Miyakogusa Predicted Gene

Lj0g3v0350809.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0350809.1 Non Chatacterized Hit- tr|B8B2Y7|B8B2Y7_ORYSI
Putative uncharacterized protein OS=Oryza sativa subsp,55.26,2e-18,no
description,NULL; SUBFAMILY NOT NAMED,NULL;
HEXAPRENYLDIHYDROXYBENZOATE METHYLTRANSFERASE,Ubiquin,CUFF.24102.1
         (81 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G30920.1 | Symbols: ATCOQ3, EMB3002, COQ3 | coenzyme Q 3 | ch...   137   1e-33

>AT2G30920.1 | Symbols: ATCOQ3, EMB3002, COQ3 | coenzyme Q 3 |
           chr2:13157409-13159824 REVERSE LENGTH=322
          Length = 322

 Score =  137 bits (346), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 59/80 (73%), Positives = 73/80 (91%)

Query: 1   MRAYATAIVAAEYILRWLPRGTHEWSSFLTPEELVLILQRAGINVEEMAGFVYNPLTGRW 60
           MRAYA+ IV AEYILRWLP+GTH+WSSF+TPEE+ +ILQRA ++V+E+AGFVYNP+TGRW
Sbjct: 240 MRAYASTIVGAEYILRWLPKGTHQWSSFVTPEEMSMILQRASVDVKEIAGFVYNPITGRW 299

Query: 61  SLSDDISVNFIAFGTKTKSI 80
            LSDDISVN+IA+GTK K +
Sbjct: 300 LLSDDISVNYIAYGTKRKDL 319