Miyakogusa Predicted Gene
- Lj0g3v0356719.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0356719.1 Non Chatacterized Hit- tr|I1LUA7|I1LUA7_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,73.25,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PORR,Plant organelle RNA recognition domain; seg,NU,CUFF.24555.1
(491 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G62990.1 | Symbols: emb1692 | Ubiquitin carboxyl-terminal hyd... 414 e-115
AT4G01037.1 | Symbols: WTF1, AtWTF1 | Ubiquitin carboxyl-termina... 181 1e-45
AT5G45790.2 | Symbols: | Ubiquitin carboxyl-terminal hydrolase ... 112 7e-25
AT2G31290.2 | Symbols: | Ubiquitin carboxyl-terminal hydrolase ... 107 1e-23
AT2G31290.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase ... 107 1e-23
AT5G48040.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase ... 103 3e-22
AT5G45790.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase ... 103 3e-22
AT5G21970.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase ... 100 4e-21
AT4G33495.1 | Symbols: RPD1 | Ubiquitin carboxyl-terminal hydrol... 96 4e-20
AT3G58520.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase ... 94 1e-19
AT3G58520.2 | Symbols: | Ubiquitin carboxyl-terminal hydrolase ... 90 3e-18
AT1G71850.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase ... 88 2e-17
AT3G63090.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase ... 87 2e-17
AT1G06440.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase ... 86 6e-17
AT2G39120.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase ... 79 9e-15
AT4G08940.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase ... 77 2e-14
AT1G79120.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase ... 72 1e-12
AT4G24320.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase ... 68 2e-11
>AT5G62990.1 | Symbols: emb1692 | Ubiquitin carboxyl-terminal
hydrolase family protein | chr5:25277828-25279312
FORWARD LENGTH=494
Length = 494
Score = 414 bits (1063), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/377 (57%), Positives = 264/377 (70%), Gaps = 8/377 (2%)
Query: 17 LSSSFLPVTTPSSF---SINRKPKIHNLKNDTVSVSCSL-KTVRDGTLDRHVVMKNRIRF 72
SS FLP + P ++ K L + ++++SCS K VR +LDRHVV +NR+RF
Sbjct: 19 FSSFFLP-SIPLEIRRSNVTTKTSSKKLGSLSLNISCSAHKIVRSPSLDRHVVKQNRVRF 77
Query: 73 VQKMKTLLLSKQKHYLPLHILSKCRSYLTLSQPHSILDMIHRYPSIFELFTIPWPPTPPN 132
VQK+ TLLLSK KHY+P+ IL KCRSYL + P +IL MI RYP+IFELFT P P P N
Sbjct: 78 VQKLNTLLLSKPKHYIPIEILYKCRSYLCIENPLAILSMIRRYPTIFELFTTPTPHLPMN 137
Query: 133 ATKLNHQLCVRLTPAAASLASEEMNLQSSLSTVLATKLQKXXXXXXXXXXXXXXXXXXAP 192
ATK QLCVRLT AA+SLA +E+NL+S +S LATKLQK AP
Sbjct: 138 ATKPLSQLCVRLTSAASSLAMQELNLKSEISDKLATKLQKLLMLSSHRRLLLSKLVHIAP 197
Query: 193 DLGLPPNFRSRLCNDHPDKFKIVDTSYGRALELVSWDINLAKPLPLPSLAFQSHGLIVDR 252
D G PPNFRSRLCND+PDKFK VDTSYGRALELVS D LA +P P + GLIVDR
Sbjct: 198 DFGFPPNFRSRLCNDYPDKFKTVDTSYGRALELVSSDPELANQMPSPEV---DRGLIVDR 254
Query: 253 PLKFXXXXXXXXXXXXXXHQYFLLKFEEMPEVCPYKDRVEDVAKESIVAEKRSCAIVREV 312
PLKF HQ FL+KF E P+VCPYK + +A ESI AEKR+CA+VREV
Sbjct: 255 PLKFKRLNLRRGLNLKRRHQGFLIKFRESPDVCPYKMSSDYLASESIEAEKRACAVVREV 314
Query: 313 LGMTIEKRTLIDHLSHFRKEFGLPNKLRGMVVRHPELFYVSLKGQRDSVLLVEGFDDKGN 372
LG+T+EKRTLIDHL+HFRKEF LPNKLR ++VRHPELFYVS+KG RDSV LVE ++D G+
Sbjct: 315 LGLTVEKRTLIDHLTHFRKEFSLPNKLRDLIVRHPELFYVSIKGMRDSVFLVEAYNDNGD 374
Query: 373 LLEKDDIYVLQDKWMDL 389
LL+KD+ V++++ +DL
Sbjct: 375 LLDKDERLVIRERLIDL 391
