Miyakogusa Predicted Gene
- Lj0g3v0353299.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0353299.2 tr|F2DEB0|F2DEB0_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,59.63,2e-16,seg,NULL;
EDR1,Armadillo repeat-containing protein 3 and
Serine/threonine-protein kinase CTR1,CUFF.24347.2
(276 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G31010.2 | Symbols: | Protein kinase superfamily protein | c... 263 1e-70
AT2G31010.1 | Symbols: | Protein kinase superfamily protein | c... 263 1e-70
AT3G58640.2 | Symbols: | Mitogen activated protein kinase kinas... 258 2e-69
AT3G58640.1 | Symbols: | Mitogen activated protein kinase kinas... 258 2e-69
AT2G42640.1 | Symbols: | Mitogen activated protein kinase kinas... 180 1e-45
AT1G73660.1 | Symbols: | protein tyrosine kinase family protein... 56 2e-08
AT1G18160.1 | Symbols: | Protein kinase superfamily protein | c... 50 2e-06
>AT2G31010.2 | Symbols: | Protein kinase superfamily protein |
chr2:13194939-13199642 FORWARD LENGTH=775
Length = 775
Score = 263 bits (672), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 128/176 (72%), Positives = 147/176 (83%), Gaps = 2/176 (1%)
Query: 1 MVKQLIVTLVKGLNSNPAAIIKKIAGLVSDFYKRPNVESPAKAALDETPHMFENRLVQML 60
M+KQLI TLV G +NPA +IKKIAG VSDFYKRP +ESP+K AL+E +FEN Q+L
Sbjct: 117 MLKQLITTLVSGSGTNPALVIKKIAGTVSDFYKRPTLESPSKLALEENAFLFENHGAQLL 176
Query: 61 GQIKHGSCRPRAILFKVLADTVGLESRLMVGLPNEGAIGCGDSHKHMSVTVVLNSVEMLV 120
GQIK G CR RAILFKVLADTVGLESRL+VGLP++G + C DS+KHMSV VVLNSVE+LV
Sbjct: 177 GQIKRGCCRARAILFKVLADTVGLESRLVVGLPSDGTVNCMDSNKHMSVIVVLNSVELLV 236
Query: 121 DLMRFPGQLLPRSTKAVLMTHISAAGESDSAENDSCDSPLEPNSPLFGV--PESPE 174
DL+RFPGQL+PRS KA+ M+HIS AGESDSAENDSCDSPLEPNSPL+ PES E
Sbjct: 237 DLIRFPGQLVPRSAKAIFMSHISPAGESDSAENDSCDSPLEPNSPLYERRDPESTE 292
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 172 SPEHPSYRARARSLLSGDRKAFREFADDQATXXXXXXXXXXXXLEPXXXXXXXXXXTPEI 231
SPEHPS R R RS+LS R +FR++ + ++ E TPEI
Sbjct: 361 SPEHPSMR-RGRSMLSTGRNSFRDYTGEASSPSSSSTS------EIRKTRRRSFRITPEI 413
Query: 232 GDDIVRAVRAMNETLKQNRLLREQGDDNS 260
GDDI AVR M E KQNRLL+ + D+NS
Sbjct: 414 GDDIASAVREMYEKSKQNRLLQGREDENS 442
>AT2G31010.1 | Symbols: | Protein kinase superfamily protein |
chr2:13194939-13199642 FORWARD LENGTH=775
Length = 775
Score = 263 bits (672), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 128/176 (72%), Positives = 147/176 (83%), Gaps = 2/176 (1%)
Query: 1 MVKQLIVTLVKGLNSNPAAIIKKIAGLVSDFYKRPNVESPAKAALDETPHMFENRLVQML 60
M+KQLI TLV G +NPA +IKKIAG VSDFYKRP +ESP+K AL+E +FEN Q+L
Sbjct: 117 MLKQLITTLVSGSGTNPALVIKKIAGTVSDFYKRPTLESPSKLALEENAFLFENHGAQLL 176
Query: 61 GQIKHGSCRPRAILFKVLADTVGLESRLMVGLPNEGAIGCGDSHKHMSVTVVLNSVEMLV 120
GQIK G CR RAILFKVLADTVGLESRL+VGLP++G + C DS+KHMSV VVLNSVE+LV
Sbjct: 177 GQIKRGCCRARAILFKVLADTVGLESRLVVGLPSDGTVNCMDSNKHMSVIVVLNSVELLV 236
Query: 121 DLMRFPGQLLPRSTKAVLMTHISAAGESDSAENDSCDSPLEPNSPLFGV--PESPE 174
