Miyakogusa Predicted Gene

Lj0g3v0350409.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0350409.1 tr|A7S6W7|A7S6W7_NEMVE Predicted protein
(Fragment) OS=Nematostella vectensis GN=v1g106861 PE=4
SV=1,32.89,0.00000000005,Found in ATP-dependent protease La
(LON),Peptidase S16, lon N-terminal; seg,NULL; ATP-DEPENDENT
PROT,CUFF.24079.1
         (543 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G25740.1 | Symbols:  | ATP-dependent protease La (LON) domain...   528   e-150

>AT2G25740.1 | Symbols:  | ATP-dependent protease La (LON) domain
           protein | chr2:10980175-10983632 FORWARD LENGTH=547
          Length = 547

 Score =  528 bits (1360), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 267/494 (54%), Positives = 347/494 (70%), Gaps = 34/494 (6%)

Query: 68  FNTSVASLHTYLGDVEDTRHRAAFFDGGTVLNVPLFCLPGVVLFPGATLPLRVIEAHFVA 127
           FN ++ASLH YLG+VEDT++R +F DGGTVL +PLF L GVVLFP ATLPLR+I+  F+A
Sbjct: 67  FNPALASLHMYLGEVEDTQNRVSFVDGGTVLKIPLFYLEGVVLFPEATLPLRIIQPSFLA 126

Query: 128 AIDRALSQVDVPLTIGVIRIHRDTPNRRMKSATIGTTAEIRQYGRLENGSLNVVTRGQQR 187
           A++RAL+Q + P TIGVIR++R+    + K A++GTTAEIRQY RL +GS NV+TRGQQR
Sbjct: 127 AVERALNQANAPSTIGVIRVYRE--GAQFKYASVGTTAEIRQYRRLGDGSFNVITRGQQR 184

Query: 188 FRLRRCWVDVEGVPYGEVQIIEEDVPLRTPRDAFDQVPSSSNMSCSH----AVLHTPSSK 243
           FRL+  W DVEG   GEVQI++EDVPLRTPRDAF ++   S +   +    A L TP   
Sbjct: 185 FRLKHRWTDVEGFTCGEVQIVDEDVPLRTPRDAFGKLVPLSKLRGRYPLGTASLSTP--- 241

Query: 244 HSHVKMEELKNGESDSEANSDGSFERELSQMERKIHLSVIGSSHVRDMM---DESASSSD 300
                   L++ ++ SEANS+ SFE  LS  E+++H SV+ S          D+  S+S 
Sbjct: 242 --------LRDMDAQSEANSEESFESALSPSEKRLHYSVVDSIFCNSTSSDDDQVVSTST 293

Query: 301 VKLMNKSDQEIRS-----------NQD--LSIGNCSTSGKQSSKEELNRCYKNVYNRPSH 347
           V+    +   +RS           N+D   +IG    S ++  K+     ++   +    
Sbjct: 294 VQSSGSNPYSLRSIGCLASSHDNENEDEQSAIGKTPVSQEKYQKQNRLASFRQNTDLSRF 353

Query: 348 KIS-KTFLPHWVYRMYDSYWLAQRAADMWKRIVGVPSMDSLIKTPDILSFHIASKIPMSE 406
           +++ + F P W YRM+DSY+LAQRA D+WK+IVGVP+M++ +  PDILSF IASKIP+SE
Sbjct: 354 RMTPRAFWPFWAYRMFDSYYLAQRAVDLWKQIVGVPNMEAFVNKPDILSFSIASKIPVSE 413

Query: 407 STRQELLEIDGIAYRLRREIELLESIDVIRCKSCLTVIAKRSDMLVMSSEGPLGAYVNPG 466
           S RQELLE+DG++YRL+REIELLES D +RC  C TVIA+R DMLVMS+EGPLGAYVNP 
Sbjct: 414 SIRQELLELDGVSYRLQREIELLESFDRVRCIHCQTVIARRKDMLVMSNEGPLGAYVNPH 473

Query: 467 GYVHEIMTLYKANGLALLGPPVTEYSWFPGYAWTIATCATCKIQMGWLFTATNKKMRPNS 526
           GYVHEIMT YKAN +AL G PV + SWFPGYAWTIA CATC+ Q+GW FTATNKK++P+S
Sbjct: 474 GYVHEIMTFYKANDIALRGRPVKKDSWFPGYAWTIANCATCETQLGWHFTATNKKLKPSS 533

Query: 527 FWGIRSCQVAEQKR 540
           FW +R  QVA+  R
Sbjct: 534 FWAVRGSQVADDMR 547