>AT4G01037.1 | Symbols: WTF1, AtWTF1 | Ubiquitin carboxyl-terminal
hydrolase family protein | chr4:451444-453030 REVERSE
LENGTH=528
Length = 528
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 184/369 (49%), Gaps = 20/369 (5%)
Query: 48 VSCSLKTVRDGTLDRHVVMKNRIRFVQKMKTLLLSKQKHYLPLHILSKCRSYLTLSQPHS 107
V ++K ++ T D V +++ V ++ +L+S+ + L L K R L L +
Sbjct: 72 VRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRR 131
Query: 108 ILDMIHRYPSIFELFTIPWPPTPPNATKLNHQLCVRLTPAAASLASEEMNLQSSLSTVLA 167
+ ++ +YP +FE+ + + L ++T A L +EM +++ L VL
Sbjct: 132 FIALLRKYPGVFEI-----------VEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLV 180
Query: 168 TKLQKXXXXXXXXXXXXXXXXXXAPDLGLPPNFRSRLCNDHPDKFKIVDTSYGRALELVS 227
KL+K DLGLP FR +C +P F++V T G ALEL
Sbjct: 181 VKLRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTH 240
Query: 228 WDINLAKPLPLPS------LAFQSHGLIVDRPLKFXXXXXXXXXXXXXXHQYFLLKFEEM 281
WD LA S + LI+DRP KF + +F +M
Sbjct: 241 WDPELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDM 300
Query: 282 PEVCPYKDRVEDVAKESIVAEKRSCAIVREVLGMTIEKRTLIDHLSHFRKEFGLPNKLRG 341
+ PYKD + ++ EK +C ++ E+L +T EKRTL+DHL+HFR+EF +LRG
Sbjct: 301 QYISPYKD-FSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRG 359
Query: 342 MVVRHPELFYVSLKGQRDSVLLVEGFDDKGNLLEKDDIYVLQDKWMDLARESKRMRQEG- 400
M++RHP+LFYVSLKG+RDSV L E + + L++KD + ++++K L + R+ G
Sbjct: 360 MLIRHPDLFYVSLKGERDSVFLREAYRN-SELIDKDPLTLVKEKMRALVSVPRFPRRGGP 418
Query: 401 RKDRTHKDI 409
RKD +++
Sbjct: 419 RKDEEGREV 427
>AT5G45790.2 | Symbols: | Ubiquitin carboxyl-terminal hydrolase
family protein | chr5:18572345-18573664 FORWARD
LENGTH=439
Length = 439
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 186/392 (47%), Gaps = 50/392 (12%)
Query: 56 RDGTLDRHVVMKNRIRFVQKMKTLLLSKQKH-YLPLHILSKCRSYLTLSQPHSILDMIHR 114
RD LD+ + ++ + ++ L+ SK++ ++ L ++S+ ++ + L+ ++ I +
Sbjct: 70 RDHQLDKIIPQIRKLNIILEISKLMSSKKRGPFVSLQLMSRWKNLVGLNV--NVGAFIGK 127
Query: 115 YPSIFELFTIPWPPTPPNATKLNHQLCVRLTPAAASLASEEMNLQSSLSTVLATKLQKXX 174
YP FE+FT P+ + LC ++T L EE N+ +++K
Sbjct: 128 YPHAFEIFTHPF----------SKNLCCKITEKFKVLIDEEENVVRECEVDAVKRVKKLL 177
Query: 175 XXXXXXXXXXXXXXXXAPDLGLPPNFRSRLCNDHPDKFKIVDTSYGRALELVSWD---IN 231
+LGLP +FR + + +F++VD LELV D +
Sbjct: 178 LLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLE---TLELVDRDDESLC 234
Query: 232 LAKPLPLPSLAFQ---------SHGLIVDRPLKFXXXXXXXXXXXXXXHQYFLLKFEEMP 282
+AK + ++ ++ + P F L ++ +P
Sbjct: 235 VAKVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREE---------LKNWQRVP 285
Query: 283 EVCPYKDRVEDVAKESIVAEKRSCAIVREVLGMTIEKRTLIDHLSHFRKEFGLPNKLRGM 342
V PY DR E +++ EKR A++ E+L +T+EK ++ L+HFRK+ G+ +R +
Sbjct: 286 YVKPY-DRKE-ISRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVNVREV 343
Query: 343 VVRHPELFYVSLKGQRDSVLLVEGFDDKGNLLEKDDIYVLQDKWMDLA----RESKRMRQ 398
+++HP +FYVS KG ++ L E + KG L+E + IY ++ K +DL R S+ + Q
Sbjct: 344 ILKHPGIFYVSTKGSSQTLFLREAY-SKGCLIEPNPIYNVRRKMLDLVLLKTRYSRMLLQ 402
Query: 399 EGRKDRTHKDIGS---LSDTNQNSDGS-DADY 426
R+D TH++ S L +N++ +G D D+
Sbjct: 403 --REDETHREEKSRDVLISSNEDWEGGRDGDW 432
>AT2G31290.2 | Symbols: | Ubiquitin carboxyl-terminal hydrolase
family protein | chr2:13344151-13345398 FORWARD
LENGTH=415
Length = 415
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 169/389 (43%), Gaps = 40/389 (10%)
Query: 54 TVRDGTLDRHVVMKNRIRFVQKMKTLLLSKQKHYLPLHILSKCRSYLTLSQPHSILDMIH 113
T +D L+ + R ++K ++L + L K + TL L+ +
