Miyakogusa Predicted Gene
- Lj0g3v0350309.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0350309.1 tr|G7L767|G7L767_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_8g0,76.37,0,seg,NULL; PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
rep,CUFF.24063.1
(491 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 3e-39
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 4e-39
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 7e-35
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 140 2e-33
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 6e-28
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 6e-27
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 6e-27
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 4e-26
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 6e-25
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 7e-25
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 110 3e-24
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 6e-24
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 6e-24
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 3e-23
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 5e-23
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 105 8e-23
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 104 1e-22
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 3e-22
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 103 3e-22
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 4e-22
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 102 9e-22
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 101 1e-21
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 101 1e-21
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 6e-21
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 9e-21
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 1e-20
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 96 5e-20
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 7e-20
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 4e-19
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 4e-19
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 91 2e-18
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 9e-18
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 4e-17
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 6e-17
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 84 3e-16
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 3e-16
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 4e-16
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 80 4e-15
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 80 4e-15
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 79 7e-15
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 78 1e-14
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 77 3e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 5e-14
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 71 2e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 69 1e-11
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 6e-11
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 65 1e-10
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 63 6e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 62 7e-10
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 59 9e-09
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 9e-09
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 57 2e-08
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 57 3e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 56 7e-08
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 54 2e-07
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 54 4e-07
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 7e-07
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 50 3e-06
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 50 4e-06
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 49 9e-06
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 49 9e-06
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 217/434 (50%), Gaps = 6/434 (1%)
Query: 41 NVSPVARTLCNLLTRTSPPEIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWA-- 98
+V+ VA+ + +L + +++AL SG+ S + V +VL N +FF+W+
Sbjct: 67 DVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEK 126
Query: 99 GRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNE 158
R +HS A+++M++ K + MWD I +M+++ +L + TF + Y A + +E
Sbjct: 127 QRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDE 186
Query: 159 AIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLE 218
AI +F+VM+ + + ++VA N LLS++C +N A E FE ++ + PD +++ILLE
Sbjct: 187 AIYAFNVMEKYDLPPNLVAFNGLLSALCKSKN-VRKAQEVFENMRDRFTPDSKTYSILLE 245
Query: 219 GWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDC 278
GW KE N KA+ F EM+ +++ Y + L +A +++E L ++ M C
Sbjct: 246 GWGKEPNLPKAREVFREMID--AGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSIC 303
Query: 279 FPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFR 338
P ++ + + EN A+ + M G+ ++ ++N++IG C + N +R
Sbjct: 304 KPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYR 363
Query: 339 LLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLF 398
+L EM G P+S + N+I + L+ + E F +M+K P + I M
Sbjct: 364 VLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFC 422
Query: 399 DCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYES 458
+ + E A ++W YM + V P + + L+ G+C + E+M++ I
Sbjct: 423 EKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGV 482
Query: 459 TMNKLKDAFYTEGR 472
T +L+ E R
Sbjct: 483 TFGRLRQLLIKEER 496
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 207/444 (46%), Gaps = 9/444 (2%)
Query: 35 THLDTPNVSPVARTLCNLLTRTSPPEIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKF 94
T + + S A +C +LT+ + ++ET L + + S + EVLK N A+
Sbjct: 55 TQVSANDASQDAERICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSV 114
Query: 95 FRWAGRLQ--KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCV 152
F+WA + KH+ +N +++ LGK + F +W + MK + +L+ TF + Y
Sbjct: 115 FKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYAR 174
Query: 153 AGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGD 211
A + EAI +F M+ G + + N +L ++ N A + F+++K K PD
Sbjct: 175 ARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRN-VGDAQKVFDKMKKKRFEPDIK 233
Query: 212 SFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLK 271
S+ ILLEGW +E N + EM + + +V+AY + +A + EE +RF
Sbjct: 234 SYTILLEGWGQELNLLRVDEVNREM--KDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFN 291
Query: 272 VMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNG 331
M+ +C P F ++ E A+ ++ + G YNA++G C +
Sbjct: 292 EMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQ 351
Query: 332 EVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCA 391
+++A++ +DEM L G P++ TY++I L+R ++ +E + M PT S
Sbjct: 352 RMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYE 408
Query: 392 AAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDR 451
+ M + + + A +IW M V P ++L+ +C ++ E + +MLD
Sbjct: 409 IMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDV 468
Query: 452 RIIIYESTMNKLKDAFYTEGRSRK 475
I ++LK EGR K
Sbjct: 469 GIRPPGHMFSRLKQTLLDEGRKDK 492
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 209/448 (46%), Gaps = 11/448 (2%)
Query: 33 FPTHLDTPNVSPVARTLCNLLT--RTSPPEIETALTSSGIHPSDDCVREVLKLSYNYPHS 90
F T L P + + +L+ R ++E L + S + V +VLK N
Sbjct: 25 FSTLLHDPPSPDLVNEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFP 84
Query: 91 AVKFFRWAGRLQK--HSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTL--RTFVSA 146
A +FF WA R+ HS +++++V++LG ++ F +WD + ++ + + F
Sbjct: 85 AHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIV 144
Query: 147 FQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-K 205
F++Y A +EA +F+ M GI+ V ++ LL S+C ++ + A EFF + KG
Sbjct: 145 FRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLC-DKKHVNHAQEFFGKAKGFG 203
Query: 206 IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEE 265
I P +++IL+ GW + +A+ A+ F EM+ R +++AY+A L L ++ ++
Sbjct: 204 IVPSAKTYSILVRGWARIRDASGARKVFDEMLERN--CVVDLLAYNALLDALCKSGDVDG 261
Query: 266 VLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIG 325
+ + M + P F + + D A + D M ++PN+ +N +I
Sbjct: 262 GYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIK 321
Query: 326 LQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPP 385
C N +VD+A+ LLDEM+ GA PD+ TYN I + +V + M + + P
Sbjct: 322 TLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLP 381
Query: 386 TSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGIC-SLSRFSEVRRH 444
+ +L + A EIW M E P + ++ G+ + E R+
Sbjct: 382 DRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRY 441
Query: 445 AEDMLDRRIIIYESTMNKLKDAFYTEGR 472
E M+D I Y +T+ L++ G+
Sbjct: 442 FEMMIDEGIPPYSTTVEMLRNRLVGWGQ 469
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 197/428 (46%), Gaps = 7/428 (1%)
Query: 61 IETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGRLQ--KHSPHAWNLMVDLLGK 118
+E L + S D + EVL+ + A +FF WA Q H+ +N M+ +L K
Sbjct: 148 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAK 207
Query: 119 NELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAV 178
F+ M + M +G+LT+ TF A +++ A +A+ F++M + + V +
Sbjct: 208 TRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETI 267
Query: 179 NSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVI 238
N LL S+ A F+++K + P+ ++ +LL GW + N +A + +M+
Sbjct: 268 NCLLDSLG-RAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 326
Query: 239 RVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDA 298
K +++A++ L LLR+ + + ++ VMK P ++ +T + F K++
Sbjct: 327 H--GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 384
Query: 299 AHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMI 358
AI +D MV G+ P+ +Y +I ++D + LL EM G PD TYN +
Sbjct: 385 ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 444
Query: 359 FKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHV 418
K + K + +M++NE P+ + F + E +W M++ +
Sbjct: 445 IKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGI 504
Query: 419 KPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRKDRF 478
P S L+ G+ S + E R+ E+MLD+ + NK F+ G+ + F
Sbjct: 505 CPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP--EIF 562
Query: 479 DSLFRRWK 486
+ L +R K
Sbjct: 563 EELAQRAK 570
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 196/428 (45%), Gaps = 7/428 (1%)
Query: 61 IETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGRLQ--KHSPHAWNLMVDLLGK 118
+E L + S D + EVL+ + A +FF WA Q H +N M+ +L K
Sbjct: 147 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAK 206
Query: 119 NELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAV 178
F+ M + M +G+LT+ TF A +++ A +A+ F++M + + V +
Sbjct: 207 TRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETI 266
Query: 179 NSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVI 238
N LL S+ A F+++K + P+ ++ +LL GW + N +A + +M+
Sbjct: 267 NCLLDSLG-RAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 325
Query: 239 RVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDA 298
K +++A++ L LLR+ + + ++ VMK P ++ +T + F K++
Sbjct: 326 H--GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 383
Query: 299 AHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMI 358
AI +D MV G+ P+ +Y +I ++D + LL EM G PD TYN +
Sbjct: 384 ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 443
Query: 359 FKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHV 418
K + K + +M++NE P+ + F + E +W M++ +
Sbjct: 444 IKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGI 503
Query: 419 KPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRKDRF 478
P S L+ G+ S + E R+ E+MLD+ + NK F+ G+ + F
Sbjct: 504 CPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP--EIF 561
Query: 479 DSLFRRWK 486
+ L +R K
Sbjct: 562 EELAQRAK 569
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 196/428 (45%), Gaps = 7/428 (1%)
Query: 61 IETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGRLQ--KHSPHAWNLMVDLLGK 118
+E L + S D + EVL+ + A +FF WA Q H +N M+ +L K
Sbjct: 148 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAK 207
Query: 119 NELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAV 178
F+ M + M +G+LT+ TF A +++ A +A+ F++M + + V +
Sbjct: 208 TRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETI 267
Query: 179 NSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVI 238
N LL S+ A F+++K + P+ ++ +LL GW + N +A + +M+
Sbjct: 268 NCLLDSLG-RAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 326
Query: 239 RVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDA 298
+ K +++A++ L LLR+ + + ++ VMK P ++ +T + F K++
Sbjct: 327 Q--GLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 384
Query: 299 AHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMI 358
AI +D MV G+ P+ +Y +I ++D + LL EM G PD TYN +
Sbjct: 385 ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 444
Query: 359 FKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHV 418
K + K + +M++NE P+ + F + E +W M++ +
Sbjct: 445 IKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGI 504
Query: 419 KPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRKDRF 478
P S L+ G+ + E R+ E+MLD+ + NK F+ G+ + F
Sbjct: 505 CPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP--EIF 562
Query: 479 DSLFRRWK 486
+ L +R K
Sbjct: 563 EELAQRAK 570
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 180/387 (46%), Gaps = 12/387 (3%)
Query: 89 HSAVKFFRWAGRLQKH---SPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGV-LTLRTFV 144
H ++ FF WA + SPH +N M+DL GK FD W I MK V +++ TF
Sbjct: 131 HQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFT 190
Query: 145 SAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG 204
+ Y AG +EA+ F+ M+++G D +A + ++S++ + + S A FF+ +K
Sbjct: 191 ILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLS-RKRRASEAQSFFDSLKD 249
Query: 205 KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIE 264
+ PD + L+ GW + G ++A+ F EM ++ + NV Y + L R QI
Sbjct: 250 RFEPDVIVYTNLVRGWCRAGEISEAEKVFKEM--KLAGIEPNVYTYSIVIDALCRCGQIS 307
Query: 265 EVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMI 324
M D C P F + V VK + +++ M G P+ I YN +I
Sbjct: 308 RAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLI 367
Query: 325 GLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWP 384
C + ++NA ++L+ M+ ++ T+N IF+ + + + V +++M++ +
Sbjct: 368 EAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCE 427
Query: 385 PTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRH 444
P + + M + ++ M + V+P + L+ C + ++ +
Sbjct: 428 PNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKL 487
Query: 445 AEDMLDRRII-----IYESTMNKLKDA 466
++M++ + + +YE + +L+ A
Sbjct: 488 FKEMVEEKCLTPSLSLYEMVLAQLRRA 514
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 174/390 (44%), Gaps = 15/390 (3%)
Query: 65 LTSSGIHP-SDDCVREVLKLSYNYPHSAVKFFRWAGRLQK---HSPHAWNLMVDLLGKNE 120
L S+ P + + V VLK +N+ A++FF + + H +++L +D+ +
Sbjct: 46 LLSTKTTPWTPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLH 105
Query: 121 LFDPMWDAIRSMKQEGV-LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVN 179
L +W I M+ + + +TF + Y AG+ ++A+ F M HG +D+ + N
Sbjct: 106 LHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFN 165
Query: 180 SLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIR 239
++L + C+ + A E F ++G+ + D ++ ++L GW KA EMV R
Sbjct: 166 TILD-VLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVER 224
Query: 240 VGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAA 299
N+ Y+ L RA QI F MK DC + +T + F +
Sbjct: 225 --GINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIK 282
Query: 300 HAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIF 359
A ++D M+ G++P++ YNAMI + C V+NA + +EMV G P+ TYN++
Sbjct: 283 RARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLI 342
Query: 360 KCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVK 419
+ L + E M P I +C + E A ++ M
Sbjct: 343 RGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCL 402
Query: 420 PLHESANALLIGICSLSRFSEVRRHAEDML 449
P ++ N L+ G+ VR+ +EDM+
Sbjct: 403 PNLDTYNILISGMF-------VRKRSEDMV 425
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 177/395 (44%), Gaps = 20/395 (5%)
Query: 60 EIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGRLQ--KHSPHAWNLMVDLLG 117
++E AL S + + V ++L+ +A +FF WAG + H P A+N M+D+L
Sbjct: 111 DMEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILS 170
Query: 118 ----KNELFDPMWDAIRSMKQ--EGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGI 171
KN+ F + D + MK+ + V+ + + + YC R+ + F +
Sbjct: 171 STKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYC--ERYLTHVQKFAKRKRIRV 228
Query: 172 --EKDVVAVNSLLSSIC-CEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAK 228
+ ++ A N LL ++C C + A+ ++ ++ PD ++F +L GW + + K
Sbjct: 229 KTQPEINAFNMLLDALCKCGLVKEGEAL--LRRMRHRVKPDANTFNVLFFGWCRVRDPKK 286
Query: 229 AKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEE---VLRFLKVMKDHDCFPGLKFF 285
A EM I G EN Y A + T +A ++E + F+ P K F
Sbjct: 287 AMKLLEEM-IEAGHKPEN-FTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTF 344
Query: 286 TYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVL 345
+ K + A L M++ G +P++ Y +I C +VD A++ LDEM
Sbjct: 345 ALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSN 404
Query: 346 HGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEA 405
G PD +TYN + L N+K E + MV++ P+ I+M F+ DDP+
Sbjct: 405 KGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDG 464
Query: 406 AHEIWSYMVENHVKPLHESANALLIGICSLSRFSE 440
A W+ M + E+ A++ G+ R E
Sbjct: 465 AFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKE 499
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 7/210 (3%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
T+ +A ++C AG +EA FD M G + I + A E FE
Sbjct: 305 TYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALA-KNDKAEECFEL 363
Query: 202 VKGKIA----PDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTL 257
+ I+ PD ++ ++EG +A EM + G+ + ++ Y+ FL L
Sbjct: 364 IGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNK-GYPPD-IVTYNCFLRVL 421
Query: 258 LRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNL 317
+ +E L+ M + C P ++ + + +F + +D A W M + ++
Sbjct: 422 CENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDV 481
Query: 318 IMYNAMIGLQCNNGEVDNAFRLLDEMVLHG 347
Y AMI + A LL+E+V G
Sbjct: 482 ETYCAMINGLFDCHRAKEACFLLEEVVNKG 511
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 194/428 (45%), Gaps = 14/428 (3%)
Query: 49 LCNLLTR--TSPPEIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGRLQK--H 104
+C+ L + TS ++ L+ + ++ V +VL+ N + A FF WA H
Sbjct: 105 VCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVH 164
Query: 105 SPHAWNLMVDLLGKNELFDPMWDAIRSM---KQEGVLTLRTFVSAFQSYCVAGRFNEAIM 161
S H +N MVD+LGK FD MW+ + M ++ ++TL T + +G++N+A+
Sbjct: 165 SGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVD 224
Query: 162 SFDVMD-NHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGW 220
+F M+ ++G++ D +A+NSL+ ++ +EN A E F ++ I PD +F IL+ G+
Sbjct: 225 AFLEMEKSYGVKTDTIAMNSLMDAL-VKENSIEHAHEVFLKLFDTIKPDARTFNILIHGF 283
Query: 221 EKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFP 280
K A+ +++V +V+ Y +F+ + V L+ M+++ C P
Sbjct: 284 CKARKFDDARAMMD--LMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNP 341
Query: 281 GLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLL 340
+ +T + K A A+ +++ M G +P+ Y+++I + G +A +
Sbjct: 342 NVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIF 401
Query: 341 DEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDC 400
++M G D L YN + + + + M E S N +L C
Sbjct: 402 EDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMC 461
Query: 401 DDPEAAHE---IWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYE 457
+ + +MV+N V + L+ G+C + E E+ + + ++ +
Sbjct: 462 CHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRD 521
Query: 458 STMNKLKD 465
ST L D
Sbjct: 522 STCKMLVD 529
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 168/367 (45%), Gaps = 22/367 (5%)
Query: 60 EIETALTSSGIHPSDDCVREVLK---LSYNYPHSAVKFFRWAGRLQK--HSPHAWNLMVD 114
E++ +L+SSGIH S D + VLK S+ P ++F+R+A ++ HS + + M+
Sbjct: 57 ELKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLY 116
Query: 115 LLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEK- 173
+LG+N FD +W+ + K++ R+ +S V GR + +++ K
Sbjct: 117 ILGRNRKFDQIWELLIETKRKD----RSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKR 172
Query: 174 ------DVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAA 227
D N+LL ++C E++ T A + +K + PD +F ILL GW+ A
Sbjct: 173 LVPDFFDTACFNALLRTLCQEKSMTD-ARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAE 231
Query: 228 KAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTY 287
++ K +V+ Y++ + + +IE+ + + M++ + P + +T
Sbjct: 232 AFFEE-----MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTT 286
Query: 288 ALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHG 347
+ A + M G P++ YNA I C + +A +L+DEMV G
Sbjct: 287 VIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKG 346
Query: 348 AFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAH 407
P++ TYN+ F+ L + + + M+ NE P + +C I M + + A
Sbjct: 347 LSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAM 406
Query: 408 EIWSYMV 414
+W MV
Sbjct: 407 RLWEDMV 413
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 174/398 (43%), Gaps = 12/398 (3%)
Query: 60 EIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGRLQKH--SPHAWNLMVDLLG 117
E+ L + PS++ V E+L N +A FF WAG+ Q + S ++ M+ +LG
Sbjct: 113 ELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILG 172
Query: 118 KNELFDPMWDAIRSMKQ--EGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDV 175
K FD W I M++ ++ +T + + YC +AI +F +E +
Sbjct: 173 KMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGI 232
Query: 176 VAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGW-EKEGNAAKAKTTFG 234
SLLS++C +N + F K K D SF I+L GW G+ +A+ +
Sbjct: 233 DDFQSLLSALCRYKNVSDAGHLIFCN-KDKYPFDAKSFNIVLNGWCNVIGSPREAERVWM 291
Query: 235 EMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVK 294
EM VG K +V++Y + + + + +VL+ MK P K + + K
Sbjct: 292 EMG-NVG-VKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAK 349
Query: 295 ENDAAHAIPLWDAMVA-GGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSL 353
+ + A L M GI PN++ YN++I C + + A ++ DEM+ G FP
Sbjct: 350 ASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIR 409
Query: 354 TYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYM 413
TY+ + L ++V E A+M K PT I L D + +W M
Sbjct: 410 TYHAFMRILRTGEEVFE---LLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEM 466
Query: 414 VENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDR 451
E V P S ++ G+ + E + ++M D+
Sbjct: 467 KEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDK 504
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 166/398 (41%), Gaps = 39/398 (9%)
Query: 70 IHPSDDCVREVLKLSYNYPHSAVKFFRWAGRLQ--KHSPHAWNLMVDLLGKNELFDPMWD 127
++ SD V ++L + SA+ +WA + KHS A+++ VD+LGK + +D M +
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 142
Query: 128 AIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICC 187
+ M+ + ++TL T + + AG + EA+ FD + G+EK+ ++N LL ++ C
Sbjct: 143 FVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTL-C 201
Query: 188 EENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEM----------- 236
+E + A ++K I P+ +F I + GW K +A T EM
Sbjct: 202 KEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVIS 261
Query: 237 ---VIR-------------------VGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMK 274
+IR S N + Y + +L + EE LR MK
Sbjct: 262 YTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 275 DHDCFPGLKFFTYALDVFVKENDAAHAIPLWDA-MVAGGIMPNLIMYNAMIGLQCNNGEV 333
C P F+ + + A ++ M G+ N YN+MI + C++ E
Sbjct: 322 RSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEE 381
Query: 334 DNAFRLLDEMVLHG-AFPDSLTYNMIFKCLVRNKKVRETESFFAEMV-KNEWPPTSSNCA 391
D A LL EM PD TY + + + V E EMV K+ S
Sbjct: 382 DKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYT 441
Query: 392 AAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALL 429
I L + E A+ ++ M+ + P H + LL
Sbjct: 442 FLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLL 479
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 166/398 (41%), Gaps = 39/398 (9%)
Query: 70 IHPSDDCVREVLKLSYNYPHSAVKFFRWAGRLQ--KHSPHAWNLMVDLLGKNELFDPMWD 127
++ SD V ++L + SA+ +WA + KHS A+++ VD+LGK + +D M +
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 142
Query: 128 AIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICC 187
+ M+ + ++TL T + + AG + EA+ FD + G+EK+ ++N LL ++ C
Sbjct: 143 FVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTL-C 201
Query: 188 EENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEM----------- 236
+E + A ++K I P+ +F I + GW K +A T EM
Sbjct: 202 KEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVIS 261
Query: 237 ---VIR-------------------VGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMK 274
+IR S N + Y + +L + EE LR MK
Sbjct: 262 YTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 275 DHDCFPGLKFFTYALDVFVKENDAAHAIPLWDA-MVAGGIMPNLIMYNAMIGLQCNNGEV 333
C P F+ + + A ++ M G+ N YN+MI + C++ E
Sbjct: 322 RSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEE 381
Query: 334 DNAFRLLDEMVLHG-AFPDSLTYNMIFKCLVRNKKVRETESFFAEMV-KNEWPPTSSNCA 391
D A LL EM PD TY + + + V E EMV K+ S
Sbjct: 382 DKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYT 441
Query: 392 AAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALL 429
I L + E A+ ++ M+ + P H + LL
Sbjct: 442 FLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLL 479
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 167/397 (42%), Gaps = 7/397 (1%)
Query: 59 PEIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGRLQK--HSPHAWNLMVDLL 116
P++E AL SG+ + VL + + +FF WA + + HS + MV +L
Sbjct: 98 PKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKIL 157
Query: 117 GKNELFDPMWDAIRSMKQEG--VLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKD 174
K F +W I M++E ++ FV Q + A +AI D M G E D
Sbjct: 158 SKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPD 217
Query: 175 VVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFG 234
LL ++C + A + FE+++ + + F LL GW + G +AK
Sbjct: 218 EYVFGCLLDALC-KHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLV 276
Query: 235 EMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVK 294
+M G+ + +++ Y L A ++ + L+ M+ P +T + K
Sbjct: 277 QMN-EAGF-EPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCK 334
Query: 295 ENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLT 354
+ A+ ++ M +++ Y A++ C G++D + +LD+M+ G P LT
Sbjct: 335 VDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELT 394
Query: 355 YNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMV 414
Y I + + E +M + E+ P I + + + A +W+ M
Sbjct: 395 YMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEME 454
Query: 415 ENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDR 451
EN + P ++ ++ G+ S E H ++M+ R
Sbjct: 455 ENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTR 491
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 123/328 (37%), Gaps = 47/328 (14%)
Query: 107 HAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVM 166
+ + ++D L K+ M+ + LR F S +C G+ EA M
Sbjct: 219 YVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQM 278
Query: 167 DNHGIEKDVVAVNSLLSSIC----------------------------------CEENQT 192
+ G E D+V +LLS C+ ++
Sbjct: 279 NEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRM 338
Query: 193 STAMEFFEEV-KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYD 251
AM+ F E+ + + D ++ L+ G+ K G K +M+ + E + Y
Sbjct: 339 EEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSE--LTYM 396
Query: 252 AFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAG 311
++ + EE L ++ M+ + P + + + + K + A+ LW+ M
Sbjct: 397 HIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEEN 456
Query: 312 GIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSL--TYNMIFKCLVRNKKVR 369
G+ P + + MI + G + A EMV G F S T ++ ++++KK+
Sbjct: 457 GLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKL- 515
Query: 370 ETESFFAEMVKNEWPPTSSNCAAAIAML 397
EM K+ W +S A + +L
Sbjct: 516 -------EMAKDVWSCITSKGACELNVL 536
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 138/295 (46%), Gaps = 7/295 (2%)
Query: 140 LRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFF 199
L ++ C RF A+ M G E DVV V+SL++ C + N+ A++
Sbjct: 104 LYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC-QGNRVFDAIDLV 162
Query: 200 EEVKG-KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLL 258
+++ PD + +++G K G A F M R G + + + Y++ + L
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRME-RDG-VRADAVTYNSLVAGLC 220
