Miyakogusa Predicted Gene

Lj0g3v0353159.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0353159.1 Non Chatacterized Hit- tr|I1K6K2|I1K6K2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22404
PE,75.65,0,Tryptophan synthase beta subunit-like PLP-dependent
enzymes,Tryptophan synthase beta subunit-like PL,gene.g27704.t1.1
         (235 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G11640.1 | Symbols: ATSR, SR | serine racemase | chr4:7021770...   342   1e-94
AT3G10050.1 | Symbols: OMR1 | L-O-methylthreonine resistant 1 | ...    99   3e-21

>AT4G11640.1 | Symbols: ATSR, SR | serine racemase |
           chr4:7021770-7023252 FORWARD LENGTH=331
          Length = 331

 Score =  342 bits (876), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 167/226 (73%), Positives = 196/226 (86%)

Query: 5   MQITKGKYAADISSIREAAERIKPYVHRTPVLTSISLDAMSGRQLHFKCECWQKCGAFKF 64
           M+  + KYAADI SI+EA +RIKPY+HRTPVLTS SL+++SGR L FKCEC QK GAFKF
Sbjct: 1   MEANREKYAADILSIKEAHDRIKPYIHRTPVLTSESLNSISGRSLFFKCECLQKGGAFKF 60

Query: 65  RGAYNAVFSLHDEEAAKGVITHSSGNHAAALSLAAKLRGIPAFIVVPKTAPTCKVDNVMR 124
           RGA NAV SL  E+AAKGV+THSSGNHAAALSLAAK++GIPA+IVVPK AP CKVDNV+R
Sbjct: 61  RGACNAVLSLDAEQAAKGVVTHSSGNHAAALSLAAKIQGIPAYIVVPKGAPKCKVDNVIR 120

Query: 125 YGGHVIFSEDTIKSREETAARVQQETGGILIPSSNDGRIMSGQGTISLELLEQVPNLDAL 184
           YGG VI+SE T+ SREE A++V QETG +LI   NDGRI+SGQGTI+LELLEQ+  +DA+
Sbjct: 121 YGGKVIWSEATMSSREEIASKVLQETGSVLIHPYNDGRIISGQGTIALELLEQIQEIDAI 180

Query: 185 VVPISGGGMISGLALAAKSINPAIRILAAEPNGADDAAQSKAAGRI 230
           VVPISGGG+ISG+ALAAKSI P+IRI+AAEP GADDAAQSK AG+I
Sbjct: 181 VVPISGGGLISGVALAAKSIKPSIRIIAAEPKGADDAAQSKVAGKI 226


>AT3G10050.1 | Symbols: OMR1 | L-O-methylthreonine resistant 1 |
           chr3:3099164-3101741 REVERSE LENGTH=592
          Length = 592

 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 105/197 (53%), Gaps = 1/197 (0%)

Query: 33  TPVLTSISLDAMSGRQLHFKCECWQKCGAFKFRGAYNAVFSLHDEEAAKGVITHSSGNHA 92
           +P+  +  L    G +++ K E  Q   +FK RGAYN +  L  ++ AKGVI  S+GNHA
Sbjct: 111 SPLQLAKKLSKRLGVRMYLKREDLQPVFSFKLRGAYNMMVKLPADQLAKGVICSSAGNHA 170

Query: 93  AALSLAAKLRGIPAFIVVPKTAPTCKVDNVMRYGGHVIFSEDTIKSREETAARVQQETGG 152
             ++L+A   G  A IV+P T P  K   V   G  V+   D+    +  A    +E G 
Sbjct: 171 QGVALSASKLGCTAVIVMPVTTPEIKWQAVENLGATVVLFGDSYDQAQAHAKIRAEEEGL 230

Query: 153 ILIPSSNDGRIMSGQGTISLELLEQVPN-LDALVVPISGGGMISGLALAAKSINPAIRIL 211
             IP  +   +++GQGT+ +E+  Q    L A+ VP+ GGG+I+G+A   K ++P ++I+
Sbjct: 231 TFIPPFDHPDVIAGQGTVGMEITRQAKGPLHAIFVPVGGGGLIAGIAAYVKRVSPEVKII 290

Query: 212 AAEPNGADDAAQSKAAG 228
             EP  A+  A S   G
Sbjct: 291 GVEPADANAMALSLHHG 307