Sbjct: 28 TKKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQK--KFKTLDLQGKALNWLK 85
Query: 114 RYPSIFELFTIPWPPTPPNATKLNHQLCVRLTPAAASLASEEMNLQSSLSTVLATKLQKX 173
+YP F ++ N + RLT +L EE ++ + VLA +L K
Sbjct: 86 KYPCCFHVYLE------------NDEYYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKL 133
Query: 174 XXXXXXXXXXXXXXXXXAPDLGLPPNFRSRLCNDHPDKFKIVDTSYGR----ALELVSWD 229
G P ++ R+ + D F++V+ S GR +EL+ W
Sbjct: 134 LMLSVNQRLNVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYS-GRKSSMEIELLLWK 192
Query: 230 INLAKPLPLPSLAFQSHGLIVDRPLKFXXXXXXXXXXXXXXHQYFLLKFEEMPEVCPYKD 289
P LA + + + F+ +F P + PY+D
Sbjct: 193 ---------PELAVSAVEAAAKKCGSEPSFSCSLPSTWTKPWERFM-EFNAFPYISPYED 242
Query: 290 RVEDVAKESIVAEKRSCAIVREVLGMTIEKRTLIDHLSHFRKEFGLPNKLRGMVVRHPEL 349
D+ + S +EKRS +V E+L +T+ K+ I LSHF++EFGLP KL GM+++HP +
Sbjct: 243 H-GDLVEGSKESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGI 301
Query: 350 FYVSLKGQRDSVLLVEGFDDKGNLLEKDDIYVLQDKWMDLARE-----SKRMRQEGRKDR 404
FYV K Q +V+L EG++ L+ KD + V++DK+ +L ++ + R + +
Sbjct: 302 FYVGNKYQVHTVILREGYNG-SELIHKDPLVVVKDKFGELMQQGLYEYNHRRYLANLEKK 360
Query: 405 THKDIGSLS----DTNQNSDGSDADYDDN 429
K I SL ++N D D D ++N
Sbjct: 361 REKGIESLKPVVRKKDRNHDRDDVDEEEN 389
>AT2G31290.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase
family protein | chr2:13344151-13345398 FORWARD
LENGTH=415
Length = 415
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 169/389 (43%), Gaps = 40/389 (10%)
Query: 54 TVRDGTLDRHVVMKNRIRFVQKMKTLLLSKQKHYLPLHILSKCRSYLTLSQPHSILDMIH 113
T +D L+ + R ++K ++L + L K + TL L+ +
Sbjct: 28 TKKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQK--KFKTLDLQGKALNWLK 85
Query: 114 RYPSIFELFTIPWPPTPPNATKLNHQLCVRLTPAAASLASEEMNLQSSLSTVLATKLQKX 173
+YP F ++ N + RLT +L EE ++ + VLA +L K
Sbjct: 86 KYPCCFHVYLE------------NDEYYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKL 133
Query: 174 XXXXXXXXXXXXXXXXXAPDLGLPPNFRSRLCNDHPDKFKIVDTSYGR----ALELVSWD 229
G P ++ R+ + D F++V+ S GR +EL+ W
Sbjct: 134 LMLSVNQRLNVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYS-GRKSSMEIELLLWK 192
Query: 230 INLAKPLPLPSLAFQSHGLIVDRPLKFXXXXXXXXXXXXXXHQYFLLKFEEMPEVCPYKD 289
P LA + + + F+ +F P + PY+D
Sbjct: 193 ---------PELAVSAVEAAAKKCGSEPSFSCSLPSTWTKPWERFM-EFNAFPYISPYED 242
Query: 290 RVEDVAKESIVAEKRSCAIVREVLGMTIEKRTLIDHLSHFRKEFGLPNKLRGMVVRHPEL 349
D+ + S +EKRS +V E+L +T+ K+ I LSHF++EFGLP KL GM+++HP +
Sbjct: 243 H-GDLVEGSKESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGI 301
Query: 350 FYVSLKGQRDSVLLVEGFDDKGNLLEKDDIYVLQDKWMDLARE-----SKRMRQEGRKDR 404
FYV K Q +V+L EG++ L+ KD + V++DK+ +L ++ + R + +
Sbjct: 302 FYVGNKYQVHTVILREGYNG-SELIHKDPLVVVKDKFGELMQQGLYEYNHRRYLANLEKK 360
Query: 405 THKDIGSLS----DTNQNSDGSDADYDDN 429
K I SL ++N D D D ++N
Sbjct: 361 REKGIESLKPVVRKKDRNHDRDDVDEEEN 389
>AT5G48040.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase
family protein | chr5:19470461-19471729 FORWARD
LENGTH=422
Length = 422
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 157/355 (44%), Gaps = 18/355 (5%)
Query: 48 VSCSLKTVRDGTLDRHVVMKNRIRFVQKMKTLLLSKQKHYLPLHILSKCRSYLTLSQPHS 107
V+ LK V+D LD VV + +R V + +++ + LP+ L R L L Q
Sbjct: 33 VNVKLKWVKDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRGQLGLPQELK 92
Query: 108 ILDMIHRYPSIFELFTIPWPPTPPNATKLNHQLCVRLTPAAASLASEEMNLQSSLSTVLA 167
+ I RYP+IF + W + C LT L EE+++ +
Sbjct: 93 LSAFIRRYPNIF-VEHCYWDSAGTSVP------CFGLTRETIDLYYEEVDVSRVNERDVL 145