Query: 259 RASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLI 318
+ + + R ++ M D P + FT +DVFVKE + A+ L++ M + P++
Sbjct: 221 CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
Query: 319 MYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEM 378
YN++I C +G VD A ++LD MV G PD +TYN + ++K+V E F EM
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 379 VKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGIC 433
+ + I F P+AA EI+S M +P + + LL G+C
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLC 392
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 117/292 (40%), Gaps = 6/292 (2%)
Query: 198 FFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEM-VIRVGWSKENVMAYDAFLLT 256
F + ++ + P F+ +L K N + F M V +G ++ +Y+ +
Sbjct: 57 FCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIG---HDLYSYNIVINC 113
Query: 257 LLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPN 316
L R S+ L + M P + + ++ F + N AI L M G P+
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173
Query: 317 LIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFA 376
+++YN +I C G V++A L D M G D++TYN + L + + +
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233
Query: 377 EMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLS 436
+MV + P A I + A +++ M V P + N+L+ G+C
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 437 RFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRKDRFDSLFRRWKAR 488
R E ++ + M+ + + T N L + F R D LFR R
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS--KRVDEGTKLFREMAQR 343
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 86/209 (41%), Gaps = 5/209 (2%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
T+ S C+ GR +EA D+M G DVV N+L++ C + F E
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 202 VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRAS 261
+ + D ++ +++G+ + G A+ F M S+ N+ Y L L
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD-----SRPNIRTYSILLYGLCMNW 395
Query: 262 QIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYN 321
++E+ L + M+ + + + + K + A L+ ++ G+ P+++ Y
Sbjct: 396 RVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYT 455
Query: 322 AMIGLQCNNGEVDNAFRLLDEMVLHGAFP 350
MI C + D + L +M G P
Sbjct: 456 TMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 109/265 (41%), Gaps = 13/265 (4%)
Query: 127 DAIRSMK----QEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLL 182
DA R M+ ++ V + TF + + G+F+EA+ ++ M ++ DV NSL+
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 183 SSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIR--V 240
+ +C V PD ++ L+ G+ K + F EM R V
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Query: 241 GWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAH 300
G + + Y+ + +A + + M D P ++ ++ L
Sbjct: 347 G----DTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEK 399
Query: 301 AIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFK 360
A+ L++ M I ++ YN +I C G V++A+ L + G PD ++Y +
Sbjct: 400 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459
Query: 361 CLVRNKKVRETESFFAEMVKNEWPP 385
R ++ +++ + +M ++ P
Sbjct: 460 GFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 13/215 (6%)
Query: 264 EEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAM 323
EE+ F K+++ P + F+ L K + I L+ M GI +L YN +
Sbjct: 52 EEIDLFCKMIQSRP-LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 324 IGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEW 383
I C A ++ +M+ G PD +T + + + +V + ++M + +
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170
Query: 384 PP------TSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSR 437
P T + + I ++ D A E++ M + V+ + N+L+ G+C R
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVND------AVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 438 FSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR 472
+S+ R DM+ R I+ T + D F EG+
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 259
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 157/346 (45%), Gaps = 10/346 (2%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVM 166
+ +++ L +E + ++ M++ G+ + T+ S C +F +A M
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAILLEGWEKEGN 225
G+ +V+ N+L++ C + A++ E ++ K++P+ ++ L++G+ K N
Sbjct: 385 LEKGLMPNVITYNALINGYC-KRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SN 442
Query: 226 AAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFF 285
KA +M+ R +V+ Y++ + R+ + R L +M D P +
Sbjct: 443 VHKAMGVLNKMLERKVLP--DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Query: 286 TYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVL 345
T +D K A L+D++ G+ PN++MY A+I C G+VD A +L++M+
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Query: 346 HGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEA 405
P+SLT+N + L + K++E +MVK PT S I L D +
Sbjct: 561 KNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDH 620
Query: 406 AHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDR 451
A+ + M+ + KP + + C R + AEDM+ +
Sbjct: 621 AYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD----AEDMMAK 662
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 139/308 (45%), Gaps = 5/308 (1%)
Query: 143 FVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV 202
+ CVA R +EA+ F M + V L+ S+C E + S A+ +E+
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK-SEALNLVKEM 349
Query: 203 -KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRAS 261
+ I P+ ++ +L++ + KA+ G+M+ + NV+ Y+A + +
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK--GLMPNVITYNALINGYCKRG 407
Query: 262 QIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYN 321
IE+ + +++M+ P + + + + K N A+ + + M+ ++P+++ YN
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYN 466
Query: 322 AMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKN 381
++I QC +G D+A+RLL M G PD TY + L ++K+V E F + +
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 382 EWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEV 441
P A I + AH + M+ + P + NAL+ G+C+ + E
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 442 RRHAEDML 449
E M+
Sbjct: 587 TLLEEKMV 594
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 175/447 (39%), Gaps = 36/447 (8%)
Query: 68 SGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGR--LQKHSPHAWNLMVDLLGKNELF--- 122
S I PS V + L + P +A+ F W + KHS +++ ++ LL N
Sbjct: 86 SAISPSH--VSSLFSLDLD-PKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVV 142
Query: 123 -----------DPMWDAI------RSMKQEGVLTLR------TFVSAFQSYCVAGRFNEA 159
D + DA+ R M ++ L+ + + S G +E
Sbjct: 143 FKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEM 202
Query: 160 IMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEG 219
+ M + ++ N +++ C N + V+ + PD ++ L+ G
Sbjct: 203 KQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMG 262
Query: 220 WEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCF 279
+ + + A F EM ++ + N +AY + L A +I+E + MKD +CF
Sbjct: 263 YCQRKDLDSAFKVFNEMPLK--GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF 320
Query: 280 PGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRL 339
P ++ +T + + A+ L M GI PN+ Y +I C+ + + A L
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 340 LDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFD 399
L +M+ G P+ +TYN + + + + M + P + I
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 400 CDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYEST 459
+ A + + M+E V P + N+L+ G C F R M DR ++ + T
Sbjct: 441 -SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 460 MNKLKDAFYTEGRSRK--DRFDSLFRR 484
+ D+ R + D FDSL ++
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQK 526
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 145/346 (41%), Gaps = 28/346 (8%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLR-TFVSAFQSYCVAGRFNEAIMSFDVM 166
+N ++D ++ FD + + M G++ + T+ S S C + R EA FD +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGN 225
+ G+ +VV +L+ C + + A E++ K P+ +F L+ G +G
Sbjct: 524 EQKGVNPNVVMYTALIDGYC-KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582
Query: 226 AAKAKTTFGEMVIRVGWSKENVMAYDAFLL-TLLRASQIEEVLRFLKVMKDHDCFPGLKF 284
+A T E ++++G + ++ D L+ LL+ + + M P
Sbjct: 583 LKEA-TLLEEKMVKIGL--QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHT 639
Query: 285 FTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMV 344
+T + + +E A + M G+ P+L Y+++I + G+ + AF +L M
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699
Query: 345 LHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPE 404
G P T+ + K L+ K ++ K P CA + M FD
Sbjct: 700 DTGCEPSQHTFLSLIKHLLEMKYGKQ---------KGSEPEL---CAMSNMMEFD----- 742
Query: 405 AAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLD 450
E+ MVE+ V P +S L++GIC + R AE + D
Sbjct: 743 TVVELLEKMVEHSVTPNAKSYEKLILGICEVGNL----RVAEKVFD 784
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/362 (19%), Positives = 144/362 (39%), Gaps = 37/362 (10%)
Query: 103 KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIM 161
K + H + +++D L F+ + + M ++G++ + T+ + YC G +A+
Sbjct: 355 KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD 414
Query: 162 SFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGW 220
++M++ + + N L+ C ++ AM + ++ K+ PD ++ L++G
Sbjct: 415 VVELMESRKLSPNTRTYNELIKGYC--KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQ 472
Query: 221 EKEGNAAKA---------------KTTFGEMVIRVGWSKE------------------NV 247
+ GN A + T+ M+ + SK NV
Sbjct: 473 CRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNV 532
Query: 248 MAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDA 307
+ Y A + +A +++E L+ M +C P F + + A L +
Sbjct: 533 VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEK 592
Query: 308 MVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKK 367
MV G+ P + +I +G+ D+A+ +M+ G PD+ TY + R +
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Query: 368 VRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANA 427
+ + E A+M +N P ++ I D A ++ M + +P + +
Sbjct: 653 LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLS 712
Query: 428 LL 429
L+
Sbjct: 713 LI 714
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 153/359 (42%), Gaps = 5/359 (1%)
Query: 112 MVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHG 170
++ + K FD + M+ G+ L T+ +C + + A+ M G
Sbjct: 87 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLG 146
Query: 171 IEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNAAKA 229
E D+V +NSLL+ C N+ S A+ + V+ PD +F L+ G + A++A
Sbjct: 147 YEPDIVTLNSLLNGFC-HGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEA 205
Query: 230 KTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYAL 289
MV++ + +++ Y + L + I+ L LK M+ PG+ + +
Sbjct: 206 VALVDRMVVK--GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 290 DVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAF 349
D + A+ L+ M GI PN++ YN++I CN G +A RLL +M+
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 350 PDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEI 409
P+ +T++ + V+ K+ E E + EM+K P ++ I D + A +
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383
Query: 410 WSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFY 468
+ M+ P + N L+ G C R E +M R ++ T L F+
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF 442
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 142/330 (43%), Gaps = 9/330 (2%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQ----EGVLTLRTFVSAFQSYCVAGRFNEAIMSF 163
+ ++V+ L K D ++ M+Q GV+ T + A +Y N+A+ F
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNY---KNVNDALNLF 279
Query: 164 DVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKE 223
MDN GI +VV NSL+ +C + + + ++ KI P+ +F+ L++ + KE
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Query: 224 GNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLK 283
G +A+ + EM+ R ++ Y + + +++E ++M DCFP +
Sbjct: 340 GKLVEAEKLYDEMIKR--SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 397
Query: 284 FFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEM 343
+ + F K + L+ M G++ N + Y +I E DNA + +M
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457
Query: 344 VLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDP 403
V G PD +TY+++ L N KV F + +++ P I +
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Query: 404 EAAHEIWSYMVENHVKPLHESANALLIGIC 433
E +++ + VKP + ++ G C
Sbjct: 518 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 126/281 (44%), Gaps = 4/281 (1%)
Query: 155 RFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-KGKIAPDGDSF 213
R +EA+ D M G + D+V +++ +C + A+ +++ +GKI P +
Sbjct: 201 RASEAVALVDRMVVKGCQPDLVTYGIVVNGLC-KRGDIDLALSLLKKMEQGKIEPGVVIY 259
Query: 214 AILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVM 273
+++ N A F EM + + NV+ Y++ + L + + R L M
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNK--GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 274 KDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEV 333
+ P + F+ +D FVKE A L+D M+ I P++ Y+++I C + +
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 334 DNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAA 393
D A + + M+ FP+ +TYN + K + K+V E F EM + +
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 394 IAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICS 434
I F + + A ++ MV + V P + + LL G+C+
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 121/289 (41%), Gaps = 4/289 (1%)
Query: 198 FFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTL 257
F + VK + P F+ LL K N + GE + +G S N+ Y +
Sbjct: 69 FGDMVKSRPFPSIVEFSKLLSAIAKM-NKFDLVISLGEQMQNLGIS-HNLYTYSILINCF 126
Query: 258 LRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNL 317
R SQ+ L L M P + L+ F N + A+ L MV G P+
Sbjct: 127 CRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDS 186
Query: 318 IMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAE 377
+N +I + A L+D MV+ G PD +TY ++ L + + S +
Sbjct: 187 FTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKK 246
Query: 378 MVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSR 437
M + + P I L + + A +++ M ++P + N+L+ +C+ R
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 438 FSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR--SRKDRFDSLFRR 484
+S+ R DM++R+I T + L DAF EG+ + +D + +R
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 151/375 (40%), Gaps = 34/375 (9%)
Query: 43 SPVARTLCNLLTRTSPPEIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRW--AGR 100
+ + LCN + T + + GI P+ +++ NY RW A R
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG-------RWSDASR 312
Query: 101 L------QKHSPHA--WNLMVD-------LLGKNELFDPMWDAIRSMKQEGVLTLRTFVS 145
L +K +P+ ++ ++D L+ +L+D M RS+ + + T+ S
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK--RSIDPD----IFTYSS 366
Query: 146 AFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK 205
+C+ R +EA F++M + +VV N+L+ C + + ME F E+ +
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC-KAKRVDEGMELFREMSQR 425
Query: 206 -IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIE 264
+ + ++ L+ G+ + A+ F +MV ++M Y L L ++E
Sbjct: 426 GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV--SDGVLPDIMTYSILLDGLCNNGKVE 483
Query: 265 EVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMI 324
L + ++ P + + ++ K L+ ++ G+ PN++ Y M+
Sbjct: 484 TALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 543
Query: 325 GLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWP 384
C G + A L EM G PDS TYN + + +R+ + EM +
Sbjct: 544 SGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 603
Query: 385 PTSSNCAAAIAMLFD 399
+S ML D
Sbjct: 604 GDASTIGLVTNMLHD 618
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 141/321 (43%), Gaps = 7/321 (2%)
Query: 153 AGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIA-PDGD 211
G E + M HG D++ +L+ C +T A + E ++G A PD
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFC-RLGKTRKAAKILEILEGSGAVPDVI 173
Query: 212 SFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLK 271
++ +++ G+ K G A + M + +V+ Y+ L +L + ++++ + L
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSV-----SPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 272 VMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNG 331
M DC+P + +T ++ +++ HA+ L D M G P+++ YN ++ C G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 332 EVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCA 391
+D A + L++M G P+ +T+N+I + + + + E A+M++ + P+
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 392 AAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDR 451
I L A +I M ++ +P S N LL G C + + E M+ R
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 452 RIIIYESTMNKLKDAFYTEGR 472
T N + A +G+
Sbjct: 409 GCYPDIVTYNTMLTALCKDGK 429
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 139/337 (41%), Gaps = 10/337 (2%)
Query: 137 VLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAM 196
V+T +S YC AG N A+ V+D + DVV N++L S+C + + AM
Sbjct: 172 VITYNVMISG---YCKAGEINNAL---SVLDRMSVSPDVVTYNTILRSLC-DSGKLKQAM 224
Query: 197 EFFEE-VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLL 255
E + ++ PD ++ IL+E ++ A EM R +V+ Y+ +
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR--GCTPDVVTYNVLVN 282
Query: 256 TLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMP 315
+ + +++E ++FL M C P + L A L M+ G P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 316 NLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFF 375
+++ +N +I C G + A +L++M HG P+SL+YN + + KK+ +
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 376 AEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSL 435
MV P + L E A EI + + P+ + N ++ G+
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 436 SRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR 472
+ + + ++M + + T + L EG+
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 132/313 (42%), Gaps = 8/313 (2%)
Query: 120 ELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVN 179
+L D M D R + V+T V+ C GR +EAI + M + G + +V+ N
Sbjct: 260 KLLDEMRD--RGCTPD-VVTYNVLVNGI---CKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 180 SLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIR 239
+L S+C + ++ +P +F IL+ ++G +A +M
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 240 VGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAA 299
+ N ++Y+ L + +++ + +L+ M C+P + + L K+
Sbjct: 374 --GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 300 HAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIF 359
A+ + + + + G P LI YN +I G+ A +LLDEM PD++TY+ +
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Query: 360 KCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVK 419
L R KV E FF E + P + + + L + A + +M+ K
Sbjct: 492 GGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCK 551
Query: 420 PLHESANALLIGI 432
P S L+ G+
Sbjct: 552 PNETSYTILIEGL 564
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 7/197 (3%)
Query: 254 LLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGI 313
L ++R ++EE +FL+ M H P + T + F + A + + + G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 314 MPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETES 373
+P++I YN MI C GE++NA +LD M + PD +TYN I + L + K+++
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAME 225
Query: 374 FFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAH--EIWSYMVENHVKPLHESANALLIG 431
M++ + P I + C D H ++ M + P + N L+ G
Sbjct: 226 VLDRMLQRDCYPDV--ITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG 283
Query: 432 ICSLSRFSEVRRHAEDM 448
IC R E + DM
Sbjct: 284 ICKEGRLDEAIKFLNDM 300
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 101/243 (41%), Gaps = 38/243 (15%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVM 166
+N++++ L + L D + M Q G ++ +C + + AI + M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 167 DNHGIEKDVVAVNSLLSSIC----------------------------------CEENQT 192
+ G D+V N++L+++C + +T
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 193 STAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYD 251
A++ +E++ K + PD +++ L+ G +EG +A F E R+G + N + ++
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE-RMGI-RPNAVTFN 523
Query: 252 AFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAG 311
+ +L L ++ Q + + FL M + C P +T ++ E A A+ L + +
Sbjct: 524 SIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNK 583
Query: 312 GIM 314
G+M
Sbjct: 584 GLM 586
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 155/336 (46%), Gaps = 10/336 (2%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEA--IMSFDV 165
+ +++ L K D D + + ++ T + F ++ GR ++A ++S D+
Sbjct: 324 TYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTH---GRLDDAKAVLS-DM 379
Query: 166 MDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEG 224
+ ++GI DV NSL+ +E A+E +++ K P+ S+ IL++G+ K G
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYW-KEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLG 438
Query: 225 NAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKF 284
+A EM K N + ++ + + +I E + + M C P +
Sbjct: 439 KIDEAYNVLNEM--SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 285 FTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMV 344
F + + ++ HA+ L M++ G++ N + YN +I GE+ A +L++EMV
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 345 LHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPE 404
G+ D +TYN + K L R +V + S F +M+++ P++ +C I L E
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 405 AAHEIWSYMVENHVKPLHESANALLIGICSLSRFSE 440
A E MV P + N+L+ G+C R +
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIED 652
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 149/346 (43%), Gaps = 19/346 (5%)
Query: 139 TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEF 198
TL TF +++C + A+ M HG + V +L+ S+ + N+ + A++
Sbjct: 216 TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSL-SKCNRVNEALQL 274
Query: 199 FEEV-KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTL 257
EE+ PD ++F ++ G K +A M+IR G++ +++ Y + L
Sbjct: 275 LEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR-GFAPDDI-TYGYLMNGL 332
Query: 258 LRASQIEEVLR-FLKVMKDHDCFPGLKFFTYALDVFVKEN--DAAHAIPLWDAMVAGGIM 314
+ +++ F ++ K P + F + FV D A A+ L D + + GI+
Sbjct: 333 CKIGRVDAAKDLFYRIPK-----PEIVIFNTLIHGFVTHGRLDDAKAV-LSDMVTSYGIV 386
Query: 315 PNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESF 374
P++ YN++I G V A +L +M G P+ +Y ++ + K+ E +
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 375 FAEMVKNEWPPTSSNCAAAIAMLFDCDD---PEAAHEIWSYMVENHVKPLHESANALLIG 431
EM + P + I+ C + PEA EI+ M KP + N+L+ G
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAF--CKEHRIPEAV-EIFREMPRKGCKPDVYTFNSLISG 503
Query: 432 ICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRKDR 477
+C + DM+ ++ T N L +AF G ++ R
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 127/295 (43%), Gaps = 22/295 (7%)
Query: 108 AWNLMVDLLGKNELFDPMW---------DAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFN 157
++ ++ D+ N L W + + M+ +G + ++ +C G+ +
Sbjct: 382 SYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKID 441
Query: 158 EAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAIL 216
EA + M G++ + V N L+S+ C +E++ A+E F E+ K PD +F L
Sbjct: 442 EAYNVLNEMSADGLKPNTVGFNCLISAFC-KEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 217 LEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDH 276
+ G + A +M+ N + Y+ + LR +I+E + + M
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISE--GVVANTVTYNTLINAFLRRGEIKEARKLVNEM--- 555
Query: 277 DCFPG--LKFFTY--ALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGE 332
F G L TY + + + A L++ M+ G P+ I N +I C +G
Sbjct: 556 -VFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGM 614
Query: 333 VDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTS 387
V+ A EMVL G+ PD +T+N + L R ++ + + F ++ PP +
Sbjct: 615 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDT 669
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 125/288 (43%), Gaps = 11/288 (3%)
Query: 103 KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGV----LTLRTFVSAFQSYCVAGRFNE 158
K + +++ ++VD K D ++ + M +G+ + +SAF C R E
Sbjct: 421 KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF---CKEHRIPE 477
Query: 159 AIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILL 217
A+ F M G + DV NSL+S +C E ++ A+ + + + + ++ L+
Sbjct: 478 AVEIFREMPRKGCKPDVYTFNSLISGLC-EVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 218 EGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHD 277
+ + G +A+ EMV + S + + Y++ + L RA ++++ + M
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQ--GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 278 CFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAF 337
P ++ + A+ MV G P+++ +N++I C G +++
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 338 RLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPP 385
+ ++ G PD++T+N + L + V + E +++ + P
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVP 702
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 141/370 (38%), Gaps = 15/370 (4%)
Query: 119 NELFDPMWDAIRSMKQEG-VLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVA 177
NE+ D +R M + G V + + S R NEA+ + M G D
Sbjct: 231 NEI-DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET 289
Query: 178 VNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMV 237
N ++ +C + A + APD ++ L+ G K G AK F +
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI- 348
Query: 238 IRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVM-KDHDCFPGLKFFTYALDVFVKEN 296
K ++ ++ + + ++++ L M + P + + + + KE
Sbjct: 349 -----PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEG 403
Query: 297 DAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYN 356
A+ + M G PN+ Y ++ C G++D A+ +L+EM G P+++ +N
Sbjct: 404 LVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFN 463
Query: 357 MIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSY--MV 414
+ + ++ E F EM + P + I+ L C+ E H +W M+
Sbjct: 464 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL--CEVDEIKHALWLLRDMI 521
Query: 415 ENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSR 474
V + N L+ E R+ +M+ + + E T N L G
Sbjct: 522 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVD 581
Query: 475 KDRFDSLFRR 484
K R SLF +
Sbjct: 582 KAR--SLFEK 589
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 9/233 (3%)
Query: 245 ENVMAYDAFLLTLLR----ASQIEEVLRFLKVMKD-HDCFPGLKFFTYALDVFVKENDAA 299
E ++ ++ ++++R A + R + M++ + C P K + L++ V N
Sbjct: 140 EGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHK 199
Query: 300 HAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIF 359
A ++ M++ I P L + ++ C E+D+A LL +M HG P+S+ Y +
Sbjct: 200 VAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLI 259
Query: 360 KCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVK 419
L + +V E EM P + I L D A ++ + M+
Sbjct: 260 HSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFA 319
Query: 420 PLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR 472
P + L+ G+C + R + + I+I+ N L F T GR
Sbjct: 320 PDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIF----NTLIHGFVTHGR 368
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 171/417 (41%), Gaps = 10/417 (2%)
Query: 42 VSPVARTLCNLLTRTSPPEIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGRL 101
V + R L N +R P++E AL SGI + VL + + +FF WA +
Sbjct: 67 VEKIYRILRNHHSRV--PKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQ 124
Query: 102 QK--HSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEG--VLTLRTFVSAFQSYCVAGRFN 157
HS MV +L K F +W I M++ ++ FV + + A
Sbjct: 125 PGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVK 184
Query: 158 EAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILL 217
+A+ D M +G+E D LL ++ C+ A + FE+++ K P+ F LL
Sbjct: 185 KAVEVLDEMPKYGLEPDEYVFGCLLDAL-CKNGSVKEASKVFEDMREKFPPNLRYFTSLL 243
Query: 218 EGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHD 277
GW +EG +AK +M + + +++ + L A ++ + + M+
Sbjct: 244 YGWCREGKLMEAKEVLVQM--KEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRG 301
Query: 278 CFPGLKFFTYALDVFVK-ENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNA 336
P + +T + + E A+ ++ M G +++ Y A+I C G +D
Sbjct: 302 FEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKG 361
Query: 337 FRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAM 396
+ +LD+M G P +TY I + ++ E +M + P I +
Sbjct: 362 YSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRL 421
Query: 397 LFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRI 453
+ + A +W+ M N + P ++ ++ G S E H ++M+ R I
Sbjct: 422 ACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 167/373 (44%), Gaps = 21/373 (5%)
Query: 111 LMVDLLGKNELFDPMW---DAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMD 167
LM+ LL +N D + + IR Q V T ++A C G+ N+A + M
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINAL---CKTGKMNKARDVMEDMK 250
