEERIARTWGTTAPGLPYV+E IT AGNWLIGGDLE+L+P+
Sbjct: 156 NSDGNPVAILSDIEIYKHPKEERIARTWGTTAPGLPYVDEAITNAGNWLIGGDLEVLEPV 215

Query: 245 KYNDGLDHYRLSPKQLREEFDRREADAVFAFQLRNPVHNGHALLMNDTRNRLLEMGYKNP 304
           KYNDGLD +RLSP +LR+E ++R ADAVFAFQLRNPVHNGHALLM DTR RLLEMGYKNP
Sbjct: 216 KYNDGLDRFRLSPAELRKELEKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYKNP 275

Query: 305 ILLLHPLGGFTKADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFPSPMHYAGPTEVQWHA 364
           ILLLHPLGGFTKADDVPLD RM+QH KVLEDGVLDPETT+VSIFPSPMHYAGPTEVQWHA
Sbjct: 276 ILLLHPLGGFTKADDVPLDWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHA 335

Query: 365 KGRINAGANFYIVGRDPAGIGHPTEKRDLYDPDHGKKVLSMAPGLEKLNILPFRVAAYDT 424
           K RINAGANFYIVGRDPAG+GHP EKRDLYD DHGKKVLSMAPGLE+LNILPFRVAAYD 
Sbjct: 336 KARINAGANFYIVGRDPAGMGHPVEKRDLYDADHGKKVLSMAPGLERLNILPFRVAAYDK 395

Query: 425 KDKKMAFFDPTRSQDFLFISGTKMRAYARSGENPPDGFMCPSGWKVLVNYYKSL 478
              KMAFFDP+R QDFLFISGTKMR  A++ ENPPDGFMCP GWKVLV+YY+SL
Sbjct: 396 TQGKMAFFDPSRPQDFLFISGTKMRTLAKNNENPPDGFMCPGGWKVLVDYYESL 449


>AT5G43780.1 | Symbols: APS4 | Pseudouridine synthase/archaeosine
           transglycosylase-like family protein |
           chr5:17589631-17591480 REVERSE LENGTH=469
          Length = 469

 Score =  662 bits (1709), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/435 (73%), Positives = 363/435 (83%), Gaps = 7/435 (1%)

Query: 48  YSSNSLIIATTRKLKLPRMQGVRSSLIEPDGGALVDLVVPESQRGLKAVEAEALP-KVRL 106
           Y+  S+ + +  +    R   V+S LIEPDGG L++LVV ES+R +   EAE +P +++L
Sbjct: 28  YAPGSISVVSLPRQVSRRGLSVKSGLIEPDGGKLMNLVVEESRRRVMKHEAETVPARIKL 87

Query: 107 TRVDLEWVHVIGEGWASPLRGFMREDEYLQSLHFNSMRVEXXXXXXXXSVVNMSLPIVLA 166
            RVDLEWVHV+ EGWASPL+GFMR+ E+LQ+LHFNS R+E        SVVNMS+PIVLA
Sbjct: 88  NRVDLEWVHVLSEGWASPLKGFMRQSEFLQTLHFNSFRLEDG------SVVNMSVPIVLA 141

Query: 167 IDDETKGQIGSSSNVSLIGPDGDCVAILRSIQIYKHNKEERIARTWGTTAPGLPYVEEVI 226
           IDD+ K +IG S+ V+L+   G+ +AIL  I+IYKH KEERIARTWGTTA GLPY EE I
Sbjct: 142 IDDDQKFRIGDSNQVTLVDSVGNPIAILNDIEIYKHPKEERIARTWGTTARGLPYAEEAI 201

Query: 227 TPAGNWLIGGDLELLKPIKYNDGLDHYRLSPKQLREEFDRREADAVFAFQLRNPVHNGHA 286
           T AGNWLIGGDL++L+PIKYNDGLD +RLSP QLREEF RR ADAVFAFQLRNPVHNGHA
Sbjct: 202 TKAGNWLIGGDLQVLEPIKYNDGLDRFRLSPSQLREEFIRRGADAVFAFQLRNPVHNGHA 261

Query: 287 LLMNDTRNRLLEMGYKNPILLLHPLGGFTKADDVPLDVRMEQHSKVLEDGVLDPETTIVS 346
           LLM DTR RLLEMGYKNP+LLL+PLGGFTKADDVPL  RM QH KVLEDGVLDPETT+VS
Sbjct: 262 LLMTDTRRRLLEMGYKNPVLLLNPLGGFTKADDVPLSWRMRQHEKVLEDGVLDPETTVVS 321

