Miyakogusa Predicted Gene

Lj0g3v0353419.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0353419.1 Non Chatacterized Hit- tr|I1KAJ3|I1KAJ3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,88.22,0,seg,NULL;
Translation proteins SH3-like domain,Translation protein SH3-like; KOW
(Kyprides, Ouzounis,CUFF.24327.1
         (764 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G08350.1 | Symbols: GTA02, GTA2 | global transcription factor...  1109   0.0  
AT2G34210.1 | Symbols:  | Transcription elongation factor Spt5 |...   873   0.0  
AT5G04290.1 | Symbols: KTF1, SPT5L | kow domain-containing trans...   109   6e-24
AT4G08360.1 | Symbols:  | KOW domain-containing protein | chr4:5...    92   1e-18

>AT4G08350.1 | Symbols: GTA02, GTA2 | global transcription factor
            group A2 | chr4:5286351-5292072 FORWARD LENGTH=1041
          Length = 1041

 Score = 1109 bits (2868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 547/771 (70%), Positives = 635/771 (82%), Gaps = 13/771 (1%)

Query: 1    MTDVLSVESKAIDLARDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRVDLQALADK 60
            MTDVLSVESKAIDL+RDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPR+DLQALA K
Sbjct: 261  MTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALASK 320

Query: 61   LEGKEVVKKKAFIPPPRFMNVDEARELHIRVENKKDSY-GERYDAIGGMMFKDGFLYKIV 119
            L+G+EV KKKAF+PPPRFMN+DEARELHIRVE ++D   G+ ++ IGGM+FKDGF YK V
Sbjct: 321  LDGREVSKKKAFVPPPRFMNIDEARELHIRVERRRDHMTGDYFENIGGMLFKDGFHYKQV 380

Query: 120  SIKSISAQNINPTFDELDKFRKPGDGGDGDVASLSTLFANRKKGHFMKGDAVIVVKGDLK 179
            S+KSI+ QN+ PTFDEL+KF KP + G+GD   LSTLFANRKKGHFMKGDAVIV+KGDLK
Sbjct: 381  SLKSITVQNVTPTFDELEKFNKPSENGEGDFGGLSTLFANRKKGHFMKGDAVIVIKGDLK 440

Query: 180  NLKGWVEKVDEDNVHIKPELKDLPKTLAFNEKELCKYFEPGNHVKVVSGAQEGATGMVVK 239
            NLKGWVEKVDE+NV I+ E+K LP  LA NE+ELCKYFEPGNHVKVVSG  EGATGMVVK
Sbjct: 441  NLKGWVEKVDEENVLIRSEVKGLPDPLAVNERELCKYFEPGNHVKVVSGTHEGATGMVVK 500

Query: 240  VDQHVLILISDTTKEHIRVFADDVVESSEVTTGITKIGDYELRDLVELDNSNFGVIIRVE 299
            VDQHVLI++SDTTKEH+RVFAD VVESSEVTTG+TKIGDYEL DLV LDN +FGVIIR+E
Sbjct: 501  VDQHVLIILSDTTKEHVRVFADHVVESSEVTTGVTKIGDYELHDLVLLDNLSFGVIIRLE 560

Query: 300  SEAVQVLKGVPDRPEVVLVKLREIKRKIDRKMSVQDKLKNTVSSKDVVRIVEGPCRGKQG 359
            +EA QVLKGVPDRPEV LVKLREIK K+++K++VQD+ KN ++ KD VR++EGP +GKQG
Sbjct: 561  NEAFQVLKGVPDRPEVALVKLREIKCKLEKKINVQDRYKNVIAVKDDVRVIEGPSKGKQG 620

Query: 360  PVEHIYRRILFIFDRHHLEHAGFICAKAQSCXXXXXXXXXXDRNG-DAYSKLSAFRTPPP 418
            PV+HIY+ +LFI+DRHHLEHAGFICAK  SC          +RNG D+ S+   F+ P P
Sbjct: 621  PVKHIYKGVLFIYDRHHLEHAGFICAKCTSCIVVGGSRSGANRNGGDSLSRYGNFKAPAP 680