Query: 168 NHGIEKDVVAVNSLLSSIC--CEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEG 224
+G +VV+ N+L+ C + A +E V+ ++P+ +F IL++G+ K+
Sbjct: 251 VYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDD 310
Query: 225 NAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKF 284
N + F EM+ + K NV++Y++ + L +I E + M P L
Sbjct: 311 NLPGSMKVFKEMLDQ--DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLIT 368
Query: 285 FTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMV 344
+ ++ F K + A+ ++ ++ G +P MYN +I C G++D+ F L +EM
Sbjct: 369 YNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEME 428
Query: 345 LHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPE 404
G PD TYN + L RN + + F ++ P + I M C E
Sbjct: 429 REGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVT---FHILMEGYCRKGE 485
Query: 405 A--AHEIWSYMVENHVKPLHESANALLIGIC---SLSRFSEVRRHAEDMLDRRIIIYEST 459
+ A + M + +KP H + N ++ G C +L + +R E +RR+ + ++
Sbjct: 486 SRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEK--ERRLRMNVAS 543
Query: 460 MNKLKDAFYTEGR 472
N L + +G+
Sbjct: 544 YNVLLQGYSQKGK 556
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 89/208 (42%), Gaps = 7/208 (3%)
Query: 244 KENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIP 303
K + ++ ++ LL+ ++ +V K M P + F ++ K A
Sbjct: 185 KLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARD 244
Query: 304 LWDAMVAGGIMPNLIMYNAMIGLQC---NNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFK 360
+ + M G PN++ YN +I C NG++ A +L EMV + P+ T+N++
Sbjct: 245 VMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILID 304
Query: 361 CLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKP 420
++ + + F EM+ + P + + I L + A + MV V+P
Sbjct: 305 GFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQP 364
Query: 421 LHESANALLIGICSLSRFSEVRRHAEDM 448
+ NAL+ G C +++ + A DM
Sbjct: 365 NLITYNALINGFCK----NDMLKEALDM 388
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 150/324 (46%), Gaps = 8/324 (2%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
TF + + + G+ +EA++ D M +G + DVV NS+++ IC TS A++ +
Sbjct: 160 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC-RSGDTSLALDLLRK 218
Query: 202 VKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
++ + + D +++ +++ ++G A + F EM + K +V+ Y++ + L +A
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK--GIKSSVVTYNSLVRGLCKA 276
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
+ + LK M + P + F LDVFVKE A L+ M+ GI PN+I Y
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
N ++ C + A +LD MV + PD +T+ + K K+V + F + K
Sbjct: 337 NTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK 396
Query: 381 NEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSE 440
+ + + + A E++ MV + V P + LL G+C + +
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 456
Query: 441 VRRHAEDM----LDRRIIIYESTM 460
ED+ +D I++Y + +
Sbjct: 457 ALEIFEDLQKSKMDLGIVMYTTII 480
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 126/293 (43%), Gaps = 5/293 (1%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVM 166
+N+++D+ K + + M G+ + T+ + YC+ R +EA D+M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-KGKIAPDGDSFAILLEGWEKEGN 225
+ D+V SL+ C + + M+ F + K + + +++IL++G+ + G
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVK-RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 226 AAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFF 285
A+ F EMV +VM Y L L ++E+ L + ++ G+ +
Sbjct: 419 IKLAEELFQEMVSH--GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 286 TYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVL 345
T ++ K A L+ ++ G+ PN++ Y MI C G + A LL +M
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Query: 346 HGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLF 398
G P+ TYN + + +R+ + + EM + +S+ I ML
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 4/225 (1%)
Query: 250 YDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMV 309
+ F + R Q VL F K ++ + + ++ F + A + ++
Sbjct: 91 FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150
Query: 310 AGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVR 369
G P+ +N +I G+V A L+D MV +G PD +TYN I + R+
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 370 ETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDP--EAAHEIWSYMVENHVKPLHESANA 427
+M + + I L C D +AA ++ M +K + N+
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSL--CRDGCIDAAISLFKEMETKGIKSSVVTYNS 268
Query: 428 LLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR 472
L+ G+C ++++ +DM+ R I+ T N L D F EG+
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/433 (21%), Positives = 187/433 (43%), Gaps = 14/433 (3%)
Query: 30 PNEFPTHLDTPNVSPVARTLCNLLTR---TSPPEIETALTSSGIHPSDDCVREVLKLSYN 86
P++FP + A + N++ +SP +I+ L GI +++ V EV+ + +
Sbjct: 62 PDKFPNRFNDDKDKQSALDVHNIIKHHRGSSPEKIKRILDKCGIDLTEELVLEVVNRNRS 121
Query: 87 YPHSAVKFFRWAGRLQKH--SPHAWNLMVDLLGKNELFDPMWDAIRSM-KQEGVLTLRTF 143
A + + H S +N ++D+LGK F+ M K++G + +T+
Sbjct: 122 DWKPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTY 181
Query: 144 VSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK 203
Y A + +EA+ F+ GI+ D+VA + LL +C A F +
Sbjct: 182 EVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLC-RYKHVEFAETLFCSRR 240
Query: 204 GKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQI 263
+ D + ++L GW GN +AK + +++ + +V++Y + L + ++
Sbjct: 241 REFGCDIKAMNMILNGWCVLGNVHEAKRFWKDII--ASKCRPDVVSYGTMINALTKKGKL 298
Query: 264 EEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAM 323
+ + + M D P +K +D + A+ ++ + G PN++ YN++
Sbjct: 299 GKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSL 358
Query: 324 IGLQCNNGEVDNAFRLLDEMVLHGA--FPDSLTYNMIFKCLVRNKKVRETESFFAEMVKN 381
+ C + + L++EM L G P+ +T++ + K R+K V + M KN
Sbjct: 359 LKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDV---DIVLERMAKN 415
Query: 382 EWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEV 441
+ TS + D E EIWS M + + P + + G+ + + E
Sbjct: 416 KCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEA 475
Query: 442 RRHAEDMLDRRII 454
+ ++M+ + ++
Sbjct: 476 LSYFQEMMSKGMV 488
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 179/417 (42%), Gaps = 26/417 (6%)
Query: 80 VLKLSYNYPHSAVKFFRWAGRLQ--KHSPHAWNLMVDLLGKNELFDP------------- 124
+LK+ +Y S ++FF WA HS +++ L KN F
Sbjct: 88 LLKIQKDYLLS-LEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGG 146
Query: 125 ------MWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAV 178
++DA+ +E T R F S F+++ +F A +F M ++G V +
Sbjct: 147 VDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESC 206
Query: 179 NSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMV 237
N+ +SS+ + + A+ F+ E++ KI+P+ + +++ G+ + G K +M
Sbjct: 207 NAYMSSLL-GQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDME 265
Query: 238 IRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKEND 297
R+G+ +V +Y+ + + L+ +M P + F + F +
Sbjct: 266 -RLGFRATDV-SYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMK 323
Query: 298 AAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNM 357
A ++ M A + PN + YN +I G+ + AFR ++MV +G D LTYN
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNA 383
Query: 358 IFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENH 417
+ L + K R+ F E+ K P SS +A I + + E++ M+ +
Sbjct: 384 LIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
Query: 418 VKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSR 474
P ++ N L+ C F + +M+ R I + T++++ + +G+ +
Sbjct: 444 CHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQ 500
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 138/302 (45%), Gaps = 6/302 (1%)
Query: 91 AVKFFRWAGRLQ-KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGV-LTLRTFVSAFQ 148
A++F+R R + +P+ N+++ ++ D + ++ M++ G T ++ +
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 149 SYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIA 207
+C G + A+ ++M G++ +VV N+L+ C + A + F E+K +A
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFC-RAMKLQEASKVFGEMKAVNVA 340
Query: 208 PDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVL 267
P+ ++ L+ G+ ++G+ A + +MV + +++ Y+A + L + ++ +
Sbjct: 341 PNTVTYNTLINGYSQQGDHEMAFRFYEDMV--CNGIQRDILTYNALIFGLCKQAKTRKAA 398
Query: 268 RFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQ 327
+F+K + + P F+ + +A L+ +M+ G PN +N ++
Sbjct: 399 QFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Query: 328 CNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTS 387
C N + D A ++L EMV DS T + + L K + + EM ++ S
Sbjct: 459 CRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES 518
Query: 388 SN 389
N
Sbjct: 519 FN 520
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 179/417 (42%), Gaps = 26/417 (6%)
Query: 80 VLKLSYNYPHSAVKFFRWAGRLQ--KHSPHAWNLMVDLLGKNELFDP------------- 124
+LK+ +Y S ++FF WA HS +++ L KN F
Sbjct: 88 LLKIQKDYLLS-LEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGG 146
Query: 125 ------MWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAV 178
++DA+ +E T R F S F+++ +F A +F M ++G V +
Sbjct: 147 VDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESC 206
Query: 179 NSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMV 237
N+ +SS+ + + A+ F+ E++ KI+P+ + +++ G+ + G K +M
Sbjct: 207 NAYMSSLL-GQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDME 265
Query: 238 IRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKEND 297
R+G+ +V +Y+ + + L+ +M P + F + F +
Sbjct: 266 -RLGFRATDV-SYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMK 323
Query: 298 AAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNM 357
A ++ M A + PN + YN +I G+ + AFR ++MV +G D LTYN
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNA 383
Query: 358 IFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENH 417
+ L + K R+ F E+ K P SS +A I + + E++ M+ +
Sbjct: 384 LIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
Query: 418 VKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSR 474
P ++ N L+ C F + +M+ R I + T++++ + +G+ +
Sbjct: 444 CHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQ 500
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 138/302 (45%), Gaps = 6/302 (1%)
Query: 91 AVKFFRWAGRLQ-KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGV-LTLRTFVSAFQ 148
A++F+R R + +P+ N+++ ++ D + ++ M++ G T ++ +
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 149 SYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIA 207
+C G + A+ ++M G++ +VV N+L+ C + A + F E+K +A
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFC-RAMKLQEASKVFGEMKAVNVA 340
Query: 208 PDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVL 267
P+ ++ L+ G+ ++G+ A + +MV + +++ Y+A + L + ++ +
Sbjct: 341 PNTVTYNTLINGYSQQGDHEMAFRFYEDMV--CNGIQRDILTYNALIFGLCKQAKTRKAA 398
Query: 268 RFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQ 327
+F+K + + P F+ + +A L+ +M+ G PN +N ++
Sbjct: 399 QFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Query: 328 CNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTS 387
C N + D A ++L EMV DS T + + L K + + EM ++ S
Sbjct: 459 CRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES 518
Query: 388 SN 389
N
Sbjct: 519 FN 520
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 183/438 (41%), Gaps = 47/438 (10%)
Query: 45 VARTLCNLLTRTSPPEIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGRLQKH 104
++ + ++L + P IE AL S + + V+K N +FF WA R ++
Sbjct: 33 ISGEVISILAKKKP--IEPALEPLVPFLSKNIITSVIKDEVN-RQLGFRFFIWASRRERL 89
Query: 105 SPHA-WNLMVDLLGKNELFDPMWDAIRSMKQEGV-LTLRTFVSAFQSYCVAGRFNEAIMS 162
+ L++D+L ++ D W + +K GV + F +Y G +A+ S
Sbjct: 90 RSRESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVES 149
Query: 163 FDVMDNHGIEKDVVAVNSLLSSICCEE--------------------------------- 189
F M DV N +L + EE
Sbjct: 150 FGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLY 209
Query: 190 --NQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKEN 246
+TS A + F+++ G+ I+P+ ++ IL+ G + G+A A+ F EM + + +
Sbjct: 210 KKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEM--QTSGNYPD 267
Query: 247 VMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWD 306
+A++A L + ++ E L++ + GL+ ++ +D + A L+
Sbjct: 268 SVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYA 327
Query: 307 AMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNK 366
M+ I P++I+Y +I G++++A +LL M G PD+ YN + K L
Sbjct: 328 NMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRG 387
Query: 367 KVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDP--EAAHEIWSYMVENHVKPLHES 424
+ E S EM + E P + C I + C + A EI++ + ++ P +
Sbjct: 388 LLEEGRSLQLEMSETESFPDA--CTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVAT 445
Query: 425 ANALLIGICSLSRFSEVR 442
NAL+ G+C E R
Sbjct: 446 FNALIDGLCKSGELKEAR 463
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 102/234 (43%), Gaps = 14/234 (5%)
Query: 148 QSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCE---ENQTSTAMEFFEEVKG 204
Q AG+ +A+ M + GI D N+++ ++C E S +E E
Sbjct: 346 QGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSET--- 402
Query: 205 KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIE 264
+ PD + IL+ + G +A+ F E I +V ++A + L ++ +++
Sbjct: 403 ESFPDACTHTILICSMCRNGLVREAEEIFTE--IEKSGCSPSVATFNALIDGLCKSGELK 460
Query: 265 E---VLRFLKVMKDHDCFPGLKFF-TYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
E +L ++V + F L + D V+ A G P+++ Y
Sbjct: 461 EARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSY 520
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESF 374
N +I C G++D A +LL+ + L G PDS+TYN + L R RE E+F
Sbjct: 521 NVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVG--REEEAF 572
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 165/383 (43%), Gaps = 15/383 (3%)
Query: 77 VREVLKLSYNYPHSAVKFFRWAGRLQ--KHSPHAWNLMVDLLGKNELFDPMWDAIRSM-- 132
V E L N A++FF W R +H+ +N ++D+LGK F+ W I M
Sbjct: 50 VCEALTCYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIG 109
Query: 133 KQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQT 192
E V TF F+ Y A EAI ++D +D+ + +D + +L+ ++C E
Sbjct: 110 NTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNL-RDETSFYNLVDALC-EHKHV 167
Query: 193 STAME--FFEEVKGK--IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVM 248
A E F + V G + ++L GW K G K K + +M G +K ++
Sbjct: 168 VEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTE-GVTK-DLF 225
Query: 249 AYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAM 308
+Y ++ + ++ + + ++ K MK + + + I ++ M
Sbjct: 226 SYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREM 285
Query: 309 VAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKV 368
G PN+ +N +I L C +G + +A+R+LDEM G PDS+TY +F R +K
Sbjct: 286 RERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFS---RLEKP 342
Query: 369 RETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANAL 428
E S F M+++ P + + +W M E+ P + NA+
Sbjct: 343 SEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAV 402
Query: 429 LIGICSLSRFSEVRRHAEDMLDR 451
+ + R + E+M++R
Sbjct: 403 IDALIQKGMLDMAREYEEEMIER 425
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 135/287 (47%), Gaps = 5/287 (1%)
Query: 107 HAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDV 165
H +N ++ L + D + +M+ GV T T++ Y +G A+ +F+
Sbjct: 399 HTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 458
Query: 166 MDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAILLEGWEKEG 224
M GI ++VA N+ L S+ + + A + F +K + PD ++ ++++ + K G
Sbjct: 459 MKTKGIAPNIVACNASLYSLA-KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVG 517
Query: 225 NAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKF 284
+A EM+ + +V+ ++ + TL +A +++E + MK+ P +
Sbjct: 518 EIDEAIKLLSEMM--ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575
Query: 285 FTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMV 344
+ L K AI L++ MV G PN I +N + C N EV A ++L +M+
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Query: 345 LHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCA 391
G PD TYN I LV+N +V+E FF +M K +P + C
Sbjct: 636 DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCT 682
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 167/402 (41%), Gaps = 41/402 (10%)
Query: 101 LQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEA 159
LQ +S +LMV L GK D + ++ M+ G+ + TF + AG+ NEA
Sbjct: 223 LQTYS----SLMVGL-GKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 160 IMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK-GKIAPDGDSFAILLE 218
MD+ G DVV L+ ++C + A E FE++K G+ PD ++ LL+
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALC-TARKLDCAKEVFEKMKTGRHKPDRVTYITLLD 336
Query: 219 GW----------------EKEGNAAKAKT------------TFGEM-----VIRVGWSKE 245
+ EK+G+ T FGE V+R
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396
Query: 246 NVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLW 305
N+ Y+ + LLR ++++ L M+ P + +D + K D+ A+ +
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456
Query: 306 DAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRN 365
+ M GI PN++ NA + G A ++ + G PDS+TYNM+ KC +
Sbjct: 457 EKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKV 516
Query: 366 KKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESA 425
++ E +EM++N P + I L+ D + A +++ M E +KP +
Sbjct: 517 GEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTY 576
Query: 426 NALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAF 467
N LL G+ + E E M+ + T N L D
Sbjct: 577 NTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL 618
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 153/349 (43%), Gaps = 15/349 (4%)
Query: 100 RLQKHSPH--AWNLMVDLLGKNELFDPMWDAIRSMKQEG-VLTLRTFVSAFQSYCVAGRF 156
+ +H P + ++D N D + M+++G V + TF + C AG F
Sbjct: 320 KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNF 379
Query: 157 NEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAI 215
EA + DVM + GI ++ N+L+ + ++ A+E F ++ + P ++ +
Sbjct: 380 GEAFDTLDVMRDQGILPNLHTYNTLICGLL-RVHRLDDALELFGNMESLGVKPTAYTYIV 438
Query: 216 LLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKD 275
++ + K G++ A TF +M + N++A +A L +L +A + E + +KD
Sbjct: 439 FIDYYGKSGDSVSALETFEKM--KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD 496
Query: 276 HDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDN 335
P + + + K + AI L M+ G P++I+ N++I VD
Sbjct: 497 IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDE 556
Query: 336 AFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIA 395
A+++ M P +TYN + L +N K++E F MV+ PP +
Sbjct: 557 AWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNT----ITFN 612
Query: 396 MLFDC----DDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSE 440
LFDC D+ A ++ M++ P + N ++ G+ + E
Sbjct: 613 TLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 661
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 155/396 (39%), Gaps = 10/396 (2%)
Query: 94 FFRWAGRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCV 152
F R K + +N ++ LGKN + M Q+G TF + F C
Sbjct: 561 FMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 620
Query: 153 AGRFNEAI-MSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGD 211
A+ M F +MD G DV N+++ + + Q AM FF ++K + PD
Sbjct: 621 NDEVTLALKMLFKMMD-MGCVPDVFTYNTIIFGLV-KNGQVKEAMCFFHQMKKLVYPDFV 678
Query: 212 SFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFL- 270
+ LL G K A + N+ ++ + ++L + I+ + F
Sbjct: 679 TLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLF-WEDLIGSILAEAGIDNAVSFSE 737
Query: 271 KVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAG-GIMPNLIMYNAMIGLQCN 329
+++ + C G + K N+ + A L++ G+ P L YN +IG
Sbjct: 738 RLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLE 797
Query: 330 NGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSN 389
++ A + ++ G PD TYN + ++ K+ E + EM +E +
Sbjct: 798 ADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTIT 857
Query: 390 CAAAIAMLFDCDDPEAAHEI-WSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDM 448
I+ L + + A ++ + M + P + L+ G+ R E ++ E M
Sbjct: 858 HNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM 917
Query: 449 LDRRIIIYESTMNKLKDAFYTEGRSRKDRFDSLFRR 484
LD + N L + F G + D +LF+R
Sbjct: 918 LDYGCRPNCAIYNILINGFGKAGEA--DAACALFKR 951
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 5/218 (2%)
Query: 170 GIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAK 228
G++ + N L+ + E + A + F +VK PD ++ LL+ + K G +
Sbjct: 780 GVQPKLPTYNLLIGGLL-EADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838
Query: 229 AKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLR-FLKVMKDHDCFPGLKFFTY 287
+ EM + N + ++ + L++A +++ L + +M D D P +
Sbjct: 839 LFELYKEMSTH--ECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 896
Query: 288 ALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHG 347
+D K A L++ M+ G PN +YN +I GE D A L MV G
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 348 AFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPP 385
PD TY+++ CL +V E +F E+ ++ P
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNP 994
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 154/430 (35%), Gaps = 60/430 (13%)
Query: 90 SAVKFFR-WAGRLQ-KHSPHAWNLMVDLL---GKNELFDPMWDAI--RSMKQEGVLTLRT 142
S+ +F+ AG L H+ N M++ L GK E ++D + R +K++ T
Sbjct: 100 SSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRD----TNT 155
Query: 143 FVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLL-----SSICCEENQTSTAME 197
+++ F+S V G +A + M G + + N L+ S C E AME
Sbjct: 156 YLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTE------AME 209
Query: 198 FFEE-VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLT 256
+ + P +++ L+ G K + EM K NV + +
Sbjct: 210 VYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM--ETLGLKPNVYTFTICIRV 267
Query: 257 LLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALD-------------VFVKENDAAH--- 300
L RA +I E LK M D C P + +T +D VF K H
Sbjct: 268 LGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD 327
Query: 301 -------------------AIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLD 341
W M G +P+++ + ++ C G AF LD
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLD 387
Query: 342 EMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCD 401
M G P+ TYN + L+R ++ + F M PT+ I
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSG 447
Query: 402 DPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMN 461
D +A E + M + P + NA L + R E ++ + D ++ T N
Sbjct: 448 DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYN 507
Query: 462 KLKDAFYTEG 471
+ + G
Sbjct: 508 MMMKCYSKVG 517
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 133/332 (40%), Gaps = 9/332 (2%)
Query: 93 KFFRWAGRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYC 151
KF + G +Q P +NL++ L + ++ + D +K G + + T+ +Y
Sbjct: 774 KFTKDLG-VQPKLP-TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYG 831
Query: 152 VAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK--IAPD 209
+G+ +E + M H E + + N ++S + + A++ + ++ +P
Sbjct: 832 KSGKIDELFELYKEMSTHECEANTITHNIVISGLV-KAGNVDDALDLYYDLMSDRDFSPT 890
Query: 210 GDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRF 269
++ L++G K G +AK F E ++ G + N Y+ + +A + +
Sbjct: 891 ACTYGPLIDGLSKSGRLYEAKQLF-EGMLDYG-CRPNCAIYNILINGFGKAGEADAACAL 948
Query: 270 LKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCN 329
K M P LK ++ +D + + + G+ P+++ YN +I
Sbjct: 949 FKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGK 1008
Query: 330 NGEVDNAFRLLDEM-VLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSS 388
+ ++ A L +EM G PD TYN + L V E + E+ + P
Sbjct: 1009 SHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVF 1068
Query: 389 NCAAAIAMLFDCDDPEAAHEIWSYMVENHVKP 420
A I PE A+ ++ MV P
Sbjct: 1069 TFNALIRGYSLSGKPEHAYAVYQTMVTGGFSP 1100
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 70/172 (40%), Gaps = 3/172 (1%)
Query: 153 AGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK-GKIAPDGD 211
AG + A F M G+ D+ S+L C + + +F+E+K + PD
Sbjct: 939 AGEADAACALFKRMVKEGVRPDL-KTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVV 997
Query: 212 SFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLK 271
+ +++ G K +A F EM G + + + Y++ +L L A +EE +
Sbjct: 998 CYNLIINGLGKSHRLEEALVLFNEMKTSRGITPD-LYTYNSLILNLGIAGMVEEAGKIYN 1056
Query: 272 VMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAM 323
++ P + F + + HA ++ MV GG PN Y +
Sbjct: 1057 EIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 146/347 (42%), Gaps = 5/347 (1%)
Query: 107 HAWNLMVDLLGKNELFDPMWDAIRSMKQEGV-LTLRTFVSAFQSYCVAGRFNEAIMSFDV 165
+ +N +V+ L K + + M QEG + T+ S C G EA+ D
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQ 355
Query: 166 MDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEG 224
M + V N+L+S++C +ENQ A E + K I PD +F L++G
Sbjct: 356 MITRDCSPNTVTYNTLISTLC-KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 225 NAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKF 284
N A F EM R + + Y+ + +L +++E L LK M+ C +
Sbjct: 415 NHRVAMELFEEM--RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 285 FTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMV 344
+ +D F K N A ++D M G+ N + YN +I C + V++A +L+D+M+
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Query: 345 LHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPE 404
+ G PD TYN + R +++ M N P I+ L E
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 405 AAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDR 451
A ++ + + + N ++ G+ + +E +ML++
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 145/333 (43%), Gaps = 7/333 (2%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVLT-LRTFVSAFQSYCVAGRFNEAIMSFDVM 166
+N ++ L K + + R + +G+L + TF S Q C+ A+ F+ M
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK-GKIAPDGDSFAILLEGWEKEGN 225
+ G E D N L+ S+C + + A+ ++++ A ++ L++G+ K
Sbjct: 427 RSKGCEPDEFTYNMLIDSLC-SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 226 AAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFF 285
+A+ F EM + G S+ N + Y+ + L ++ ++E+ + + M P +
Sbjct: 486 TREAEEIFDEMEVH-GVSR-NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543
Query: 286 TYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVL 345
L F + D A + AM + G P+++ Y +I C G V+ A +LL + +
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Query: 346 HGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMV-KNEWPPTSSNCAAAIAMLFDCDDP- 403
G YN + + L R +K E + F EM+ +NE PP + + L + P
Sbjct: 604 KGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPI 663
Query: 404 EAAHEIWSYMVENHVKPLHESANALLIGICSLS 436
A + ++E P S L G+ +LS
Sbjct: 664 REAVDFLVELLEKGFVPEFSSLYMLAEGLLTLS 696
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 128/305 (41%), Gaps = 40/305 (13%)
Query: 170 GIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAILLEGWEKEGNAAK 228
GI+ DV N L+ ++C +Q A+ E++ + PD +F +++G+ +EG+
Sbjct: 184 GIKPDVSTFNVLIKALC-RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242
Query: 229 AKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYA 288
A E ++ G S NV + + + + ++E+ L F++ M + D
Sbjct: 243 A-LRIREQMVEFGCSWSNV-SVNVIVHGFCKEGRVEDALNFIQEMSNQD----------- 289
Query: 289 LDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGA 348
G P+ +N ++ C G V +A ++D M+ G
Sbjct: 290 -----------------------GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326
Query: 349 FPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHE 408
PD TYN + L + +V+E +M+ + P + I+ L + E A E
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 409 IWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHA-EDMLDRRIIIYESTMNKLKDAF 467
+ + + P + N+L+ G+C L+R V E+M + E T N L D+
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLC-LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 445
Query: 468 YTEGR 472
++G+
Sbjct: 446 CSKGK 450
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/465 (20%), Positives = 188/465 (40%), Gaps = 37/465 (7%)
Query: 40 PNVSPVARTLCNLLTRTSPPEIETALTS---SGIHPSDDCVREVLKL-----SYNYPHSA 91
PNV + LC L + + L G +PS ++ ++Y +
Sbjct: 335 PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKL 394
Query: 92 VKFFRWAGRLQKHSPHAWNLMVDLLGKN------ELFDPMWDAIRSMKQEGVLTLRTFVS 145
+K G + + +N+++ + + +L D A M GV+ + VS
Sbjct: 395 LKKMVKCGHMPGYV--VYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVS 452
Query: 146 AF-QSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK- 203
+F + C AG++ +A M G D + +L+ +C ++ A FEE+K
Sbjct: 453 SFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC-NASKMELAFLLFEEMKR 511
Query: 204 GKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQI 263
G + D ++ I+++ + K G +A+ F EM R NV+ Y A + L+A ++
Sbjct: 512 GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM--REVGCTPNVVTYTALIHAYLKAKKV 569
Query: 264 EEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMP-------- 315
+ M C P + ++ +D K A +++ M +P
Sbjct: 570 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQ 629