Query: 347 IFPSPMHYAGPTEVQWHAKGRINAGANFYIVGRDPAGIGHPTEKRDLYDPDHGKKVLSMA 406
           IFPSPM YAGPTEVQWHAK RINAGANFYIVGRDPAG+GHPTEKRDLYD DHGKKVLSMA
Sbjct: 322 IFPSPMLYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPTEKRDLYDADHGKKVLSMA 381

Query: 407 PGLEKLNILPFRVAAYDTKDKKMAFFDPTRSQDFLFISGTKMRAYARSGENPPDGFMCPS 466
           PGLE+LNILPF+VAAYD    KMAFFDP+RSQDFLFISGTKMR  A+  ENPPDGFMCPS
Sbjct: 382 PGLERLNILPFKVAAYDKTQGKMAFFDPSRSQDFLFISGTKMRGLAKKKENPPDGFMCPS 441

Query: 467 GWKVLVNYYKSLQAE 481
           GWKVLV+YY SL AE
Sbjct: 442 GWKVLVDYYDSLSAE 456


>AT4G14680.1 | Symbols: APS3 | Pseudouridine synthase/archaeosine
           transglycosylase-like family protein |
           chr4:8413443-8415311 REVERSE LENGTH=465
          Length = 465

 Score =  662 bits (1708), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/429 (74%), Positives = 359/429 (83%), Gaps = 6/429 (1%)

Query: 50  SNSLIIATTRKLKLPRMQGVRSSLIEPDGGALVDLVVPESQRGLKAVEAEALPKVRLTRV 109
           + S+   +  K +  R   VR+ LIEPDGG LVDLVVPE +R  K  EA  LP+VRLT +
Sbjct: 29  TTSISFPSNSKTRSLRTISVRAGLIEPDGGKLVDLVVPEPRRREKKHEAADLPRVRLTAI 88

Query: 110 DLEWVHVIGEGWASPLRGFMREDEYLQSLHFNSMRVEXXXXXXXXSVVNMSLPIVLAIDD 169
           DL+W+HV+ EGWASPLRGFMRE E+LQ+LHFN + ++        SVVNMS+PIVLAIDD
Sbjct: 89  DLQWMHVLSEGWASPLRGFMRESEFLQTLHFNLLNLDDG------SVVNMSVPIVLAIDD 142

Query: 170 ETKGQIGSSSNVSLIGPDGDCVAILRSIQIYKHNKEERIARTWGTTAPGLPYVEEVITPA 229
           + K  IG S  VSL+  D + +AIL  I+IYKH KEERIARTWGTTAPGLPYVEE IT A
Sbjct: 143 QQKALIGESKRVSLVDSDDNPIAILNDIEIYKHPKEERIARTWGTTAPGLPYVEEAITNA 202

Query: 230 GNWLIGGDLELLKPIKYNDGLDHYRLSPKQLREEFDRREADAVFAFQLRNPVHNGHALLM 289
           G+WLIGGDLE+L+P+KYNDGLD +RLSP +LR+E ++R ADAVFAFQLRNPVHNGHALLM
Sbjct: 203 GDWLIGGDLEVLEPVKYNDGLDRFRLSPFELRKELEKRGADAVFAFQLRNPVHNGHALLM 262

Query: 290 NDTRNRLLEMGYKNPILLLHPLGGFTKADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFP 349
            DTR RLLEMGYKNPILLLHPLGGFTKADDVPL  RM+QH KVLEDGVLDPETT+VSIFP
Sbjct: 263 TDTRRRLLEMGYKNPILLLHPLGGFTKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFP 322

Query: 350 SPMHYAGPTEVQWHAKGRINAGANFYIVGRDPAGIGHPTEKRDLYDPDHGKKVLSMAPGL 409
           SPM YAGPTEVQWHAK RINAGANFYIVGRDPAG+GHP EKRDLYD DHGKKVLSMAPGL
Sbjct: 323 SPMLYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPVEKRDLYDADHGKKVLSMAPGL 382

Query: 410 EKLNILPFRVAAYDTKDKKMAFFDPTRSQDFLFISGTKMRAYARSGENPPDGFMCPSGWK 469
           E+LNILPFRVAAYD    KMAFFDP+R+QDFLFISGTKMRA A++ ENPPDGFMCP GWK
Sbjct: 383 ERLNILPFRVAAYDKTQGKMAFFDPSRAQDFLFISGTKMRALAKNRENPPDGFMCPGGWK 442

Query: 470 VLVNYYKSL 478
           VLV+YY SL
Sbjct: 443 VLVDYYDSL 451