Miyakogusa Predicted Gene
- Lj0g3v0358889.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0358889.1 Non Chatacterized Hit- tr|I1MZJ6|I1MZJ6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,39.02,0.00000000000003,SUBFAMILY NOT NAMED,NULL; DNA2/NAM7
HELICASE FAMILY,NULL; P-loop containing nucleoside triphosphate
,CUFF.24690.1
(506 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G65810.1 | Symbols: | P-loop containing nucleoside triphosph... 388 e-108
AT1G65810.2 | Symbols: | P-loop containing nucleoside triphosph... 388 e-108
AT5G37140.1 | Symbols: | P-loop containing nucleoside triphosph... 371 e-103
AT5G37150.1 | Symbols: | P-loop containing nucleoside triphosph... 370 e-102
AT5G52090.1 | Symbols: | P-loop containing nucleoside triphosph... 370 e-102
AT4G05540.1 | Symbols: | P-loop containing nucleoside triphosph... 369 e-102
AT1G65780.1 | Symbols: | P-loop containing nucleoside triphosph... 357 8e-99
AT5G37160.1 | Symbols: | P-loop containing nucleoside triphosph... 234 1e-61
AT5G37030.1 | Symbols: | P-loop containing nucleoside triphosph... 200 2e-51
AT4G15570.1 | Symbols: MAA3 | P-loop containing nucleoside triph... 102 6e-22
AT1G16800.1 | Symbols: | P-loop containing nucleoside triphosph... 101 1e-21
AT4G30100.1 | Symbols: | P-loop containing nucleoside triphosph... 99 9e-21
AT2G19120.1 | Symbols: | P-loop containing nucleoside triphosph... 98 1e-20
AT5G47010.1 | Symbols: UPF1, LBA1, ATUPF1 | RNA helicase, putati... 90 5e-18
AT2G03270.1 | Symbols: | DNA-binding protein, putative | chr2:9... 76 6e-14
AT1G05460.1 | Symbols: SDE3 | P-loop containing nucleoside triph... 62 1e-09
AT5G35970.1 | Symbols: | P-loop containing nucleoside triphosph... 58 2e-08
AT2G38770.1 | Symbols: EMB2765 | P-loop containing nucleoside tr... 57 4e-08
>AT1G65810.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:24477043-24480728
REVERSE LENGTH=1050
Length = 1050
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 293/493 (59%), Gaps = 81/493 (16%)
Query: 3 NCCH-NNTKLIWGPPGTGKTKTVACLLFSFLKLKARTLAFAPTNTAVLEVAVRLHSLFTG 61
+C H NN KLIWGPPGTGKTKT + LL +FLK++ RTL APTN AVLEV RL L +
Sbjct: 283 SCNHSNNIKLIWGPPGTGKTKTTSVLLLNFLKMRCRTLTCAPTNIAVLEVCSRLVKLVSE 342
Query: 62 SNEHKTYGMGDILLFGNRSRMKVDSYQGLRDMFLDYRVEDLKKCLDPSTGWKHILESMIQ 121
S YG+GDI+LFGN+ RMK+D + L D+FL+YRV++L +C TGW+ + MI
Sbjct: 343 SLRFDGYGLGDIVLFGNKERMKIDDREDLFDVFLEYRVDELYRCFMALTGWRANVNRMIC 402
Query: 122 LLEEPRKQYILYENKKGLMSLQDFAMRNDFHIVHAYRLYKRSQGNDDSVSFEEFVQIKSK 181
LL +P+ EF Q KS
Sbjct: 403 LLSDPK---------------------------------------------HEFRQFKSV 417
Query: 182 ALAEQYQSYKNDKKKNILTMDDFLKQEFKVLSVELKLFMQTLYTHLPSSFISLETVKEMF 241
+L+ DF+++ L +L TL HLP+S +S ++M
Sbjct: 418 -------------NTTLLSFKDFVEERLSRLRYDLHHQFTTLCLHLPTSLLSFRVAEKMN 464
Query: 242 RAQDLLRSLEMS--LRQA------KFKQSGADNDNESILSSLGWSSYERVECLGILNSLS 293
+ +LLR++ S +R K K +G +ND+ + +CL +L S+S
Sbjct: 465 QTNNLLRNIAASDVMRDGYGRMKYKLKDTGDENDSRT------------QDCLEMLTSIS 512
Query: 294 KSIPLPEVDLEGGVAKFCLSKASIILCTATSSIKLDAQGENPVQFLVIDEAAQLKECEST 353