Query: 316 --------NLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKK 367
N++ Y A++ C + V+ A +LLD M + G P+ + Y+ + L + K
Sbjct: 630 YDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK 689
Query: 368 VRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANA 427
+ E + EM ++ +P T ++ I F + A ++ S M+EN P
Sbjct: 690 LDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTE 749
Query: 428 LLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR 472
++ G+C + + E + + M ++ T + D F G+
Sbjct: 750 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 151/410 (36%), Gaps = 61/410 (14%)
Query: 37 LDTPNVSPVARTLCNLLTRTSPPEIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFR 96
L+ NVS R LC+ + + G P +VL N + F
Sbjct: 446 LNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLL 505
Query: 97 WA----GRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYC 151
+ G L + + +MVD K L + M++ G + T+ + +Y
Sbjct: 506 FEEMKRGGLVA-DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564
Query: 152 VAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDG 210
A + + A F+ M + G ++V ++L+ C + Q A + FE + G K PD
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC-KAGQVEKACQIFERMCGSKDVPDV 623
Query: 211 D----------------SFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFL 254
D ++ LL+G+ K +A+ M + + N + YDA +
Sbjct: 624 DMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME--GCEPNQIVYDALI 681
Query: 255 LTLLRASQIEE-----------------------VLRFLKV------------MKDHDCF 279
L + +++E + R+ KV M ++ C
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741
Query: 280 PGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRL 339
P + +T +D K A L M G PN++ Y AMI G+++ L
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 801
Query: 340 LDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSN 389
L+ M G P+ +TY ++ +N + + EM + WP ++
Sbjct: 802 LERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAG 851
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 144/385 (37%), Gaps = 50/385 (12%)
Query: 73 SDDCVREVLKLSYNYPHSAVKFFRWAGRL--QKHSPHAWNLMVDLLGKN----------- 119
S+ V EVL+L P + + FF WAGR KH+ +N +VDL+ ++
Sbjct: 131 SESLVIEVLRLIAR-PSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQ 189
Query: 120 -------ELFDPMWDA-IRSMKQEGVLTL-----------------RTFVSAFQSYCVAG 154
E+F + +R + G ++ T+ Q++ A
Sbjct: 190 QIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKAD 249
Query: 155 RFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFA 214
R + A + M + D + S+ C+ + A+ E PD +
Sbjct: 250 RLDSASLIHREMSLANLRMDGFTLRCFAYSL-CKVGKWREALTLVE--TENFVPDTVFYT 306
Query: 215 ILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMK 274
L+ G + +A M R NV+ Y L L Q+ R L +M
Sbjct: 307 KLISGLCEASLFEEAMDFLNRM--RATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 364
Query: 275 DHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGE-- 332
C+P K F + + D ++A L MV G MP ++YN +IG C + +
Sbjct: 365 MEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSL 424
Query: 333 ----VDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSS 388
+D A + EM+ G + + + +CL K + S EM+ + P +S
Sbjct: 425 NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 484
Query: 389 NCAAAIAMLFDCDDPEAAHEIWSYM 413
+ + L + E A ++ M
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEM 509
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 94/231 (40%), Gaps = 8/231 (3%)
Query: 143 FVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV 202
+ C G+ +EA +M+ G + +VV +++ + T +E E +
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG-MIGKIETCLELLERM 805
Query: 203 KGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRAS 261
K +AP+ ++ +L++ K G A EM + W Y + +
Sbjct: 806 GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK-QTHWPTHTA-GYRKVIEGFNK-- 861
Query: 262 QIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWD--AMVAGGIMPNLIM 319
+ E L L + D P L + +D +K A+ L + A + ++
Sbjct: 862 EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSST 921
Query: 320 YNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRE 370
YN++I C +V+ AF+L EM G P+ ++ + K L RN K+ E
Sbjct: 922 YNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISE 972
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 174/424 (41%), Gaps = 24/424 (5%)
Query: 73 SDDCVREVLKLSY------NYPHSAVKFFRWAGRLQKHSPHAWNLMVDLLGKNELFDPMW 126
S+D V ++L +Y H A R G S A N ++ L + + W
Sbjct: 163 SNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGF--TVSIDACNALIGSLVRIGWVELAW 220
Query: 127 DAIRSMKQEGV----LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLL 182
+ + + GV TL V+A C G+ + + G+ D+V N+L+
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNAL---CKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLI 277
Query: 183 SSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVG 241
S+ + A E + GK +P ++ ++ G K G +AK F EM +R G
Sbjct: 278 SAYS-SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM-LRSG 335
Query: 242 WSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHA 301
S ++ Y + L+ + + E + M+ D P L F+ + +F + + A
Sbjct: 336 LSPDST-TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
Query: 302 IPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKC 361
+ ++++ G++P+ ++Y +I C G + A L +EM+ G D +TYN I
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454
Query: 362 LVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPL 421
L + K + E + F EM + P S I + + A E++ M E ++
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Query: 422 HESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRKDRFDSL 481
+ N LL G + + DM+ + I+ + + L +A ++G
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG-----HLAEA 569
Query: 482 FRRW 485
FR W
Sbjct: 570 FRVW 573
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 140/343 (40%), Gaps = 5/343 (1%)
Query: 112 MVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAF-QSYCVAGRFNEAIMSFDVMDNHG 170
M+ L ++ D S+K+ G++ + Q YC G + A+ + M G
Sbjct: 381 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Query: 171 IEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAK 230
DVV N++L +C + F E + + PD + IL++G K GN A
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAM 500
Query: 231 TTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALD 290
F +M + + +V+ Y+ L + I+ M + P ++ ++
Sbjct: 501 ELFQKM--KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVN 558
Query: 291 VFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFP 350
+ A A +WD M++ I P +++ N+MI C +G + L++M+ G P
Sbjct: 559 ALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVP 618
Query: 351 DSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWP--PTSSNCAAAIAMLFDCDDPEAAHE 408
D ++YN + VR + + + +M + + P + + + + A
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEV 678
Query: 409 IWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDR 451
+ M+E V P + ++ G S +E R ++ML R
Sbjct: 679 VLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/404 (19%), Positives = 162/404 (40%), Gaps = 46/404 (11%)
Query: 107 HAWNLMVDLLGKNELFDPMWDAIRSMKQEGV----LTLRTFVSAFQSYCVAGRFNEAIMS 162
+ N+MV+ L K+ + + + ++++GV +T T +SA+ S G EA
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS---KGLMEEAFEL 292
Query: 163 FDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWE 221
+ M G V N++++ +C + + A E F E ++ ++PD ++ LL
Sbjct: 293 MNAMPGKGFSPGVYTYNTVINGLC-KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEAC 351
Query: 222 KEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPG 281
K+G+ + + F +M R +++ + + + R+ +++ L + +K+ P
Sbjct: 352 KKGDVVETEKVFSDM--RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 282 LKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLD 341
+T + + ++ + A+ L + M+ G +++ YN ++ C + A +L +
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 469
Query: 342 EMVLHGAFPDS-----------------------------------LTYNMIFKCLVRNK 366
EM FPDS +TYN + +
Sbjct: 470 EMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVG 529
Query: 367 KVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESAN 426
+ + +A+MV E PT + + + L A +W M+ ++KP N
Sbjct: 530 DIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICN 589
Query: 427 ALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTE 470
+++ G C S+ E M+ + + N L F E
Sbjct: 590 SMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVRE 633
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 139/339 (41%), Gaps = 16/339 (4%)
Query: 140 LRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFF 199
L F S + +G ++A+M F+ + G+ D V L+ C + S AM
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYC-RKGMISVAMNLR 433
Query: 200 EE-VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLL 258
E ++ A D ++ +L G K +A F EM E + D++ LT+L
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT-------ERALFPDSYTLTIL 486
Query: 259 -----RASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGI 313
+ ++ + + MK+ + + LD F K D A +W MV+ I
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546
Query: 314 MPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETES 373
+P I Y+ ++ C+ G + AFR+ DEM+ P + N + K R+ + ES
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606
Query: 374 FFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENH--VKPLHESANALLIG 431
F +M+ + P + I ++ A + M E + P + N++L G
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHG 666
Query: 432 ICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTE 470
C ++ E M++R + ST + + F ++
Sbjct: 667 FCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQ 705
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 6/247 (2%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
T +C G A+ F M I DVV N+LL + TA E + +
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG-KVGDIDTAKEIWAD 540
Query: 202 VKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
+ K I P S++IL+ +G+ A+A + EM+ + K VM ++ + R+
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK--NIKPTVMICNSMIKGYCRS 598
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMV--AGGIMPNLI 318
+ FL+ M P + + FV+E + + A L M GG++P++
Sbjct: 599 GNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVF 658
Query: 319 MYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEM 378
YN+++ C ++ A +L +M+ G PD TY + V + E EM
Sbjct: 659 TYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Query: 379 VKNEWPP 385
++ + P
Sbjct: 719 LQRGFSP 725
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 3/211 (1%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVM 166
+N ++D GK D + M + +L T ++ + C G EA +D M
Sbjct: 517 TYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEM 576
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGN 225
+ I+ V+ NS++ C N S F E+ + PD S+ L+ G+ +E N
Sbjct: 577 ISKNIKPTVMICNSMIKGYCRSGN-ASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635
Query: 226 AAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFF 285
+KA +M G +V Y++ L R +Q++E L+ M + P +
Sbjct: 636 MSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTY 695
Query: 286 TYALDVFVKENDAAHAIPLWDAMVAGGIMPN 316
T ++ FV +++ A + D M+ G P+
Sbjct: 696 TCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 5/175 (2%)
Query: 180 SLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVI 238
S+L + C + + A ++E+ K I P +++G+ + GNA+ ++ F E +I
Sbjct: 554 SILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES-FLEKMI 612
Query: 239 RVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTY--ALDVFVKEN 296
G+ + ++Y+ + +R + + +K M++ FTY L F ++N
Sbjct: 613 SEGFVPD-CISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 297 DAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPD 351
A + M+ G+ P+ Y MI + + AFR+ DEM+ G PD
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 154/361 (42%), Gaps = 40/361 (11%)
Query: 127 DAIRSMKQEGV-LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSI 185
D R M++ + ++ + S C G F++A+ F+ M+ GI+ DVV +SL+ +
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 186 CCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKE 245
C + A E + I PD +F+ L++ + KEG +AK + EM+ R G + +
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR-GIAPD 349
Query: 246 NVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLW 305
+ Y++ + D F KEN A ++
Sbjct: 350 TI-TYNSLI-----------------------------------DGFCKENCLHEANQMF 373
Query: 306 DAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRN 365
D MV+ G P+++ Y+ +I C VD+ RL E+ G P+++TYN + ++
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 366 KKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESA 425
K+ + F EMV PP+ + L D + A EI+ M ++ +
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493
Query: 426 NALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRKDRFDSLFRRW 485
N ++ G+C+ S+ + + D+ + T N + +G + D LFR+
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA--DMLFRKM 551
Query: 486 K 486
K
Sbjct: 552 K 552
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 168/387 (43%), Gaps = 13/387 (3%)
Query: 105 SPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSF 163
+P +N + + + + +D + + M+ G+ + T YC R + + +F
Sbjct: 69 TPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC---RKKKLLFAF 125
Query: 164 DVMDNH---GIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEG 219
V+ G E D + ++L++ C E + S A+ + V+ K PD + + L+ G
Sbjct: 126 SVLGRAWKLGYEPDTITFSTLVNGFCLE-GRVSEAVALVDRMVEMKQRPDLVTVSTLING 184
Query: 220 WEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCF 279
+G ++A MV G+ + V Y L L ++ L + M++ +
Sbjct: 185 LCLKGRVSEALVLIDRMV-EYGFQPDEV-TYGPVLNRLCKSGNSALALDLFRKMEERNIK 242
Query: 280 PGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRL 339
+ ++ +D K+ A+ L++ M GI +++ Y+++IG CN+G+ D+ ++
Sbjct: 243 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 302
Query: 340 LDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFD 399
L EM+ PD +T++ + V+ K+ E + + EM+ P + + I
Sbjct: 303 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362
Query: 400 CDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYEST 459
+ A++++ MV +P + + L+ C R + R ++ + +I T
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422
Query: 460 MNKLKDAFYTEGR--SRKDRFDSLFRR 484
N L F G+ + K+ F + R
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSR 449
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 111/259 (42%), Gaps = 4/259 (1%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
T+ S +C +EA FD+M + G E D+V + L++S C + + M F E
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC-KAKRVDDGMRLFRE 410
Query: 202 VKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
+ K + P+ ++ L+ G+ + G AK F EMV R +V+ Y L L
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR--GVPPSVVTYGILLDGLCDN 468
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
++ + L + M+ G+ + + + A L+ ++ G+ P+++ Y
Sbjct: 469 GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTY 528
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
N MIG C G + A L +M G PD TYN++ + + + + EM
Sbjct: 529 NVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKV 588
Query: 381 NEWPPTSSNCAAAIAMLFD 399
+ SS I ML D
Sbjct: 589 CGFSADSSTIKMVIDMLSD 607
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 156/359 (43%), Gaps = 17/359 (4%)
Query: 100 RLQKHSPHA--WNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRF 156
R + SP +N+M+ L D + + + T+ T+ ++ + G
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGV 244
Query: 157 NEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFE--EVKGKIAPDGDSFA 214
+EA+ D M + G++ D+ N+++ + C+E A E E+KG PD S+
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGM-CKEGMVDRAFEMVRNLELKG-CEPDVISYN 302
Query: 215 ILLEGWEKEGNAAKAKTTFGEMVIRVGWSKE---NVMAYDAFLLTLLRASQIEEVLRFLK 271
ILL +G K GE ++ +S++ NV+ Y + TL R +IEE + LK
Sbjct: 303 ILLRALLNQG-----KWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLK 357
Query: 272 VMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNG 331
+MK+ P + + F +E AI + M++ G +P+++ YN ++ C NG
Sbjct: 358 LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 417
Query: 332 EVDNAFRLLDEMVLHGAFPDSLTYNMIFKCL-VRNKKVRETESFFAEMVKNEWPPTSSNC 390
+ D A + ++ G P+S +YN +F L K+R EM+ N P
Sbjct: 418 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL-EMMSNGIDPDEITY 476
Query: 391 AAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDML 449
+ I+ L + A E+ M P + N +L+G C R + E M+
Sbjct: 477 NSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMV 535
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 122/305 (40%), Gaps = 7/305 (2%)
Query: 147 FQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEEN--QTSTAMEFFEEVKG 204
F C +G + E++ + M G DV+ L+ N + ME E+
Sbjct: 96 FHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG- 154
Query: 205 KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIE 264
PD ++ L+ G+ K A M R + + Y+ + +L +++
Sbjct: 155 --QPDVFAYNALINGFCKMNRIDDATRVLDRM--RSKDFSPDTVTYNIMIGSLCSRGKLD 210
Query: 265 EVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMI 324
L+ L + +C P + +T ++ + E A+ L D M++ G+ P++ YN +I
Sbjct: 211 LALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 325 GLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWP 384
C G VD AF ++ + L G PD ++YN++ + L+ K E E +M +
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD 330
Query: 385 PTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRH 444
P + I L E A + M E + P S + L+ C R
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 445 AEDML 449
E M+
Sbjct: 391 LETMI 395
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 139/332 (41%), Gaps = 6/332 (1%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
T+ +C + A+ M G E ++V ++SLL+ C + S A+ ++
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYC-HSKRISEAVALVDQ 176
Query: 202 --VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLR 259
V G P+ +F L+ G A++A MV + + +++ Y + L +
Sbjct: 177 MFVTG-YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK--GCQPDLVTYGVVVNGLCK 233
Query: 260 ASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIM 319
+ L M+ PG+ + +D K A+ L+ M GI PN++
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 320 YNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMV 379
Y+++I CN G +A RLL +M+ PD T++ + V+ K+ E E + EMV
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 380 KNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFS 439
K P+ ++ I D + A +++ +MV H P + N L+ G C R
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 440 EVRRHAEDMLDRRIIIYESTMNKLKDAFYTEG 471
E +M R ++ T N L + G
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 112/262 (42%), Gaps = 4/262 (1%)
Query: 139 TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEF 198
++ T+ S +C+ R +EA F+ M + DVV N+L+ C + + ME
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC-KYKRVEEGMEV 418
Query: 199 FEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTL 257
F E+ + + + ++ IL++G + G+ A+ F EMV N+M Y+ L L
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV--SDGVPPNIMTYNTLLDGL 476
Query: 258 LRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNL 317
+ ++E+ + + ++ P + + ++ K L+ + G+ P++
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536
Query: 318 IMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAE 377
+ YN MI C G + A L EM G P+S YN + + +R+ + E
Sbjct: 537 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 596
Query: 378 MVKNEWPPTSSNCAAAIAMLFD 399
M + +S ML D
Sbjct: 597 MRSCGFAGDASTIGLVTNMLHD 618
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 108/274 (39%), Gaps = 6/274 (2%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
TF + ++ G+ EA +D M I+ +V +SL++ C + F
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 202 VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIR--VGWSKENVMAYDAFLLTLLR 259
V PD ++ L++G+ K + F EM R VG N + Y+ + L +
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG----NTVTYNILIQGLFQ 443
Query: 260 ASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIM 319
A + K M P + + LD K A+ +++ + + P +
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 320 YNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMV 379
YN MI C G+V++ + L + L G PD + YN + R E ++ F EM
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 380 KNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYM 413
++ P S I D EA+ E+ M
Sbjct: 564 EDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 137/337 (40%), Gaps = 44/337 (13%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQ----EGVLTLRTFVSAFQSYCVAGRFNEAIMSF 163
+ ++V+ L K D ++ + M+Q GVL T + C ++A+ F
Sbjct: 223 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL---CKYKHMDDALNLF 279
Query: 164 DVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKE 223
M+ GI +VV +SL+S +C + + + ++ KI PD +F+ L++ + KE
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 224 GNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLK 283
G +A+ + EM V + D P +
Sbjct: 340 GKLVEAEKLYDEM-----------------------------------VKRSID--PSIV 362
Query: 284 FFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEM 343
++ ++ F + A +++ MV+ P+++ YN +I C V+ + EM
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Query: 344 VLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDP 403
G +++TYN++ + L + + F EMV + PP + L
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 404 EAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSE 440
E A ++ Y+ + ++P + N ++ G+C + +
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 134/312 (42%), Gaps = 8/312 (2%)
Query: 155 RFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGD-SF 213
+ ++A+ F M ++ + LLS+I + N+ + E+++ P ++
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIA-KMNKFDVVISLGEQMQNLGIPHNHYTY 119
Query: 214 AILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVM 273
+IL+ + + A G+M +++G+ + N++ + L + +I E + + M
Sbjct: 120 SILINCFCRRSQLPLALAVLGKM-MKLGY-EPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 274 KDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEV 333
P F + N A+ A+ L D MVA G P+L+ Y ++ C G+
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 334 DNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAA 393
D AF LL++M P L YN I L + K + + + F EM P ++
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 394 IAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDR-- 451
I+ L + A + S M+E + P + +AL+ + E + ++M+ R
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 452 --RIIIYESTMN 461
I+ Y S +N
Sbjct: 358 DPSIVTYSSLIN 369
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 120/290 (41%), Gaps = 6/290 (2%)
Query: 198 FFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTL 257
F E VK + P F+ LL K N + GE + +G N Y +
Sbjct: 69 FGEMVKSRPFPSIIEFSKLLSAIAKM-NKFDVVISLGEQMQNLGIP-HNHYTYSILINCF 126
Query: 258 LRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNL 317
R SQ+ L L M P + + L+ + + A+ L D M G PN
Sbjct: 127 CRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNT 186
Query: 318 IMYNAMI-GLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFA 376
+ +N +I GL +N + A L+D MV G PD +TY ++ L + +
Sbjct: 187 VTFNTLIHGLFLHN-KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLN 245
Query: 377 EMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLS 436
+M + + P I L + A ++ M ++P + ++L+ +C+
Sbjct: 246 KMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305
Query: 437 RFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR--SRKDRFDSLFRR 484
R+S+ R DM++R+I T + L DAF EG+ + +D + +R
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 136/338 (40%), Gaps = 47/338 (13%)
Query: 139 TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEF 198
++ T S +C RF EA+ D MD G +VV N++++ +C + + F
Sbjct: 148 SIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVF 207
Query: 199 FEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLL 258
+ K I D ++ L+ G G W+
Sbjct: 208 YCMEKKGIRADAVTYNTLISGLSNSGR----------------WT--------------- 236
Query: 259 RASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLI 318
+ R L+ M P + FFT +D FVKE + A L+ M+ ++PN+
Sbjct: 237 ------DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 290
Query: 319 MYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEM 378
YN++I C +G + +A + D MV G FPD +TYN + ++K+V + F EM
Sbjct: 291 TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 350
Query: 379 VKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRF 438
+ I A ++++ MV+ V P + N LL +C+ +
Sbjct: 351 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 410
Query: 439 SEVRRHAEDM----LDRRIIIYESTM------NKLKDA 466
+ ED+ +D II Y + +KLK+A
Sbjct: 411 EKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 448
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 113/276 (40%), Gaps = 37/276 (13%)
Query: 145 SAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG 204
+ C N A+ F M+ GI D V N+L+S + T A + VK
Sbjct: 189 TVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR 248
Query: 205 KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIE 264
KI P+ F L++ + KEGN +A+ + EM+ R NV Y++ + +
Sbjct: 249 KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR--SVVPNVFTYNSLINGFCIHGCLG 306
Query: 265 EVLRFLKVMKDHDCFP--------------------GLKFF---TYA------------L 289
+ +M CFP G+K F TY +
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 290 DVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAF 349
+ + A +++ MV G+ P+++ YN ++ CNNG+++ A +++++
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 350 PDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPP 385
D +TYN+I + L R K++E F + + P
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP 462
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 128/311 (41%), Gaps = 34/311 (10%)
Query: 143 FVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV 202
+ + S C G N A+ FD M+N+GI DVV SL++ +C
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMT 239
Query: 203 KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQ 262
K KI PD +F L++ + KEG A+ + EM IR+ + N+ Y + +
Sbjct: 240 KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM-IRMSIA-PNIFTYTSLINGFCMEGC 297
Query: 263 IEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNA 322
++E + +M+ CFP + +T ++ F K A+ ++ M G+ N I Y
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 323 MIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE 382
+I G+ + A + MV G P+ TYN++ CL N KV++ F +M K E
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417
Query: 383 WPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVR 442
+ N IW+Y N LL G+C + +
Sbjct: 418 MDGVAPN-------------------IWTY-------------NVLLHGLCYNGKLEKAL 445
Query: 443 RHAEDMLDRRI 453
EDM R +
Sbjct: 446 MVFEDMRKREM 456
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 145/351 (41%), Gaps = 19/351 (5%)
Query: 112 MVDLLGKNELFDPMWDAIRSMKQEGV--------LTLRTFVSAFQSYCVAGRFNEAIMSF 163
+++++ K + FD + + ++ GV L + F + Q Y +A F +M
Sbjct: 78 LLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPY-LASSFLGKMMKL 136
Query: 164 DVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEK 222
G E D+V SL++ C N+ AM + V+ I PD + +++ K
Sbjct: 137 ------GFEPDIVTFTSLINGFCL-GNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
Query: 223 EGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGL 282
G+ A + F +M + +V+ Y + + L + + + L+ M P +
Sbjct: 190 NGHVNYALSLFDQM--ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDV 247
Query: 283 KFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDE 342
F +D FVKE A L++ M+ I PN+ Y ++I C G VD A ++
Sbjct: 248 ITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Query: 343 MVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDD 402
M G FPD + Y + + KKV + F EM + + I
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 403 PEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRI 453
P A E++S+MV V P + N LL +C + + EDM R +
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 110/258 (42%), Gaps = 2/258 (0%)
Query: 215 ILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMK 274
+L+ + + A + G+M +++G+ + +++ + + + +++EE + + M
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKM-MKLGF-EPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 275 DHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVD 334
+ P + +T +D K +A+ L+D M GI P+++MY +++ CN+G
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 335 NAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAI 394
+A LL M PD +T+N + V+ K + E + EM++ P + I
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 395 AMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRII 454
+ A +++ M P + +L+ G C + + + +M + +
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 455 IYESTMNKLKDAFYTEGR 472
T L F G+
Sbjct: 350 GNTITYTTLIQGFGQVGK 367
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 114/278 (41%), Gaps = 36/278 (12%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
T+ S +C+ G +EA F +M+ G DVVA SL++ C+ + AM+ F E
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGF-CKCKKVDDAMKIFYE 342
