Miyakogusa Predicted Gene
- Lj0g3v0352099.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0352099.1 Non Chatacterized Hit- tr|I1MVF6|I1MVF6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24103
PE,68.25,7e-19,ZINC_FINGER_C2H2_1,Zinc finger, C2H2; C2H2 and C2HC
zinc fingers,NULL; zinc finger,Zinc finger, C2H2,CUFF.24212.1
(280 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G06070.1 | Symbols: RBE, RAB | C2H2 and C2HC zinc fingers sup... 111 4e-25
AT2G37740.1 | Symbols: ATZFP10, ZFP10 | zinc-finger protein 10 |... 100 1e-21
AT4G17810.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily... 86 3e-17
AT3G23130.1 | Symbols: SUP, FON1, FLO10 | C2H2 and C2HC zinc fin... 84 1e-16
AT2G42410.1 | Symbols: ZFP11, ATZFP11 | zinc finger protein 11 |... 78 7e-15
AT3G09290.1 | Symbols: TAC1 | telomerase activator1 | chr3:28561... 67 1e-11
AT3G53820.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily... 59 5e-09
AT5G43540.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily... 57 1e-08
AT1G24625.1 | Symbols: ZFP7 | zinc finger protein 7 | chr1:87260... 52 4e-07
AT1G80730.1 | Symbols: ZFP1, ATZFP1 | zinc-finger protein 1 | ch... 51 8e-07
AT3G23140.1 | Symbols: URO | C2H2 and C2HC zinc fingers superfam... 50 2e-06
AT5G01860.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily... 49 3e-06
>AT5G06070.1 | Symbols: RBE, RAB | C2H2 and C2HC zinc fingers
superfamily protein | chr5:1828426-1829106 REVERSE
LENGTH=226
Length = 226
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 108/226 (47%), Gaps = 38/226 (16%)
Query: 45 EERAFAEDAARVLCTGSMWPPRSYSCTFCKREFRSAQALGGHMNIHRRDRARLKQNLISP 104
EERAFA G MWPPRSYSC+FC REF+SAQALGGHMN+HRRDRARLKQ +SP
Sbjct: 32 EERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSP 91
Query: 105 XXXXXXXXXXXXKNNDFKSSLVNHFPPEIEKLCCLSPCSVPATTITTSARLSVPSSIILE 164
SS PPE ++ + + + P+ E
Sbjct: 92 ------------------SSTDQATPPECDRQQQVLDV---GSKVLVQEETRKPNGTKRE 130
Query: 165 QKIGCPTSEPEGLVNAKEDNFIHVETNLSVGLTSTMFGQKSPSFPCGDRGIISCKRLKST 224
C + E + E + V+T+LSVGL ST F + G S KR K+
Sbjct: 131 ISDVCNNNVLESSMKRYEHDNGEVKTDLSVGLLSTEFDPRKKQLINGSSS--SWKRAKTD 188
Query: 225 NNISSSLPIFLKPCSNDRGLMMQPAEIVLGLNHHGMEDLDLELRLG 270
S P+ L GL++ +EI HH E+LDLELRLG
Sbjct: 189 ---VSRFPMML-------GLVIGISEIN---GHH--EELDLELRLG 219
>AT2G37740.1 | Symbols: ATZFP10, ZFP10 | zinc-finger protein 10 |
chr2:15827706-15828620 REVERSE LENGTH=304
Length = 304
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 49/56 (87%), Gaps = 4/56 (7%)
Query: 44 WEERAFAEDAARVLCTGSMWPPRSYSCTFCKREFRSAQALGGHMNIHRRDRARLKQ 99
WEE AFAED A GS+WPPRSY+C+FC+REF+SAQALGGHMN+HRRDRARLKQ
Sbjct: 19 WEELAFAEDDA----AGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQ 70
>AT4G17810.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily
protein | chr4:9906918-9907532 FORWARD LENGTH=204
Length = 204
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 44 WEERAFAEDAARVLCTGSMWPPRSYSCTFCKREFRSAQALGGHMNIHRRDRA 95
WE +AF +D + +G+ WPPRSY+C FC+REFRSAQALGGHMN+HRRDRA
Sbjct: 23 WEVKAFEQDTKGNI-SGTTWPPRSYTCNFCRREFRSAQALGGHMNVHRRDRA 73
>AT3G23130.1 | Symbols: SUP, FON1, FLO10 | C2H2 and C2HC zinc
fingers superfamily protein | chr3:8242504-8243118
FORWARD LENGTH=204
Length = 204
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 90/214 (42%), Gaps = 53/214 (24%)