SI LP+ + + K CL A ++ CTA+SS +L +P+Q LVIDEAAQLKECES
Sbjct: 513 MSIKLPDFISKFELQKLCLDNAYLLFCTASSSARLHMS--SPIQLLVIDEAAQLKECESA 570
Query: 354 IPLQLSGLSHCILIGDERQLPALVKSRIADKAEFGRSLFERLVMLGYKKHMLNVQYRMHP 413
IPLQL GL H ILIGDE+QLPA++KS IA +A+ GRSLFERLV+LG+ K +LN+QYRMHP
Sbjct: 571 IPLQLRGLQHAILIGDEKQLPAMIKSNIASEADLGRSLFERLVLLGHNKQLLNMQYRMHP 630
Query: 414 SISLFPCKEFYDEKLSDAPTVREKSYDRSFLDGELFGSYSFIHIAKGKEQFGREHSLKNQ 473
SIS+FP +EFYD K+ DAP+VR +SY++ FL +++G YSFI+IA G+EQFG +S KN
Sbjct: 631 SISIFPNREFYDMKILDAPSVRLRSYEKKFLPEKMYGPYSFINIAYGREQFGEGYSSKNL 690
Query: 474 VEAAVISEIVGRL 486
VE +V++EIV +L
Sbjct: 691 VEVSVVAEIVSKL 703
>AT1G65810.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:24477043-24480728
REVERSE LENGTH=1016
Length = 1016
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 293/493 (59%), Gaps = 81/493 (16%)
Query: 3 NCCH-NNTKLIWGPPGTGKTKTVACLLFSFLKLKARTLAFAPTNTAVLEVAVRLHSLFTG 61
+C H NN KLIWGPPGTGKTKT + LL +FLK++ RTL APTN AVLEV RL L +
Sbjct: 283 SCNHSNNIKLIWGPPGTGKTKTTSVLLLNFLKMRCRTLTCAPTNIAVLEVCSRLVKLVSE 342
Query: 62 SNEHKTYGMGDILLFGNRSRMKVDSYQGLRDMFLDYRVEDLKKCLDPSTGWKHILESMIQ 121
S YG+GDI+LFGN+ RMK+D + L D+FL+YRV++L +C TGW+ + MI
Sbjct: 343 SLRFDGYGLGDIVLFGNKERMKIDDREDLFDVFLEYRVDELYRCFMALTGWRANVNRMIC 402
Query: 122 LLEEPRKQYILYENKKGLMSLQDFAMRNDFHIVHAYRLYKRSQGNDDSVSFEEFVQIKSK 181
LL +P+ EF Q KS
Sbjct: 403 LLSDPK---------------------------------------------HEFRQFKSV 417
Query: 182 ALAEQYQSYKNDKKKNILTMDDFLKQEFKVLSVELKLFMQTLYTHLPSSFISLETVKEMF 241
+L+ DF+++ L +L TL HLP+S +S ++M
Sbjct: 418 -------------NTTLLSFKDFVEERLSRLRYDLHHQFTTLCLHLPTSLLSFRVAEKMN 464
Query: 242 RAQDLLRSLEMS--LRQA------KFKQSGADNDNESILSSLGWSSYERVECLGILNSLS 293
+ +LLR++ S +R K K +G +ND+ + +CL +L S+S
Sbjct: 465 QTNNLLRNIAASDVMRDGYGRMKYKLKDTGDENDSRT------------QDCLEMLTSIS 512
Query: 294 KSIPLPEVDLEGGVAKFCLSKASIILCTATSSIKLDAQGENPVQFLVIDEAAQLKECEST 353
SI LP+ + + K CL A ++ CTA+SS +L +P+Q LVIDEAAQLKECES
Sbjct: 513 MSIKLPDFISKFELQKLCLDNAYLLFCTASSSARLHMS--SPIQLLVIDEAAQLKECESA 570
Query: 354 IPLQLSGLSHCILIGDERQLPALVKSRIADKAEFGRSLFERLVMLGYKKHMLNVQYRMHP 413
IPLQL GL H ILIGDE+QLPA++KS IA +A+ GRSLFERLV+LG+ K +LN+QYRMHP
Sbjct: 571 IPLQLRGLQHAILIGDEKQLPAMIKSNIASEADLGRSLFERLVLLGHNKQLLNMQYRMHP 630
Query: 414 SISLFPCKEFYDEKLSDAPTVREKSYDRSFLDGELFGSYSFIHIAKGKEQFGREHSLKNQ 473
SIS+FP +EFYD K+ DAP+VR +SY++ FL +++G YSFI+IA G+EQFG +S KN
Sbjct: 631 SISIFPNREFYDMKILDAPSVRLRSYEKKFLPEKMYGPYSFINIAYGREQFGEGYSSKNL 690
Query: 474 VEAAVISEIVGRL 486
VE +V++EIV +L
Sbjct: 691 VEVSVVAEIVSKL 703
>AT5G37140.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:14690436-14692851
FORWARD LENGTH=692
Length = 692
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/488 (44%), Positives = 286/488 (58%), Gaps = 46/488 (9%)
Query: 3 NCCHNNT-KLIWGPPGTGKTKTVACLLFSFLKLKARTLAFAPTNTAVLEVAVRLHSLF-T 60
NC H ++ KLIWGPPGTGKTKTVA LLF LKL +T+ APTNTA++EV RL SLF T
Sbjct: 90 NCNHKHSVKLIWGPPGTGKTKTVATLLFCLLKLSCKTVVCAPTNTAIVEVTSRLLSLFKT 149
Query: 61 GSNEHKTYGMGDILLFGNRSRMKVDSYQGLRDMFLDYRVEDLKKCLDPSTGWKHILESMI 120
S+EH TYG+G+I+L GN++RM + L D+FLD R+ L P++GWK LES+I
