Miyakogusa Predicted Gene

Lj0g3v0355929.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0355929.1 tr|I3T386|I3T386_LOTJA 60S ribosomal protein L18a
OS=Lotus japonicus PE=2 SV=1,100,0,Ribosomal_L18ae,Ribosomal protein
L18a/LX; 60S RIBOSOMAL PROTEIN L18A,NULL; 60S RIBOSOMAL PROTEIN
L1,NODE_49588_length_757_cov_102.610306.path1.1
         (178 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G34480.1 | Symbols:  | Ribosomal protein L18ae/LX family prot...   339   7e-94
AT3G14600.1 | Symbols:  | Ribosomal protein L18ae/LX family prot...   329   5e-91
AT1G29965.1 | Symbols:  | Ribosomal protein L18ae/LX family prot...   323   4e-89
AT1G29970.2 | Symbols: RPL18AA | 60S ribosomal protein L18A-1 | ...   320   5e-88

>AT2G34480.1 | Symbols:  | Ribosomal protein L18ae/LX family protein
           | chr2:14532916-14534161 REVERSE LENGTH=178
          Length = 178

 Score =  339 bits (869), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 160/178 (89%), Positives = 170/178 (95%)

Query: 1   MVAFKFHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           M AF+FHQYQVVGRALPTE DV PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMYNEMASRHRVRS 120
           LAINEI+EKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVE MY EMASRHRVR 
Sbjct: 61  LAINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVEAKLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKASRPNLFM 178
           PCIQIIKTATV AKLCKRESTKQFHNSKIKFPLV++K+RPP+RKLKTTYKA++PNLFM
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178


>AT3G14600.1 | Symbols:  | Ribosomal protein L18ae/LX family protein
           | chr3:4910773-4911933 FORWARD LENGTH=178
          Length = 178

 Score =  329 bits (844), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 156/178 (87%), Positives = 164/178 (92%)

Query: 1   MVAFKFHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           M  F+FHQYQVVGRALPTE D HPKIYRMKLW  NEV AKSKFWYF+RKLKKVKKSNGQ+
Sbjct: 1   MGGFRFHQYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMYNEMASRHRVRS 120
           LAINEIFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VE MY EMASRHRVR 
Sbjct: 61  LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVEAKLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKASRPNLFM 178
           PCIQIIKTATV AKLCKRE TKQFHNSKIKFPLV++K+RPP+RKLKTTYKAS+PNLFM
Sbjct: 121 PCIQIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM 178


>AT1G29965.1 | Symbols:  | Ribosomal protein L18ae/LX family protein
           | chr1:10498458-10499373 REVERSE LENGTH=178
          Length = 178

 Score =  323 bits (827), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 152/178 (85%), Positives = 163/178 (91%)

Query: 1   MVAFKFHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           M   + HQYQVVGRALPTE D  PKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQ+
Sbjct: 1   MSVIRLHQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMYNEMASRHRVRS 120
           LAINEIFEKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVE MY EMASRHRVR 
Sbjct: 61  LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVEAKLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKASRPNLFM 178
           PCIQIIKTATV A LCKRESTKQFHNSKIKFPLV++K+RPPTRKLKTT+KA++PNLFM
Sbjct: 121 PCIQIIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM 178


>AT1G29970.2 | Symbols: RPL18AA | 60S ribosomal protein L18A-1 |
           chr1:10498458-10501311 REVERSE LENGTH=312
          Length = 312

 Score =  320 bits (819), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 151/177 (85%), Positives = 162/177 (91%)

Query: 2   VAFKFHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVL 61
            +   HQYQVVGRALPTE D  PKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQ+L
Sbjct: 136 CSIALHQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQML 195

Query: 62  AINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMYNEMASRHRVRSP 121
           AINEIFEKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVE MY EMASRHRVR P
Sbjct: 196 AINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFP 255

Query: 122 CIQIIKTATVEAKLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKASRPNLFM 178
           CIQIIKTATV A LCKRESTKQFHNSKIKFPLV++K+RPPTRKLKTT+KA++PNLFM
Sbjct: 256 CIQIIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM 312