Miyakogusa Predicted Gene

Lj0g3v0358599.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0358599.1 Non Chatacterized Hit- tr|I1MTN1|I1MTN1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5527
PE=,93.78,0,seg,NULL; PUTATIVE UNCHARACTERIZED PROTEIN,NULL;
TRANSPORTIN 3 AND IMPORTIN 13,NULL; ARM repeat,Arma,CUFF.24686.1
         (547 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G62600.1 | Symbols:  | ARM repeat superfamily protein | chr5:...   842   0.0  
AT1G12930.1 | Symbols:  | ARM repeat superfamily protein | chr1:...    67   4e-11

>AT5G62600.1 | Symbols:  | ARM repeat superfamily protein |
           chr5:25123337-25132473 REVERSE LENGTH=958
          Length = 958

 Score =  842 bits (2174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/547 (76%), Positives = 460/547 (84%), Gaps = 1/547 (0%)

Query: 1   MELQNTVKEALNALYHHPDDTVRMQADRYLQEFQRTLDAWQVADNLLHDPSSNLETLIFC 60
           ME QN VKEALNALYHHPDDTVR+ ADR+LQ FQ TLDAWQVADNLLHD SSNLETLIFC
Sbjct: 1   MEHQNAVKEALNALYHHPDDTVRVHADRWLQNFQGTLDAWQVADNLLHDSSSNLETLIFC 60

Query: 61  SQTLRSKVQRDFEELPATAFRPLRDSLNNLLKKFHKGPPKVRTQISIAVAALAVHVPAED 120
           SQTLRSKVQRDFEELP  AF+ LR SL  LLKKFHKGPPKVRTQISIAVAALAVHVPA D
Sbjct: 61  SQTLRSKVQRDFEELPPGAFQKLRQSLTTLLKKFHKGPPKVRTQISIAVAALAVHVPAAD 120

Query: 121 WGDGGIVKWLRDEMDSHPEYIPGFXXXXXXXXXXXXNYKIAARPERRRQFEKELTSQLEV 180
           WGDGGI+ WLRDEM  HPEY+PGF            NYKIAARP+RRRQFEKELTSQ+E 
Sbjct: 121 WGDGGIISWLRDEMHMHPEYVPGFLELLTVLPEETFNYKIAARPDRRRQFEKELTSQMEA 180

Query: 181 ALNILTACLAISELKEQVLEAFASWLRLKHGIPGSVLSSHPLVLTALSSLNSDLLSEASV 240
           AL+IL+ACL ISELKEQVLEAFASWLRL+HGIPG+VL+ HPLV  ALSSLN D LSEASV
Sbjct: 181 ALSILSACLKISELKEQVLEAFASWLRLRHGIPGTVLACHPLVHAALSSLNCDPLSEASV 240

Query: 241 NVILELIHYTAVANIDGVSANMPLIQVIVPQVMNLKAQLSDSTKDEEDVKAIARLFADMG 300
           NVI ELIH+TA  +  G+SA  PLIQVIVPQ+++L+A L DS+KDEEDVKAI RLFAD+G
Sbjct: 241 NVISELIHHTASPSSGGISAQTPLIQVIVPQILSLQAHLRDSSKDEEDVKAIGRLFADVG 300

Query: 301 DSYVELIATGSDESMLIVQALLEVASHPEYDIASMTFNFWHSLQLNLTKKESYISYGTEA 360
           DSYVELIATGSDE M+IV ALLEV +HPE+DIASMTFNFWHSLQL LTK+ESY S G+EA
Sbjct: 301 DSYVELIATGSDEPMVIVHALLEVTAHPEFDIASMTFNFWHSLQLMLTKRESYSSLGSEA 360

Query: 361 CIEAERNRRLQVFRPAYESLVSLVSYRVQYPEDYQDLSYEDLKEFKQTKYAVADVLTDAA 420
            IE ERNRRL +F+PAY+SLVSLV +RVQYPEDYQ LSYEDLKEFKQT+YAVADVL DAA
Sbjct: 361 SIEVERNRRLHIFQPAYQSLVSLVGFRVQYPEDYQGLSYEDLKEFKQTRYAVADVLIDAA 420

Query: 421 SVLSGDATLRILYMKLLEAVSGHGNSEQKEWRPAEAALFCIRAISNYVSVVEAEVMPQIM 480
            +L GD TL+ILYMKLLEA +  GN+ Q +WRPAEA LFCI AISNYVSVVEAEVMPQ+M
Sbjct: 421 LILGGDTTLKILYMKLLEANAQTGNNFQ-DWRPAEAILFCIWAISNYVSVVEAEVMPQVM 479

Query: 481 AXXXXXXXXXXXXXTVCLTIGAYSKWLDSASCGVSILPSVLDILMNGMGTSEDCAAAAAL 540
           A             T CL +GAYSKWL++A   VSILPS++ ILM+GMGTSEDCAAAAAL
Sbjct: 480 ALLQNLPQQAQLLQTACLLVGAYSKWLNAAPASVSILPSIIRILMSGMGTSEDCAAAAAL 539

Query: 541 AFRHICD 547
           AFRH CD
Sbjct: 540 AFRHTCD 546


>AT1G12930.1 | Symbols:  | ARM repeat superfamily protein |
           chr1:4398588-4405495 REVERSE LENGTH=1005
          Length = 1005

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/106 (38%), Positives = 63/106 (59%), Gaps = 1/106 (0%)

Query: 1   MELQNTVKEALNALYHHPDDTVRMQADRYLQEFQRTLDAWQVADNLLHDPSSNLETL-IF 59
           MELQ  V EA++ L H P+ + R+ A+++L +FQ T  AW V+ +LL  P  +L  L  F
Sbjct: 1   MELQRKVAEAIHVLNHDPESSNRVAANQWLVQFQLTPAAWDVSTSLLTSPIVSLFDLQFF 60

Query: 60  CSQTLRSKVQRDFEELPATAFRPLRDSLNNLLKKFHKGPPKVRTQI 105
            +Q LR K+Q +   L +TA   L ++L    K++  G P++ TQI
Sbjct: 61  AAQILRRKIQNEASNLQSTAKDALLNALLLAAKRYSSGVPQLLTQI 106