Query: 168 TKLQKXXXXXXXXXXXXXXXXXXAPDLGLPPNFRSRLCNDHPDKFKIVDTSYG-RALELV 226
+L K DLGLP ++R L HPD F +V S L+L+
Sbjct: 146 VRLCKLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSDLDGLKLI 205
Query: 227 SWDINLA-KPLPLPSLAFQSHGLIVDRPLKFXXXXXXXXXXXXXXHQYFLLKFEEMPEVC 285
WD +LA + L + P+KF +L +++ +P
Sbjct: 206 HWDEHLAVSQMQLREDVGNDERMAF--PVKFTRGFGLKRKSIE-----WLQEWQRLPYTS 258
Query: 286 PYKDRVEDVAKESIVAEKRSCAIVREVLGMTIEKRTLIDHLSHFRKEFGLPNKLRGMVVR 345
PY D + + ++EKR+ + E+L +TI K+T ++S+ RK F LP K + R
Sbjct: 259 PYVD-ASHLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFTKVFER 317
Query: 346 HPELFYVSLKGQRDSVLLVEGFDDKGNLLEKDDIYVLQDKWMDLARESKRMRQEG 400
HP +FY+S+K +V+L E + D+ +L+EK + +++K+ ++ E R G
Sbjct: 318 HPGIFYISMKCDTQTVILREAY-DRRHLIEKHPLVEVREKFANMMNEGFLDRSRG 371
>AT5G45790.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase
family protein | chr5:18572473-18573664 FORWARD
LENGTH=354
Length = 354
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 156/336 (46%), Gaps = 47/336 (13%)
Query: 111 MIHRYPSIFELFTIPWPPTPPNATKLNHQLCVRLTPAAASLASEEMNLQSSLSTVLATKL 170
I +YP FE+FT P+ + LC ++T L EE N+ ++
Sbjct: 39 FIGKYPHAFEIFTHPF----------SKNLCCKITEKFKVLIDEEENVVRECEVDAVKRV 88
Query: 171 QKXXXXXXXXXXXXXXXXXXAPDLGLPPNFRSRLCNDHPDKFKIVDTSYGRALELVSWD- 229
+K +LGLP +FR + + +F++VD LELV D
Sbjct: 89 KKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLE---TLELVDRDD 145
Query: 230 --INLAKPLPLPSLAFQ---------SHGLIVDRPLKFXXXXXXXXXXXXXXHQYFLLKF 278
+ +AK + ++ ++ + P F L +
Sbjct: 146 ESLCVAKVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREE---------LKNW 196
Query: 279 EEMPEVCPYKDRVEDVAKESIVAEKRSCAIVREVLGMTIEKRTLIDHLSHFRKEFGLPNK 338
+ +P V PY DR +++++ EKR A++ E+L +T+EK ++ L+HFRK+ G+
Sbjct: 197 QRVPYVKPY-DR-KEISRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVN 254
Query: 339 LRGMVVRHPELFYVSLKGQRDSVLLVEGFDDKGNLLEKDDIYVLQDKWMDLA----RESK 394
+R ++++HP +FYVS KG ++ L E + KG L+E + IY ++ K +DL R S+
Sbjct: 255 VREVILKHPGIFYVSTKGSSQTLFLREAY-SKGCLIEPNPIYNVRRKMLDLVLLKTRYSR 313
Query: 395 RMRQEGRKDRTHKDIGS---LSDTNQNSDGS-DADY 426
+ Q R+D TH++ S L +N++ +G D D+
Sbjct: 314 MLLQ--REDETHREEKSRDVLISSNEDWEGGRDGDW 347
>AT5G21970.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase
family protein | chr5:7262071-7263420 FORWARD LENGTH=449
Length = 449
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 138/331 (41%), Gaps = 36/331 (10%)
Query: 93 LSKCRSYLTLSQPHSILDMIHRYPSIFELFTIPWPPTPPNATKLNHQLCVRLTPAAASLA 152
+ R + L +PH I D I + P +FEL+ L LT L
Sbjct: 94 FEQYRRQINLPKPHKISDFIRKSPKLFELYK-----------DQRGVLWCGLTEGGEDLL 142
Query: 153 SEEMNLQSSLSTVLATKLQKXXXXXXXXXXXXXXXXXXAPDLGLPPNFRSRLCNDHPDKF 212
E L A + + D GLP +FR + P F
Sbjct: 143 DEHDKLLEENGDKAAEHVTRCLMMSVDKKLPLDKIVHFRRDFGLPLDFRINWVYNFPQHF 202
Query: 213 KIVDTSYGRA-LELVSWDINLA------KPLPLPSLAFQSHGLI-VDRPLKFXXXXXXXX 264
K+V G LELVSW+ A K L + G++ + P+KF
Sbjct: 203 KVVKLGDGEEYLELVSWNPAWAITELEKKTLGITEDCEHKPGMLSLAFPMKFPPSYKKMY 262
Query: 265 XXXXXXHQYFLLKFEEMPEVCPYKDRVEDVAKESIVAEKRSCAIVREVLGMTIEKRTLID 324
F++ + PY D + S +KR+ A++ E+L T+EKR + D
Sbjct: 263 RYRGKIEH-----FQKRSYLSPYAD-ARGLEAGSKEFDKRAIAVMHELLSFTLEKRLVTD 316
Query: 325 HLSHFRKEFGLPNKLRGMVVRHPELFYVSLKGQRDSVLLVEGFDDKGNLLEKDDIYVLQD 384
HL+HFR+EF +P KL + ++H +FYVS +G+R SV L EG++ L+EK + + ++
Sbjct: 317 HLTHFRREFVMPQKLMRIFLKHCGIFYVSERGKRFSVFLTEGYEGP-ELIEKCPLILWKE 375
Query: 385 KWMDLARESKRMRQEGRKDRTHKDIGSLSDT 415
K + GRK +DI + SDT