Query: 202 VKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
+ K + + ++ L++G+ + G A+ F MV R N+ Y+ L L
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR--GVPPNIRTYNVLLHCLCYN 400
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
++++ L + M+ +E D G+ PN+ Y
Sbjct: 401 GKVKKALMIFEDMQK------------------REMD--------------GVAPNIWTY 428
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
N ++ C NG+++ A + ++M +TY +I + + + KV+ + F +
Sbjct: 429 NVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPS 488
Query: 381 NEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHV 418
P I+ LF AH ++ M E+ V
Sbjct: 489 KGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 96/250 (38%), Gaps = 2/250 (0%)
Query: 223 EGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGL 282
+GN+ KA +F ++ W + Y L L + Q E L M + P +
Sbjct: 15 KGNSGKA-LSFSRLLDLSFWVRA-FCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSI 72
Query: 283 KFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDE 342
FT L+V K I L D + G+ +L N ++ C + + A L +
Sbjct: 73 IDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGK 132
Query: 343 MVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDD 402
M+ G PD +T+ + ++ E S +MV+ P I L
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH 192
Query: 403 PEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNK 462
A ++ M ++P +L+ G+C+ R+ + M R+I T N
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 463 LKDAFYTEGR 472
L DAF EG+
Sbjct: 253 LIDAFVKEGK 262
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 144/337 (42%), Gaps = 37/337 (10%)
Query: 139 TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEF 198
TL T + C+ G+ ++A++ D M G + + V +L + C+ QT+ AME
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK-VMCKSGQTALAMEL 234
Query: 199 FEEVK-GKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKE------------ 245
+++ KI D ++I+++G K+G+ A F EM I+ G+ +
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK-GFKADIIIYTTLIRGFC 293
Query: 246 ----------------------NVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLK 283
+V+A+ A + ++ ++ E K M P
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 284 FFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEM 343
+T +D F KEN A + D MV+ G PN+ +N +I C +D+ L +M
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 344 VLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDP 403
L G D++TYN + + K+ + F EMV P + + L D +P
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473
Query: 404 EAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSE 440
E A EI+ + ++ ++ N ++ G+C+ S+ +
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 510
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 150/366 (40%), Gaps = 5/366 (1%)
Query: 109 WNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMD 167
++ + ++ + + +D + D + M+ +G+ L T C + + A + +
Sbjct: 75 FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKII 134
Query: 168 NHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNA 226
G E D V ++L++ +C E + S A+E + V+ P + L+ G G
Sbjct: 135 KLGYEPDTVTFSTLINGLCLE-GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKV 193
Query: 227 AKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFT 286
+ A MV G+ + N + Y L + ++ Q + L+ M++ ++
Sbjct: 194 SDAVLLIDRMV-ETGF-QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 287 YALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLH 346
+D K+ +A L++ M G ++I+Y +I C G D+ +LL +M+
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311
Query: 347 GAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAA 406
PD + ++ + C V+ K+RE E EM++ P + + I + + A
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 407 HEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDA 466
+ + MV P + N L+ G C + + M R ++ T N L
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 467 FYTEGR 472
F G+
Sbjct: 432 FCELGK 437
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/361 (20%), Positives = 146/361 (40%), Gaps = 39/361 (10%)
Query: 65 LTSSGIHPSDDCVREVLKLSYNYPHSAVK---FFRWAGRLQKHSPHAWNLMVDLLGKNEL 121
+ +G P++ VLK+ +A+ + R K +++++D L K+
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 122 FDPMWDAIRSMKQEGVLT-LRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNS 180
D ++ M+ +G + + + + +C AGR+++ M I DVVA ++
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 181 LLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMV-- 237
L+ +E + A E +E ++ I+PD ++ L++G+ KE KA MV
Sbjct: 323 LIDCFV-KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 238 -----IRV------GWSKENVM--------------------AYDAFLLTLLRASQIEEV 266
IR G+ K N++ Y+ + ++E
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Query: 267 LRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGL 326
+ M P + + LD + A+ +++ + + ++ +YN +I
Sbjct: 442 KELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHG 501
Query: 327 QCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPT 386
CN +VD+A+ L + L G PD TYN++ L + + E + F +M ++ P
Sbjct: 502 MCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561
Query: 387 S 387
Sbjct: 562 G 562
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 106/261 (40%), Gaps = 39/261 (14%)
Query: 140 LRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFF 199
+RTF YC A ++ + F M G+ D V N+L+ C E + A E F
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC-ELGKLEVAKELF 445
Query: 200 EE-VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLL 258
+E V ++ PD S+ ILL+G G KA F + I + ++ Y+ + +
Sbjct: 446 QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK--IEKSKMELDIGIYNIIIHGMC 503
Query: 259 RASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLI 318
AS++++ A D+F ++PL G+ P++
Sbjct: 504 NASKVDD----------------------AWDLFC-------SLPLK------GVKPDVK 528
Query: 319 MYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEM 378
YN MIG C G + A L +M G P+ TYN++ + + ++ E+
Sbjct: 529 TYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Query: 379 VKNEWPPTSSNCAAAIAMLFD 399
+ + +S + ML D
Sbjct: 589 KRCGFSVDASTVKMVVDMLSD 609
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 157/367 (42%), Gaps = 5/367 (1%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVM 166
+N ++D LG +D + M + G+ TL T+ + A R +A M
Sbjct: 297 TFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM 356
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGN 225
G +V+ N+L+ S E + A+E + + K ++ ++ L++G+ K G
Sbjct: 357 TKKGFPPNVIVYNNLIDSFI-EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 226 AAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFF 285
A A+ EM + +G++ N ++ + + L + LRF+ M + PG
Sbjct: 416 ADNAERLLKEM-LSIGFNV-NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLL 473
Query: 286 TYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVL 345
T + K + A+ LW + G + + NA++ C G++D AFR+ E++
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 346 HGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEA 405
G D ++YN + KK+ E F EMVK P + + I LF+ + E
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 406 AHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKD 465
A + W N + P + + ++ G C R E + ++M+ + + N L
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 466 AFYTEGR 472
A+ GR
Sbjct: 654 AYCRSGR 660
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 128/340 (37%), Gaps = 42/340 (12%)
Query: 143 FVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV 202
F +A ++C G+ EA+ F M+ G+ +VV N+++ +
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL----------------- 305
Query: 203 KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQ 262
G ++F F E ++ G + ++ Y + L RA +
Sbjct: 306 -GMCGRYDEAF------------------MFKEKMVERGM-EPTLITYSILVKGLTRAKR 345
Query: 263 IEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNA 322
I + LK M P + + +D F++ AI + D MV+ G+ YN
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 323 MIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE 382
+I C NG+ DNA RLL EM+ G + ++ + L + F EM+
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 383 WPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVR 442
P I+ L A E+W + ++NALL G+C + E
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 443 RHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRKDRFDSLF 482
R +++L R ++ + N L G K + D F
Sbjct: 526 RIQKEILGRGCVMDRVSYNTL-----ISGCCGKKKLDEAF 560
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 1/199 (0%)
Query: 251 DAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVA 310
+ L +L+RA++ ++ V+ P + FT A++ F K A+ L+ M
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVC-KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 288
Query: 311 GGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRE 370
G+ PN++ +N +I G D AF ++MV G P +TY+++ K L R K++ +
Sbjct: 289 AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGD 348
Query: 371 TESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLI 430
EM K +PP I + A EI MV + + N L+
Sbjct: 349 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 408
Query: 431 GICSLSRFSEVRRHAEDML 449
G C + R ++ML
Sbjct: 409 GYCKNGQADNAERLLKEML 427
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 132/327 (40%), Gaps = 8/327 (2%)
Query: 129 IRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCE 188
+R+M G L L T +S C G+ ++A+ + N G D N+LL +C E
Sbjct: 463 LRNMSPGGGL-LTTLISGL---CKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC-E 517
Query: 189 ENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENV 247
+ A +E+ G+ D S+ L+ G + +A EMV R G +N
Sbjct: 518 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR-GLKPDNY 576
Query: 248 MAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDA 307
Y + L +++EE ++F K + P + ++ +D K +D
Sbjct: 577 -TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635
Query: 308 MVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKK 367
M++ + PN ++YN +I C +G + A L ++M G P+S TY + K + +
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 368 VRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANA 427
V E + F EM P + A I + M +V P +
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 428 LLIGICSLSRFSEVRRHAEDMLDRRII 454
++ G +E R +M ++ I+
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIV 782
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 132/347 (38%), Gaps = 21/347 (6%)
Query: 148 QSYCVAGRFNEAIMSFDV---MDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG 204
+ YC + + ++ DV + N G+ N LL+S+ N+ E F+ V
Sbjct: 196 EVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLV-RANEFQKCCEAFDVVCK 254
Query: 205 KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIE 264
++PD F + + K G +A F +M NV+ ++ + L + +
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM--EEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 265 EVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMI 324
E F + M + P L ++ + + A + M G PN+I+YN +I
Sbjct: 313 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 372
Query: 325 GLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK---- 380
G ++ A + D MV G S TYN + K +N + E EM+
Sbjct: 373 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 381 -NEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFS 439
N+ TS C ++FD +A M+ ++ P L+ G+C + S
Sbjct: 433 VNQGSFTSVICLLCSHLMFD-----SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 487
Query: 440 EVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRKDRFDSLFRRWK 486
+ L++ ++ T N L G + D FR K
Sbjct: 488 KALELWFQFLNKGFVVDTRTSNAL-----LHGLCEAGKLDEAFRIQK 529
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 9/213 (4%)
Query: 149 SYCVAGRFN-----EAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK 203
S + G FN EAI +D +G+ DV + ++ CC+ +T EFF+E+
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG-CCKAERTEEGQEFFDEMM 637
Query: 204 GK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQ 262
K + P+ + L+ + + G + A +M + G S N Y + + + S+
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK-GISP-NSATYTSLIKGMSIISR 695
Query: 263 IEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNA 322
+EE + M+ P + +T +D + K L M + + PN I Y
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 323 MIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTY 355
MIG +G V A RLL+EM G PDS+TY
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 8/219 (3%)
Query: 126 WDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSS 184
WD K+ G+L + T+ C A R E FD M + ++ + V N L+ +
Sbjct: 598 WD---DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA 654
Query: 185 ICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWS 243
C + S A+E E++K K I+P+ ++ L++G +AK F EM R+
Sbjct: 655 YC-RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM--RMEGL 711
Query: 244 KENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIP 303
+ NV Y A + + Q+ +V L+ M + P +T + + ++ + A
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 771
Query: 304 LWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDE 342
L + M GI+P+ I Y I G V AF+ DE
Sbjct: 772 LLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 101/238 (42%), Gaps = 4/238 (1%)
Query: 151 CVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK-GKIAPD 209
C + +EA M D M G++ D + L+ + N+ A++F+++ K + PD
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF-NMNKVEEAIQFWDDCKRNGMLPD 609
Query: 210 GDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRF 269
+++++++G K + + F EM+ + + N + Y+ + R+ ++ L
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSK--NVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 270 LKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCN 329
+ MK P +T + + A L++ M G+ PN+ Y A+I
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727
Query: 330 NGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTS 387
G++ LL EM P+ +TY ++ R+ V E EM + P S
Sbjct: 728 LGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 785
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 124/342 (36%), Gaps = 43/342 (12%)
Query: 138 LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSIC--CEENQTSTA 195
LT T+ + + YC G+ + A M + G V S S IC C +A
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN---VNQGSFTSVICLLCSHLMFDSA 454
Query: 196 MEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFL 254
+ F E+ + ++P G L+ G K G +KA + + + + G+ + + +A L
Sbjct: 455 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK-GFVVDTRTS-NALL 512
Query: 255 LTLLRASQIEEVLRFLKVMKDHDCF-------------------------------PGLK 283
L A +++E R K + C GLK
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 572
Query: 284 FFTYALDVFV----KENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRL 339
Y + + N AI WD G++P++ Y+ MI C +
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 340 LDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFD 399
DEM+ P+++ YN + + R+ ++ +M P S+ + I +
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 692
Query: 400 CDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEV 441
E A ++ M ++P AL+ G L + +V
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 734
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 157/367 (42%), Gaps = 5/367 (1%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVM 166
+N ++D LG +D + M + G+ TL T+ + A R +A M
Sbjct: 297 TFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM 356
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGN 225
G +V+ N+L+ S E + A+E + + K ++ ++ L++G+ K G
Sbjct: 357 TKKGFPPNVIVYNNLIDSFI-EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 226 AAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFF 285
A A+ EM + +G++ N ++ + + L + LRF+ M + PG
Sbjct: 416 ADNAERLLKEM-LSIGFNV-NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLL 473
Query: 286 TYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVL 345
T + K + A+ LW + G + + NA++ C G++D AFR+ E++
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 346 HGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEA 405
G D ++YN + KK+ E F EMVK P + + I LF+ + E
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 406 AHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKD 465
A + W N + P + + ++ G C R E + ++M+ + + N L
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 466 AFYTEGR 472
A+ GR
Sbjct: 654 AYCRSGR 660
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 128/340 (37%), Gaps = 42/340 (12%)
Query: 143 FVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV 202
F +A ++C G+ EA+ F M+ G+ +VV N+++ +
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL----------------- 305
Query: 203 KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQ 262
G ++F F E ++ G + ++ Y + L RA +
Sbjct: 306 -GMCGRYDEAF------------------MFKEKMVERGM-EPTLITYSILVKGLTRAKR 345
Query: 263 IEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNA 322
I + LK M P + + +D F++ AI + D MV+ G+ YN
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 323 MIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE 382
+I C NG+ DNA RLL EM+ G + ++ + L + F EM+
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 383 WPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVR 442
P I+ L A E+W + ++NALL G+C + E
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 443 RHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRKDRFDSLF 482
R +++L R ++ + N L G K + D F
Sbjct: 526 RIQKEILGRGCVMDRVSYNTL-----ISGCCGKKKLDEAF 560
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 1/199 (0%)
Query: 251 DAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVA 310
+ L +L+RA++ ++ V+ P + FT A++ F K A+ L+ M
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVC-KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 288
Query: 311 GGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRE 370
G+ PN++ +N +I G D AF ++MV G P +TY+++ K L R K++ +
Sbjct: 289 AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGD 348
Query: 371 TESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLI 430
EM K +PP I + A EI MV + + N L+
Sbjct: 349 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 408
Query: 431 GICSLSRFSEVRRHAEDML 449
G C + R ++ML
Sbjct: 409 GYCKNGQADNAERLLKEML 427
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 132/327 (40%), Gaps = 8/327 (2%)
Query: 129 IRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCE 188
+R+M G L L T +S C G+ ++A+ + N G D N+LL +C E
Sbjct: 463 LRNMSPGGGL-LTTLISGL---CKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC-E 517
Query: 189 ENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENV 247
+ A +E+ G+ D S+ L+ G + +A EMV R G +N
Sbjct: 518 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR-GLKPDNY 576
Query: 248 MAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDA 307
Y + L +++EE ++F K + P + ++ +D K +D
Sbjct: 577 -TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635
Query: 308 MVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKK 367
M++ + PN ++YN +I C +G + A L ++M G P+S TY + K + +
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 368 VRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANA 427
V E + F EM P + A I + M +V P +
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 428 LLIGICSLSRFSEVRRHAEDMLDRRII 454
++ G +E R +M ++ I+
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIV 782
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 132/347 (38%), Gaps = 21/347 (6%)
Query: 148 QSYCVAGRFNEAIMSFDV---MDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG 204
+ YC + + ++ DV + N G+ N LL+S+ N+ E F+ V
Sbjct: 196 EVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLV-RANEFQKCCEAFDVVCK 254
Query: 205 KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIE 264
++PD F + + K G +A F +M NV+ ++ + L + +
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM--EEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 265 EVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMI 324
E F + M + P L ++ + + A + M G PN+I+YN +I
Sbjct: 313 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 372
Query: 325 GLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK---- 380
G ++ A + D MV G S TYN + K +N + E EM+
Sbjct: 373 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 381 -NEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFS 439
N+ TS C ++FD +A M+ ++ P L+ G+C + S
Sbjct: 433 VNQGSFTSVICLLCSHLMFD-----SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 487
Query: 440 EVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRKDRFDSLFRRWK 486
+ L++ ++ T N L G + D FR K
Sbjct: 488 KALELWFQFLNKGFVVDTRTSNAL-----LHGLCEAGKLDEAFRIQK 529
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 9/213 (4%)
Query: 149 SYCVAGRFN-----EAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK 203
S + G FN EAI +D +G+ DV + ++ CC+ +T EFF+E+
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG-CCKAERTEEGQEFFDEMM 637
Query: 204 GK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQ 262
K + P+ + L+ + + G + A +M + G S N Y + + + S+
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK-GISP-NSATYTSLIKGMSIISR 695
Query: 263 IEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNA 322
+EE + M+ P + +T +D + K L M + + PN I Y
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 323 MIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTY 355
MIG +G V A RLL+EM G PDS+TY
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 8/219 (3%)
Query: 126 WDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSS 184
WD K+ G+L + T+ C A R E FD M + ++ + V N L+ +
Sbjct: 598 WD---DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA 654
Query: 185 ICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWS 243
C + S A+E E++K K I+P+ ++ L++G +AK F EM R+
Sbjct: 655 YC-RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM--RMEGL 711
Query: 244 KENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIP 303
+ NV Y A + + Q+ +V L+ M + P +T + + ++ + A
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 771
Query: 304 LWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDE 342
L + M GI+P+ I Y I G V AF+ DE
Sbjct: 772 LLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 101/238 (42%), Gaps = 4/238 (1%)
Query: 151 CVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK-GKIAPD 209
C + +EA M D M G++ D + L+ + N+ A++F+++ K + PD
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF-NMNKVEEAIQFWDDCKRNGMLPD 609
Query: 210 GDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRF 269
+++++++G K + + F EM+ + + N + Y+ + R+ ++ L
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSK--NVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 270 LKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCN 329
+ MK P +T + + A L++ M G+ PN+ Y A+I
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727
Query: 330 NGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTS 387
G++ LL EM P+ +TY ++ R+ V E EM + P S
Sbjct: 728 LGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 785
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 124/342 (36%), Gaps = 43/342 (12%)
Query: 138 LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSIC--CEENQTSTA 195
LT T+ + + YC G+ + A M + G V S S IC C +A
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN---VNQGSFTSVICLLCSHLMFDSA 454
Query: 196 MEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFL 254
+ F E+ + ++P G L+ G K G +KA + + + + G+ + + +A L
Sbjct: 455 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK-GFVVDTRTS-NALL 512
Query: 255 LTLLRASQIEEVLRFLKVMKDHDCF-------------------------------PGLK 283
L A +++E R K + C GLK
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 572
Query: 284 FFTYALDVFV----KENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRL 339
Y + + N AI WD G++P++ Y+ MI C +
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 340 LDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFD 399
DEM+ P+++ YN + + R+ ++ +M P S+ + I +
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 692
Query: 400 CDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEV 441
E A ++ M ++P AL+ G L + +V
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 734
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 133/293 (45%), Gaps = 37/293 (12%)
Query: 109 WNLMVDLLGKNEL-FDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMS-FDVM 166
+N ++D GK + F + M++ GV R ++ + C G EA + FD M
Sbjct: 306 YNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEM 365
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGN 225
N IE+DV + N+LL +IC + Q A E ++ K I P+ S++ +++G+ K G
Sbjct: 366 TNRRIEQDVFSYNTLLDAIC-KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGR 424
Query: 226 AAKAKTTFGEM------------------VIRVGWS---------------KENVMAYDA 252
+A FGEM +VG S K++V+ Y+A
Sbjct: 425 FDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNA 484
Query: 253 FLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGG 312
L + + +EV + MK P L ++ +D + K A+ ++ + G
Sbjct: 485 LLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG 544
Query: 313 IMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRN 365
+ ++++Y+A+I C NG V +A L+DEM G P+ +TYN I R+
Sbjct: 545 LRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 134/319 (42%), Gaps = 8/319 (2%)
Query: 73 SDDCVREVLKL-SYNYPHSAVKFFRWAGRLQKHSPHAWNL---MVDLLGKNELFDPMWDA 128
SDDC + +L + N AV F+ +A + ++ L M+ LG+
Sbjct: 196 SDDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRI 255
Query: 129 IRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICC 187
+ G T+ F + +Y +G EAI F+ M +G+ ++V N+++ +
Sbjct: 256 FETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGK 315
Query: 188 EENQTSTAMEFFEEV-KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKEN 246
+ +FF+E+ + + PD +F LL + G A+ F EM R +++
Sbjct: 316 GGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR--RIEQD 373
Query: 247 VMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWD 306
V +Y+ L + + Q++ L M P + ++ +D F K A+ L+
Sbjct: 374 VFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFG 433
Query: 307 AMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNK 366
M GI + + YN ++ + G + A +L EM G D +TYN + +
Sbjct: 434 EMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQG 493
Query: 367 KVRETESFFAEMVKNEWPP 385
K E + F EM + P
Sbjct: 494 KYDEVKKVFTEMKREHVLP 512
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 119/277 (42%), Gaps = 5/277 (1%)
Query: 212 SFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRAS-QIEEVLRFL 270
+F+ L+ + + G +A + F M + + N++ Y+A + + + ++V +F
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSM--KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 271 KVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNN 330
M+ + P F L V + A L+D M I ++ YN ++ C
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 331 GEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNC 390
G++D AF +L +M + P+ ++Y+ + + + E + F EM +
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 391 AAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLD 450
+++ E A +I M +K + NALL G ++ EV++ +M
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 451 RRIIIYESTMNKLKDAFYTEGRSRKDRFDSLFRRWKA 487
++ T + L D Y++G K+ + +FR +K+
Sbjct: 508 EHVLPNLLTYSTLIDG-YSKGGLYKEAME-IFREFKS 542
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 119/270 (44%), Gaps = 41/270 (15%)
Query: 109 WNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMD 167
+N ++ GK +D + MK+E VL L T+ + Y G + EA+ F
Sbjct: 482 YNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFK 541
Query: 168 NHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-KGKIAPDGDSFAILLEGWEKEGNA 226
+ G+ DVV ++L+ ++C + +A+ +E+ K I+P+ ++ +++ + +
Sbjct: 542 SAGLRADVVLYSALIDALC-KNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATM 600
Query: 227 AKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDH-------DCF 279
++ +S + + + L+ L ++ V++ + DC
Sbjct: 601 DRS----------ADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCE 650
Query: 280 PGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGL--QCNNGEVDNAF 337
G++ + L+VF K H + I PN++ ++A++ +CN+ E +A
Sbjct: 651 EGMQELSCILEVFRK----MHQLE---------IKPNVVTFSAILNACSRCNSFE--DAS 695
Query: 338 RLLDEMVLHGAFPDSLTYNMIFKCLVRNKK 367
LL+E+ L D+ Y ++ L+ ++
Sbjct: 696 MLLEELRLF----DNKVYGVVHGLLMGQRE 721
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 141/337 (41%), Gaps = 3/337 (0%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVM 166
+N ++D K D + +RSM +G+ L ++ C GR E M
Sbjct: 242 TYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 301
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNA 226
+ G D V N+L+ C E N + E ++ + P ++ L+ K GN
Sbjct: 302 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM 361
Query: 227 AKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFT 286
+A +M +R E Y + + + E R L+ M D+ P + +
Sbjct: 362 NRAMEFLDQMRVRGLCPNER--TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 287 YALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLH 346