Sbjct: 150 SSSEHSTYGLGNIVLSGNQARMGIKENDVLLDVFLDERIGILTSLFSPTSGWKQRLESLI 209
Query: 121 QLLEEPRKQYILYENKKGLMSLQDFAMRNDFHIVHAYRLYKRSQGNDDSVSFEEFVQIKS 180
LE +Y H VH + E ++
Sbjct: 210 DFLENTEAKYE--------------------HYVHLLK---------------EVERMSE 234
Query: 181 KALAEQYQSYKNDKKKNILTMDDFLKQEFKVLSVELKLFMQTLYTHLPSSFISLETVKEM 240
+A ++ + K K ILT +F+K+ F S EL+ M L+THLP SFI+ E VK M
Sbjct: 235 EAEKKKKGADKKPKAIKILTFGEFVKKTFDGFSEELEKGMVDLWTHLPKSFITSENVKSM 294
Query: 241 FRAQDLLRSLEMSLRQAKFKQSGADNDNESILSSLGWSSYERVECLGILNSLSKSIPLPE 300
A+ L+ + L++ F + + G S+Y CL IL L + + +
Sbjct: 295 VTARKALQRVRYFLKE-NFSRDDFKKGSLKFDCFNGVSAY----CLQILRLLPERFEVSD 349
Query: 301 VDLEGGVAKFCLSKASIILCTATSSIKLDAQGENPVQFLVIDEAAQLKECESTIPLQLSG 360
+ FCL A II CTA+ + ++ V LV+DEAAQLKECES LQLSG
Sbjct: 350 MLENNDTKTFCLQNADIIFCTASGAADMNPIRTGSVDLLVVDEAAQLKECESVAALQLSG 409
Query: 361 LSHCILIGDERQLPALVKSRIADKAEFGRSLFERLVMLGYKKHMLNVQYRMHPSISLFPC 420
L H +LIGDE QLPA+V ++A+FGRSLFERLV+LG+ KH+LNVQYRMHPSIS FP
Sbjct: 410 LRHAVLIGDELQLPAMVH----NEAKFGRSLFERLVLLGHNKHLLNVQYRMHPSISRFPN 465
Query: 421 KEFYDEKLSDAPTVREKSYDRSFLDGELFGSYSFIHIAKGKEQFGREHSLKNQVEAAVIS 480
KEFY ++ DA V+E Y + FL G +FGS+SFI++ +G+E+FG HS KN VE AVIS
Sbjct: 466 KEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFINVGRGEEEFGDGHSPKNMVEVAVIS 525
Query: 481 EIVGRLKK 488
EI+ L K
Sbjct: 526 EIISNLFK 533
>AT5G37150.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:14701330-14704562
FORWARD LENGTH=839
Length = 839
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/492 (43%), Positives = 295/492 (59%), Gaps = 55/492 (11%)
Query: 3 NCCHNNT-KLIWGPPGTGKTKTVACLLFSFLKLKARTLAFAPTNTAVLEVAVRLHSLF-- 59
NC H N+ KLIWGPPGTGKTKTVA LLF+ LKL+ +T+ APTNTA+++VA RL SLF
Sbjct: 237 NCTHKNSVKLIWGPPGTGKTKTVATLLFALLKLRCKTVVCAPTNTAIVQVASRLLSLFKE 296
Query: 60 TGSNEHKTYGMGDILLFGNRSRMKV-DSYQGLRDMFLDYRVEDLKKCLDPSTGWKHILES 118
++E+ TY +G+I+L GNR RM + + L D+FLD R+ L K P +GW LES
Sbjct: 297 NSTSENATYRLGNIILSGNRDRMGIHKNDHVLLDVFLDERIGKLGKLFSPFSGWMQRLES 356
Query: 119 MIQLLEEPRKQYILYENKKGLMSLQDFAMRNDFHIVHAYRLYKRSQGNDDSVSFEEFVQI 178
+IQ LE P + YE H Y L + + +++ E V
Sbjct: 357 LIQFLENPEGK---YER-------------------HVYELEEVERMEEEAERQEVVV-- 392
Query: 179 KSKALAEQYQSYKNDKKKNILTMDDFLKQEFKVLSVELKLFMQTLYTHLPSSFISLETVK 238
NI T+ +F+K+ F LS E++ + L+THLP ++ + VK
Sbjct: 393 ------------------NIPTIGEFVKKNFNSLSEEVETCIVDLFTHLPKVYLPYDDVK 434
Query: 239 EMFRAQDLLRSLEMSLRQAKFKQSGADNDNESILSSLGWSSYER--VECLGILNSLSKSI 296
M ++ L+ + LR+ S D + + + ++R V+CL L L K
Sbjct: 435 IMIASRQSLQRIRYFLRE---NSSRVDFEE----GNFRFDCFKRLSVDCLKALRLLPKRF 487
Query: 297 PLPEVDLEGGVAKFCLSKASIILCTATSSIKLDAQGENPVQFLVIDEAAQLKECESTIPL 356
+P++ + KFCL A IILCTA+ + +++ + V+ LV+DEAAQLKECES L
Sbjct: 488 EIPDMLENEDIRKFCLQNADIILCTASGAAEMNVERTGNVELLVVDEAAQLKECESVAAL 547
Query: 357 QLSGLSHCILIGDERQLPALVKSRIADKAEFGRSLFERLVMLGYKKHMLNVQYRMHPSIS 416
QL GL H ILIGDE QLPA+V + + +KA+FGRSLFERLV+LG+ KH+L+VQYRMHPSIS
Sbjct: 548 QLPGLRHAILIGDEFQLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHLLDVQYRMHPSIS 607
Query: 417 LFPCKEFYDEKLSDAPTVREKSYDRSFLDGELFGSYSFIHIAKGKEQFGREHSLKNQVEA 476