Sbjct: 376 KLLKFT------GYRGRK----RDIQTYSDT 396
>AT4G33495.1 | Symbols: RPD1 | Ubiquitin carboxyl-terminal hydrolase
family protein | chr4:16111349-16112578 REVERSE
LENGTH=409
Length = 409
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 163/365 (44%), Gaps = 48/365 (13%)
Query: 55 VRDGTLDRHVVMKNRIRFVQKMKTLLLSKQKHYLPLHILSKCRSYLTLS-QPHSILDMIH 113
VRD D ++ ++ +IR V K +L+LS+ H + + +L L L + H +
Sbjct: 47 VRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLL 106
Query: 114 RYPSIFELFTIPWPPTPPNATKLNHQLCVRLTPAAASLASEEMNLQSSLSTVLATKLQKX 173
++P +FE++ P + L RLT A E T+L+K
Sbjct: 107 KFPHVFEIYEHP----------VQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKL 156
Query: 174 XXXXXXXXXXXXXXXXXAPDLGLPPNFRSRLCNDHPDKFKIVDTSYGR--ALELVSWDIN 231
+ GLP +F + HP F+++D R +E+V D N
Sbjct: 157 VMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPN 216
Query: 232 LA--KPLPLPSLAFQSHGL---------IVDRPLKFXXXXXXXXXXXXXXHQYFLL---K 277
L+ + + +++ G+ +V+ P F +YF + K
Sbjct: 217 LSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIG------------KYFRIAVWK 264
Query: 278 FEEMPEVCPYKDRVEDVAKESIVA----EKRSCAIVREVLGMTIEKRTLIDHLSHFRKEF 333
++ +P PY+D + S+ A EKRS A + E+L +T+EK+ ++ ++HFR
Sbjct: 265 WQRLPYWSPYED-ISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVM 323
Query: 334 GLPNKLRGMVVRHPELFYVSLK---GQRDSVLLVEGFDDKGNLLEKDDIYVLQDKWMDLA 390
LP KL+ +++H +FY+S + G+ +V L EG+ +G L+E +D+Y+ + + +L
Sbjct: 324 NLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGY-KRGELVEPNDVYLARRRLAELV 382
Query: 391 RESKR 395
S R
Sbjct: 383 LMSPR 387
>AT3G58520.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase
family protein | chr3:21643921-21645277 REVERSE
LENGTH=418
Length = 418
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 157/367 (42%), Gaps = 40/367 (10%)
Query: 52 LKTVRDGTLDRHVVMKNRIRFVQKMKTLLLSKQKHYLPLHILSKCRSYLTLSQPHSILDM 111
LK V++ LD + + ++ +K + +L ++ + L L+ P +L
Sbjct: 33 LKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGFLTAKSVADWQKLLGLTVP--VLRF 90
Query: 112 IHRYPSIFELFTIPWPPTPPNATKLNHQLCVRLTPAAASLASEEMNLQSSLSTVLATKLQ 171
+ RYP++F F P+A + C +LT A L S+E + S +L
Sbjct: 91 LRRYPTLFHEF--------PHA-RYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLC 141
Query: 172 KXXXXXXXXXXXXXXXXXXAPDLGLPPNFRSRLCNDHPDKFKIVDTSYGR-ALELVSWDI 230
+ DLGLP N+ L +PD F V S G L+LV W
Sbjct: 142 RVLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNPCLKLVKWRD 201
Query: 231 NLAKPLPLPSLA-----------------FQSHGLIVDRPLKFXXXXXXXXXXXXXXHQY 273
A +L F+ + P+ F +
Sbjct: 202 EFA----FSALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQKKV-----KA 252
Query: 274 FLLKFEEMPEVCPYKDRVEDVAKESIVAEKRSCAIVREVLGMTIEKRTLIDHLSHFRKEF 333
++ +F+++P + PY D ++ ES + EKR+ A++ E+L +TI K+T ++L R E
Sbjct: 253 WMDEFQKLPYISPYDD-PSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSMRAEL 311
Query: 334 GLPNKLRGMVVRHPELFYVSLKGQRDSVLLVEGFDDKGNLLEKDDIYVLQDKWMDLARES 393
+P+K + R+P +FY+SLK + +V+L EG+ +G L++ + L+DK+ + R
Sbjct: 312 NIPHKFTRLFTRYPGIFYLSLKCKTTTVILKEGY-RRGKLVDPHPLTRLRDKFYHVMRTG 370
Query: 394 KRMRQEG 400
R G
Sbjct: 371 FLYRARG 377
>AT3G58520.2 | Symbols: | Ubiquitin carboxyl-terminal hydrolase
family protein | chr3:21643921-21645277 REVERSE
LENGTH=406
Length = 406
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 129/305 (42%), Gaps = 38/305 (12%)
Query: 114 RYPSIFELFTIPWPPTPPNATKLNHQLCVRLTPAAASLASEEMNLQSSLSTVLATKLQKX 173
RYP++F F + P C +LT A L S+E + S +L +
