Miyakogusa Predicted Gene

Lj0g3v0353039.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0353039.1 Non Chatacterized Hit- tr|C5WXL4|C5WXL4_SORBI
Putative uncharacterized protein Sb01g033250
OS=Sorghu,52.27,0.000001,WW_DOMAIN_2,WW/Rsp5/WWP; no description,NULL;
OS03G0396900 PROTEIN,NULL; S-ADENOSYLMETHIONINE-DEPEND,CUFF.24297.1
         (510 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G45231.2 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   236   3e-62
AT1G30550.2 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   151   1e-36
AT1G30550.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   149   4e-36

>AT1G45231.2 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr1:17148019-17151194 REVERSE LENGTH=538
          Length = 538

 Score =  236 bits (602), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 178/510 (34%), Positives = 237/510 (46%), Gaps = 110/510 (21%)

Query: 16  LGSLFKITQVFLWDDGLQLPLSTQQS--KFTQEPHXXXXXXXXXXXXXXILPEDLELNKE 73
           LGSLFK+TQ+ LW D    PL  Q S  K   + +                     L KE
Sbjct: 19  LGSLFKLTQIHLWVD-TDTPLFHQHSGNKSVDDTYGIANNG---------------LMKE 62

Query: 74  MNELGLPLSFQTTKQKCGTVKG-KRKGARSKQQHPSHDPVAETLYEANVEEVASLAEFHD 132
           MN+LGLP+SF+T KQ     +G ++KG + +                  EEV  + +  D
Sbjct: 63  MNDLGLPVSFRTNKQWKNRTRGYQKKGFKDRLD----------------EEVNVILKVED 106

Query: 133 KTNSSISCISILGQSESSYCDGAVEVDMTHCASGEGELESLP--TCSEGSG-CDRIDGSN 189
               +++ +S L +   S C    E D       E E   +   +C  G+G  D +  S 
Sbjct: 107 ----TLNLVSALNEEVESPC---FEEDCVQVIEVEEENHEVVVGSCFLGNGDGDSVLASE 159

Query: 190 YCSEHGE--WMVLWDTFYKRRYFYNVTTDSSTWDPPPGMEHLAIGGSTESDDNEALKSAE 247
               H    W V WD+FY R YFYN  T  S W+PP GMEHLA              S E
Sbjct: 160 TIDSHDSSVWKVYWDSFYGRSYFYNFKTQESKWEPPLGMEHLAY-------------SDE 206

Query: 248 DHGTQNNNEPPDETWIEENASGKPHEGYSAQTGVAAGNFVFEMATNNEDQSIDHSDENFE 307
            H             + E    K H+  S   G   G+                 D  F+
Sbjct: 207 SHN------------LSELVIEKHHDDLS---GTVLGD-----------------DVPFD 234

Query: 308 SSCNDGVSCCSVLNA-----LDHIISSNGRYIQEEPEVDHTPMENMVIDISELDTESDPS 362
            + + G  C S L A     ++ +I +     QE      T + N  +DI+ L  E   +
Sbjct: 235 KADDLGGVCQSQLEAEATEEVNSLIDT----YQE------TSIGNQSLDITSLGEEGTGA 284

Query: 363 ---TSXXXXXXXXXXXXXXXXLYNETEDLHFQNIPEAYSATIGKYWCQRYILFSRFDDGV 419
              +S                L N       + +PE YS  +GKYWCQRY+LFSRFD+G+
Sbjct: 285 YVVSSVRKAKKESRRSRAKKKLLNSYTGTEMKGVPEEYSPILGKYWCQRYLLFSRFDEGI 344

Query: 420 KMDEEGWFSVTPEAVARYQSIRCASSTIIDCFAGVGGNAIQFTQRCGHVIAIDIDPLKID 479
           KMDEEGWFSVTPE +A++ + RC    +IDCF GVGGNAIQF  R  +VIAID+DP K+D
Sbjct: 345 KMDEEGWFSVTPELIAKHHATRCNEGIVIDCFTGVGGNAIQFASRSHYVIAIDLDPKKLD 404

Query: 480 YARHNASIYGVDDQIEFIIGDFFLLAPKLK 509
            A+HNA+IYGV D+I+F+ GDFF LA  LK
Sbjct: 405 LAKHNAAIYGVADKIDFVKGDFFDLAHNLK 434


>AT1G30550.2 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr1:10822341-10823641 REVERSE LENGTH=221
          Length = 221

 Score =  151 bits (381), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 65/109 (59%), Positives = 83/109 (76%)

Query: 401 IGKYWCQRYILFSRFDDGVKMDEEGWFSVTPEAVARYQSIRCASSTIIDCFAGVGGNAIQ 460
           I +YW QRY LFS++D G++MDEEGW+SVTPE +A  Q+ RC    +IDCF+GVGGN IQ
Sbjct: 19  ISRYWIQRYDLFSKYDQGIEMDEEGWYSVTPEEIAIKQAERCRGKVVIDCFSGVGGNTIQ 78

Query: 461 FTQRCGHVIAIDIDPLKIDYARHNASIYGVDDQIEFIIGDFFLLAPKLK 509
           F + C  VIAIDIDP+KI  A +NA +YGV ++I+F+ GDF  LAP LK
Sbjct: 79  FAKVCSSVIAIDIDPMKIALAMNNAKVYGVANRIDFVTGDFMQLAPSLK 127


>AT1G30550.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr1:10820838-10823641 REVERSE LENGTH=455
          Length = 455

 Score =  149 bits (376), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 64/109 (58%), Positives = 84/109 (77%)

Query: 401 IGKYWCQRYILFSRFDDGVKMDEEGWFSVTPEAVARYQSIRCASSTIIDCFAGVGGNAIQ 460
           I KYW QRY LFSR+D G++MDEEGW+SVTPE +A  Q+ R     +IDCF+GVGGN IQ
Sbjct: 253 ITKYWIQRYDLFSRYDQGIEMDEEGWYSVTPEEIAIKQAQRYRGKVVIDCFSGVGGNTIQ 312

Query: 461 FTQRCGHVIAIDIDPLKIDYARHNASIYGVDDQIEFIIGDFFLLAPKLK 509
           F + C  V+AIDIDP+K++ A +NA +YGV ++++F+IGDF  LAP LK
Sbjct: 313 FAKVCSSVVAIDIDPVKVELAMNNAMVYGVANRVDFVIGDFIQLAPSLK 361



 Score =  124 bits (310), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 74/109 (67%), Gaps = 14/109 (12%)

Query: 401 IGKYWCQRYILFSRFDDGVKMDEEGWFSVTPEAVARYQSIRCASSTIIDCFAGVGGNAIQ 460
           I +YW QRY LFS++D G++MDEEGW+SVTPE +A  Q+ RC    +IDCF+GVG     
Sbjct: 19  ISRYWIQRYDLFSKYDQGIEMDEEGWYSVTPEEIAIKQAERCRGKVVIDCFSGVG----- 73

Query: 461 FTQRCGHVIAIDIDPLKIDYARHNASIYGVDDQIEFIIGDFFLLAPKLK 509
                    AIDIDP+KI  A +NA +YGV ++I+F+ GDF  LAP LK
Sbjct: 74  ---------AIDIDPMKIALAMNNAKVYGVANRIDFVTGDFMQLAPSLK 113