DL+RFPGQL+PRS KA+ M+HIS AGESDSAENDSCDSPLEPNSPL+ PES E
Sbjct: 237 DLIRFPGQLVPRSAKAIFMSHISPAGESDSAENDSCDSPLEPNSPLYERRDPESTE 292
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 172 SPEHPSYRARARSLLSGDRKAFREFADDQATXXXXXXXXXXXXLEPXXXXXXXXXXTPEI 231
SPEHPS R R RS+LS R +FR++ + ++ E TPEI
Sbjct: 361 SPEHPSMR-RGRSMLSTGRNSFRDYTGEASSPSSSSTS------EIRKTRRRSFRITPEI 413
Query: 232 GDDIVRAVRAMNETLKQNRLLREQGDDNS 260
GDDI AVR M E KQNRLL+ + D+NS
Sbjct: 414 GDDIASAVREMYEKSKQNRLLQGREDENS 442
>AT3G58640.2 | Symbols: | Mitogen activated protein kinase kinase
kinase-related | chr3:21687153-21692675 REVERSE
LENGTH=809
Length = 809
Score = 258 bits (660), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/173 (72%), Positives = 145/173 (83%), Gaps = 5/173 (2%)
Query: 3 KQLIVTLVKGLNSNPAAIIKKIAGLVSDFYKRPNVESPAKAALDETPHMFENRLVQMLGQ 62
KQLI LV GLNS PA IIKKIAGLV+D YK+ ++SPAK+ FEN +Q+LGQ
Sbjct: 127 KQLITKLVSGLNSKPATIIKKIAGLVADVYKQSTLQSPAKST-----QSFENCGIQLLGQ 181
Query: 63 IKHGSCRPRAILFKVLADTVGLESRLMVGLPNEGAIGCGDSHKHMSVTVVLNSVEMLVDL 122
IKHGSCRPRAILFKVLADTVGL+SRL+VGLP++GA DS+ H+SVTV+LNSVEMLVDL
Sbjct: 182 IKHGSCRPRAILFKVLADTVGLQSRLVVGLPSDGAAESVDSYSHISVTVLLNSVEMLVDL 241
Query: 123 MRFPGQLLPRSTKAVLMTHISAAGESDSAENDSCDSPLEPNSPLFGVPESPEH 175
MRFPGQL+P STKA+ M+HISAAGESDSAENDSCDSPLEPNSP+FG PE +H
Sbjct: 242 MRFPGQLIPLSTKAIFMSHISAAGESDSAENDSCDSPLEPNSPMFGYPEKFDH 294
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
Query: 172 SPEHPSYRARARSLLSGDRKAFREFADDQATXXXXXXXXXXXXLEPXXXXXXXXXXTPEI 231
SPEH S+RAR +S+LSGD+ R+F D AT +E TPEI
Sbjct: 366 SPEHLSFRARTKSMLSGDKNLARDFTGDVATSSCKSVGGAK--METKRIRRRSISITPEI 423
Query: 232 GDDIVRAVRAMNETLKQNRLLREQGDDNSFSHSPNNRSTDANLQK 276
GDDIVRAVRAMNE LKQNRL +EQGDD+S +SPN+R+ ++LQK
Sbjct: 424 GDDIVRAVRAMNEALKQNRLSKEQGDDDSSPNSPNDRTESSHLQK 468
>AT3G58640.1 | Symbols: | Mitogen activated protein kinase kinase
kinase-related | chr3:21687153-21692675 REVERSE
LENGTH=809
Length = 809
Score = 258 bits (660), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/173 (72%), Positives = 145/173 (83%), Gaps = 5/173 (2%)
Query: 3 KQLIVTLVKGLNSNPAAIIKKIAGLVSDFYKRPNVESPAKAALDETPHMFENRLVQMLGQ 62
KQLI LV GLNS PA IIKKIAGLV+D YK+ ++SPAK+ FEN +Q+LGQ
Sbjct: 127 KQLITKLVSGLNSKPATIIKKIAGLVADVYKQSTLQSPAKST-----QSFENCGIQLLGQ 181
Query: 63 IKHGSCRPRAILFKVLADTVGLESRLMVGLPNEGAIGCGDSHKHMSVTVVLNSVEMLVDL 122
IKHGSCRPRAILFKVLADTVGL+SRL+VGLP++GA DS+ H+SVTV+LNSVEMLVDL
Sbjct: 182 IKHGSCRPRAILFKVLADTVGLQSRLVVGLPSDGAAESVDSYSHISVTVLLNSVEMLVDL 241
Query: 123 MRFPGQLLPRSTKAVLMTHISAAGESDSAENDSCDSPLEPNSPLFGVPESPEH 175
MRFPGQL+P STKA+ M+HISAAGESDSAENDSCDSPLEPNSP+FG PE +H
Sbjct: 242 MRFPGQLIPLSTKAIFMSHISAAGESDSAENDSCDSPLEPNSPMFGYPEKFDH 294
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
Query: 172 SPEHPSYRARARSLLSGDRKAFREFADDQATXXXXXXXXXXXXLEPXXXXXXXXXXTPEI 231
SPEH S+RAR +S+LSGD+ R+F D AT +E TPEI