Sbjct: 81 RYPTLFHEFPHARYASLP---------CFKLTDTALMLDSQEEIIHQSHEADTVERLCRV 131
Query: 174 XXXXXXXXXXXXXXXXXAPDLGLPPNFRSRLCNDHPDKFKIVDTSYGR-ALELVSWDINL 232
DLGLP N+ L +PD F V S G L+LV W
Sbjct: 132 LMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNPCLKLVKWRDEF 191
Query: 233 AKPLPLPSLA-----------------FQSHGLIVDRPLKFXXXXXXXXXXXXXXHQYFL 275
A +L F+ + P+ F + ++
Sbjct: 192 A----FSALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQKKV-----KAWM 242
Query: 276 LKFEEMPEVCPYKDRVEDVAKESIVAEKRSCAIVREVLGMTIEKRTLIDHLSHFRKEFGL 335
+F+++P + PY D ++ ES + EKR+ A++ E+L +TI K+T ++L R E +
Sbjct: 243 DEFQKLPYISPYDD-PSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNI 301
Query: 336 PNKLRGMVVRHPELFYVSLKGQRDSVLLVEGFDDKGNLLEKDDIYVLQDKWMDLARESKR 395
P+K + R+P +FY+SLK + +V+L EG+ +G L++ + L+DK+ + R
Sbjct: 302 PHKFTRLFTRYPGIFYLSLKCKTTTVILKEGY-RRGKLVDPHPLTRLRDKFYHVMRTGFL 360
Query: 396 MRQEG 400
R G
Sbjct: 361 YRARG 365
>AT1G71850.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase
family protein | chr1:27024875-27026287 REVERSE
LENGTH=470
Length = 470
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 190/418 (45%), Gaps = 36/418 (8%)
Query: 29 SFSINRKPKIHNLKNDTVSVSCSLKTVRDGTLDRHVVMKNRIRFVQKMKTLLLSKQKHYL 88
S SI R H DT +V + K VRD LD V + +R + +K L+ S+ +
Sbjct: 7 SISIRRHSG-HRTFADTSAVEDTYKFVRDRGLDHAVEREKNLRPLLSIKDLIRSEPAKSV 65
Query: 89 PLHILSKCRSYLTLSQPHSILDMIHRYPSIFELFTIPWPPTPPNATKLNHQLCVRLTPAA 148
P+ +++ + L + P ++ I +PS+F+ F P ++ + LTP
Sbjct: 66 PISVITSQKDSLRV--PLRPIEFIRSFPSVFQEFL-------PGGIGIHPHIS--LTPEI 114
Query: 149 ASLASEEMNLQSS--LSTVLATKLQKXXXXXXXXXXXXXXXXXXAPDLGLPPNFRSRLCN 206
+ ++E + S LA +L K DLGLP ++ +
Sbjct: 115 LNHDADEQLVYGSETYKQGLADRLLKLLMINRINKIPLEILDLLKWDLGLPKDYVETMVP 174
Query: 207 DHPDKFKIVDTSY---GRALELVSWDIN-----LAKPLPLPSLAFQSHGLIVDRPLKFXX 258
+ PD F+++ + LELV W L K + G + P+KF
Sbjct: 175 EFPDYFRVIKSKLRGCSGELELVCWSNEHAVSVLEKKARTLRKGEYTKGSAIAFPMKFSN 234
Query: 259 XXXXXXXXXXXXHQYFLLKFEEMPEVCPYKDRVEDVAKESIVAEKRSCAIVREVLGMTIE 318
+ ++ ++++P + PY++ + ++ S ++K + A++ E++ + +
Sbjct: 235 GFVVDKKM-----KKWIDDWQKLPYISPYENALH-LSATSDESDKWAAAVLHEIMNLFVS 288
Query: 319 KRTLIDHLSHFRKEFGLPNKLRGMVVRHPELFYVSLKGQRDSVLLVEGFDDKGNLLEKDD 378
K+ D + H + GL ++ + ++ HP +FY+S K + +V+L +G+ +G L+E ++
Sbjct: 289 KKVEKDAILHLGEFMGLRSRFKRVLHNHPGIFYLSSKLRTHTVVLRDGY-KRGMLIESNE 347
Query: 379 IYVLQDKWMDL----ARESKRMRQEGRKDRTHKDIGSLSDTN---QNSDGSDADYDDN 429
+ ++++M L +++K + +K+ K G + DT+ +N D S +D +D+
Sbjct: 348 LVTSRNRYMKLMNTVKKDNKAVSSSSKKEDKGKVEGEVCDTDAKAENDDISGSDVEDD 405
>AT3G63090.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase
family protein | chr3:23313617-23314831 FORWARD
LENGTH=404
Length = 404
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 161/369 (43%), Gaps = 41/369 (11%)
Query: 51 SLKTV--RDGTLDRHVVMKNRIRFVQKMKTLLLSKQKHYLPLHILSKCRSYLTLS-QPHS 107
SLK V +D LD + R + ++ +L++ +PL L K R L L+ + S
Sbjct: 33 SLKVVWKKDTRLDEAIEQDKRYKLCARVVKEVLNEPGQVIPLRYLEKRRERLRLTFKAKS 92
Query: 108 ILDMIHRYPSIFELFTIPWPPTPPNATKLNHQLCVRLTPAAASLASEEMNLQSSLSTVLA 167
++M PS+FE++ + P + + +R TP + EE + S +L
Sbjct: 93 FVEM---NPSLFEIY---YDRIKPKSDPVQF---LRPTPRLRAFLDEEQRIYSENEPLLV 143
Query: 168 TKLQKXXXXXXXXXXXXXXXXXXAPDLGLPPNFRSRLCNDHPDKFKIVDT-SYGRA-LEL 225
+KL + D G P +F +L +P+ F++ G++ LEL
Sbjct: 144 SKLCQLLMMAKDKVISADKLVHVKRDFGFPNDFLMKLVQKYPNYFRLTGLPEEGKSFLEL 203
Query: 226 VSWDINLAKPLPLPSLAFQSHGLIVDRPLKFXXXXXXXXXXXXXXHQYFLLKFEEMPE-- 283
VSW+ + AK + ++ D LK +FL K EM E