Query: 60 GSMWPPRSYSCTFCKREFRSAQALGGHMNIHRRDRARLKQNLISPXXXXXXXXXXXXKNN 119
G WPPRSY+C+FCKREFRSAQALGGHMN+HRRDRARL+ L N
Sbjct: 39 GFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR--LQQSPSSSSTPSPPYPNPN 96
Query: 120 DFKSSLVNHFPPEIEKLC---CLSPCSVPATTITTSARLSVPSSIILEQKIGCPTSEPEG 176
S++ N PP L LSP S P LS S E C T +
Sbjct: 97 YSYSTMANSPPPHHSPLTLFPTLSPPSSPRYRAGLIRSLSPKSKHTPEN--ACKTKKSSL 154
Query: 177 LVNAKEDNFIHVETNLSVGLTSTMFGQKSPSFPCGDRGIISCKRLKSTNNISSSLPIFLK 236
LV A E +T F K +CK L++ IS
Sbjct: 155 LVEAGE---------------ATRFTSKD-----------ACKILRNDEIIS-------- 180
Query: 237 PCSNDRGLMMQPAEIVLGLNHHGMEDLDLELRLG 270
E+ +GL + +DLDLELRLG
Sbjct: 181 ------------LELEIGLINESEQDLDLELRLG 202
>AT2G42410.1 | Symbols: ZFP11, ATZFP11 | zinc finger protein 11 |
chr2:17658150-17658794 FORWARD LENGTH=214
Length = 214
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 37/37 (100%)
Query: 63 WPPRSYSCTFCKREFRSAQALGGHMNIHRRDRARLKQ 99
WPP++Y+C+FC+REFRSAQALGGHMN+HRRDRA+L+Q
Sbjct: 44 WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQ 80
>AT3G09290.1 | Symbols: TAC1 | telomerase activator1 |
chr3:2856141-2856659 FORWARD LENGTH=172
Length = 172
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 34/42 (80%)
Query: 61 SMWPPRSYSCTFCKREFRSAQALGGHMNIHRRDRARLKQNLI 102
S+ RSY C+FC R F +AQALGGHMNIHRRDRA+L+Q L+
Sbjct: 28 SLNQSRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQKLM 69
>AT3G53820.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily
protein | chr3:19938706-19939134 FORWARD LENGTH=142
Length = 142
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 29/34 (85%)
Query: 66 RSYSCTFCKREFRSAQALGGHMNIHRRDRARLKQ 99
R Y C FC+R F +AQALGGHMNIHR+DRA+L+Q
Sbjct: 19 RPYICEFCERGFSNAQALGGHMNIHRKDRAKLRQ 52
>AT5G43540.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily
protein | chr5:17496993-17497406 FORWARD LENGTH=137
Length = 137
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 24/27 (88%)
Query: 68 YSCTFCKREFRSAQALGGHMNIHRRDR 94
Y CTFCKR F +AQALGGHMNIHRRDR
Sbjct: 35 YECTFCKRGFTNAQALGGHMNIHRRDR 61
>AT1G24625.1 | Symbols: ZFP7 | zinc finger protein 7 |
chr1:8726009-8726638 REVERSE LENGTH=209
Length = 209
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 49 FAEDAARVLCTGSMWPPRSYSCTFCKREFRSAQALGGHMNIHRRDRARLKQNL 101
F +D C + PR +SC +C+R+F S+QALGGH N H+R+R K+ +
Sbjct: 43 FNDDTKSTKCEAN---PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAM 92
>AT1G80730.1 | Symbols: ZFP1, ATZFP1 | zinc-finger protein 1 |
chr1:30339493-30340179 REVERSE LENGTH=228
Length = 228
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 62 MWPPRSYSCTFCKREFRSAQALGGHMNIHRRDRARLKQ 99
+ PR +SC +C+R+F S+QALGGH N H+R+R K+
Sbjct: 62 LADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 99
>AT3G23140.1 | Symbols: URO | C2H2 and C2HC zinc fingers
superfamily protein | chr3:8250579-8251097 FORWARD
LENGTH=172
Length = 172
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 59 TGSMWPPRSYSCTFCKREFRSAQALGGHMNIHRRDRARL 97
+GS R+Y C CKR F + QALGGH NIHRR+R R
Sbjct: 12 SGSGENRRTYDCDICKRGFTNPQALGGHNNIHRRERERY 50
>AT5G01860.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily
protein | chr5:335630-336277 FORWARD LENGTH=215
Length = 215
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 28/34 (82%)
Query: 66 RSYSCTFCKREFRSAQALGGHMNIHRRDRARLKQ 99
R ++CTFCK+EF ++QALGGH N H+++R+ K+
Sbjct: 65 RVFACTFCKKEFSTSQALGGHQNAHKQERSLAKR 98