Query: 419  IPDSPKXXXXXXXXXXXXXXXXXXXXXXXXXXX---TTVKVRQGPYKGYRGRVIEVKGAM 475
            +P SP                               TTVK+R GP+KGYRG V+EVKG  
Sbjct: 681  VPSSPGRFQRGRGGGYNNSGGRHGGGRGRGDDSLLGTTVKIRLGPFKGYRGPVVEVKGNS 740

Query: 476  VRVELESQMKVVTVDRNHISDNVAVTPYRDTTRYGMGSETPMHPSRTPLHPYMTPMRDPG 535
            VRVELE  MK+VTVDR  ISDNVA TP+RDT+RY MGSETPMHPSRTPLHPYMTPMRD G
Sbjct: 741  VRVELE--MKIVTVDRGAISDNVATTPFRDTSRYSMGSETPMHPSRTPLHPYMTPMRDSG 798

Query: 536  ATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGASPQYQPGSPPSRPYEAPTPG 595
            ATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWG SPQYQPGSPPSR YEAPTPG
Sbjct: 799  ATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPG 858

Query: 596  AGWASTPGGNYSEAGTPRDN-SAYANAPSPYLPSTPGGQPMTPNSASYLXXXXXXXXXXX 654
            +GWASTPGG+YS+AGTPRD+ SAYANAPSPYLPSTP GQPMTP+SASYL           
Sbjct: 859  SGWASTPGGSYSDAGTPRDHGSAYANAPSPYLPSTP-GQPMTPSSASYL-PGTPGGQPMT 916

Query: 655  XXXXLDMMSPVLGGDNEGPWFIPDILVNVHRGGEES-IGVIKEILQDGSCRVALGPSGNG 713
                LD+MSPV+GGD E  WF+PDILV++H+ GE++ +GVI+++  DG+C+V+LG SG G
Sbjct: 917  PGTGLDVMSPVIGGDAEA-WFMPDILVDIHKAGEDTDVGVIRDV-SDGTCKVSLGSSGEG 974

Query: 714  ETLTVLPTEMEAVVPRKSDKIKIMGGALRGATGKLIGVDGTDGIVKVDDTL 764
            +T+  LP+E+E + PRKSD++KI+GG  RG+TGKLIG+DG+DGIVK+DD L
Sbjct: 975  DTIMALPSELEIIPPRKSDRVKIVGGQYRGSTGKLIGIDGSDGIVKIDDNL 1025


>AT2G34210.1 | Symbols:  | Transcription elongation factor Spt5 |
           chr2:14445938-14450522 FORWARD LENGTH=989
          Length = 989

 Score =  873 bits (2255), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/782 (59%), Positives = 565/782 (72%), Gaps = 74/782 (9%)

Query: 1   MTDVLSVESKAIDLARDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRVDLQALADK 60
           MT VLSVESKAIDL+RD+WVRMK+G YKGDLA+VVDVDNVR+RVTVKLIPR+DLQALA+K
Sbjct: 248 MTAVLSVESKAIDLSRDSWVRMKLGIYKGDLAQVVDVDNVRKRVTVKLIPRIDLQALANK 307

Query: 61  LEGKEVVKKKAFIPPPRFMNVDEARELHIRVENKKDSY-GERYDAIGGMMFKDGFLYKIV 119
           LEG E VKKKAF PPPRFMN+DEARELHIRVE+++D   G+ ++ IGGM+FKDGFLYK V
Sbjct: 308 LEGTENVKKKAFAPPPRFMNIDEARELHIRVEHRRDPMTGDYFENIGGMLFKDGFLYKKV 367

Query: 120 SIKSISAQNINPTFDELDKFRKPGDGGDGDVASLSTLFANRKKGHFMKGDAVIVVKGDLK 179
           S KSI+AQN+ PTFDEL++F++P + G+ D    STLFANRKKGHFMKGDAVIV+KGDLK
Sbjct: 368 STKSIAAQNVTPTFDELERFKRPNENGEIDFVDESTLFANRKKGHFMKGDAVIVIKGDLK 427