Sbjct: 204 VSWNPDFAKS----KIELRAE----DETLK-TGVRIRPNYNVKLPSGFFLRK--EMREWT 252
Query: 284 --------VCPYKDRVEDVAKESIVAEKRSCAIVREVLGMTIEKRTLIDHLSHFRKEFGL 335
+ PY+D V + + S EKR+ +V E+L +++ KR + L F EF
Sbjct: 253 RDWLEQDYISPYED-VSHLDQASKEMEKRTVGVVHELLSLSLLKRVPVPTLGKFCDEFRF 311
Query: 336 PNKLRGMVVRHPELFYVSLKGQRDSVLLVEGFDDKGNLLEKDDIYVLQDKWMDLARESKR 395
N + RH +FY+SLKG + +L E + D L+++D + ++DK++ L E
Sbjct: 312 SNAFSSVFTRHSGIFYLSLKGGIKTAVLREAYKD-DELVDRDPLLAIKDKFLRLLEEG-- 368
Query: 396 MRQEGRKDR 404
+ RKDR
Sbjct: 369 --WQERKDR 375
>AT1G06440.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase
family protein | chr1:1963733-1964905 REVERSE LENGTH=390
Length = 390
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 141/318 (44%), Gaps = 33/318 (10%)
Query: 88 LPLHILSKCRSYLTLSQPHSILDMIHRYPSIFELFTIPWPPTPPNATKLNHQLCVRLTPA 147
L + LS+ L L++ + + +YP IF + P P C RLT
Sbjct: 71 LSIEFLSRLSQKLHLNRGAA--SFLRKYPHIFHVLYDPVKAEP---------FC-RLTDV 118
Query: 148 AASLASEEMNLQSSLSTVLATKLQKXXXXXXXXXXXXXXXXXXAPDLGLPPNFRSRLCND 207
A ++ +E ++ +++ +L + +LGLP +F + +
Sbjct: 119 AMEISRQEALAITATLSLVVDRLVRLLSMSISKSIPLRAVFKVWRELGLPDDFEDSVISK 178
Query: 208 HPDKFKIVD--TSYGRALELVSWDINLAKPLPLPSLAFQSHGLI--------VDRPLKFX 257
+P FK+ D S LELV + K L + A + ++ VDR +
Sbjct: 179 NPHLFKLSDGHESNTHILELVQEE---EKRLEFEA-AVEKWRVVECSKEDCSVDRT-EIQ 233
Query: 258 XXXXXXXXXXXXXHQYFLLKFEE---MPEVCPYKDRVEDVAKESIVA--EKRSCAIVREV 312
+ F K +E +P V PY+D V S V EKR+ AI E
Sbjct: 234 FSFKHSYPPGMRLSKTFKAKVKEWQRLPYVGPYEDMVGKKKSRSGVMGIEKRAVAIAHEF 293
Query: 313 LGMTIEKRTLIDHLSHFRKEFGLPNKLRGMVVRHPELFYVSLKGQRDSVLLVEGFDDKGN 372
L +T+EK ++ +SHFRK FG+ +R + + HP +FYVS KG+R +V L E + ++G
Sbjct: 294 LNLTVEKMVEVEKISHFRKCFGIDLNIRDLFLDHPGMFYVSTKGKRHTVFLREAY-ERGR 352
Query: 373 LLEKDDIYVLQDKWMDLA 390
L++ + +Y + K +DL
Sbjct: 353 LIDPNPVYDARRKLLDLV 370
>AT2G39120.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase
family protein | chr2:16321794-16322957 FORWARD
LENGTH=387
Length = 387
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 154/374 (41%), Gaps = 18/374 (4%)
Query: 40 NLKNDTVSVSCSLKTVRDGTLD--RHVVMKNRIRFVQKMKTLLLSKQKHYLPLHILSKCR 97
NL V +K RD D H++ ++++ V +K ++ + +P+ +SK
Sbjct: 17 NLTQKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKT 76
Query: 98 SYLTLSQPHSILDMIHRYPSIFELFTIPWPPTPPNATKLNHQLCVRLTPAAASLASEEMN 157
+S I + ++PSIFE F P P RLTP A L +E
Sbjct: 77 RQFDVST--KIAHFLRKFPSIFEEFVGPEYNLP----------WFRLTPEATELDRQERV 124
Query: 158 LQSSLSTVLATKLQKXXXXXXXXXXXXXXXXXXAPDLGLPPNFRSRLCNDHPDKFKIVDT 217
+ + + L +L+K LGLP ++ + F+ VD
Sbjct: 125 VYQTSADDLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDM 184
Query: 218 SYGRALELVSWDINLAKPLPLPSLAFQSH-GLIVDRPLKFXXXXXXXXXXXXXXHQYFLL 276
G V ++ L A + G + ++F + L+
Sbjct: 185 EDGVKGLAVDYNGGDKVLSVLQKNAMKKRRGEVSLEEIEFPLFPSKGCRLRVKIEDW-LM 243
Query: 277 KFEEMPEVCPYKDRVEDVAKESIVAEKRSCAIVREVLGMTIEKRTLIDHLSHFRKEFGLP 336
+F+++P V PY D + S +AEKR + E+L + +E L +K FGLP
Sbjct: 244 EFQKLPYVSPYDD-YSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLP 302
Query: 337 NKLRGMVVRHPELFYVSLKGQRDSVLLVEGFDDKGNLLEKDDIYVLQDKWMDLARESKRM 396
K+ RHP++FY+S+K + + +L E + DK + +E + ++ K++ L + S+ +
Sbjct: 303 QKVHKAFERHPQIFYLSMKNKTCTAILREPYRDKAS-VETHPVLGVRKKYIQLMKNSELI 361
Query: 397 RQEGRKDRTHKDIG 410
+ R +D G
Sbjct: 362 LKSRRNSFGFRDEG 375
>AT4G08940.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase
family protein | chr4:5730986-5732173 REVERSE LENGTH=395
