Miyakogusa Predicted Gene
- Lj0g3v0352849.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0352849.1 CUFF.24281.1
(124 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G24800.1 | Symbols: PRT1 | proteolysis 1 | chr3:9055653-90577... 101 1e-22
>AT3G24800.1 | Symbols: PRT1 | proteolysis 1 | chr3:9055653-9057795
FORWARD LENGTH=410
Length = 410
Score = 101 bits (251), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 50/60 (83%)
Query: 1 MGVGCDFCGMYPITGDRYRCADCKEKIGFDLCSYCYKTRSKLPGRFNQQHTPEHKFQLVQ 60
G GCD CG+YPI GDRYRC DCKE+IG+DLC CY+T SK+PGRFNQQHTP+H+ +L +
Sbjct: 307 FGAGCDSCGVYPIIGDRYRCKDCKEEIGYDLCKDCYETPSKVPGRFNQQHTPDHRLELAR 366