Miyakogusa Predicted Gene
- Lj0g3v0354019.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0354019.2 Non Chatacterized Hit- tr|G7JNH2|G7JNH2_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,63.74,0,VC0467-like,NULL; Thioredoxin-like,Thioredoxin-like
fold; seg,NULL; no description,Thioredoxin-like ,CUFF.24372.2
(984 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G19780.2 | Symbols: | LOCATED IN: endomembrane system; CONTA... 342 9e-94
AT3G19780.1 | Symbols: | LOCATED IN: endomembrane system; CONTA... 340 2e-93
>AT3G19780.2 | Symbols: | LOCATED IN: endomembrane system; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF179
(InterPro:IPR003774), Thioredoxin fold
(InterPro:IPR012335), Thioredoxin-like fold
(InterPro:IPR012336); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF179)
(TAIR:AT1G33780.1). | chr3:6870238-6874677 FORWARD
LENGTH=1058
Length = 1058
Score = 342 bits (876), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 201/482 (41%), Positives = 279/482 (57%), Gaps = 59/482 (12%)
Query: 544 YQLLKRLTGGCRVPSLELVDPFQQQHYVYPEEKGFNFSSLYVFLSKFLNGTLLPYQQSEH 603
Y LL+ LTG ++PS ++DP QQHYV ++ F++SSL FL +LNG+L PY QSE
Sbjct: 595 YVLLRALTGDVKIPSAVIIDPALQQHYVLQDK--FSYSSLVDFLDGYLNGSLSPYAQSES 652
Query: 604 VLQGQRDAPHPPFVNLDFHEVDSIPRITSHTFSELVIGFNQSNKDNTSNVWNKDVLVLFS 663
+Q + A PPFVNLDFHEVDSIPR+T TFS +V ++QS+ + +DVLV FS
Sbjct: 653 SIQTPKRAAVPPFVNLDFHEVDSIPRVTVSTFSHMVHAWDQSSAEKAPCPLCQDVLVFFS 712
Query: 664 NNWCGFCQRMEIIVREVYRAIKGYVDMLKRGSWNTKES-LDYVT--KNL--PVIYLMDCT 718
N WCGFCQRME+++ EVYR++K Y +++ GS N + S L+ T +NL P+IYLMDCT
Sbjct: 713 NTWCGFCQRMELVLHEVYRSLKEYKAIIQGGSRNNQRSELETPTNGENLKSPLIYLMDCT 772
Query: 719 LNDCDLILKSVDQMGVYPALILFPAEMKKPLLYEGDMAVIDVMKFLAEHGSNFHHLVKEK 778
LNDC LILKS++Q VYP+LILFPAE K YEG+ +V D+ +FLA H +N +
Sbjct: 773 LNDCSLILKSINQREVYPSLILFPAERNKVTPYEGESSVTDITEFLARHANNSREFFR-L 831
Query: 779 VAVLWQTERVVRNENIYDTLQRDIHEESLHTRSKYHTATSQDRMLDLVVRPNLIDSPLSN 838
+ L + R RN N D + + + T D+++++V+R P
Sbjct: 832 LPTLSRNGR--RNSNKVDQSS---------SSAVNNKVTDGDKLVEVVLRNR---EPAER 877
Query: 839 GRLHETL-------------PHVVIGSVLIATEKLLGIQPFDGSKVLSTVLRKMEGGL-- 883
H+ + P V G+VL+ATEKL F SK+L G L
Sbjct: 878 EVNHDQVNSQSPPIHSLTNAPQVKTGTVLVATEKLAASLTFAKSKILIIKAGPEIGFLGL 937
Query: 884 ------------------EKLKEAPLSLGGPVMKSGMPLLSLSRT--VSSNY-LPEVLSG 922
E LKE PLS GGPV+ G+PLL+L+R S+N+ PE+ G
Sbjct: 938 IFNKRIRWKSFPDLGETAELLKETPLSFGGPVVDPGIPLLALTRERDSSTNHDHPEISPG 997
Query: 923 IYFLDHVNTTRAMEEMKSRNTPVADYWFFVGYSSWGWNQLYDEMAEGAWNLSEDGMRHLN 982