++ AI + + M G+ P+++ Y+ ++ C + +VD A R+ EMV
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Query: 347 GAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAA 406
G PD++TY+ + + ++ +E + EM++ PP A I D E A
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 407 HEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRR 443
++ + MVE V P + + L+ G+ SR E +R
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/419 (20%), Positives = 177/419 (42%), Gaps = 59/419 (14%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGV-LTLRTFVSAFQSYCVAGRFNEAIMSFDVM 166
++N++++ L + + + M + G L T+ + + YC G F++A++ M
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGN 225
HG+ V+ SL+ S+C N + AMEF ++++ + + P+ ++ L++G+ ++G
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNM-NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 226 AAKAKTTFGEM---------------------------VIRV-------GWSKENVMAYD 251
+A EM I V G S + V++Y
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD-VVSYS 454
Query: 252 AFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAG 311
L R+ ++E LR + M + P ++ + F ++ A L++ M+
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV 514
Query: 312 GIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRET 371
G+ P+ Y A+I C G+++ A +L +EMV G PD +TY+++ L + + RE
Sbjct: 515 GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574
Query: 372 ESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPE------------------AAHEIWSYM 413
+ ++ E P+ I +C + E A +++ M
Sbjct: 575 KRLLLKLFYEESVPSDVTYHTLIE---NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 631
Query: 414 VENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR 472
+ + KP + N ++ G C + ++M+ +++ T+ L A + EG+
Sbjct: 632 LGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 690
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 157/404 (38%), Gaps = 73/404 (18%)
Query: 139 TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEF 198
T F +SY ++A+ + HG V++ N++L + + S A
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 199 FEE-VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTL 257
F+E ++ +++P+ ++ IL+ G+ GN A T F +M + NV+ Y+ +
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETK--GCLPNVVTYNTLIDGY 250
Query: 258 LRASQIEEVLRFLKVMKDHDCFPGLKFFT--------------------------YALD- 290
+ +I++ + L+ M P L + Y+LD
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
Query: 291 --------VFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDE 342
+ KE + A+ + M+ G+ P++I Y ++I C G ++ A LD+
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 343 MVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPT--------SSNCAA-- 392
M + G P+ TY + + + E EM N + P+ + +C
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 393 ---AIAMLFDCDDPEAAHEIWSY----------------------MVENHVKPLHESANA 427
AIA+L D + + ++ SY MVE +KP + ++
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 428 LLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEG 471
L+ G C R E E+ML + E T L +A+ EG
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 125/325 (38%), Gaps = 53/325 (16%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVM 166
+ +VD + + + +R M G ++ T+ + +CV G+ +AI + M
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 167 DNHGIEKDVVAVNSLLSSIC----------------------------------CEENQT 192
G+ DVV+ +++LS C CE+ +T
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 193 STAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYD 251
A + +EE ++ + PD ++ L+ + EG+ KA EMV + +V+ Y
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK--GVLPDVVTYS 559
Query: 252 AFLLTLLRASQIEEVLRFLKVMKDHDCFPG---------------LKFFTYALDVFVKEN 296
+ L + S+ E R L + + P K + F +
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG 619
Query: 297 DAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYN 356
A ++++M+ P+ YN MI C G++ A+ L EMV G ++T
Sbjct: 620 MMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVI 679
Query: 357 MIFKCLVRNKKVRETESFFAEMVKN 381
+ K L + KV E S ++++
Sbjct: 680 ALVKALHKEGKVNELNSVIVHVLRS 704
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 163/388 (42%), Gaps = 12/388 (3%)
Query: 93 KFFRWAGRLQ--KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEG-VLTLRTFVSAFQS 149
K F+ A ++ K + M++ + FD + + ++ E V+ R+F+ F++
Sbjct: 62 KMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRA 121
Query: 150 YCVAGRFNEAIMSFDVM-DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK--- 205
Y A ++A+ F M D ++ V + NS+L+ I E +EF++ V
Sbjct: 122 YGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVII-NEGLYHRGLEFYDYVVNSNMN 180
Query: 206 --IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQI 263
I+P+G SF ++++ K +A F M R + Y + L + +I
Sbjct: 181 MNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLP--DGYTYCTLMDGLCKEERI 238
Query: 264 EEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAM 323
+E + L M+ C P + +D K+ D L D M G +PN + YN +
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 324 IGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEW 383
I C G++D A LL+ MV P+ +TY + LV+ ++ + + M + +
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 384 PPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRR 443
+ I+ LF E A +W M E KP + L+ G+C + +E +
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 444 HAEDMLDRRIIIYESTMNKLKDAFYTEG 471
M+ + T + L F+ G
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTG 446
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 138/343 (40%), Gaps = 3/343 (0%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVLT-LRTFVSAFQSYCVAGRFNEAIMSFDVM 166
++NL++ L K D + R M + L T+ + C R +EA++ D M
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNA 226
+ G V N L+ +C + + T P+ ++ L+ G +G
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308
Query: 227 AKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFT 286
KA + MV N + Y + L++ + + +R L M++ ++
Sbjct: 309 DKAVSLLERMV--SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYS 366
Query: 287 YALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLH 346
+ KE A A+ LW M G PN+++Y+ ++ C G+ + A +L+ M+
Sbjct: 367 VLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS 426
Query: 347 GAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAA 406
G P++ TY+ + K + E + EM K + I L + A
Sbjct: 427 GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEA 486
Query: 407 HEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDML 449
+WS M+ +KP + ++++ G+C + + +ML
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 121/284 (42%), Gaps = 5/284 (1%)
Query: 105 SPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLR-TFVSAFQSYCVAGRFNEAIMSF 163
SP +N+++D L K + + +M +G + T+ + C+ G+ ++A+
Sbjct: 256 SPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL 315
Query: 164 DVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEK 222
+ M + + V +L++ + ++ + + A+ ++ + + +++L+ G K
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLV-KQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFK 374
Query: 223 EGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGL 282
EG A +A + + +M + K N++ Y + L R + E L M C P
Sbjct: 375 EGKAEEAMSLWRKMAEK--GCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNA 432
Query: 283 KFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDE 342
++ + F K A+ +W M G N Y+ +I C G V A + +
Sbjct: 433 YTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSK 492
Query: 343 MVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPT 386
M+ G PD++ Y+ I K L + + EM+ E P +
Sbjct: 493 MLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKS 536
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 121/305 (39%), Gaps = 16/305 (5%)
Query: 127 DAIR---SMKQEGV-LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLL 182
DA+R SM++ G L + G+ EA+ + M G + ++V + L+
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404
Query: 183 SSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVG 241
+C E + + A E + P+ +++ L++G+ K G +A + EM + G
Sbjct: 405 DGLC-REGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMD-KTG 462
Query: 242 WSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHA 301
S+ N Y + L +++E + M P ++ + A
Sbjct: 463 CSR-NKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAA 521
Query: 302 IPLWDAMVAG---GIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMI 358
+ L+ M+ P+++ YN ++ C ++ A LL+ M+ G PD +T N
Sbjct: 522 LKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTF 581
Query: 359 FKCLV-RNKKVRETESFFAEMVKN--EWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVE 415
L ++ + SF E+V + S C ML P+ + W+ +V
Sbjct: 582 LNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTS--TWAMIVR 639
Query: 416 NHVKP 420
KP
Sbjct: 640 EICKP 644
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 149/339 (43%), Gaps = 40/339 (11%)
Query: 137 VLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAM 196
++TL T V+ C+ G+ ++A++ D M G + + V +L+ + C+ QT+ AM
Sbjct: 193 LITLNTLVNGL---CLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN-VMCKSGQTALAM 248
Query: 197 EFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIR------------VG-- 241
E +++ + I D ++I+++G K+G+ A F EM I+ +G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 242 -----WS--------------KENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGL 282
W NV+ + + + ++ ++ E + LK M P
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 283 KFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDE 342
+ +D F KEN AI + D M++ G P+++ +N +I C +D+ L E
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 343 MVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDD 402
M L G +++TYN + + ++ K+ + F EMV P + + L D +
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 403 PEAAHEIWSYMVENHVKPLHESANALLI-GICSLSRFSE 440
E A EI+ +E L ++I G+C+ S+ +
Sbjct: 489 LEKALEIFGK-IEKSKMELDIGIYMIIIHGMCNASKVDD 526
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 156/366 (42%), Gaps = 5/366 (1%)
Query: 109 WNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMD 167
+N + + K + ++ + + M+ +G+ ++ T +C + + A + +
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM 150
Query: 168 NHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNA 226
G E D V N+LL+ +C E + S A+E + V+ P + L+ G G
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLE-CRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKV 209
Query: 227 AKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFT 286
+ A MV G+ + N + Y L + ++ Q + L+ M++ + ++
Sbjct: 210 SDAVVLIDRMV-ETGF-QPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 287 YALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLH 346
+D K+ +A L++ M G ++I YN +IG CN G D+ +LL +M+
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 347 GAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAA 406
P+ +T++++ V+ K+RE + EM++ P + + I + E A
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 407 HEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDA 466
++ M+ P + N L+ G C +R + +M R +I T N L
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 467 FYTEGR 472
F G+
Sbjct: 448 FCQSGK 453
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 128/301 (42%), Gaps = 9/301 (2%)
Query: 102 QKHSPHA--WNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNE 158
+K SP+ +++++D K ++ M Q G+ T+ S +C R E
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 159 AIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE--VKGKIAPDGDSFAIL 216
AI D+M + G + D++ N L++ C + N+ +E F E ++G IA + ++ L
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYC-KANRIDDGLELFREMSLRGVIA-NTVTYNTL 444
Query: 217 LEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDH 276
++G+ + G AK F EMV R + ++++Y L L ++E+ L ++
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSR--RVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS 502
Query: 277 DCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNA 336
+ + + + A L+ ++ G+ + YN MI C + A
Sbjct: 503 KMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKA 562
Query: 337 FRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAM 396
L +M G PD LTYN++ + + + EM + +P S I M
Sbjct: 563 DILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINM 622
Query: 397 L 397
L
Sbjct: 623 L 623
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 109/273 (39%), Gaps = 4/273 (1%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
TF S+ G+ EA M GI + + NSL+ C +EN+ A++ +
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC-KENRLEEAIQMVDL 393
Query: 202 VKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
+ K PD +F IL+ G+ K F EM +R N + Y+ + ++
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR--GVIANTVTYNTLVQGFCQS 451
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
++E + + M P + + LD + A+ ++ + + ++ +Y
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
+I CN +VD+A+ L + L G D+ YN++ L R + + + F +M +
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571
Query: 381 NEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYM 413
P I DD A E+ M
Sbjct: 572 EGHAPDELTYNILIRAHLGDDDATTAAELIEEM 604
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 2/209 (0%)
Query: 280 PGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRL 339
P F L+ E + A+ L D MV G P LI N ++ C NG+V +A L
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215
Query: 340 LDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFD 399
+D MV G P+ +TY + + ++ + +M + + + I L
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 400 CDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYEST 459
+ A +++ M K + N L+ G C+ R+ + + DM+ R+I T
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 460 MNKLKDAFYTEGRSRKDRFDSLFRRWKAR 488
+ L D+F EG+ R+ D L + R
Sbjct: 336 FSVLIDSFVKEGKLREA--DQLLKEMMQR 362
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 133/300 (44%), Gaps = 4/300 (1%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
TF + + + +EA+ D M G + D+ ++++ +C + A+ ++
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC-KRGDIDLALSLLKK 245
Query: 202 V-KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
+ KGKI D + +++ N A F EM + + NV+ Y++ + L
Sbjct: 246 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK--GIRPNVVTYNSLIRCLCNY 303
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
+ + R L M + P + F+ +D FVKE A L+D M+ I P++ Y
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
+++I C + +D A + + M+ FP+ +TYN + K + K+V E F EM +
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 381 NEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSE 440
+ I LF D + A +I+ MV + V P + + LL G+C + +
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 135/323 (41%), Gaps = 4/323 (1%)
Query: 150 YCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-KGKIAP 208
+C + A+ M G E D+V ++SLL+ C + S A+ +++ + P
Sbjct: 125 FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYC-HGKRISEAVALVDQMFVMEYQP 183
Query: 209 DGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLR 268
+ +F L+ G A++A MV R + ++ Y + L + I+ L
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVAR--GCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 269 FLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQC 328
LK M+ + +T +D + A+ L+ M GI PN++ YN++I C
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 329 NNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSS 388
N G +A RLL +M+ P+ +T++ + V+ K+ E E + EM+K P
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 389 NCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDM 448
++ I D + A ++ M+ P + N L+ G C R E +M
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 449 LDRRIIIYESTMNKLKDAFYTEG 471
R ++ T N L + G
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAG 444
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 159/380 (41%), Gaps = 34/380 (8%)
Query: 38 DTPNVSPVARTLCNLLTRTSPPEIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRW 97
D + + LCN + T + + GI P+ +++ NY RW
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG-------RW 306
Query: 98 --AGRL------QKHSPHA--WNLMVD-------LLGKNELFDPMWDAIRSMKQEGVLTL 140
A RL +K +P+ ++ ++D L+ +L+D M RS+ + +
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK--RSIDPD----I 360
Query: 141 RTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFE 200
T+ S +C+ R +EA F++M + +VV N+L+ C + + ME F
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC-KAKRVEEGMELFR 419
Query: 201 EVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLR 259
E+ + + + ++ L++G + G+ A+ F +MV +++ Y L L +
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV--SDGVPPDIITYSILLDGLCK 477
Query: 260 ASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIM 319
++E+ L + ++ P + + ++ K L+ ++ G+ PN+I+
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 537
Query: 320 YNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMV 379
Y MI C G + A L EM G P+S TYN + + +R+ + EM
Sbjct: 538 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 597
Query: 380 KNEWPPTSSNCAAAIAMLFD 399
+ +S + I ML D
Sbjct: 598 SCGFVGDASTISMVINMLHD 617
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 118/268 (44%), Gaps = 10/268 (3%)
Query: 226 AAKAKTTFGEMVIRVGWSKENV-MAYDAFLLTLL-----RASQIEEVLRFLKVMKDHDCF 279
+A AK ++VI +G +N+ ++YD + +L R SQ+ L L M
Sbjct: 88 SAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYE 147
Query: 280 PGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMI-GLQCNNGEVDNAFR 338
P + + L+ + + A+ L D M PN + +N +I GL +N + A
Sbjct: 148 PDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHN-KASEAVA 206
Query: 339 LLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLF 398
L+D MV G PD TY + L + + S +M K + I L
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 266
Query: 399 DCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYES 458
+ + A +++ M ++P + N+L+ +C+ R+S+ R DM++R+I
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 326
Query: 459 TMNKLKDAFYTEGR--SRKDRFDSLFRR 484
T + L DAF EG+ + +D + +R
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 110/271 (40%), Gaps = 7/271 (2%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
TF + ++ G+ EA +D M I+ D+ +SL++ C + F
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 202 VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIR--VGWSKENVMAYDAFLLTLLR 259
+ P+ ++ L++G+ K + F EM R VG N + Y+ + L +
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG----NTVTYNTLIQGLFQ 442
Query: 260 ASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIM 319
A + + K M P + ++ LD K A+ +++ + + P++
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 320 YNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMV 379
YN MI C G+V++ + L + L G P+ + Y + R E ++ F EM
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 380 KNEWPPTSSNCAAAI-AMLFDCDDPEAAHEI 409
++ P S I A L D D +A I
Sbjct: 563 EDGTLPNSGTYNTLIRARLRDGDKAASAELI 593
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 168/385 (43%), Gaps = 8/385 (2%)
Query: 75 DCVREVLKLSYNYPHSAVKFFRWAGRLQ--KHSPHAWNLMVDLLGKNELFDPMWDAIRSM 132
+ V VLK + PH A++FF W + H +N M+ + G+ D + + + M
Sbjct: 156 EIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEM 215
Query: 133 KQEGV-LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQ 191
++ G +RT+ Y A + + ++ F+ M G E D A N ++ S+C +
Sbjct: 216 EKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIA-GR 274
Query: 192 TSTAMEFFEEVKGKIAPDG-DSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAY 250
A+EF++E+ K G ++ +LL+ K ++ +MV S+ + Y
Sbjct: 275 GDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGY 334
Query: 251 DAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVA 310
L + + +I+E L ++ +K+ + K+F + + N A+ + D M
Sbjct: 335 --LLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKR 392
Query: 311 GGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRE 370
+ + + Y +I +V A + + G P TY I + L + K+ +
Sbjct: 393 RKLDDSNV-YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEK 451
Query: 371 TESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLI 430
+ F EM++N P S A +A + A +++S M E +KP +S + +
Sbjct: 452 GCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVK 511
Query: 431 GICSLSRFSEVRRHAEDMLDRRIII 455
+C SR+ E+ + M +I+I
Sbjct: 512 ELCRSSRYDEIIKIFNQMHASKIVI 536
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 161/395 (40%), Gaps = 48/395 (12%)
Query: 40 PNVSPV----ARTLCNLLTRTSPPE-IETALTSSGIHPSDDCVREVLKLSYNYPHSAVKF 94
P +S V + +C +L+ + E + AL S + + + V EVL+ + ++ ++F
Sbjct: 605 PALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRF 664
Query: 95 FRWAGRLQ--KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYC 151
F W G+ KH+ A+N+ + + G + F M M+++G L T T+ Y
Sbjct: 665 FSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYG 724
Query: 152 VAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEE--NQTSTAMEFFEEVKGKIAPD 209
G N AI +F M + G+ L++ +C ++ N F E ++ PD
Sbjct: 725 RTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPD 784
Query: 210 GDSFAILLEGWEKEGNAAKAKTTFGEM-----------------VIRVGWSKE------- 245
+ L + GN AK+ + + R+G +E
Sbjct: 785 RELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSELAS 844
Query: 246 --------NVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKEND 297
+ Y + + LL+ +++ L + MK+ PG+ +T + F KE
Sbjct: 845 FEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQ 904
Query: 298 AAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVD---NAFRLLDEMVLHGAFPDSLT 354
+ M P+++ Y AMI + G+V+ NAFR ++E G PD T
Sbjct: 905 LEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEE---RGTSPDFKT 961
Query: 355 YNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSN 389
Y+ CL + K + +EM+ P++ N
Sbjct: 962 YSKFINCLCQACKSEDALKLLSEMLDKGIAPSTIN 996
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 147/338 (43%), Gaps = 38/338 (11%)
Query: 137 VLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAM 196
++T+ T V+ C++G+ EA++ D M +G + + V +L+ + C+ QT+ AM
Sbjct: 193 LITINTLVNGL---CLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN-VMCKSGQTALAM 248
Query: 197 EFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIR------------VG-- 241
E +++ + I D ++I+++G K G+ A F EM ++ +G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 242 -----WS--------------KENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGL 282
W NV+ + + + ++ ++ E K M P
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 283 KFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDE 342
+T +D F KEN A + D MV+ G PN+ +N +I C +D+ L +
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 343 MVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDD 402
M L G D++TYN + + K+ + F EMV + PP + L D +
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 403 PEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSE 440
E A EI+ + ++ ++ N ++ G+C+ S+ +
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 526
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 152/359 (42%), Gaps = 5/359 (1%)
Query: 116 LGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKD 174
+ K + +D + + M+ +G+ L T +C + A + + G E +
Sbjct: 98 IAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPN 157
Query: 175 VVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTF 233
+ ++L++ +C E + S A+E + V+ PD + L+ G G A+A
Sbjct: 158 TITFSTLINGLCLE-GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 234 GEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFV 293
+MV G + N + Y L + ++ Q + L+ M++ + ++ +D
Sbjct: 217 DKMV-EYG-CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 294 KENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSL 353
K +A L++ M GI N+I YN +IG CN G D+ +LL +M+ P+ +
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 354 TYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYM 413
T++++ V+ K+RE E EM+ P + + I + + A+++ M
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 414 VENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR 472
V P + N L+ G C +R + M R ++ T N L F G+
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 109/261 (41%), Gaps = 39/261 (14%)
Query: 140 LRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFF 199
+RTF YC A R ++ + F M G+ D V N+L+ C E + + A E F
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC-ELGKLNVAKELF 461
Query: 200 EE-VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLL 258
+E V K+ P+ ++ ILL+G G + KA F + I + ++ Y+ + +
Sbjct: 462 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK--IEKSKMELDIGIYNIIIHGMC 519
Query: 259 RASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLI 318
AS++++ A D+F ++PL G+ P +
Sbjct: 520 NASKVDD----------------------AWDLFC-------SLPLK------GVKPGVK 544
Query: 319 MYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEM 378
YN MIG C G + A L +M G PD TYN++ + + + ++ E+
Sbjct: 545 TYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Query: 379 VKNEWPPTSSNCAAAIAMLFD 399
+ + +S I ML D
Sbjct: 605 KRCGFSVDASTIKMVIDMLSD 625
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 129/314 (41%), Gaps = 40/314 (12%)
Query: 109 WNLMVDLLGKNELFDPMWDAIRSMKQEGVLT-LRTFVSAFQSYCVAGRFNEAIMSFDVMD 167
+++++D L K+ D ++ M+ +G+ T + T+ +C AGR+++ M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 168 NHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNA 226
I +VV + L+ S +E + A E +E + IAPD ++ L++G+ KE +
Sbjct: 326 KRKINPNVVTFSVLIDSFV-KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384
Query: 227 AKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFT 286
KA MV + N+ ++ + +A++I++ L + M +
Sbjct: 385 DKANQMVDLMVSK--GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 442
Query: 287 YALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGE-------------- 332
+ F + A L+ MV+ + PN++ Y ++ C+NGE
Sbjct: 443 TLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS 502
Query: 333 ---------------------VDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRET 371
VD+A+ L + L G P TYN++ L + + E
Sbjct: 503 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 562
Query: 372 ESFFAEMVKNEWPP 385
E F +M ++ P
Sbjct: 563 ELLFRKMEEDGHAP 576
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 95/264 (35%), Gaps = 35/264 (13%)
Query: 247 VMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWD 306
V+ + + + Q + VL K M+ L + ++ F + A
Sbjct: 88 VIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMG 147
Query: 307 AMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNK 366
++ G PN I ++ +I C G V A L+D MV G PD +T N + L +
Sbjct: 148 KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG 207
Query: 367 KVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVK------- 419
K E +MV+ P + + ++ A E+ M E ++K
Sbjct: 208 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 420 ------PLHESA----------------------NALLIGICSLSRFSEVRRHAEDMLDR 451
H S N L+ G C+ R+ + + DM+ R
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 452 RIIIYESTMNKLKDAFYTEGRSRK 475
+I T + L D+F EG+ R+
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLRE 351
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 157/378 (41%), Gaps = 26/378 (6%)
Query: 103 KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQ-------EGVLTLRTFVSAFQSYCVAGR 155
KH+ + +++ LG F+ M + + M++ EGV +V A ++Y G+
Sbjct: 37 KHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGV-----YVGAMKNYGRKGK 91
Query: 156 FNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFA 214
EA+ F+ MD + E V + N+++S + + A + + ++ + I PD SF
Sbjct: 92 VQEAVNVFERMDFYDCEPTVFSYNAIMS-VLVDSGYFDQAHKVYMRMRDRGITPDVYSFT 150
Query: 215 ILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMK 274
I ++ + K A M + + NV+AY + + E M
Sbjct: 151 IRMKSFCKTSRPHAALRLLNNMSSQ--GCEMNVVAYCTVVGGFYEENFKAEGYELFGKML 208
Query: 275 DHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVD 334
L F L V K+ D L D ++ G++PNL YN I C GE+D
Sbjct: 209 ASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELD 268
Query: 335 NAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAI 394
A R++ ++ G PD +TYN + L +N K +E E + +MV P S I
Sbjct: 269 GAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328
Query: 395 AMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGIC-------SLSRFSEVRRHAED 447
A + A I V N P + +L+ G+C +L+ F+E
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG-- 386
Query: 448 MLDRRIIIYESTMNKLKD 465
+ +I+Y + + L +
Sbjct: 387 -IKPNVILYNTLIKGLSN 403
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 136/333 (40%), Gaps = 19/333 (5%)
Query: 96 RWAGRLQKHSPH----AWNLMVDLLGKNELFDPMWDAIRSMKQEGV----LTLRTFVSAF 147
R G L + P +N ++ L KN F + M EG+ T T ++
Sbjct: 272 RMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG- 330
Query: 148 QSYCVAG--RFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK 205
YC G + E I+ V + G D SL+ +C E +T+ A+ F E GK
Sbjct: 331 --YCKGGMVQLAERIVGDAVFN--GFVPDQFTYRSLIDGLC-HEGETNRALALFNEALGK 385
Query: 206 -IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIE 264
I P+ + L++G +G +A EM + G E V ++ + L + +
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEK-GLIPE-VQTFNILVNGLCKMGCVS 443