FP KEFY ++ DA V+E Y + FL G +FGS+SFI++ +GKE+FG HS KN VE
Sbjct: 608 RFPNKEFYGGRIKDAENVKESIYQKRFLQGNMFGSFSFINVGRGKEEFGDGHSPKNMVEV 667
Query: 477 AVISEIVGRLKK 488
AV+SEI+ L K
Sbjct: 668 AVVSEIISNLFK 679
>AT5G52090.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:21167432-21169462
REVERSE LENGTH=676
Length = 676
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/492 (43%), Positives = 290/492 (58%), Gaps = 55/492 (11%)
Query: 3 NCCHNNT-KLIWGPPGTGKTKTVACLLFSFLKLKARTLAFAPTNTAVLEVAVRLHSLF-- 59
NC H N+ KLIWGPP TGKTKTVA LLF+ LKL+ +T+ APTNTA+++V RL SLF
Sbjct: 74 NCTHKNSVKLIWGPPRTGKTKTVATLLFALLKLRCKTVVCAPTNTAIVQVTSRLLSLFKE 133
Query: 60 TGSNEHKTYGMGDILLFGNRSRMKVDSYQG-LRDMFLDYRVEDLKKCLDPSTGWKHILES 118
+ E+ TY +G+I+L GNR RM ++ L D+FLD R+ L K P +GW LES
Sbjct: 134 NSTAENATYRLGNIILSGNRDRMGINKNDHVLLDVFLDERIGKLGKLFSPFSGWMQRLES 193
Query: 119 MIQLLEEPRKQYILYENKKGLMSLQDFAMRNDFHIVHAYRLYKRSQGNDDSVSFEEFVQI 178
+IQ LE P +Y H Y L EE ++
Sbjct: 194 LIQFLENPEGKYER----------------------HVYEL-------------EEVERM 218
Query: 179 KSKALAEQYQSYKNDKKKNILTMDDFLKQEFKVLSVELKLFMQTLYTHLPSSFISLETVK 238
+ E+ NI T +F+++ F LS E+K + LYTHLP ++ E VK
Sbjct: 219 NEEDEREEVVV-------NIPTFGEFVQKNFNSLSEEVKTCIVDLYTHLPKVYLPYEDVK 271
Query: 239 EMFRAQDLLRSLEMSLRQAKFKQSGADNDNESILSSLGWSSYERV--ECLGILNSLSKSI 296
+M ++ L+ + LR+ S D + + + ++R+ +CL L L K
Sbjct: 272 KMIASRQTLQRIRYFLRE---NSSRVDFEE----GNFRFDCFKRLSDDCLKALRLLPKRF 324
Query: 297 PLPEVDLEGGVAKFCLSKASIILCTATSSIKLDAQGENPVQFLVIDEAAQLKECESTIPL 356
+P++ + KFCL A IILCTA+ + +++ + V+ LV+DEAAQLKECES L
Sbjct: 325 EIPDMLENEDIRKFCLQNADIILCTASGAAEMNVERTGNVELLVVDEAAQLKECESVAAL 384
Query: 357 QLSGLSHCILIGDERQLPALVKSRIADKAEFGRSLFERLVMLGYKKHMLNVQYRMHPSIS 416
QL GL H ILIGDE QLPA+V + + +KA+FGRSLFERLV+LG+ KH+L+VQYRMHPSIS
Sbjct: 385 QLPGLRHAILIGDEFQLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHLLDVQYRMHPSIS 444
Query: 417 LFPCKEFYDEKLSDAPTVREKSYDRSFLDGELFGSYSFIHIAKGKEQFGREHSLKNQVEA 476
FP KEFY ++ DA V+E Y + FL G +F S+SFI++ +GKE+FG HS KN VE
Sbjct: 445 RFPNKEFYGGRIKDAENVKESIYQKRFLKGNMFDSFSFINVGRGKEEFGDGHSPKNMVEV 504
Query: 477 AVISEIVGRLKK 488
AVISEI+ L K
Sbjct: 505 AVISEIISNLYK 516
>AT4G05540.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:2818776-2821065
REVERSE LENGTH=689
Length = 689
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/494 (43%), Positives = 289/494 (58%), Gaps = 54/494 (10%)
Query: 8 NTKLIWGPPGTGKTKTVACLLFSFLKLKARTLAFAPTNTAVLEVAVRLHSLF--TGSNEH 65
+ KLIWGPPGTG TKTVA LLF+ L L +T+ PTNTAV+ VA RL +LF + S EH
Sbjct: 131 SVKLIWGPPGTGNTKTVATLLFALLSLSCKTVVCTPTNTAVVAVASRLLALFKESSSTEH 190
Query: 66 KTYGMGDILLFGNRSRMKVD--SYQGLRDMFLDYRVEDLKKCLDPSTGWKHILESMIQLL 123
TYG+G+I+L GNR RM +D L ++FLD R+ L + PS W+ LE++I +L
Sbjct: 191 STYGLGNIVLVGNRVRMGIDERGNDDLLNVFLDDRISKLGELFSPSNEWERSLEAVIDIL 250
Query: 124 EEPR---KQYILYENKKGLMSLQDFAMRNDFHIVHAYRLYKRSQGNDDSVSFEEFVQ--- 177
E K+Y+L +K + + + +F EFV
Sbjct: 251 ENAESSYKKYLLLSERK-----------------------ENQETKNILTAFGEFVMKMF 287
Query: 178 IKSKALAEQYQSYKNDKKKNILTMDDFLKQEFKVLSVELKLF---MQTLYTHLPSSFISL 234
+ SK E+ + ILT +F+ ++F LS +K M LYTHLP SF+S