Sbjct: 366 SPEHLSFRARTKSMLSGDKNLARDFTGDVATSSCKSVGGAK--METKRIRRRSISITPEI 423
Query: 232 GDDIVRAVRAMNETLKQNRLLREQGDDNSFSHSPNNRSTDANLQK 276
GDDIVRAVRAMNE LKQNRL +EQGDD+S +SPN+R+ ++LQK
Sbjct: 424 GDDIVRAVRAMNEALKQNRLSKEQGDDDSSPNSPNDRTESSHLQK 468
>AT2G42640.1 | Symbols: | Mitogen activated protein kinase kinase
kinase-related | chr2:17758532-17763708 REVERSE
LENGTH=781
Length = 781
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/281 (39%), Positives = 162/281 (57%), Gaps = 35/281 (12%)
Query: 1 MVKQLIVTLVKGLNSNPAAIIKKIAGLVSDFYKRPNVESPAKAALDETPHMFENRLVQML 60
++K+ ++ LV GL+S+ +IKKIAGLV++ YKR ++SPA+ T F+ + +L
Sbjct: 193 LIKEFVIKLVTGLDSD--KVIKKIAGLVANIYKRKTLQSPAR-----TLQYFDVQGFTLL 245
Query: 61 GQIKHGSCRPRAILFKVLADTVGLESRLMVGLPNEGAIGCG-DSHKHMSVTVVLNSVEML 119
GQIKHGSCR RAILFKVLAD VGL+S+L++G P + DS+ H+S V LN+VEML
Sbjct: 246 GQIKHGSCRARAILFKVLADAVGLDSKLVMGFPTDLRFSASIDSYNHISAVVELNNVEML 305
Query: 120 VDLMRFPGQLLPRSTKAVLMTHISAAGESDSAENDSCDSPLEPNSPL--FGVPESPEHPS 177
VDL R PGQL P S KAV M HIS A + D +N+ C SPLEPNSP+ G P + +
Sbjct: 306 VDLKRCPGQLKPFSPKAVYMAHISMAWQPDFVDNNPCASPLEPNSPMERSGPPSALQSGL 365
Query: 178 YRARARSLLSGD---RKAFRE-----FADDQATXXXXXXXXXXXXLEPXXXXXXXXXXTP 229
R+ ++ + RK +E F+ + + TP
Sbjct: 366 SRSLGEPNIATEVLRRKVIKEPPPADFSGNSGAAESESKRTNGRCMN-----------TP 414
Query: 230 EIGDDIVRAVRAMNETLKQNRLLREQGDDNSFSHSPNNRST 270
++ +DI RA T+ Q+ LL+E+G D+S +SP+ ++
Sbjct: 415 DLNNDIARA------TMMQSDLLKERGVDDSSPYSPDEKNV 449
>AT1G73660.1 | Symbols: | protein tyrosine kinase family protein |
chr1:27692247-27696718 REVERSE LENGTH=1030
Length = 1030
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 18 AAIIKKIAGLVSDFYKRPNV--ESPAKA--ALDETPHMFENRLVQMLGQIKHGSCRPRAI 73
+ +++K+A LV D+ P V ES +A +L + +V LG + G R RA+
Sbjct: 272 SELVRKLAILVGDYMGGPVVHPESMLRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRAL 331
Query: 74 LFKVLADTVGLESRLMVGLPNEGAIGCGDSHKHMSVTVVLNSVEMLVDLMRFPGQLLPRS 133
LFKVL D+VG+ R++ G G+ M+ + E +VDLM PG L+P
Sbjct: 332 LFKVLCDSVGVPCRIVKGQQYTGSEDVA-----MNFIKADDGREYIVDLMGDPGTLIPAD 386
Query: 134 TKAVLMTHISAAGESDSAENDSCDSPLEPNSPLFGVPESPEHPSYRARARSLLSGDR 190
+ + + +A + +NDS N E+ E + R+ + SG+R
Sbjct: 387 AAGLQIDYDESAYSASPGDNDSIHVASSSNGIESSYEENTEFRTGEHRSSTKSSGER 443
>AT1G18160.1 | Symbols: | Protein kinase superfamily protein |
chr1:6249126-6253835 FORWARD LENGTH=992
Length = 992
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 21/132 (15%)
Query: 18 AAIIKKIAGLVSDFYKRPNVESP----AKAALDETPHMFENRLVQMLGQIKHGSCRPRAI 73
+ +++++A LV+D+ P ++ A +L + +V LG + G R RA+
Sbjct: 248 SELVRQLAVLVADYMGGPVLDPDSTLRAWWSLSYSLKATLRSMVLPLGSLTIGLARHRAL 307
Query: 74 LFKVLADTVGLESRLMVGLPNEGAIGCGDSHKHMSVTVVLNSV------EMLVDLMRFPG 127
LFKVL D+VG+ R++ G G S V +NS+ E +VDLM PG
Sbjct: 308 LFKVLCDSVGVPCRIVKGQQYTG-----------SDDVAMNSIKTDDGREYIVDLMGDPG 356
Query: 128 QLLPRSTKAVLM 139
L+P + M
Sbjct: 357 TLIPADAAGLQM 368