Query: 265 EVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMI 324
+ +KVM FP + F + + + +A+ + D M+ G+ P++ YN+++
Sbjct: 444 DADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLL 503
Query: 325 GLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWP 384
C + ++ MV G P+ T+N++ + L R +K+ E EM
Sbjct: 504 NGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVN 563
Query: 385 PTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENH 417
P + I D + A+ ++ M E +
Sbjct: 564 PDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 145/393 (36%), Gaps = 56/393 (14%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEG----VLTLRTFVSAFQSYCVAGRFNEAIMSF 163
+NL + L + D + + ++G V+T + C +F EA +
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGL---CKNSKFQEAEVYL 309
Query: 164 DVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-----KIAPDGDSFAILLE 218
M N G+E D N+L++ C ++ E + G PD ++ L++
Sbjct: 310 GKMVNEGLEPDSYTYNTLIAGYC-----KGGMVQLAERIVGDAVFNGFVPDQFTYRSLID 364
Query: 219 GWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDC 278
G EG +A F E + + K NV+ Y+ + L I E + M +
Sbjct: 365 GLCHEGETNRALALFNEALGK--GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Query: 279 FPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFR 338
P ++ F ++ K + A L M++ G P++ +N +I +++NA
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 482
Query: 339 LLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLF 398
+LD M+ +G PD TYN + L + K
Sbjct: 483 ILDVMLDNGVDPDVYTYNSLLNGLCKTSKF------------------------------ 512
Query: 399 DCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYES 458
E E + MVE P + N LL +C + E E+M ++ +
Sbjct: 513 -----EDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAV 567
Query: 459 TMNKLKDAFYTEGRSRKDRFDSLFRRWKARVKL 491
T L D F G D +LFR+ + K+
Sbjct: 568 TFGTLIDGFCKNGDL--DGAYTLFRKMEEAYKV 598
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 138/386 (35%), Gaps = 77/386 (19%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
T+ S C G N A+ F+ GI+ +V+ N+L+ + + A E
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Query: 202 VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRV-------------GWSKE--- 245
+ + P+ +F IL+ G K G + A M+ + G+S +
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477
Query: 246 -----------------NVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYA 288
+V Y++ L L + S+ E+V+ K M + C P L F
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 289 LDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAF----------- 337
L+ + A+ L + M + P+ + + +I C NG++D A+
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 338 -------------------------RLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETE 372
+L EMV PD TY ++ + V
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Query: 373 SFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGI 432
F EM++N + P+ + I L D A I MV+ + P E+ N I
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP--EAVNT----I 711
Query: 433 CSLSR--FSEVRRHAEDMLDRRIIIY 456
C + + + + ED+L + I Y
Sbjct: 712 CDVDKKEVAAPKLVLEDLLKKSCITY 737
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 113/302 (37%), Gaps = 52/302 (17%)
Query: 107 HAWNLMVDLLGKNELFDPMWDAIRSMKQEGV-LTLRTFVSAFQSYCVAGRFNEAIMSFDV 165
H ++ + + E+ D M D GV + T+ S C +F + + ++
Sbjct: 469 HGYSTQLKMENALEILDVMLD-------NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 166 MDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEG 224
M G ++ N LL S+C + A+ EE+K K + PD +F L++G+ K G
Sbjct: 522 MVEKGCAPNLFTFNILLESLC-RYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG 580
Query: 225 NAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKF 284
+ A T F +M EE + ++ +
Sbjct: 581 DLDGAYTLFRKM---------------------------EEAYKVSSSTPTYNII--IHA 611
Query: 285 FTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMV 344
FT L+V + E L+ MV + P+ Y M+ C G V+ ++ L EM+
Sbjct: 612 FTEKLNVTMAEK-------LFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMM 664
Query: 345 LHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPE 404
+G P T + CL +V E MV+ P A+ + D D E
Sbjct: 665 ENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP------EAVNTICDVDKKE 718
Query: 405 AA 406
A
Sbjct: 719 VA 720
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/470 (21%), Positives = 194/470 (41%), Gaps = 32/470 (6%)
Query: 45 VARTLCNLLTRTSPPEIETALTSSGIHPSDDCVREVLKLS----YNYPHSAVKFFRWAGR 100
+A+++C + + + I SG+ S + + +LS Y P + FF W
Sbjct: 13 IAQSICATVLKGNWKNILKHKVDSGLLKSAITTQVISELSLFSGYGGPSLSWSFFIWTDS 72
Query: 101 L--QKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLT----LRTFVSAFQS----- 149
L KHS + M+ +L K++ F + + Q +L+ LR+ V
Sbjct: 73 LPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDV 132
Query: 150 ----------YCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFF 199
Y AG N++I+ F+ + + G++ + A LL+S+ ++ T T + F
Sbjct: 133 SHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLV-KQRLTDTVWKIF 191
Query: 200 EE-VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLL 258
++ VK + + + +L+ K G+ KA+ EM + + ++ Y+ +
Sbjct: 192 KKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFP--DIFTYNTLISVYC 249
Query: 259 RASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLI 318
+ S E L M+ P + + + F +E A L+ + + N +
Sbjct: 250 KKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHV 308
Query: 319 MYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEM 378
Y +I C ++D A RL + M G P +TYN I + L + ++RE EM
Sbjct: 309 TYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM 368
Query: 379 VKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRF 438
+ P + C I +D +A ++ M+E+ +K S AL+ G C +
Sbjct: 369 SGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLEL 428
Query: 439 SEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRKDRFDSLFRRWKAR 488
+ M+++ +T + L D FY + +++D L ++ R
Sbjct: 429 ENAKEELFSMIEKGFSPGYATYSWLVDGFYNQ--NKQDEITKLLEEFEKR 476
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 104/250 (41%), Gaps = 4/250 (1%)
Query: 130 RSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEE 189
R +K + T+ + YC +EA+ +VM++ G VV NS+L +C E+
Sbjct: 297 REIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLC-ED 355
Query: 190 NQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVM 248
+ A E+ GK I PD + L+ + K + A +M I G K ++
Sbjct: 356 GRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKM-IESGL-KLDMY 413
Query: 249 AYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAM 308
+Y A + + ++E L M + PG +++ +D F +N L +
Sbjct: 414 SYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEF 473
Query: 309 VAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKV 368
G+ ++ +Y +I C +VD A L + M G DS+ + + R KV
Sbjct: 474 EKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKV 533
Query: 369 RETESFFAEM 378
E + F M
Sbjct: 534 TEASALFDVM 543
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 114/488 (23%), Positives = 205/488 (42%), Gaps = 63/488 (12%)
Query: 43 SPVARTLCNLLTRTSPPEIETALTSSGIHPSDDCVR----EVLKLSYNYPHSAVKFFRW- 97
S +AR+L + ++P E + S +HPS R + L+L P ++FF W
Sbjct: 34 SKLARSLARAVN-SNPWSDELESSLSSLHPSQTISRTTVLQTLRL-IKVPADGLRFFDWV 91
Query: 98 AGRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSM--KQEGVLTL--RTFVSAFQSYCVA 153
+ + H ++ LM++ LG+ + + + S+ + G + L R F S +SY A
Sbjct: 92 SNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNA 151
Query: 154 GRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK--IAPDGD 211
G F E++ F M GI V+ NSLL SI + +T A + F+E++ + PD
Sbjct: 152 GLFQESVKLFQTMKQMGISPSVLTFNSLL-SILLKRGRTGMAHDLFDEMRRTYGVTPDSY 210
Query: 212 SFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLK 271
+F L+ G+ K +A F +M + +V+ Y+ + L RA +++ L
Sbjct: 211 TFNTLINGFCKNSMVDEAFRIFKDM--ELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLS 268
Query: 272 VM--KDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMI-GL-- 326
M K D P + +T + + + + A+ ++ M++ G+ PN + YN +I GL
Sbjct: 269 GMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSE 328
Query: 327 ----------------------------------QCNNGEVDNAFRLLDEMVLHGAFPDS 352
C+ G +D A ++ EM+ PDS
Sbjct: 329 AHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDS 388
Query: 353 LTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNC---AAAIAMLFD--CDD--PEA 405
+Y+++ + L + E+ F E+ + E C AAA +F+ C + +
Sbjct: 389 ASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQ 448
Query: 406 AHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKD 465
A +++ +++ V+ S L+ G C +F ML R + T L D
Sbjct: 449 AEKVFRQLMKRGVQD-PPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLID 507
Query: 466 AFYTEGRS 473
G +
Sbjct: 508 GLLKIGEA 515
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 180/442 (40%), Gaps = 18/442 (4%)
Query: 48 TLCNLLTRTS---PPEIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGRLQKH 104
T+ NLL T +E+AL +GI PS + V + + P F+WA
Sbjct: 72 TISNLLENTDVVPGSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGF 131
Query: 105 --SPHAWNLMVDLLGKNELFDPMW----DAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNE 158
SP ++ +V+ L K F+ W D +RS + +++ TF+ + Y AG +
Sbjct: 132 TLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQ 191
Query: 159 AIMSFDVMDNH-GIEKDVVAVNSL--LSSICCEENQTSTAMEFFEEVKGKI----APDGD 211
AI +F+ ++ + K + L L C+E A + E + G + P
Sbjct: 192 AIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVR 251
Query: 212 SFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLK 271
F ILL GW + +A+ + EM + K V+ Y + R +++ + L+
Sbjct: 252 IFNILLNGWFRSRKLKQAEKLWEEM--KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLE 309
Query: 272 VMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNG 331
MK + F +D + + A+ + + P ++ YN+++ C G
Sbjct: 310 EMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAG 369
Query: 332 EVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCA 391
++ A ++L M+ G P + TYN FK ++ K E + + ++++ P
Sbjct: 370 DLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYH 429
Query: 392 AAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDR 451
+ ML + A ++ M + P + L+ +C L E ++ + R
Sbjct: 430 LILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRR 489
Query: 452 RIIIYESTMNKLKDAFYTEGRS 473
II T + + ++G S
Sbjct: 490 GIIPQYITFKMIDNGLRSKGMS 511
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 131/294 (44%), Gaps = 4/294 (1%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
TF + + + +EA+ D M G + ++V +++ +C + T A+ +
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC-KRGDTDLALNLLNK 250
Query: 202 VKG-KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
++ KI D F +++ K + A F EM + + NV+ Y + + L
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK--GIRPNVVTYSSLISCLCSY 308
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
+ + + L M + P L F +D FVKE A L+D M+ I P++ Y
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 368
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
N+++ C + +D A ++ + MV FPD +TYN + K ++K+V + F EM
Sbjct: 369 NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH 428
Query: 381 NEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICS 434
+ I LF D + A +++ MV + V P + + LL G+C+
Sbjct: 429 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 482
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 142/329 (43%), Gaps = 2/329 (0%)
Query: 143 FVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV 202
F + S C ++A+ F M+ GI +VV +SL+S +C + + + +
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 203 KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQ 262
+ KI P+ +F L++ + KEG +A+ + +M+ R ++ Y++ + +
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR--SIDPDIFTYNSLVNGFCMHDR 380
Query: 263 IEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNA 322
+++ + + M DCFP + + + F K L+ M G++ + + Y
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 323 MIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE 382
+I ++G+ DNA ++ +MV G PD +TY+++ L N K+ + F M K+E
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 383 WPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVR 442
I + + +++ + VKP + N ++ G+CS E
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560
Query: 443 RHAEDMLDRRIIIYESTMNKLKDAFYTEG 471
+ M + + T N L A +G
Sbjct: 561 ALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 151/365 (41%), Gaps = 5/365 (1%)
Query: 109 WNLMVDLLGKNELFDPMWDAIRSMKQ-EGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMD 167
+N ++ + K + FD + M++ E V L T+ +C + + A+ M
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 168 NHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNA 226
G E +V ++SLL+ C + S A+ ++ V+ PD +F L+ G A
Sbjct: 148 KLGYEPSIVTLSSLLNGY-CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 227 AKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFT 286
++A MV R + N++ Y + L + + L L M+ + F
Sbjct: 207 SEAVALVDRMVQR--GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264
Query: 287 YALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLH 346
+D K A+ L+ M GI PN++ Y+++I C+ G +A +LL +M+
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Query: 347 GAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAA 406
P+ +T+N + V+ K E E + +M+K P + + D + A
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 407 HEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDA 466
+++ +MV P + N L+ G C R + +M R ++ T L
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444
Query: 467 FYTEG 471
+ +G
Sbjct: 445 LFHDG 449
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 110/259 (42%), Gaps = 4/259 (1%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
T+ S +C+ R ++A F+ M + DVV N+L+ C + + E F E
Sbjct: 367 TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC-KSKRVEDGTELFRE 425
Query: 202 VKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
+ + + D ++ L++G +G+ A+ F +MV ++M Y L L
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV--SDGVPPDIMTYSILLDGLCNN 483
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
++E+ L M+ + + +T ++ K L+ ++ G+ PN++ Y
Sbjct: 484 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
N MI C+ + A+ LL +M G P+S TYN + + +R+ + EM
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Query: 381 NEWPPTSSNCAAAIAMLFD 399
+ +S ML D
Sbjct: 604 CRFVGDASTIGLVANMLHD 622
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 134/328 (40%), Gaps = 12/328 (3%)
Query: 155 RFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEEN-----QTSTAMEFFEEVKGKIAPD 209
+ ++AI F M +V N LLS+I + M+ E V G
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY--- 121
Query: 210 GDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRF 269
++ IL+ + + + A G+M +++G+ + +++ + L +I + +
Sbjct: 122 --TYNILINCFCRRSQISLALALLGKM-MKLGY-EPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 270 LKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCN 329
+ M + P FT + N A+ A+ L D MV G PNL+ Y ++ C
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 330 NGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSN 389
G+ D A LL++M D + +N I L + + V + + F EM P
Sbjct: 238 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 297
Query: 390 CAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDML 449
++ I+ L A ++ S M+E + P + NAL+ +F E + +DM+
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Query: 450 DRRIIIYESTMNKLKDAFYTEGRSRKDR 477
R I T N L + F R K +
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 108/271 (39%), Gaps = 3/271 (1%)
Query: 140 LRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFF 199
L TF + ++ G+F EA +D M I+ D+ NSL++ C + F
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Query: 200 EEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLR 259
V PD ++ L++G+ K F EM R G + V Y + L
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR-GLVGDTV-TYTTLIQGLFH 447
Query: 260 ASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIM 319
+ + K M P + ++ LD A+ ++D M I ++ +
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Query: 320 YNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMV 379
Y MI C G+VD+ + L + L G P+ +TYN + L + ++E + +M
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Query: 380 KNEWPPTSSNCAAAI-AMLFDCDDPEAAHEI 409
++ P S I A L D D +A I
Sbjct: 568 EDGPLPNSGTYNTLIRAHLRDGDKAASAELI 598
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 132/300 (44%), Gaps = 4/300 (1%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
TF + + + +EA+ D M G + D+V ++++ +C + A+ ++
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC-KRGDIDLALSLLKK 248
Query: 202 V-KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
+ KGKI D + +++G K + A F EM + + +V Y + + L
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK--GIRPDVFTYSSLISCLCNY 306
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
+ + R L M + P + F+ +D FVKE A L+D M+ I P++ Y
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
+++I C + +D A + + M+ FP+ +TY+ + K + K+V E F EM +
Sbjct: 367 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQ 426
Query: 381 NEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSE 440
+ I F D + A ++ MV V P + N LL G+C + ++
Sbjct: 427 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 486
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 124/283 (43%), Gaps = 2/283 (0%)
Query: 151 CVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDG 210
C ++A+ F MDN GI DV +SL+S +C + + + ++ KI P+
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 211 DSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFL 270
+F+ L++ + KEG +A+ + EM+ R ++ Y + + +++E
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 271 KVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNN 330
++M DCFP + ++ + F K + L+ M G++ N + Y +I
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 446
Query: 331 GEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNC 390
+ DNA + +MV G P+ LTYN++ L +N K+ + F + ++ P
Sbjct: 447 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 506
Query: 391 AAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGIC 433
I + E E++ + V P + N ++ G C
Sbjct: 507 NIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFC 549
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 151/362 (41%), Gaps = 5/362 (1%)
Query: 109 WNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMD 167
+N ++ + K F+ + M+ G+ L T+ +C + + A+ M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 168 NHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNA 226
G E D+V ++SLL+ C + S A+ ++ V+ PD +F L+ G A
Sbjct: 146 KLGYEPDIVTLSSLLNGYC-HSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKA 204
Query: 227 AKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFT 286
++A +MV R + +++ Y + L + I+ L LK M+ + +
Sbjct: 205 SEAVALVDQMVQR--GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262
Query: 287 YALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLH 346
+D K A+ L+ M GI P++ Y+++I CN G +A RLL +M+
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
Query: 347 GAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAA 406
P+ +T++ + V+ K+ E E + EM+K P ++ I D + A
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
Query: 407 HEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDA 466
++ M+ P + + L+ G C R E +M R ++ T L
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442
Query: 467 FY 468
F+
Sbjct: 443 FF 444
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 112/259 (43%), Gaps = 4/259 (1%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
T+ S +C+ R +EA F++M + +VV ++L+ C + + ME F E
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC-KAKRVEEGMELFRE 423
Query: 202 VKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
+ + + + ++ L+ G+ + + A+ F +MV VG N++ Y+ L L +
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV-SVGV-HPNILTYNILLDGLCKN 481
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
++ + + + ++ P + + ++ K L+ + G+ PN+I Y
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
N MI C G + A LL +M G P+S TYN + + +R+ + EM
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
Query: 381 NEWPPTSSNCAAAIAMLFD 399
+ +S ML D
Sbjct: 602 CGFAGDASTIGLVTNMLHD 620
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 123/290 (42%), Gaps = 6/290 (2%)
Query: 198 FFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTL 257
F + VK + P F LL K N + + GE + +G S ++ Y F+
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKM-NKFELVISLGEQMQTLGIS-HDLYTYSIFINCF 128
Query: 258 LRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNL 317
R SQ+ L L M P + + L+ + + A+ L D MV G P+
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 318 IMYNAMI-GLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFA 376
+ +I GL +N + A L+D+MV G PD +TY + L + + S
Sbjct: 189 FTFTTLIHGLFLHN-KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLK 247
Query: 377 EMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLS 436
+M K + I L + A +++ M ++P + ++L+ +C+
Sbjct: 248 KMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 307
Query: 437 RFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR--SRKDRFDSLFRR 484
R+S+ R DM++R+I T + L DAF EG+ + +D + +R
Sbjct: 308 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 151/365 (41%), Gaps = 5/365 (1%)
Query: 109 WNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMD 167
+N ++ + K F+ + M+ G+ L T+ +C + + A+ M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 168 NHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNA 226
G E D+V ++SLL+ C + S A+ ++ V+ PD +F L+ G A
Sbjct: 146 KLGYEPDIVTLSSLLNGYC-HSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKA 204
Query: 227 AKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFT 286
++A +MV R + +++ Y + L + I+ L L M+ + F
Sbjct: 205 SEAVALVDQMVQR--GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFN 262
Query: 287 YALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLH 346
+D K A+ L+ M GI PN++ YN++I CN G +A RLL M+
Sbjct: 263 TIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK 322
Query: 347 GAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAA 406
P+ +T+N + + K+ E E EM++ P + I + + A
Sbjct: 323 KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA 382
Query: 407 HEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDA 466
+++ +MV P ++ N L+ G C R + +M R ++ T +
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442
Query: 467 FYTEG 471
F+ G
Sbjct: 443 FFQAG 447
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 124/298 (41%), Gaps = 4/298 (1%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
TF + + + +EA+ D M G + D+V ++++ +C + A+ +
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC-KRGDIDLALNLLNK 248
Query: 202 VKG-KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
++ +I + F +++ K + A F EM + + NV+ Y++ + L
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK--GIRPNVVTYNSLINCLCNY 306
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
+ + R L M + P + F +D F KE A L + M+ I P+ I Y
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
N +I C + +D A ++ MV P+ TYN + + K+V + F EM +
Sbjct: 367 NLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426
Query: 381 NEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRF 438
+ I F D ++A ++ MV N V + + LL G+CS +
Sbjct: 427 RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKL 484
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 145/359 (40%), Gaps = 7/359 (1%)
Query: 110 NLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNH 169
N + D++ ++ D D ++S ++ +SA +F I + M
Sbjct: 56 NRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAK---MNKFELVISLGEQMQTL 112
Query: 170 GIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-KGKIAPDGDSFAILLEGWEKEGNAAK 228
GI D+ S+ + C +Q S A+ ++ K PD + + LL G+ +
Sbjct: 113 GISHDLYTY-SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 229 AKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYA 288
A +MV +G+ K + + + L ++ E + + M C P L +
Sbjct: 172 AVALVDQMV-EMGY-KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 289 LDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGA 348
++ K D A+ L + M A I N++++N +I C V+ A L EM G
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Query: 349 FPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHE 408
P+ +TYN + CL + + + M++ + P A I F A +
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEK 349
Query: 409 IWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAF 467
+ M++ + P + N L+ G C +R E ++ + M+ + + T N L + F
Sbjct: 350 LHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 126/309 (40%), Gaps = 9/309 (2%)
Query: 143 FVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV 202
F + S C A+ F M+ GI +VV NSL++ +C + + +
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 203 KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQ 262
+ KI P+ +F L++ + KEG +A+ EM+ R + + Y+ + ++
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR--SIDPDTITYNLLINGFCMHNR 378
Query: 263 IEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNA 322
++E + K M DC P ++ + ++ F K + L+ M G++ N + Y
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 323 MIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE 382
+I G+ D+A + +MV + D +TY+++ L K+ F + K+E
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Query: 383 WPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEV- 441
N M+ E W +KP + N ++ G+CS E
Sbjct: 499 MEL---NIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEAD 555
Query: 442 ---RRHAED 447
R+ ED
Sbjct: 556 DLFRKMKED 564
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 117/276 (42%), Gaps = 4/276 (1%)
Query: 198 FFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTL 257
F + VK + P F LL K N + + GE + +G S ++ Y F+
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKM-NKFELVISLGEQMQTLGIS-HDLYTYSIFINCF 128
Query: 258 LRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNL 317
R SQ+ L L M P + + L+ + + A+ L D MV G P+
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 318 IMYNAMI-GLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFA 376
+ +I GL +N + A L+D+MV G PD +TY + L + + +
Sbjct: 189 FTFTTLIHGLFLHN-KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLN 247
Query: 377 EMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLS 436
+M I L E A ++++ M ++P + N+L+ +C+
Sbjct: 248 KMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYG 307
Query: 437 RFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR 472
R+S+ R +ML+++I T N L DAF+ EG+
Sbjct: 308 RWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 141/341 (41%), Gaps = 12/341 (3%)
Query: 141 RTFVSAFQSY--CVAGRFNEAIMSFDVMDNHGIE------KDVVAVNSLLSSICCEENQT 192
R+F SA Y + R ++ I D +D G +V N LLS++ + N+
Sbjct: 41 RSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVA-KMNKF 99
Query: 193 STAMEFFEEVKG-KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYD 251
+ E+++ I+ D +++I + + + + A +M +++G+ + +++
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKM-MKLGY-EPDIVTLS 157
Query: 252 AFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAG 311
+ L + +I + + + M + P FT + N A+ A+ L D MV
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217
Query: 312 GIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRET 371
G P+L+ Y ++ C G++D A LL++M + + +N I L + + V
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA 277
Query: 372 ESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIG 431
F EM P + I L + A + S M+E + P + NAL+
Sbjct: 278 VDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDA 337
Query: 432 ICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR 472
+ E + E+M+ R I T N L + F R
Sbjct: 338 FFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR 378
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 112/263 (42%), Gaps = 15/263 (5%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
T+ +C+ R +EA F M + ++ N+L++ C + + +E F E
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC-KCKRVEDGVELFRE 423
Query: 202 VKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVI-RVGWSKENVMAYDAFLLTLLR 259
+ + + + ++ +++G+ + G+ A+ F +MV RV ++M Y L L
Sbjct: 424 MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRV---PTDIMTYSILLHGLCS 480
Query: 260 ASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIM 319
+++ L K ++ + + + ++ K A WD + I P+++
Sbjct: 481 YGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVT 537
Query: 320 YNAMIGLQCNN---GEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFA 376
YN MI C+ E D+ FR + E G P+S TYN + + +R+ +
Sbjct: 538 YNTMISGLCSKRLLQEADDLFRKMKE---DGTLPNSGTYNTLIRANLRDCDRAASAELIK 594
Query: 377 EMVKNEWPPTSSNCAAAIAMLFD 399
EM + + +S + ML D
Sbjct: 595 EMRSSGFVGDASTISLVTNMLHD 617
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 152/360 (42%), Gaps = 37/360 (10%)
Query: 61 IETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGRLQKHSPH--AWNLMVDLLGK 118
I+ +L+S GI S D V +VL + V FF WA R + ++++++ LG+