Sbjct: 288 LGSKETPEKEEEI-------ILTFGEFVMEKFDGLSETMKKIQKDMVDLYTHLPKSFLSS 340
Query: 235 ETVKEMFRAQDLLRSLEMSLRQAKFKQSGADNDNESILSSLGWSSYERVECLGILNSLSK 294
VK M A+ LR L++ KQ D ++ + V+CL L LSK
Sbjct: 341 NDVKNMIVARQALRQARTFLQE---KQGSFTFD--------CFNKFVCVDCLRTLRLLSK 389
Query: 295 SIPLPEVDLEGGVAKFCLSKASIILCTATSSIKLDAQGENPVQFLVIDEAAQLKECESTI 354
+P + ++ + FCL A II CTA+ + ++ A+ + LV+DEAAQLKECES
Sbjct: 390 RFEIPALLMKEDIRTFCLQNAHIIFCTASGAAEMTAERAGSIDMLVVDEAAQLKECESVA 449
Query: 355 PLQLSGLSHCILIGDERQLPALVKSRIADKAEFGRSLFERLVMLGYKKHMLNVQYRMHPS 414
LQL GL H +LIGDE QLPA+V+S + +KA+F RSLFERL LG+KKH+LNVQYRMHPS
Sbjct: 450 ALQLQGLHHAVLIGDELQLPAMVQSEVCEKAKFVRSLFERLDSLGHKKHLLNVQYRMHPS 509
Query: 415 ISLFPCKEFYDEKLSDAPTVREKSYDRSFLDGELFGSYSFIHIAKGKEQFGREHSLKNQV 474
ISLFP EFY K+SDA V+E +Y + FL G +FGS+SFI++ GKE+FG HS KN V
Sbjct: 510 ISLFPNMEFYGGKISDAEIVKESTYQKRFLQGNMFGSFSFINVGLGKEEFGDGHSPKNMV 569
Query: 475 EAAVISEIVGRLKK 488
E AV+SEI+ L K
Sbjct: 570 EIAVVSEILTNLLK 583
>AT1G65780.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:24462958-24466888
REVERSE LENGTH=1065
Length = 1065
Score = 357 bits (917), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 203/464 (43%), Positives = 282/464 (60%), Gaps = 41/464 (8%)
Query: 4 CCHNNT-KLIWGPPGTGKTKTVACLLFSFLKLKARTLAFAPTNTAVLEVAVRLHSLFTGS 62
C H NT +LIWGPPGTGKTKT + LLF+ L K RTL PTN +VLEVA R+ L +GS
Sbjct: 255 CYHANTVRLIWGPPGTGKTKTTSVLLFTLLNAKCRTLTCGPTNVSVLEVASRVLKLVSGS 314
Query: 63 NEHKTYGMGDILLFGNRSRMKVDSYQGLRDMFLDYRVEDLKKCLDPSTGWKHILESMIQL 122
+ YG+GD++LFGN RMK+ + L ++F+D RV+ L C P GWK ++ MI+L
Sbjct: 315 LKIGNYGLGDVVLFGNDERMKIKDRKDLVNIFIDERVDKLYPCFMPFYGWKATIDGMIRL 374
Query: 123 LEEPRKQYILYENKKGLMSLQDFAMRNDFHIVHAYRLYKRSQGNDDSVSFEEFVQIKSKA 182
LE+P+ QY LY L++ A N+ ++KR +GN+ + E V+ S
Sbjct: 375 LEDPKGQYNLY--------LENLARANNVKRKDTGSVFKR-KGNEQN---ENIVEQVSDT 422
Query: 183 LAEQYQSYKNDKKKNILTMDDFLKQEFKVLSVELKLFMQTLYTHLPSSFISLETVKEMFR 242
+ +Q D+L ++F L +L L +L THLP++ +S + M+
Sbjct: 423 RPQSFQ--------------DYLPEKFSELRKDLDLHFSSLCTHLPTALLSSQAATRMYE 468
Query: 243 AQDLLRSLEMSLRQAKFKQSGADNDNESILSSLGWSS------YERVE--CLGILNSLSK 294
A DL+R + + G +S+L G S + VE L +L S+ +
Sbjct: 469 AIDLVRDVTILAILDGVTGEGV----KSVLIPNGEGSDRFSSQHVTVEDDYLKLLRSIPE 524
Query: 295 SIPLPEVDLEGGVAKFCLSKASIILCTATSSIKLDAQGENPVQFLVIDEAAQLKECESTI 354
PLP V + + CL A ++ TA+ S +L P+Q LVIDEAAQLKECES+I
Sbjct: 525 IFPLPAVSDRHLIKELCLGHACLLFSTASCSARLYTG--TPIQLLVIDEAAQLKECESSI 582
Query: 355 PLQLSGLSHCILIGDERQLPALVKSRIADKAEFGRSLFERLVMLGYKKHMLNVQYRMHPS 414
P+QL GL H IL+GDERQLPA+V+S+IA +A FGRSLFERL +LG+KK+MLN+QYRMH S
Sbjct: 583 PMQLPGLRHLILVGDERQLPAMVESQIALEAGFGRSLFERLALLGHKKYMLNIQYRMHCS 642
Query: 415 ISLFPCKEFYDEKLSDAPTVREKSYDRSFLDGELFGSYSFIHIA 458
IS FP KE Y +K+ DAPTVR+++Y + +L GE++G YSFI+IA
Sbjct: 643 ISSFPNKELYGKKILDAPTVRQRNYTKQYLPGEMYGPYSFINIA 686
>AT5G37160.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:14705426-14708376
FORWARD LENGTH=871
Length = 871
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/269 (47%), Positives = 167/269 (62%), Gaps = 4/269 (1%)