+YFLDH + R ++E+KSR ++YWFF+GYSSW + QL+DE+ G W++ +
Sbjct: 998 VYFLDHQSVARRIQELKSRELNPSEYWFFLGYSSWSYEQLFDEIGLGVWDVDNSDI-DFA 1056
Query: 983 WP 984
WP
Sbjct: 1057 WP 1058
>AT3G19780.1 | Symbols: | LOCATED IN: endomembrane system; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF179
(InterPro:IPR003774), Thioredoxin fold
(InterPro:IPR012335), Thioredoxin-like fold
(InterPro:IPR012336); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF179)
(TAIR:AT1G33780.1); Has 74 Blast hits to 72 proteins in
32 species: Archae - 0; Bacteria - 24; Metazoa - 11;
Fungi - 3; Plants - 32; Viruses - 0; Other Eukaryotes - 4
(source: NCBI BLink). | chr3:6870238-6874677 FORWARD
LENGTH=1059
Length = 1059
Score = 340 bits (873), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 200/483 (41%), Positives = 277/483 (57%), Gaps = 60/483 (12%)
Query: 544 YQLLKRLTGGCRVPSLELVDPFQQQHYVYPEEKGFNFSSLYVFLSKFLNGTLLPYQQSEH 603
Y LL+ LTG ++PS ++DP QQHYV ++ F++SSL FL +LNG+L PY QSE
Sbjct: 595 YVLLRALTGDVKIPSAVIIDPALQQHYVLQDK--FSYSSLVDFLDGYLNGSLSPYAQSES 652
Query: 604 VLQGQRDAPHPPFVNLDFHEVDSIPRITSHTFSELVIGFNQSNKDNTSNVWNKDVLVLFS 663
+Q + A PPFVNLDFHEVDSIPR+T TFS +V ++QS+ + +DVLV FS
Sbjct: 653 SIQTPKRAAVPPFVNLDFHEVDSIPRVTVSTFSHMVHAWDQSSAEKAPCPLCQDVLVFFS 712
Query: 664 NNWCGFCQRMEIIVREVYRAIKGYVDMLKRGSWNTKESLDYVT----KNL--PVIYLMDC 717
N WCGFCQRME+++ EVYR++K Y +++ GS N + S T +NL P+IYLMDC
Sbjct: 713 NTWCGFCQRMELVLHEVYRSLKEYKAIIQGGSRNNQRSELAETPTNGENLKSPLIYLMDC 772
Query: 718 TLNDCDLILKSVDQMGVYPALILFPAEMKKPLLYEGDMAVIDVMKFLAEHGSNFHHLVKE 777
TLNDC LILKS++Q VYP+LILFPAE K YEG+ +V D+ +FLA H +N +
Sbjct: 773 TLNDCSLILKSINQREVYPSLILFPAERNKVTPYEGESSVTDITEFLARHANNSREFFR- 831
Query: 778 KVAVLWQTERVVRNENIYDTLQRDIHEESLHTRSKYHTATSQDRMLDLVVRPNLIDSPLS 837
+ L + R RN N D + + + T D+++++V+R P
Sbjct: 832 LLPTLSRNGR--RNSNKVDQSS---------SSAVNNKVTDGDKLVEVVLRNR---EPAE 877
Query: 838 NGRLHETL-------------PHVVIGSVLIATEKLLGIQPFDGSKVLSTVLRKMEGGL- 883
H+ + P V G+VL+ATEKL F SK+L G L
Sbjct: 878 REVNHDQVNSQSPPIHSLTNAPQVKTGTVLVATEKLAASLTFAKSKILIIKAGPEIGFLG 937
Query: 884 -------------------EKLKEAPLSLGGPVMKSGMPLLSLSRT--VSSNY-LPEVLS 921
E LKE PLS GGPV+ G+PLL+L+R S+N+ PE+
Sbjct: 938 LIFNKRIRWKSFPDLGETAELLKETPLSFGGPVVDPGIPLLALTRERDSSTNHDHPEISP 997
Query: 922 GIYFLDHVNTTRAMEEMKSRNTPVADYWFFVGYSSWGWNQLYDEMAEGAWNLSEDGMRHL 981
G+YFLDH + R ++E+KSR ++YWFF+GYSSW + QL+DE+ G W++ +
Sbjct: 998 GVYFLDHQSVARRIQELKSRELNPSEYWFFLGYSSWSYEQLFDEIGLGVWDVDNSDI-DF 1056
Query: 982 NWP 984
WP
Sbjct: 1057 AWP 1059