Miyakogusa Predicted Gene

Lj0g3v0354089.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0354089.1 tr|G7KD70|G7KD70_MEDTR Yellow stripe-like protein
2.8 OS=Medicago truncatula GN=MTR_5g091600 PE=4
SV,84.81,9e-31,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
OPT,Oligopeptide transporter OPT superfamily; seg,N,CUFF.24375.1
         (79 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G65730.1 | Symbols: YSL7 | YELLOW STRIPE like 7 | chr1:244426...    97   2e-21
AT1G48370.1 | Symbols: YSL8 | YELLOW STRIPE like 8 | chr1:178745...    83   5e-17
AT3G17650.1 | Symbols: YSL5, PDE321 | YELLOW STRIPE like 5 | chr...    80   2e-16
AT5G24380.1 | Symbols: YSL2, ATYSL2 | YELLOW STRIPE like 2 | chr...    71   2e-13
AT5G53550.2 | Symbols: YSL3 | YELLOW STRIPE like 3 | chr5:217560...    69   5e-13
AT5G53550.1 | Symbols: YSL3, ATYSL3 | YELLOW STRIPE like 3 | chr...    69   5e-13
AT3G27020.1 | Symbols: YSL6 | YELLOW STRIPE like 6 | chr3:996162...    69   6e-13
AT5G41000.1 | Symbols: YSL4 | YELLOW STRIPE like 4 | chr5:164209...    65   1e-11
AT4G24120.1 | Symbols: YSL1, ATYSL1 | YELLOW STRIPE like 1 | chr...    65   1e-11

>AT1G65730.1 | Symbols: YSL7 | YELLOW STRIPE like 7 |
           chr1:24442639-24446122 FORWARD LENGTH=688
          Length = 688

 Score = 97.1 bits (240), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/79 (60%), Positives = 56/79 (70%)

Query: 1   MSPEIAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGT 60
           MS  +AKQS+EANT +++K P LGWM+                 RKIMIVDFKLTYPSGT
Sbjct: 136 MSDVVAKQSAEANTPLNIKNPHLGWMIGFLFVVSFLGLFSVVPLRKIMIVDFKLTYPSGT 195

Query: 61  ATAHLINSFHTTEGARLAK 79
           ATAHLINSFHT +GA+LAK
Sbjct: 196 ATAHLINSFHTPQGAKLAK 214


>AT1G48370.1 | Symbols: YSL8 | YELLOW STRIPE like 8 |
           chr1:17874560-17877256 FORWARD LENGTH=724
          Length = 724

 Score = 82.8 bits (203), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/79 (55%), Positives = 50/79 (63%), Gaps = 2/79 (2%)

Query: 1   MSPEIAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGT 60
           MS  IA QS   + A  +K P LGWM+A                RKIMI+DFKL YPSGT
Sbjct: 164 MSHRIADQS--GDVARGVKDPSLGWMIAFLFVVSFLGLFSVVPLRKIMIIDFKLPYPSGT 221

Query: 61  ATAHLINSFHTTEGARLAK 79
           ATAHLINSFHT +GA+LAK
Sbjct: 222 ATAHLINSFHTPQGAKLAK 240


>AT3G17650.1 | Symbols: YSL5, PDE321 | YELLOW STRIPE like 5 |
           chr3:6034307-6037087 FORWARD LENGTH=714
          Length = 714

 Score = 80.5 bits (197), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/79 (51%), Positives = 50/79 (63%), Gaps = 2/79 (2%)

Query: 1   MSPEIAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGT 60
           MS  IA QS + +  +  K P LGW++                 RKIM++DFKLTYPSGT
Sbjct: 155 MSERIATQSGDVSRGV--KDPSLGWIIGFLFVVSFLGLFSVVPLRKIMVIDFKLTYPSGT 212

Query: 61  ATAHLINSFHTTEGARLAK 79
           ATAHLINSFHT +GA+LAK
Sbjct: 213 ATAHLINSFHTPQGAKLAK 231


>AT5G24380.1 | Symbols: YSL2, ATYSL2 | YELLOW STRIPE like 2 |
           chr5:8324098-8326525 FORWARD LENGTH=664
          Length = 664