Query: 220 MQTLYTHLPSSFISLETVKEMFRAQDLLRSLEMSLRQAKFKQSGADNDNESILSSLGWSS 279
M L THLP SFIS + VK + A L + L++ S D+ + ++
Sbjct: 448 MADLSTHLPKSFISSKDVKNLIAACQALHRVRYFLQE----NSSRDDFKKGGFRFNCFNK 503
Query: 280 YERVECLGILNSLSKSIPLPEVDLEGGVAKFCLSKASIILCTATSSIKLDAQGENPVQFL 339
V+ L L L K + + + KFCL A II CTA+S ++ V L
Sbjct: 504 LISVDALQALCLLPKCFGIFGLANNEDIRKFCLQNADIIFCTASSVANINPARIGSVDLL 563
Query: 340 VIDEAAQLKECESTIPLQLSGLSHCILIGDERQLPALVKSRIADKAEFGRSLFERLVMLG 399
V+DE AQLKECES LQL GL H +LIGDE QLPA+V + DKA+FGRSLFERLV++G
Sbjct: 564 VVDETAQLKECESVAALQLPGLCHALLIGDEYQLPAMVHNEECDKAKFGRSLFERLVLIG 623
Query: 400 YKKHMLNVQYRMHPSISLFPCKEFYDEKLSDAPTVREKSYDRSFLDGELFGSYSFIHIAK 459
+ KH+LNVQYRMHPSIS FP KEFY +++DA V+E Y++ FL G +FG++SFI++ +
Sbjct: 624 HSKHLLNVQYRMHPSISRFPNKEFYGGRITDAANVQESIYEKRFLQGNMFGTFSFINVGR 683
Query: 460 GKEQFGREHSLKNQVEAAVISEIVGRLKK 488
GKE+FG HS KN VE AVIS+I+ L K
Sbjct: 684 GKEEFGDGHSPKNMVEVAVISKIISNLFK 712
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 90/163 (55%), Gaps = 29/163 (17%)
Query: 3 NCCHNNT-KLIWGPPGTGKTKTVACLLFSFLKLKARTLAFAPTNTAVLEVAVRLHS---- 57
NC H + KLIWGPPGTGKTKTVA LL + ++LK +T+ APTNT ++ VA RL S
Sbjct: 260 NCKHKESVKLIWGPPGTGKTKTVATLLSTLMQLKCKTVVCAPTNTTIVAVASRLLSLSKE 319
Query: 58 ----------------------LFTGSN--EHKTYGMGDILLFGNRSRMKVDSYQGLRDM 93
LF G++ E TYGMG+I+L GNR RM + S + L ++
Sbjct: 320 TIVCAPTNSAIAEVVSRFEFSTLFYGTSILERTTYGMGNIVLSGNRERMGITSNKVLLNV 379
Query: 94 FLDYRVEDLKKCLDPSTGWKHILESMIQLLEEPRKQYILYENK 136
F + RV L + + GWK LES+I LE +Y + N+
Sbjct: 380 FFNDRVSKLGRLFLSTCGWKKRLESIIDFLENTETKYEQHVNE 422
>AT5G37030.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:14634614-14636939
REVERSE LENGTH=638
Length = 638
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/153 (62%), Positives = 118/153 (77%)
Query: 336 VQFLVIDEAAQLKECESTIPLQLSGLSHCILIGDERQLPALVKSRIADKAEFGRSLFERL 395
++ LV+DEAAQLKECES LQL GL H ILIGDE QLPA+V + +KA+FGRSLFERL
Sbjct: 348 IEVLVVDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNDQCEKAKFGRSLFERL 407
Query: 396 VMLGYKKHMLNVQYRMHPSISLFPCKEFYDEKLSDAPTVREKSYDRSFLDGELFGSYSFI 455
V+LG+KKH+L+VQYRMHPSIS FP KEFY ++ DA V+E Y + FL G +FGS+SFI
Sbjct: 408 VLLGHKKHLLDVQYRMHPSISRFPYKEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFI 467
Query: 456 HIAKGKEQFGREHSLKNQVEAAVISEIVGRLKK 488
++ +GKE+FG S KN VE AV+SEI+ L K
Sbjct: 468 NVGRGKEEFGDGDSPKNMVEVAVVSEIISNLFK 500
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 7 NNTKLIWGPPGTGKTKTVACLLFSFLKLKARTLAFAPTNTAVLEVAVRLHSLFTGSNEHK 66
N+ KLIWGP KTKTVA LL LKL+ +T+ APTNTA++EV RL +L +EH
Sbjct: 225 NSVKLIWGPL---KTKTVATLLLVLLKLRCKTVVCAPTNTAIVEVTSRLLALSNKYSEHA 281
Query: 67 TYGMGDILLFGNRSRMKVDSYQGLRDMFLDYRVEDLKKCLDPSTGWKHILESMIQLLE 124
TYG+G+I L GN+ RM++ LR++FLD+R+ L+K + GWK LES+I LLE
Sbjct: 282 TYGLGNIFLAGNQKRMRIKDTDYLRNVFLDHRISKLRKLFLSTCGWKQSLESIIDLLE 339
>AT4G15570.1 | Symbols: MAA3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr4:8893043-8898858 FORWARD LENGTH=818
Length = 818
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 81/152 (53%), Gaps = 3/152 (1%)
