Miyakogusa Predicted Gene

Lj0g3v0350939.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0350939.2 Non Chatacterized Hit- tr|D8STA2|D8STA2_SELML
Putative uncharacterized protein OS=Selaginella
moelle,25.25,0.005,coiled-coil,NULL,CUFF.24113.2
         (242 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G26190.1 | Symbols:  | Phosphoribulokinase / Uridine kinase f...   205   2e-53
AT1G73980.1 | Symbols:  | Phosphoribulokinase / Uridine kinase f...   152   3e-37

>AT1G26190.1 | Symbols:  | Phosphoribulokinase / Uridine kinase
           family | chr1:9057285-9060433 REVERSE LENGTH=674
          Length = 674

 Score =  205 bits (522), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/257 (46%), Positives = 174/257 (67%), Gaps = 20/257 (7%)

Query: 1   MPDDLRTKLRLDEDLMSS--PKEALFKASTNALHVRHRRIRSDMSQSCTNQRDKNQAKVT 58
           +PDDL+ KL LDEDL+SS  PKEAL +AS + + +R++ ++  MS S + QRDKN +K+ 
Sbjct: 420 LPDDLKNKLSLDEDLVSSSSPKEALLRASADRVAMRNKNLKRGMSHSYSTQRDKNLSKLA 479

Query: 59  GYVSNNRVLHERDNSDSVTNLANQGAITILSEQISSLNDRMDEFTNQIQELNSKLTIKKN 118
           GY S++R   ER N DS    AN+G +T+LSEQISSLN+RMDEFT++I+ELNSKL+  KN
Sbjct: 480 GYSSSDRRYEER-NHDSP---ANEGFMTLLSEQISSLNERMDEFTSRIEELNSKLSCNKN 535

Query: 119 CASQQNIVLQAEACNGSAPTSHSITSWNNRSLTRPIIPNSSSPTQFAKETPLADEIAM-- 176
             +QQ++ +Q E CNGSAPTS+ I+  +N  LT  I+P+SSS +Q AK++PL +EI+   
Sbjct: 536 SPTQQSLSIQTEVCNGSAPTSYFISGLDNGCLTNSIMPHSSSSSQLAKDSPLMEEISTIS 595

Query: 177 -GQRQIIHQLDNLNNLLCGNTGDKPHQTRT--------NRKSVAPYSDSTGPN---LILA 224
            GQRQ++HQLDNL NL+  ++ ++    RT         R S + +  +   N   L+L 
Sbjct: 596 RGQRQVMHQLDNLCNLMRESSAERSRLARTGSSNSGNRGRSSKSSFLSNVESNKLPLVLT 655

Query: 225 VAVGCLGIFLVKGLLTR 241
           VA+  +GI ++K  + +
Sbjct: 656 VAICSIGIIVIKSYINK 672


>AT1G73980.1 | Symbols:  | Phosphoribulokinase / Uridine kinase
           family | chr1:27820292-27823527 REVERSE LENGTH=643
          Length = 643

 Score =  152 bits (383), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/242 (41%), Positives = 143/242 (59%), Gaps = 33/242 (13%)

Query: 1   MPDDLRTKLRLDEDLMSSPKEALFKASTNALHVRHRRIRSDMSQSCTNQRDKNQAKVTGY 60
           +PDDL+TKL LD+D +SSPKEAL +AS ++   R + +   +S+S TN R K    +T  
Sbjct: 420 LPDDLKTKLSLDDDTVSSPKEALSRASVDS---RMKYLHGGVSKSYTNPRHKVLPNLTRL 476

Query: 61  VSNNRVLHERDNSDSVTNLANQGAITILSEQISSLNDRMDEFTNQIQELNSKLTIK-KNC 119
             NNR+L  R  +   T L NQG IT LS+QIS+LN+RMDEFT++I+ELNSK+  +    
Sbjct: 477 AVNNRMLDARAPASPAT-LPNQGFITQLSDQISTLNERMDEFTSRIEELNSKIPNRIAPS 535

Query: 120 ASQQNIVLQAEACNGSAPTSHSITSWNNRSLTRPIIPNSSSPTQFAKETPLADEIAM--- 176
            SQ N+ L  E  NGS                  ++  S+S +Q  +E+PL +E+ +   
Sbjct: 536 GSQHNLALPIENGNGS------------------VLSFSASASQLVRESPLMEEVVLVAR 577

Query: 177 GQRQIIHQLDNLNNLLCGNTGDKPH-----QTRTNRKSVAPYSDSTGPNLILAVAVGCLG 231
           GQRQI+HQ+D L+NLL    G+K        +RTN  +      ST P ++L +A+GC+G
Sbjct: 578 GQRQIMHQMDTLSNLLREYVGEKTRIERLDSSRTN-STTQNLESSTVP-ILLGLAIGCVG 635

Query: 232 IF 233
           IF
Sbjct: 636 IF 637