 Score = 70.9 bits (172), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/71 (46%), Positives = 44/71 (61%)

Query: 9   SSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGTATAHLINS 68
           ++E N    +K PG+GWM +                RK+MI+D+KLTYPSGTATA LIN 
Sbjct: 134 NTEGNNPRGIKEPGVGWMTSFLFVTSFIGLVVLVPLRKVMIIDYKLTYPSGTATAVLING 193

Query: 69  FHTTEGARLAK 79
           FHT++G + AK
Sbjct: 194 FHTSKGDKTAK 204


>AT5G53550.2 | Symbols: YSL3 | YELLOW STRIPE like 3 |
           chr5:21756081-21758776 FORWARD LENGTH=675
          Length = 675

 Score = 69.3 bits (168), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/70 (48%), Positives = 42/70 (60%)

Query: 10  SEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGTATAHLINSF 69
           ++ N     K PG+GWM A                RKIMI+D+KLTYPSGTATA LIN F
Sbjct: 147 TDGNYPEGTKEPGIGWMTAFLFFTCFVGLLALVPLRKIMIIDYKLTYPSGTATAVLINGF 206

Query: 70  HTTEGARLAK 79
           HT +G ++AK
Sbjct: 207 HTPKGNKMAK 216


>AT5G53550.1 | Symbols: YSL3, ATYSL3 | YELLOW STRIPE like 3 |
           chr5:21756081-21758776 FORWARD LENGTH=675
          Length = 675

 Score = 69.3 bits (168), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/70 (48%), Positives = 42/70 (60%)

Query: 10  SEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGTATAHLINSF 69
           ++ N     K PG+GWM A                RKIMI+D+KLTYPSGTATA LIN F
Sbjct: 147 TDGNYPEGTKEPGIGWMTAFLFFTCFVGLLALVPLRKIMIIDYKLTYPSGTATAVLINGF 206

Query: 70  HTTEGARLAK 79
           HT +G ++AK
Sbjct: 207 HTPKGNKMAK 216


>AT3G27020.1 | Symbols: YSL6 | YELLOW STRIPE like 6 |
           chr3:9961623-9964461 REVERSE LENGTH=676
          Length = 676

 Score = 68.9 bits (167), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/67 (50%), Positives = 40/67 (59%)

Query: 12  ANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGTATAHLINSFHT 71
            N A D+  PGL WM+                 RK+M++D+KLTYPSGTATA LINSFHT
Sbjct: 144 GNHAEDVINPGLWWMIGFLFVVSFLGLFSLVPLRKVMVLDYKLTYPSGTATAMLINSFHT 203

Query: 72  TEGARLA 78
             GA LA
Sbjct: 204 NTGAELA 210


>AT5G41000.1 | Symbols: YSL4 | YELLOW STRIPE like 4 |
           chr5:16420910-16423697 FORWARD LENGTH=670
          Length = 670

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/67 (49%), Positives = 37/67 (55%)

Query: 12  ANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGTATAHLINSFHT 71
            N   D+  PGL WM                  RK+MI+D+KLTYPSGTATA LINSFH 
Sbjct: 141 GNNPEDVINPGLWWMTGFLFVVSFLGLFCLVPLRKVMILDYKLTYPSGTATAMLINSFHN 200

Query: 72  TEGARLA 78
             GA LA
Sbjct: 201 NTGAELA 207


>AT4G24120.1 | Symbols: YSL1, ATYSL1 | YELLOW STRIPE like 1 |
           chr4:12524581-12527023 FORWARD LENGTH=673
          Length = 673

 Score = 64.7 bits (156), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/69 (49%), Positives = 38/69 (55%)

Query: 11  EANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGTATAHLINSFH 70
           E N+   +K PGLGWM A                RK+MIVD KLTYPSG ATA LIN FH
Sbjct: 152 EGNSPKSVKEPGLGWMTAYLFVVCFIGLFVLIPLRKVMIVDLKLTYPSGLATAVLINGFH 211

Query: 71  TTEGARLAK 79
           T   A+  K
Sbjct: 212 TQGDAQAKK 220