Miyakogusa Predicted Gene

Lj0g3v0357619.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0357619.1 Non Chatacterized Hit- tr|I1N6P3|I1N6P3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.47847
PE,59.26,0.000000000001,zf-4CXXC_R1,Zinc-finger domain of
monoamine-oxidase A repressor R1,CUFF.24609.1
         (92 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G67270.1 | Symbols:  | Zinc-finger domain of monoamine-oxidas...    65   7e-12
AT1G67780.1 | Symbols:  | Zinc-finger domain of monoamine-oxidas...    65   1e-11
AT5G38690.1 | Symbols:  | Zinc-finger domain of monoamine-oxidas...    64   3e-11
AT2G23530.1 | Symbols:  | Zinc-finger domain of monoamine-oxidas...    47   2e-06

>AT1G67270.1 | Symbols:  | Zinc-finger domain of monoamine-oxidase
          A repressor R1 protein | chr1:25183177-25185793 REVERSE
          LENGTH=541
          Length = 541

 Score = 65.5 bits (158), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 39/63 (61%), Gaps = 2/63 (3%)

Query: 15 ECRRKIQGVAP--SNLRNGKPCEIRFCRLCLSIRYGEEAPQVVLLDDWSCPKCRGKCNCS 72
          +CR+K    A     +R  K C I+FC  CLSIRYGE A +V  LDDW CP CRG C CS
Sbjct: 29 QCRQKTLDFAAPCKAMRRKKLCPIKFCYKCLSIRYGENAEEVAKLDDWICPLCRGICICS 88

Query: 73 TCR 75
           CR
Sbjct: 89 VCR 91


>AT1G67780.1 | Symbols:  | Zinc-finger domain of monoamine-oxidase
          A repressor R1 protein | chr1:25412816-25415530 FORWARD
          LENGTH=512
          Length = 512

 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 38/63 (60%), Gaps = 2/63 (3%)

Query: 15 ECRRKIQGVAPS--NLRNGKPCEIRFCRLCLSIRYGEEAPQVVLLDDWSCPKCRGKCNCS 72
          +CR+K      S   ++  K C I FC  CL  RYGE A +V  LDDW CP+CRG CNCS
Sbjct: 37 QCRQKTMDFVASCKAMKKDKQCTINFCHKCLINRYGENAEEVAKLDDWICPQCRGICNCS 96

Query: 73 TCR 75
           CR
Sbjct: 97 FCR 99


>AT5G38690.1 | Symbols:  | Zinc-finger domain of monoamine-oxidase
          A repressor R1 protein | chr5:15479424-15482992 REVERSE
          LENGTH=572
          Length = 572

 Score = 63.5 bits (153), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 2/62 (3%)

Query: 15 ECRRKIQGVAPSNL--RNGKPCEIRFCRLCLSIRYGEEAPQVVLLDDWSCPKCRGKCNCS 72
          +CR+K   +  S +  +  K C I+ C  C+  RYGE A +V L  DW CPKCRG CNCS
Sbjct: 34 QCRQKRTDLVGSCVTKKKDKTCPIKLCTKCILNRYGENAQEVALKKDWICPKCRGNCNCS 93

Query: 73 TC 74
           C
Sbjct: 94 YC 95


>AT2G23530.1 | Symbols:  | Zinc-finger domain of monoamine-oxidase A
           repressor R1 | chr2:10020652-10022804 REVERSE LENGTH=552
          Length = 552

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 35/67 (52%), Gaps = 9/67 (13%)

Query: 15  ECRRKIQGVAPS----NLRNGKPCEIRFCRLCLSIRYGEEAPQVVLLDDWSCPKCRGKCN 70
           +CR+K  G        NL  G+     FC  CL +RYGE   + +   DW CP CRG CN
Sbjct: 167 QCRQKTMGHRTQCSECNLVQGQ-----FCGDCLFMRYGEHVLEALENPDWICPACRGICN 221

Query: 71  CSTCRIN 77
           CS CR N
Sbjct: 222 CSLCRNN 228