Miyakogusa Predicted Gene

Lj0g3v0357479.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0357479.1 tr|G7KNJ9|G7KNJ9_MEDTR Nudix hydrolase
OS=Medicago truncatula GN=MTR_6g086510 PE=4 SV=1,84.12,0,NUDIX,NUDIX
hydrolase domain; Nudix,NUDIX hydrolase domain-like; no
description,NUDIX hydrolase doma,CUFF.24601.1
         (165 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G19460.1 | Symbols: atnudt20, NUDT20 | nudix hydrolase homolo...   255   9e-69
AT5G19470.1 | Symbols: atnudt24, NUDT24 | nudix hydrolase homolo...   243   4e-65
AT5G19470.2 | Symbols: NUDT24 | nudix hydrolase homolog 24 | chr...   226   5e-60

>AT5G19460.1 | Symbols: atnudt20, NUDT20 | nudix hydrolase homolog
           20 | chr5:6563112-6565178 FORWARD LENGTH=374
          Length = 374

 Score =  255 bits (652), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 121/165 (73%), Positives = 135/165 (81%)

Query: 1   MCGYVELDGQKHLWVAKRSHMKPTYPGMLDHLVAGGLPHGIDCRENVVKECEEEAGIPRT 60
           M GYVE DGQK LW+ KRS  K TYPGMLDHLVAGGLPHGI C  N+VKECEEEAGI R 
Sbjct: 210 MNGYVERDGQKLLWIGKRSLSKSTYPGMLDHLVAGGLPHGISCGGNLVKECEEEAGISRA 269

Query: 61  ISMKALPVGAVSYMDIDGYSYKRDVLFCYDLKLPESFVPENEDGEVDSFKLIPVKQVAEV 120
           I+ +A+ VGAVSY+DID Y +KRDVLFCYDL+LPE FVP+N+DGEV+SFKLIPV QVA V
Sbjct: 270 IADRAIAVGAVSYLDIDQYCFKRDVLFCYDLELPEDFVPKNQDGEVESFKLIPVAQVASV 329

Query: 121 IRTTQLFKPNCSLVIIDFLFRHGYISPEYHGYLDLLRSLRTGDCS 165
           I+ T  FK NCSLVIIDFLFRHG+I PE  GYLDL + LR  DCS
Sbjct: 330 IKKTSFFKANCSLVIIDFLFRHGFIRPESSGYLDLYQRLRNRDCS 374


>AT5G19470.1 | Symbols: atnudt24, NUDT24 | nudix hydrolase homolog
           24 | chr5:6566357-6568632 FORWARD LENGTH=365
          Length = 365

 Score =  243 bits (620), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 116/163 (71%), Positives = 130/163 (79%)

Query: 3   GYVELDGQKHLWVAKRSHMKPTYPGMLDHLVAGGLPHGIDCRENVVKECEEEAGIPRTIS 62
           GYVE DGQK LW+ KRS  K TYPG LDHLVAGGLPHGI   EN+VKECEEEAGI + ++
Sbjct: 203 GYVERDGQKFLWIGKRSLAKSTYPGKLDHLVAGGLPHGISVCENLVKECEEEAGISKVLA 262

Query: 63  MKALPVGAVSYMDIDGYSYKRDVLFCYDLKLPESFVPENEDGEVDSFKLIPVKQVAEVIR 122
            +A+ VG VSYMDID Y + RDVLFCYDL+LP+ FVP N+DGEVDSF+LIPV QVA V+R
Sbjct: 263 DRAIAVGVVSYMDIDRYCFTRDVLFCYDLELPQDFVPTNQDGEVDSFRLIPVAQVANVVR 322

Query: 123 TTQLFKPNCSLVIIDFLFRHGYISPEYHGYLDLLRSLRTGDCS 165
            T  FK +CSLVIIDFLFRHG I PE  GYLDL R LR GDCS
Sbjct: 323 KTSFFKDSCSLVIIDFLFRHGLIRPESPGYLDLYRRLRNGDCS 365


>AT5G19470.2 | Symbols: NUDT24 | nudix hydrolase homolog 24 |
           chr5:6566357-6568632 FORWARD LENGTH=357
          Length = 357

 Score =  226 bits (576), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 111/163 (68%), Positives = 125/163 (76%), Gaps = 8/163 (4%)

Query: 3   GYVELDGQKHLWVAKRSHMKPTYPGMLDHLVAGGLPHGIDCRENVVKECEEEAGIPRTIS 62
           GYVE DGQK LW+ KRS  K TYPG LDHLVAGGL        N+VKECEEEAGI + ++
Sbjct: 203 GYVERDGQKFLWIGKRSLAKSTYPGKLDHLVAGGL--------NLVKECEEEAGISKVLA 254

Query: 63  MKALPVGAVSYMDIDGYSYKRDVLFCYDLKLPESFVPENEDGEVDSFKLIPVKQVAEVIR 122
            +A+ VG VSYMDID Y + RDVLFCYDL+LP+ FVP N+DGEVDSF+LIPV QVA V+R
Sbjct: 255 DRAIAVGVVSYMDIDRYCFTRDVLFCYDLELPQDFVPTNQDGEVDSFRLIPVAQVANVVR 314

Query: 123 TTQLFKPNCSLVIIDFLFRHGYISPEYHGYLDLLRSLRTGDCS 165
            T  FK +CSLVIIDFLFRHG I PE  GYLDL R LR GDCS
Sbjct: 315 KTSFFKDSCSLVIIDFLFRHGLIRPESPGYLDLYRRLRNGDCS 357