Query: 312 LSKASIILCTAT-SSIKLDAQGENPVQFLVIDEAAQLKECESTIPLQLSGLSHCILIGDE 370
L +A+I+ T + S L A+ ++IDEAAQ E + IPL + L+GD
Sbjct: 459 LEEAAIVFATLSFSGSALLAKSNRGFDVVIIDEAAQAVEPATLIPLA-TRCKQVFLVGDP 517
Query: 371 RQLPALVKSRIADKAEFGRSLFERLVMLGYKKHMLNVQYRMHPSISLFPCKEFYDEKLSD 430
+QLPA V S +A + +G S+FERL GY ML QYRMHP I FP K+FY+ L D
Sbjct: 518 KQLPATVISTVAQDSGYGTSMFERLQKAGYPVKMLKTQYRMHPEIRSFPSKQFYEGALED 577
Query: 431 APTVREKSYDRSFLDGELFGSYSFIHIAKGKE 462
+ E R + FG + F I +GKE
Sbjct: 578 GSDI-EAQTTRDWHKYRCFGPFCFFDIHEGKE 608
>AT1G16800.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:5745523-5755263
REVERSE LENGTH=2127
Length = 2127
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 86/159 (54%), Gaps = 5/159 (3%)
Query: 333 ENPVQFLVIDEAAQLKECESTIPLQL--SGLSHCILIGDERQLPALVKSRIADKAEFGRS 390
+N +VIDEAAQ E + IPLQL S + CI++GD +QLPA V S +A K + S
Sbjct: 1614 DNLFDAVVIDEAAQALEPATLIPLQLLKSRGTKCIMVGDPKQLPATVLSNVASKFLYECS 1673
Query: 391 LFERLVMLGYKKHMLNVQYRMHPSISLFPCKEFYDEKLSDAPTVREKSYDRSFLDGELFG 450
+FERL GY ML QYRMHP I FP FYD KL + + KS F + G
Sbjct: 1674 MFERLQRAGYPILMLTQQYRMHPEICRFPSMHFYDNKLLNGVDMSSKSA--PFHENHHLG 1731
Query: 451 SYSFIHIAKGKE-QFGREHSLKNQVEAAVISEIVGRLKK 488
Y F I G+E + G S+ N+ EA +++ KK
Sbjct: 1732 PYVFYDIVDGQEHRSGDSSSVCNEQEAEAAVQLLRFFKK 1770
>AT4G30100.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:14714191-14719335
FORWARD LENGTH=1311
Length = 1311
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 313 SKASIILCTATSS-IKLDAQGENPVQFLVIDEAAQLKECESTIPLQLSGLSHCILIGDER 371
++A I+ T +SS KL ++ + +VIDEAAQ E PL L G + C+L+GD +
Sbjct: 914 NEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLAL-GAARCVLVGDPQ 972
Query: 372 QLPALVKSRIADKAEFGRSLFERLVMLGYKKHMLNVQYRMHPSISLFPCKEFYDEKLSDA 431
QLPA V S+ A + RSLFER + G +L VQYRMHP I FP + FY +L+D+
Sbjct: 973 QLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYFYQGRLTDS 1032
Query: 432 PTVREKSYDRSFLDGELFGSYSFIHIAKGKE 462
+V + D + + Y F I+ G+E
Sbjct: 1033 ESV-STAPDEIYYKDSVLKPYLFFDISHGRE 1062
>AT2G19120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:8287036-8291802
REVERSE LENGTH=1090
Length = 1090
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 313 SKASIILCTATSS-IKLDAQGENPVQFLVIDEAAQLKECESTIPLQLSGLSHCILIGDER 371
++A I+ T +SS KL ++ + +VIDEAAQ E PL L G + C+L+GD +
Sbjct: 751 NEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLAL-GAARCVLVGDPQ 809
Query: 372 QLPALVKSRIADKAEFGRSLFERLVMLGYKKHMLNVQYRMHPSISLFPCKEFYDEKLSDA 431
QLPA V S+ A + RSLFER + G +L VQYRMHP I FP + FY +L D+
Sbjct: 810 QLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYFYQGRLKDS 869
Query: 432 PTVREKSYDRSFLDGELFGSYSFIHIAKGKE 462
++ + D + + Y F +I+ G+E
Sbjct: 870 ESI-SSAPDEIYYKDPVLRPYLFFNISHGRE 899
>AT5G47010.1 | Symbols: UPF1, LBA1, ATUPF1 | RNA helicase, putative
| chr5:19072009-19078856 FORWARD LENGTH=1254
Length = 1254
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 86/170 (50%), Gaps = 3/170 (1%)
Query: 315 ASIILCTATSSIKLDAQGENPVQFLVIDEAAQLKECESTIPLQLSGLSHCILIGDERQLP 374
A +I CT + L Q L IDE+ Q E E IPL L G+ +L+GD QL
Sbjct: 630 ADVICCTCVGAADLRLSNFRFRQVL-IDESTQATEPECLIPLVL-GVKQVVLVGDHCQLG 687
