Miyakogusa Predicted Gene

Lj0g3v0357579.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0357579.1 Non Chatacterized Hit- tr|I1M6N5|I1M6N5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,97.54,0,PYRUVATE
DEHYDROGENASE E1 COMPONENT, BETA SUBUNIT,NULL; DEHYDROGENASE
RELATED,NULL; Transketolase_C,,CUFF.24794.1
         (122 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G50850.1 | Symbols: MAB1 | Transketolase family protein | chr...   210   1e-55
AT1G30120.1 | Symbols: PDH-E1 BETA | pyruvate dehydrogenase E1 b...    92   1e-19
AT2G34590.1 | Symbols:  | Transketolase family protein | chr2:14...    91   2e-19
AT1G55510.1 | Symbols: BCDH BETA1 | branched-chain alpha-keto ac...    75   8e-15
AT3G13450.1 | Symbols: DIN4 | Transketolase family protein | chr...    73   5e-14

>AT5G50850.1 | Symbols: MAB1 | Transketolase family protein |
           chr5:20689671-20692976 FORWARD LENGTH=363
          Length = 363

 Score =  210 bits (535), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 101/115 (87%), Positives = 110/115 (95%)

Query: 1   MVGYALKAAEILAKEGISAEVINLRSIRPLDRSTINTSVRKTNRLVTVEEGFPQHGVGAE 60
           MVG+ALKAAE LA+EGISAEVINLRSIRPLDR+TIN SVRKT+RLVTVEEGFPQHGV AE
Sbjct: 248 MVGFALKAAEKLAEEGISAEVINLRSIRPLDRATINASVRKTSRLVTVEEGFPQHGVCAE 307

Query: 61  ICTSVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRS 115
           IC SV+EESF YLDAPVERIAGADVPMPYAANLER+A+PQ+EDIVRA+KRACYRS
Sbjct: 308 ICASVVEESFSYLDAPVERIAGADVPMPYAANLERLALPQIEDIVRASKRACYRS 362


>AT1G30120.1 | Symbols: PDH-E1 BETA | pyruvate dehydrogenase E1 beta
           | chr1:10584350-10586477 REVERSE LENGTH=406
          Length = 406

 Score = 91.7 bits (226), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/109 (41%), Positives = 66/109 (60%)

Query: 4   YALKAAEILAKEGISAEVINLRSIRPLDRSTINTSVRKTNRLVTVEEGFPQHGVGAEICT 63
           + ++AA+ L  +G   EVI++RS++P D  TI  SV+KT+R++ VEE     G+GA +  
Sbjct: 297 HVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSVKKTHRVLIVEECMRTGGIGASLTA 356

Query: 64  SVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRAC 112
           ++ E    YLDAPV  ++  DVP PYA  LE   V Q   IV A ++ C
Sbjct: 357 AINENFHDYLDAPVMCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLC 405


>AT2G34590.1 | Symbols:  | Transketolase family protein |
           chr2:14568956-14570844 REVERSE LENGTH=406
          Length = 406

 Score = 90.9 bits (224), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/109 (41%), Positives = 66/109 (60%)

Query: 4   YALKAAEILAKEGISAEVINLRSIRPLDRSTINTSVRKTNRLVTVEEGFPQHGVGAEICT 63
           + ++AA+ L  +G   EVI++RS++P D  TI  SV+KT+R++ VEE     G+GA +  
Sbjct: 297 HVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSVKKTHRVLIVEECMRTGGIGASLTA 356

Query: 64  SVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRAC 112
           ++ E    YLDAPV  ++  DVP PYA  LE   V Q   IV A ++ C
Sbjct: 357 AINENFHDYLDAPVMCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLC 405


>AT1G55510.1 | Symbols: BCDH BETA1 | branched-chain alpha-keto acid
           decarboxylase E1 beta subunit | chr1:20723482-20725505
           FORWARD LENGTH=352
          Length = 352

 Score = 75.5 bits (184), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 2/96 (2%)

Query: 14  KEGISAEVINLRSIRPLDRSTINTSVRKTNRLVTVEEGFPQHGVGAEICTSVIEESFGYL 73
           KEGIS E+I+L+++ P D+ T+  SV+KT RL+   E     G GAEI  +++E  F  L
Sbjct: 254 KEGISCELIDLKTLLPWDKETVEASVKKTGRLLISHEAPVTGGFGAEISATILERCFLKL 313

Query: 74  DAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 109
           +APV R+ G D P P     E   +P    I+ A K
Sbjct: 314 EAPVSRVCGLDTPFPLV--FEPFYMPTKNKILDAIK 347


>AT3G13450.1 | Symbols: DIN4 | Transketolase family protein |
           chr3:4382340-4384295 REVERSE LENGTH=358
          Length = 358

 Score = 72.8 bits (177), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 2/96 (2%)

Query: 14  KEGISAEVINLRSIRPLDRSTINTSVRKTNRLVTVEEGFPQHGVGAEICTSVIEESFGYL 73
            EGIS E+I+L+++ P D+  + TSVRKT RL+   E     G GAEI  +++E  F  L
Sbjct: 260 NEGISCELIDLKTLIPWDKEIVETSVRKTGRLLISHEAPVTGGFGAEIAATIVERCFLRL 319

Query: 74  DAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 109
           +APV R+ G D P P     E   +P    I+ A +
Sbjct: 320 EAPVSRVCGLDTPFPLV--FEPFYMPTKNKILDAIR 353