Query: 180 NLKGWVEKVDEDNVHIKPELKDLPKTLAFNEKELCKYFEPGNHVKVVSGAQEGATGMVVK 239
           NLKGW+EKVDE+NV I+ E+KDLP  +A N +ELCKYFEPGN VKVVSG  EG TGM+VK
Sbjct: 428 NLKGWIEKVDEENVLIRSEMKDLPNPIAVNGRELCKYFEPGNFVKVVSGIHEGGTGMIVK 487

Query: 240 VDQHVLILISDTTKEHIRVFADDVVESSEVTTGITKIGDYELRDLVELDNSNFGVIIRVE 299
           VDQH+LI++SDTTKEHI VFAD V +S+EVT G+TKIGDYEL DLV L + +FGVI++++
Sbjct: 488 VDQHMLIILSDTTKEHICVFADHVAKSAEVTKGVTKIGDYELHDLVILSDFSFGVILKLD 547

Query: 300 SEAVQVLKGVPDRPEVVLVKLREIKRKIDRKMSVQDKLKNTVSSKDVVRIVEGPCRGKQG 359
           SEA+Q+LKGVPD  EV +VK  EIK KI +K++VQD+ KN V+ KDVVR++EGP +GKQG
Sbjct: 548 SEAIQILKGVPDSSEVSIVKASEIKYKIWKKINVQDRYKNVVAVKDVVRVIEGPSKGKQG 607

Query: 360 PVEHIYRRILFIFDRHHLEHAGFICAKAQSCXXXXXXXXXXDRNGDAYSKLSAFRTPPPI 419
           PV  IY+ +LFI DRH+LEH GFIC +  SC                      F+TP  +
Sbjct: 608 PVVQIYKGVLFIHDRHNLEHTGFICTRCSSCVLAG----------------GNFKTPALV 651

Query: 420 PDSPKXXXXXXX----XXXXXXXXXXXXXXXXXXXXTTVKVRQGPYKGYRGRVIEVKGAM 475
           P SP+                               T VK+R GP+KGY GR++EVK  +
Sbjct: 652 PPSPRRFQRADMGYNPGAGGRHQGGRGRRGDDHLVGTYVKIRLGPFKGYSGRLVEVKDKL 711

Query: 476 VRVELESQMKVVTVDRNHIS---DNVAVTPYRDTTRYGMGSETPMHPSRTPLHPYMTPMR 532
           VRVELE+  K+VTV+R  IS   DNV  TP     +Y MGS+TPMHPSRTPLHP MTPMR
Sbjct: 712 VRVELEA--KIVTVERKAISDMTDNVVATP-----QYNMGSQTPMHPSRTPLHPCMTPMR 764

Query: 533 DPGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGASPQYQPGSPPSRPYEAP 592
             GATPIHDGMRTPMR RAWNPY PMSPPRDNWEDGNPGSWG S           PYEA 
Sbjct: 765 HSGATPIHDGMRTPMRGRAWNPYMPMSPPRDNWEDGNPGSWGTS-----------PYEAA 813

Query: 593 TPGAGW-ASTPG-GNYSEAGTPRDNSAYANAPSP-------YLPSTPGGQPMTPNSASYL 643
           TPG+ W +STPG  +Y +AGTP +N   ANAPSP       YLP+TPGGQ MTP +    
Sbjct: 814 TPGSDWGSSTPGRSSYRDAGTPINN---ANAPSPMTPSSTSYLPTTPGGQAMTPGT---- 866

Query: 644 XXXXXXXXXXXXXXXLDMMSPVLGGDNEGPWFIPDILVNVHRGGEE-SIGVIKEILQDGS 702
                          LD+MS  +GGD E   FIP ILVNVH+ GE+ + GVI+++L DGS
Sbjct: 867 --------------DLDVMSLDIGGDAE-TRFIPGILVNVHKAGEDRNPGVIRDVLPDGS 911

Query: 703 CRVALGPSGNGETLTVLPTEMEAVVPRKSDKIKIMGGALRGATGKLIGVDGTDGIVKVDD 762
           C VALG  G GET+     ++  V P+K++++KI+GG   G+T K+IG DG DGIVK+D+
Sbjct: 912 CVVALGHRGEGETIRATQNKVSLVCPKKNERVKILGGKYCGSTAKVIGEDGQDGIVKLDE 971