Query: 375 ALVKSRIADKAEFGRSLFERLVMLGYKKHMLNVQYRMHPSISLFPCKEFYDEKLSDAPTV 434
++ + A +A +SLFERLV LG K L VQYRMHP++S FP FY+ L + T+
Sbjct: 688 PVIMCKKAARAGLAQSLFERLVTLGIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTI 747
Query: 435 REKSYDRSFLDGELFGSYSFIHIAKGKEQFGREH-SLKNQVEAAVISEIV 483
E+ + F ++ G+E+ S N+ EAA + ++V
Sbjct: 748 IERQTTGIDFPWPVPNRPMFFYVQLGQEEISASGTSYLNRTEAANVEKLV 797
>AT2G03270.1 | Symbols: | DNA-binding protein, putative |
chr2:994071-995990 FORWARD LENGTH=639
Length = 639
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 69/128 (53%), Gaps = 9/128 (7%)
Query: 311 CLSKASIILCTATSSI--KLDAQGENPVQFLVIDEAAQLKECESTIPLQLSGLSHCILIG 368
+ A +IL T T ++ KLD + ++IDE AQ E I L L G S CIL G
Sbjct: 339 VIKNADVILTTLTGALTRKLDNR---TFDLVIIDEGAQALEVACWIAL-LKG-SRCILAG 393
Query: 369 DERQLPALVKSRIADKAEFGRSLFERLVML--GYKKHMLNVQYRMHPSISLFPCKEFYDE 426
D QLP ++S A++ GR+LFERL L K ML VQYRMH I + KE YD
Sbjct: 394 DHLQLPPTIQSAEAERKGLGRTLFERLADLYGDEIKSMLTVQYRMHELIMNWSSKELYDN 453
Query: 427 KLSDAPTV 434
K++ +V
Sbjct: 454 KITAHSSV 461
>AT1G05460.1 | Symbols: SDE3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:1601357-1604658 REVERSE LENGTH=1002
Length = 1002
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 19/191 (9%)
Query: 311 CLSKASIILCTATSSIKLDAQGENPVQF--LVIDEAAQLKECESTIPLQLSGLSHCILI- 367
L++ +++ T S+ L+A+G N F +++DEA Q E E+ I + L+ +++
Sbjct: 512 ALTRYKLVVSTYMSASLLNAEGVNRGHFTHILLDEAGQASEPENMIAVSNLCLTETVVVL 571
Query: 368 -GDERQLPALVKSRIADKAEFGRSLFERLVMLGY-----KKHMLNV--QYRMHPSISLFP 419
GD RQL ++ SR A+ G+S ERL Y + ++ + YR HP I P
Sbjct: 572 AGDPRQLGPVIYSRDAESLGLGKSYLERLFECDYYCEGDENYVTKLVKNYRCHPEILDLP 631
Query: 420 CKEFYDEKL----SDAPTVREKSYDRSFLDGELFGSYSFIHIAKGKEQFGREHSLKNQVE 475
K FYD +L D +V +FL + F F I E+ G S N++E
Sbjct: 632 SKLFYDGELVASKEDTDSVLAS---LNFLPNKEF-PMVFYGIQGCDEREGNNPSWFNRIE 687
Query: 476 AAVISEIVGRL 486
+ + E + RL
Sbjct: 688 ISKVIETIKRL 698
>AT5G35970.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:14119060-14123078
REVERSE LENGTH=961
Length = 961
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 312 LSKASIILCTATSSIKLDAQGENPVQFLVIDEAAQLKECESTIPLQLSGLSHCILIGDER 371
LS A ++ T + + +VIDEA Q E IP+ L G CIL GD
Sbjct: 638 LSNAQVVFATNIGAADPLIRRLETFDLVVIDEAGQSIEPSCWIPI-LQG-KRCILSGDPC 695
Query: 372 QLPALVKSRIADKAEFGRSLFERLVML--GYKKHMLNVQYRMHPSISLFPCKEFYDEKLS 429
QL +V SR A + G SL ER L G L QYRM+ I+ + KE Y L
Sbjct: 696 QLAPVVLSRKALEGGLGVSLLERAASLHDGVLATKLTTQYRMNDVIAGWASKEMYGGWLK 755
Query: 430 DAPTV 434
AP+V
Sbjct: 756 SAPSV 760
>AT2G38770.1 | Symbols: EMB2765 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:16203185-16210253 REVERSE LENGTH=1509
Length = 1509
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 339 LVIDEAAQLKECESTIPLQL-------SGLSHCILIGDERQLPALVKSRIADK-AEFGRS 390
L+++E+AQ+ E E+ IP+ L + L CILIGD QLP +VK+ K + +S
Sbjct: 1120 LLMEESAQILEIETFIPMLLQRQEDGHARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQS 1179
Query: 391 LFERLVMLGYKKHMLNVQYRMHPSIS 416
LF R V LG LN Q R PS++
Sbjct: 1180 LFTRFVRLGIPYIELNAQGRARPSLA 1205