Length = 395
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
Query: 194 LGLPPNFRSRLCNDHPDKFKIVDTSYG-RALELVSWDINLAKPLPLPSLAFQSHGLIVDR 252
G+P +FR R+ +PD F++V G R LELV+WD NLA L L F R
Sbjct: 194 FGIPEDFRDRVAK-YPDYFRVVTGGDGNRVLELVNWDTNLAVS-ELERL-FMIDEDKAKR 250
Query: 253 PLKFXXXXXXXXXXXXXXHQYFLLKFEEMPEVCPYKDRVE-DVAKESIVAEKRSCAIVRE 311
KF + L P V PY D + DV S+ AEK IV E
Sbjct: 251 VFKFPVKHGKELELEEKDTRKLNL-LNTFPLVSPYSDGWKLDVW--SLEAEKYRVGIVHE 307
Query: 312 VLGMTIEKRTLIDHLSHFRKEFGLPNKLRGMVVRHPELFYVSLKGQRDSVLLVEGFDDKG 371
L +T+EKR I H+ F+ EF L + M+ + FY++ +V L + +D+ G
Sbjct: 308 FLNLTLEKRASIHHIVEFKDEFSLTRQTYQMLKKQSMSFYLAGTEMNWTVFLKDAYDENG 367
Query: 372 NLLEKDDIYVLQDKWMDLARESKRMRQEG 400
L+ KD V +K A + ++M Q G
Sbjct: 368 VLVSKDPQVVFNEKLYKYA-DMQQMEQVG 395
>AT1G79120.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase
family protein | chr1:29767314-29768555 REVERSE
LENGTH=413
Length = 413
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 143/344 (41%), Gaps = 31/344 (9%)
Query: 60 LDRHVVMKNRIRFVQKMKTLLLSKQKHYLPLHILSKCRSYLTLSQPHSILDMIHRYPSIF 119
LD+ + + + + ++K+++ +++ L L L K ++ +++ I +YP+IF
Sbjct: 68 LDKAIDLNKKPSLILQLKSIIQAQKHGSLLLRDLEK---HVGFVHKWNLMAAIEKYPTIF 124
Query: 120 ELFTIPWPPTPPNATKLNHQLCVRLTPAAASLASEEMNLQSSLSTVLATKLQKXXXXXXX 179
+ PP V LT A +A+EE S+ +L L+K
Sbjct: 125 --YVGGGHKEPP---------FVMLTEKAKKIAAEESEATESMEPILVNNLRKLLMMSVD 173
Query: 180 XXXXXXXXXXXAPDLGLPPNFRSRLCNDHPDKFKIVDTSYGRALELVSWDINLAKPLPLP 239
+GLP +F+S L + + F + + L L +WD +LA
Sbjct: 174 CRVPLEKVEFIQSAMGLPQDFKSTLIPKYTEFFSLKVINGKVNLVLENWDSSLAITARED 233
Query: 240 SLAFQSHGLIVDRPLKFXXXXXXXXXXXXXXHQYF-------------LLKFEEMPEVCP 286
L+ + V + F K+++M P
Sbjct: 234 RLSREGFSESVGDRKRVRITKDGNFLGRNAFKISFPPGFRPNASYLEEFEKWQKMEFPSP 293
Query: 287 YKD-RVEDVAKESIVAEKRSCAIVREVLGMTIEKRTLIDHLSHFRKEFGLPNKLRGMVVR 345
Y + R D A A KR A++ E+L +T+EKR L F E+ LP++L +++
Sbjct: 294 YLNARRFDAADPK--ARKRVVAVLHELLSLTMEKRVTCAQLDAFHSEYLLPSRLILCLIK 351
Query: 346 HPELFYVSLKGQRDSVLLVEGFDDKGNLLEKDDIYVLQDKWMDL 389
H +FY++ KG R +V L + + NL+EK + + D+++ L
Sbjct: 352 HQGIFYITNKGARGTVFLKDAYAG-SNLIEKCPLLLFHDRFVAL 394
>AT4G24320.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase
family protein | chr4:12602298-12603485 REVERSE
LENGTH=395
Length = 395
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 134/313 (42%), Gaps = 41/313 (13%)
Query: 111 MIHRYPSIFELFTIPWPPTPPNATKLNHQLCVRLTPAAASLASEE--MNLQSSLSTVLAT 168
+YPS+F F P+P +H L VRLTP A +L EE ++L V
Sbjct: 80 FFQKYPSVFTTFQ----PSP------SHPLHVRLTPQALTLHKEEETIHLSPPQRNVTVQ 129
Query: 169 KLQKXXXXXXXXXXXXXXXXXXAPDLGLPPNFRSRLCNDHPDKFKIV---DTSYGR---A 222
+L K DLGLP ++ + L D+P+ F++ D G A
Sbjct: 130 RLTKFLMLTGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKDRLTGEKTLA 189
Query: 223 LELVSWDINLAKPLPLPSLAFQS---------HGLIVDRPLKFXXXXXXXXXXXXXXHQY 273
L + S N LP+ + + GL + + F Q+
Sbjct: 190 LTISSRRNN----LPVSEMERREATIDGSRVKKGLRIRYSMNFPKGYELHKRVKNWVEQW 245
Query: 274 FLLKFEEMPEVCPYKDRVEDVAKESIVAEKRSCAIVREVLGMTIEKRTLIDHLSHFRKEF 333
+ +P + PY++ + S AEK + A++ E+L + + K+T D++ +
Sbjct: 246 -----QNLPYISPYENAFH-LGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGEYL 299
Query: 334 GLPNKLRGMVVRHPELFYVSLKGQRDSVLLVEGFDDKGNLLEKDDIYVLQDKWMDLARES 393
G + + +V HP +FY+S K + +V+L E + K LLEK + ++ +++ L +S
Sbjct: 300 GFGMRFKKALVHHPGIFYMSHKIRTQTVVLREAY-HKVFLLEKHPLMGIRHQYIYLMSKS 358
Query: 394 KRMRQEGRKDRTH 406
R + ++D H
Sbjct: 359 GRGK---KRDYVH 368