Query: 763 TL 764
           +L
Sbjct: 972 SL 973


>AT5G04290.1 | Symbols: KTF1, SPT5L | kow domain-containing
           transcription factor 1 | chr5:1196069-1202653 FORWARD
           LENGTH=1493
          Length = 1493

 Score =  109 bits (273), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 105/221 (47%), Gaps = 4/221 (1%)

Query: 279 YELRDLVELDNSNFGVIIRVE--SEAVQVLKGVPDRPEVVLVKLREIKRK-IDRKMSVQD 335
           YEL +LV     +FG+I+ V+   +  +VLK   D P VV V  +E++    D K +  D
Sbjct: 437 YELYNLVCFSRKDFGLIVGVDDKGDGYKVLKEGIDGPVVVTVGKKEMQNGPFDSKFTALD 496

Query: 336 KLKNTVSSKDVVRIVEGPCRGKQGPVEHIYRRILFIFDRHHLEHAGFICAKAQSCXXXXX 395
             K  +S  DVV+I +GP  GKQG V  +YR I+F++D    E+ G+ C K+QSC     
Sbjct: 497 LNKKQISVNDVVKISKGPSEGKQGVVRQVYRGIIFLYDESEEENGGYFCCKSQSCEKVKL 556

Query: 396 XXXXXDRNGDAYSKLSAFRTPPPIPDSPKXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVK 455
                +     +   +AF      P SP                              ++
Sbjct: 557 FTEESNEKTGGFDG-TAFEDFVSSPKSPLSPEKEWQPRERYNSSNQGDIGSTYSIGQKLR 615

Query: 456 VRQGPYKGYRGRVIEVKGAMVRVELESQMKVVTVDRNHISD 496
           +R GP KGY  RVI ++ + V V+L+SQ K+ TV   H+++
Sbjct: 616 IRVGPLKGYLCRVIALRYSDVTVKLDSQHKIFTVKSEHLAE 656



 Score =  108 bits (271), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 12/166 (7%)

Query: 3   DVLSVESKAIDLARDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRVDLQALADKLE 62
           ++L+V+ K   ++  TW R+K G YKGDLA++V V + R +  +KLIPR+D+QAL  K  
Sbjct: 229 NLLTVQKKTKKVSEGTWARVKNGKYKGDLAQIVAVSDTRNKALIKLIPRIDIQALTQKY- 287

Query: 63  GKEVVKKKAFIPPPRFMNVDEARELH--IRVENKKDSYGERYDAIGGMMFKDGFLYKIVS 120
           G  V  +K   P PR ++  E  E    I+V   +D+ G  ++ +  +M KDG+LYK VS
Sbjct: 288 GGGVTVQKGQTPAPRLISSSELEEFRPLIQVRRDRDT-GITFEHLDSLMLKDGYLYKKVS 346

Query: 121 IKSISAQNINPTFDELDKF----RKPGDGGDGDVASLSTLFANRKK 162
           + SIS+  + PT DEL KF    RK      GDV  +S ++   +K
Sbjct: 347 LDSISSWGVIPTKDELLKFTPVDRKE----TGDVEWISEIYGEERK 388


>AT4G08360.1 | Symbols:  | KOW domain-containing protein |
           chr4:5295933-5296947 FORWARD LENGTH=141
          Length = 141

 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/90 (52%), Positives = 63/90 (70%), Gaps = 4/90 (4%)

Query: 675 FIPDILVNVHRGGEESIGVIKEILQDGSCRVALGPSGNGETLTVLPTEMEAVVPRKSDKI 734
           F+PDILV VH      +GVI+++  DG C+V+LG  G G+T+ V  +E+E V PRKSD +
Sbjct: 40  FMPDILVTVHN---SEVGVIRDV-SDGMCKVSLGSGGEGDTIMVPSSELEIVRPRKSDHV 95

Query: 735 KIMGGALRGATGKLIGVDGTDGIVKVDDTL 764
           KI+GG+  G T KLIG+DG D IVK+D  L
Sbjct: 96  KILGGSYLGLTCKLIGIDGLDAIVKIDGNL 125