Miyakogusa Predicted Gene

Lj0g3v0352709.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0352709.1 Non Chatacterized Hit- tr|I1KSY7|I1KSY7_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,82.52,0,DUF3550,Protein of unknown function DUF3550/UPF0682;
seg,NULL; UNKNOWN PROTEIN,NULL; FAMILY NOT NAME,CUFF.24282.1
         (350 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G40050.1 | Symbols:  | Protein of unknown function (DUF3550/U...   427   e-120
AT3G03570.1 | Symbols:  | Protein of unknown function (DUF3550/U...   311   5e-85

>AT4G40050.1 | Symbols:  | Protein of unknown function
           (DUF3550/UPF0682) | chr4:18561206-18563727 REVERSE
           LENGTH=599
          Length = 599

 Score =  427 bits (1098), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 212/348 (60%), Positives = 261/348 (75%), Gaps = 6/348 (1%)

Query: 1   MRTSDSRFLVEAYVFYEAILSRRYFEGSEASAKDLVVRSKELRFYARFLLVSLILNRAEM 60
           MRTS++RFL+EA+VFYEAIL R YF+  EA  KDL  R KELRFYARFLLVSLI++R +M
Sbjct: 85  MRTSEARFLLEAFVFYEAILKRSYFD--EAQGKDLGARFKELRFYARFLLVSLIVDRKQM 142

Query: 61  VNHLRDRFVALVDDCKSNFRETNFKEWKQVVQEIVRFTKVDKGFG-LRPLRYCATFDSHK 119
           + HL D+   LVD   SNFRETNFKEW+ VVQEI RF + D     LRPLRYCA  DS+ 
Sbjct: 143 LLHLADKLRLLVDHSISNFRETNFKEWRLVVQEITRFIESDTNLTYLRPLRYCAMLDSYP 202

Query: 120 ASFPYVARFHAKRVLKFHDALLTSYHRNEVKFAELTLDIYRMIQCLEWEPSGSFYQKHTA 179
           AS  Y+ARFHAK++ KF DALL SYHRNEVK+AE+TLD YRM+QCLEWEPSGSFYQK   
Sbjct: 203 ASQTYLARFHAKKLFKFRDALLASYHRNEVKYAEVTLDTYRMMQCLEWEPSGSFYQKKPV 262

Query: 180 KPHENGDSIDHSATSAIIDMNLAADMTDPTIPPNPRKATLYRPSVTHVIAVMATICEELP 239
           +  ENG  +DH+ TS +IDMNLAADM DP++PPNPRKA LYRP+V+H++AV+A IC+EL 
Sbjct: 263 EAKENGFVVDHTLTSGLIDMNLAADMADPSLPPNPRKAILYRPTVSHLLAVLAMICDELS 322

Query: 240 PDSVVLVYLSASGKAGLNNVXX-XXXXXXXXXXRHKVFSQSSQQMNSGTTESQNNGQ-RE 297
           P++V+L+YLSASG     NV             + K+ +++SQ+  S  +E  +NG+   
Sbjct: 323 PETVMLLYLSASGGPARENVAQPENSVGSSRTSKSKLLARASQEQKSYKSEPHSNGKLMS 382

Query: 298 MICHDSCLWFGPK-GNSGLNNLYPGDLIPFTRKPLFLIIDSDNSHAFK 344
              +++ LW GP+ G+SG NNLYPGDLIPFTRKPLFLIIDSD S AFK
Sbjct: 383 AEYYENHLWLGPRGGSSGSNNLYPGDLIPFTRKPLFLIIDSDTSRAFK 430


>AT3G03570.1 | Symbols:  | Protein of unknown function
           (DUF3550/UPF0682) | chr3:857013-860105 FORWARD
           LENGTH=607
          Length = 607

 Score =  311 bits (797), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 172/355 (48%), Positives = 225/355 (63%), Gaps = 26/355 (7%)

Query: 1   MRTSDSRFLVEAYVFYEAILSRRYFEGSEASAKDLVVRSKELRFYARFLLVSLILNRAEM 60
           MRTSD+ +L E+YVFYEAIL+R YF+  +   +DL + +K+LRF ARFL+V L+L R EM
Sbjct: 93  MRTSDAGYLSESYVFYEAILTREYFK--DGLFQDLNIANKQLRFLARFLMVCLVLGRREM 150

Query: 61  VNHLRDRFVALVDDCKSNFRETNFKEWKQVVQEIVRFTKVDKGF-GLRPLRYCATFDSH- 118
           V+ L D+F  L+D+CK  F+ET+FKEWK V QEIVRF K D  F  +RPLRY    D + 
Sbjct: 151 VHQLVDQFKRLIDECKRTFQETDFKEWKVVAQEIVRFLKSDTAFMNIRPLRYSLVLDPNL 210

Query: 119 KASFPYVARFHAKRVLKFHDALLTSYHRNEVKFAELTLDIYRMIQCLEWEPSGSFYQKHT 178
            A  P      A R L+  DA+L+SY+ NEVK++ELTLD +RM+QCLEWEPSGS YQ   
Sbjct: 211 DAGTP-----RASRSLRLTDAILSSYYCNEVKYSELTLDSFRMLQCLEWEPSGSLYQSTG 265

Query: 179 AKPHENGDSIDHSATSAIIDMNLAADMTDPTIPPNPRKATLYRPSVTHVIAVMATICEEL 238
           AK  +N       A   +  +N +  M DPT+PPNPRKA LYRPS+TH +AV+ATICEEL
Sbjct: 266 AKMGQN-------APVGVARIN-SQSMNDPTLPPNPRKAVLYRPSITHFLAVLATICEEL 317

Query: 239 PPDSVVLVYLSASGKAGL---NNVXXXXXXXXXXXXRHKVFSQSSQQMNSGTTESQNNGQ 295
           P   ++L+YLSASGK G    + +                 S + +Q    + +   +GQ
Sbjct: 318 PSHGILLLYLSASGKIGQISSSPLSARSATSVEENILRDFESHTIKQETEPSLQITPSGQ 377

Query: 296 R-EMICHDSC-----LWFGPKGNSGLNNLYPGDLIPFTRKPLFLIIDSDNSHAFK 344
               I  D+      L FG  G +G + +YP DL+PFTRKPLF+IIDSD+S  FK
Sbjct: 378 SLRQISEDAVSTPCGLSFGSHGLTGSSYIYPSDLVPFTRKPLFIIIDSDSSTVFK 432