Sbjct: 104 IQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGR 163
Query: 119 NELFDPMWDAIRSMKQEGV-LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVA 177
+LF M D ++ M EGV L A S+ AI F+ ++ G++ +
Sbjct: 164 RKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTES 223
Query: 178 VNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMV 237
N+LL +C E + S A F KG I D S+ I++ GW K G + + EMV
Sbjct: 224 FNALLRCLC-ERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMV 282
Query: 238 ------------------IRVGWSKENVM---------------AYDAFLLTLLRASQIE 264
R G ++V Y+A + + A +
Sbjct: 283 ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFD 342
Query: 265 EVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMI 324
E +R+ + M D +C P L+ ++ + +K + A+ +++ M++ G++P + + +
Sbjct: 343 ESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFL 402
Query: 325 GLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWP 384
C+ G A + + G Y ++ K L R K + + EM ++ +P
Sbjct: 403 KPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYP 462
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/379 (20%), Positives = 143/379 (37%), Gaps = 65/379 (17%)
Query: 141 RTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAME--- 197
R S ++ A +N + + NHG+ + + L S + N+TS + E
Sbjct: 14 RVHSSDLENLISASLYNRTLCTASESLNHGVVDESYVLAELSSLLPISSNKTSVSKEDSS 73
Query: 198 --------------------FFEEVKGKIAPD--------GDSFAILLEGWEKEGNAAKA 229
F +++KGK A G S I+ + + + +A
Sbjct: 74 SKNQVAIDSFLSAEDKLRGVFLQKLKGKSAIQKSLSSLGIGLSIDIVADVLNRGNLSGEA 133
Query: 230 KTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYAL 289
TF + +R ++V +Y L L R ++ LK M P L+ T A+
Sbjct: 134 MVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAM 193
Query: 290 DVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNN------------------- 330
D FV+ + AI L++ + G+ + +NA++ C
Sbjct: 194 DSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPF 253
Query: 331 ---------------GEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFF 375
GEV+ ++L EMV G PD L+Y+ + + L R ++ ++ F
Sbjct: 254 DSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIF 313
Query: 376 AEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSL 435
+ P ++ A I D + + + M++ +P E+ + L+ G+
Sbjct: 314 DNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKG 373
Query: 436 SRFSEVRRHAEDMLDRRII 454
+ S+ E+ML R ++
Sbjct: 374 RKVSDALEIFEEMLSRGVL 392
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 132/294 (44%), Gaps = 5/294 (1%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
T+ + + YC AG+ +A+ M+ G E D + +++ + C ++ + + ++E
Sbjct: 259 TYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQA-CYADSDFGSCVALYQE 317
Query: 202 VKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
+ K I +F++++ G KEG + T F E +IR G SK NV Y + ++
Sbjct: 318 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVF-ENMIRKG-SKPNVAIYTVLIDGYAKS 375
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
+E+ +R L M D P + ++ ++ K A+ + G+ N + Y
Sbjct: 376 GSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFY 435
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
+++I G VD A RL +EM G DS YN + +++KV E + F M +
Sbjct: 436 SSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEE 495
Query: 381 NEW-PPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGIC 433
E T ++ +F E A ++W M++ + P AL G+C
Sbjct: 496 EEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLC 549
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 129/268 (48%), Gaps = 7/268 (2%)
Query: 106 PHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFD 164
PHA++L++ L K + + +M ++G + + Y +G +AI
Sbjct: 327 PHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLH 386
Query: 165 VMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK-GKIAPDGDSFAILLEGWEKE 223
M + G + DVV + +++ +C + + A+++F + +A + ++ L++G K
Sbjct: 387 RMIDEGFKPDVVTYSVVVNGLC-KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKA 445
Query: 224 GNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHD-CFPGL 282
G +A+ F EM + G ++++ Y+A + + +++E + K M++ + C +
Sbjct: 446 GRVDEAERLFEEMSEK-GCTRDSY-CYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTV 503
Query: 283 KFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDE 342
+T L KE+ A+ LWD M+ GI P + A+ C +G+V A ++LDE
Sbjct: 504 YTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDE 563
Query: 343 MVLHGAFPDSLTYNMIFKCLVRNKKVRE 370
+ G D+ +MI L + +++E
Sbjct: 564 LAPMGVILDAACEDMI-NTLCKAGRIKE 590
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 147/354 (41%), Gaps = 21/354 (5%)
Query: 41 NVSPVARTLCNLLTRTSPPEIETALTSSGIHPSDD---CVREVLKLSYNY---------- 87
+VS + ++ NLL +I L S S+ C + ++KLS N+
Sbjct: 69 DVSDLVKSNRNLLPSPWVSQILNLLDGSASMESNLDGFCRKFLIKLSPNFVSFVLKSDEI 128
Query: 88 ---PHSAVKFFRWAGRLQK--HSPHAWNLMVDLLGKNELFDPMWDAIRSMKQ-EGVLTLR 141
P A FF W+ + +K H+ + +VD+L + D + +K+ E +T+
Sbjct: 129 REKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVS 188
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
+ +S+ G E + + M +GIE + N L++ + S F
Sbjct: 189 AANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVM 248
Query: 202 VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRAS 261
G+I PD ++ +++G+ K G KA +M R + + + Y + S
Sbjct: 249 ESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETR--GHEADKITYMTMIQACYADS 306
Query: 262 QIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYN 321
+ + M + F+ + KE +++ M+ G PN+ +Y
Sbjct: 307 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYT 366
Query: 322 AMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFF 375
+I +G V++A RLL M+ G PD +TY+++ L +N +V E +F
Sbjct: 367 VLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF 420
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 88/224 (39%), Gaps = 8/224 (3%)
Query: 246 NVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLW 305
V A +A + + + +EE+L + MK++ P L + + ++ V A ++
Sbjct: 186 TVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF 245
Query: 306 DAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRN 365
+ M +G I P+++ YN MI C G+ A L +M G D +TY + + +
Sbjct: 246 EVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYAD 305
Query: 366 KKVRETESFFAEMVKN--EWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHE 423
+ + EM + + PP + + I L + ++ M+ KP
Sbjct: 306 SDFGSCVALYQEMDEKGIQVPPHAF--SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVA 363
Query: 424 SANALLIGICSLSRFSEVRRHAEDMLDR----RIIIYESTMNKL 463
L+ G + R M+D ++ Y +N L
Sbjct: 364 IYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGL 407
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 155/341 (45%), Gaps = 30/341 (8%)
Query: 94 FFRWAGRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCV 152
F + G K + +N ++D L K++ D D + M+++G+ + T+ S C
Sbjct: 174 FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233
Query: 153 AGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGD 211
+GR+++A M I DV N+L+ + C +E + S A EF+EE ++ + PD
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDA-CVKEGRVSEAEEFYEEMIRRSLDPDIV 292
Query: 212 SFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLK 271
++++L+ G +A+ FG MV + + +V+ Y + ++ ++E ++
Sbjct: 293 TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFP--DVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 272 VMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNG 331
M +T + + + A ++ MV G+ PN+I YN ++ C+NG
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNG 410
Query: 332 EVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCA 391
+++ A +L +M +G D +TYN+I + + + +V + + + NC
Sbjct: 411 KIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL----------NCQ 460
Query: 392 AAIAMLFDCDDPEAAHEIWSY---MVENHVKPLHESANALL 429
+ +IW+Y M+ + K L A+AL
Sbjct: 461 GLMP------------DIWTYTTMMLGLYKKGLRREADALF 489
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 116/279 (41%), Gaps = 39/279 (13%)
Query: 139 TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEF 198
++ TF S +C R +A+ FD M G + +VV N+++ + C+ Q A++
Sbjct: 150 SIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGL-CKSKQVDNALDL 208
Query: 199 FEEV------------------------------------KGKIAPDGDSFAILLEGWEK 222
+ K +I PD +F L++ K
Sbjct: 209 LNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Query: 223 EGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGL 282
EG ++A+ + EM+ R +++ Y + L S+++E M CFP +
Sbjct: 269 EGRVSEAEEFYEEMIRRS--LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326
Query: 283 KFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDE 342
++ ++ + K H + L+ M G++ N + Y +I C G+++ A +
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Query: 343 MVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKN 381
MV G P+ +TYN++ L N K+ + A+M KN
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 129/325 (39%), Gaps = 8/325 (2%)
Query: 147 FQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-K 205
+C + + A+ M G E +V SLL+ C ++ A+ F+++ G
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGF-CRGDRVYDALYMFDQMVGMG 181
Query: 206 IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEE 265
P+ + +++G K A M +V+ Y++ + L + + +
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRM--EKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 266 VLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIG 325
R + M + +P + F +D VKE + A ++ M+ + P+++ Y+ +I
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 326 LQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPP 385
C +D A + MV G FPD +TY+++ ++KKV F EM +
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
Query: 386 TSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHA 445
+ I A EI+ MV V P + N LL G+C + +
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVIL 419
Query: 446 EDM----LDRRIIIYESTMNKLKDA 466
DM +D I+ Y + + A
Sbjct: 420 ADMQKNGMDADIVTYNIIIRGMCKA 444
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 88/204 (43%), Gaps = 4/204 (1%)
Query: 246 NVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLW 305
N+ + L R SQ+ L FL M P + F L+ F + + A+ ++
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 306 DAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRN 365
D MV G PN+++YN +I C + +VDNA LL+ M G PD +TYN + L +
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS 234
Query: 366 KKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESA 425
+ + + M K E P A I A E + M+ + P +
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294
Query: 426 NALLIGICSLSRFSEVRRHAEDML 449
+ L+ G+C SR E AE+M
Sbjct: 295 SLLIYGLCMYSRLDE----AEEMF 314
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 137/331 (41%), Gaps = 41/331 (12%)
Query: 155 RFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSF 213
+++ I ++ M GI ++ N LL+ C +Q S A+ F + +K P +F
Sbjct: 96 KYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC-RCSQLSLALSFLGKMIKLGHEPSIVTF 154
Query: 214 AILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVM 273
LL G+ + A F +MV +G+ K NV+ Y+ + L ++ Q++
Sbjct: 155 GSLLNGFCRGDRVYDALYMFDQMV-GMGY-KPNVVIYNTIIDGLCKSKQVD--------- 203
Query: 274 KDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEV 333
+A+ L + M GI P+++ YN++I C++G
Sbjct: 204 --------------------------NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 334 DNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAA 393
+A R++ M +PD T+N + V+ +V E E F+ EM++ P +
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 394 IAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRI 453
I L + A E++ +MV P + + L+ G C + + +M R +
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 454 IIYESTMNKLKDAFYTEGRSRKDRFDSLFRR 484
+ T L + G + + + +FRR
Sbjct: 358 VRNTVTYTILIQGYCRAG--KLNVAEEIFRR 386
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 149/345 (43%), Gaps = 13/345 (3%)
Query: 126 WDAIRSM-KQEGVLTLR----TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNS 180
+D + S+ K+ VL +R TF +C + + A+ M G E D V + S
Sbjct: 101 YDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGS 160
Query: 181 LLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIR 239
L++ C N+ S A+ ++ V+ PD ++ +++ K A F E + R
Sbjct: 161 LVNGFC-RRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE-IER 218
Query: 240 VGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAA 299
G + NV+ Y A + L +S+ + R L M P + ++ LD FVK
Sbjct: 219 KGI-RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVL 277
Query: 300 HAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIF 359
A L++ MV I P+++ Y+++I C + +D A ++ D MV G D ++YN +
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Query: 360 KCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVK 419
+ K+V + F EM + + I F D + A E +S M +
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Query: 420 PLHESANALLIGICSLSRFSEVRRHAEDM----LDRRIIIYESTM 460
P + N LL G+C + EDM +D I+ Y + +
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 145/354 (40%), Gaps = 42/354 (11%)
Query: 119 NELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAV 178
N+ D D ++S ++ +SA +++ I M+ GI D+
Sbjct: 67 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKL---KKYDVVISLGKKMEVLGIRNDLYTF 123
Query: 179 NSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMV 237
N +++ CC Q S A+ + +K PD + L+ G+ + + A + +MV
Sbjct: 124 NIVINCFCCC-FQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 238 IRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKEND 297
+G+ K +++AY+A + +L + ++ + F K ++
Sbjct: 183 -EIGY-KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK--------------------- 219
Query: 298 AAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNM 357
GI PN++ Y A++ CN+ +A RLL +M+ P+ +TY+
Sbjct: 220 --------------GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 358 IFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENH 417
+ V+N KV E + F EMV+ P ++ I L D + A++++ MV
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 418 VKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEG 471
S N L+ G C R + + +M R ++ T N L F+ G
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 127/280 (45%), Gaps = 5/280 (1%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVM 166
A+N ++D L K + + +D + ++++G+ + T+ + C + R+++A M
Sbjct: 192 AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM 251
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGN 225
I +V+ ++LL + + + A E FEE V+ I PD +++ L+ G
Sbjct: 252 IKKKITPNVITYSALLDAFV-KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 226 AAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFF 285
+A F MV + + +V++Y+ + +A ++E+ ++ + M +
Sbjct: 311 IDEANQMFDLMVSKGCLA--DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 286 TYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVL 345
+ F + D A + M GI P++ YN ++G C+NGE++ A + ++M
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428
Query: 346 HGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPP 385
D +TY + + + + KV E S F + P
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 96/230 (41%), Gaps = 2/230 (0%)
Query: 256 TLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMP 315
T LR ++ + + M FP + F L VK I L M GI
Sbjct: 59 TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN 118
Query: 316 NLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFF 375
+L +N +I C +V A +L +M+ G PD +T + R +V + S
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 376 AEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSL 435
+MV+ + P A I L A + + + ++P + AL+ G+C+
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 436 SRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR--SRKDRFDSLFR 483
SR+S+ R DM+ ++I T + L DAF G+ K+ F+ + R
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 148/371 (39%), Gaps = 48/371 (12%)
Query: 104 HSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEG----VLTLRTFVSAFQSYCVAGRFNEA 159
H+ + +N+M++ L + + M + G ++TL + ++ F C R +EA
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGF---CHGNRISEA 154
Query: 160 IMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE--VKGKIAPDGDSFAILL 217
+ D M G + D V +L+ + + N+ S A+ E VKG PD ++ ++
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLF-QHNKASEAVALVERMVVKG-CQPDLVTYGAVI 212
Query: 218 EGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVL---------- 267
G K G A +M G + +V+ Y + +L + +++ L
Sbjct: 213 NGLCKRGEPDLALNLLNKM--EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 268 -------------------------RFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAI 302
R L M + P + F +D F KE A
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 303 PLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCL 362
L+D M+ I PN++ YN++I C + +D A ++ MV PD +TYN +
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 363 VRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLH 422
+ KKV + F +M + + I F D + A ++ MV + V P
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450
Query: 423 ESANALLIGIC 433
+ N LL G+C
Sbjct: 451 MTYNTLLDGLC 461
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 152/375 (40%), Gaps = 34/375 (9%)
Query: 43 SPVARTLCNLLTRTSPPEIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRW--AGR 100
S V +LC + T + + GI P ++ NY RW A R
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG-------RWSDASR 296
Query: 101 L------QKHSPHA--WNLMVDLLGKN-------ELFDPMWDAIRSMKQEGVLTLRTFVS 145
L +K +P+ +N ++D K +LFD M RS+ V T+ S
Sbjct: 297 LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ--RSIDPNIV----TYNS 350
Query: 146 AFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK 205
+C+ R +EA F +M + DVV N+L++ C + + ME F ++ +
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC-KAKKVVDGMELFRDMSRR 409
Query: 206 -IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIE 264
+ + ++ L+ G+ + + A+ F +MV N+M Y+ L L + ++E
Sbjct: 410 GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV--SDGVHPNIMTYNTLLDGLCKNGKLE 467
Query: 265 EVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMI 324
+ + + ++ P + + + K L+ ++ G+ P++I YN MI
Sbjct: 468 KAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMI 527
Query: 325 GLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWP 384
C G + A+ L +M G PDS TYN + + +R+ + EM +
Sbjct: 528 SGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFA 587
Query: 385 PTSSNCAAAIAMLFD 399
+S ML D
Sbjct: 588 GDASTYGLVTDMLHD 602
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 131/338 (38%), Gaps = 73/338 (21%)
Query: 143 FVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV 202
+ + S C ++A+ F MDN GI DV +SL+S +C + + + +
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 203 KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQ 262
+ KI P+ +F L++ + KEG +A+ F EM+ R N++ Y++ + +
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR--SIDPNIVTYNSLINGFCMHDR 360
Query: 263 IEEVLRFLKVMKDHDCFP--------------------GLKFF---------------TY 287
++E + +M DC P G++ F T
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 288 ALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNA----------- 336
+ F + +D +A ++ MV+ G+ PN++ YN ++ C NG+++ A
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 337 -------FRLLDE-----------------MVLHGAFPDSLTYNMIFKCLVRNKKVRETE 372
+ ++ E + L G PD + YN + + E
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 373 SFFAEMVKNEWPPTSSNCAAAI-AMLFDCDDPEAAHEI 409
+ F +M ++ P S I A L D D +A I
Sbjct: 541 TLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 578
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 144/334 (43%), Gaps = 43/334 (12%)
Query: 155 RFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFE--EVKGKIAPDGDS 212
+ +EA+ F M +V + LLS+I + + + F E E+ G ++ + +
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIA-KMKKFDLVISFGEKMEILG-VSHNLYT 102
Query: 213 FAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKV 272
+ I++ + + A G+M +++G+ +++ ++ L ++I E + +
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKM-MKLGYG-PSIVTLNSLLNGFCHGNRISEAVALVDQ 160
Query: 273 MKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGE 332
M + P FT + + N A+ A+ L + MV G P+L+ Y A+I C GE
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 333 VDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAA 392
D A LL++M D + Y+ + L + + V + + F EM
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM-------------- 266
Query: 393 AIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRR 452
D+ ++++Y ++L+ +C+ R+S+ R DML+R+
Sbjct: 267 --------DNKGIRPDVFTY-------------SSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 453 IIIYESTMNKLKDAFYTEGR--SRKDRFDSLFRR 484
I T N L DAF EG+ + FD + +R
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 3/246 (1%)
Query: 141 RTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFE 200
+ +V+ + N A + M G+ V ++N L+ ++C + ++ F
Sbjct: 122 KAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFL 181
Query: 201 EV-KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLR 259
E+ K PD ++ L+ G + G +AK F EMV + V+ Y + + L
Sbjct: 182 EMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK--DCAPTVVTYTSLINGLCG 239
Query: 260 ASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIM 319
+ ++E +R+L+ MK P + ++ +D K+ + A+ L++ M+A G PN++
Sbjct: 240 SKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVT 299
Query: 320 YNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMV 379
Y +I C ++ A LLD M L G PD+ Y + K RE +F EM+
Sbjct: 300 YTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMI 359
Query: 380 KNEWPP 385
P
Sbjct: 360 LGGITP 365
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 102/241 (42%), Gaps = 19/241 (7%)
Query: 230 KTTFGEMVIR--------------VGWSKENVMAYDAFLLTLLRA----SQIEEVLRFLK 271
+++FG MV+R V EN + + LL++ R + + LR
Sbjct: 51 QSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFH 110
Query: 272 VMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQC-NN 330
MKD DC P K + L + V+EN A + M G+ P + N +I C N+
Sbjct: 111 KMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRND 170
Query: 331 GEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNC 390
G VD ++ EM G PDS TY + L R ++ E + F EMV+ + PT
Sbjct: 171 GTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTY 230
Query: 391 AAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLD 450
+ I L + + A M ++P + ++L+ G+C R + E M+
Sbjct: 231 TSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMA 290
Query: 451 R 451
R
Sbjct: 291 R 291
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 101/260 (38%), Gaps = 45/260 (17%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
T+ + C GR +EA F M VV SL++ +C +N AM + EE
Sbjct: 194 TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN-VDEAMRYLEE 252
Query: 202 VKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
+K K I P+ +++ L++G K+G + +A F M+ R + N++ Y + L +
Sbjct: 253 MKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR--GCRPNMVTYTTLITGLCKE 310
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
+I+E + L M P + + F + A D M+ GGI PN + +
Sbjct: 311 QKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTW 370
Query: 321 N-----------------------------------------AMIGLQCNNGEVDNAFRL 339
N +++ C GE A +L
Sbjct: 371 NIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQL 430
Query: 340 LDEMVLHGAFPDSLTYNMIF 359
+DE+V G P T+ ++
Sbjct: 431 VDEIVTDGCIPSKGTWKLLI 450
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 131/354 (37%), Gaps = 45/354 (12%)
Query: 104 HSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEG-VLTLRTFVSAFQSYCVAGRFNEAIMS 162
H ++ MV L F D I MK E V++ +S + Y R +++
Sbjct: 49 HDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRV 108
Query: 163 FDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAILLEGW- 220
F M + + A ++L+ I EENQ + A +F++ ++ + P S +L++
Sbjct: 109 FHKMKDFDCDPSQKAYVTVLA-ILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALC 167
Query: 221 EKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFP 280
+G F EM R + Y + L R +I+E + M + DC
Sbjct: 168 RNDGTVDAGLKIFLEMPKR--GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC-- 223
Query: 281 GLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLL 340
P ++ Y ++I C + VD A R L
Sbjct: 224 ---------------------------------APTVVTYTSLINGLCGSKNVDEAMRYL 250
Query: 341 DEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDC 400
+EM G P+ TY+ + L ++ + + F M+ P I L
Sbjct: 251 EEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKE 310
Query: 401 DDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRII 454
+ A E+ M +KP ++ G C++S+F R A + LD I+
Sbjct: 311 QKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKF----REAANFLDEMIL 360
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 142/421 (33%), Gaps = 107/421 (25%)
Query: 139 TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSI------------- 185
T+ T+ S YC G+ N+A+ + M GI + +LLS +
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 186 ---------------------CCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKE 223
CEE S A EF +E+ K I PD S+ L+ G
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT 590
Query: 224 GNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLR--------------- 268
G A++AK + G + N + Y L R ++EE L
Sbjct: 591 GQASEAKVFVDGL--HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Query: 269 --------------------FLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAM 308
LK M D P +T +D K D A +WD M
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708
Query: 309 VAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEM------------------------- 343
+ G +PN + Y A+I C G V+ A L +M
Sbjct: 709 INEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVD 768
Query: 344 ----------VLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAA 393
+L G ++ TYNM+ + R ++ E M+ + P
Sbjct: 769 MQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTM 828
Query: 394 IAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRI 453
I L +D + A E+W+ M E ++P + N L+ G C + +ML + +
Sbjct: 829 INELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888
Query: 454 I 454
I
Sbjct: 889 I 889
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 144/373 (38%), Gaps = 19/373 (5%)
Query: 109 WNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLR----TFVSAFQSYCVAGRFNEAIMSFD 164
+N+++D L K + +W+A+ K L+ T+ + C F + D
Sbjct: 265 YNVLIDGLCKKQ---KVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321
Query: 165 VMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAILLEGWEKE 223
M AV+SL+ + + + A+ + V ++P+ + L++ K
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLR-KRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKG 380
Query: 224 GNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLK 283
+A+ F M ++G + N + Y + R +++ L FL M D GLK
Sbjct: 381 RKFHEAELLFDRMG-KIGL-RPNDVTYSILIDMFCRRGKLDTALSFLGEMVD----TGLK 434
Query: 284 FFTYALDVFV----KENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRL 339
Y + + K D + A M+ + P ++ Y +++G C+ G+++ A RL
Sbjct: 435 LSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494
Query: 340 LDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFD 399
EM G P T+ + L R +R+ F EM + P I +
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 400 CDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYEST 459
D A E M E + P S L+ G+C + SE + + + + E
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC 614
Query: 460 MNKLKDAFYTEGR 472
L F EG+
Sbjct: 615 YTGLLHGFCREGK 627
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 131/335 (39%), Gaps = 6/335 (1%)
Query: 143 FVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV 202
+ +S C + A M+ G + ++V N L+ +C ++ + A+ +++
Sbjct: 230 YTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLC-KKQKVWEAVGIKKDL 288
Query: 203 KGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMV-IRVGWSKENVMAYDAFLLTLLRA 260
GK + PD ++ L+ G K EM+ +R S+ A + + L +
Sbjct: 289 AGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEA---AVSSLVEGLRKR 345
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
+IEE L +K + D P L + +D K A L+D M G+ PN + Y
Sbjct: 346 GKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTY 405
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
+ +I + C G++D A L EMV G YN + + + E F AEM+
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMIN 465
Query: 381 NEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSE 440
+ PT + + A ++ M + P + LL G+ +
Sbjct: 466 KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD 525
Query: 441 VRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRK 475
+ +M + + T N + + + EG K
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 560
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 135/366 (36%), Gaps = 46/366 (12%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLR----TFVSAFQSYCVAGRFNEAIMSF 163
+N ++D L K F +A + G + LR T+ +C G+ + A+
Sbjct: 369 VYNALIDSLCKGRKFH---EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 164 DVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEK 222
M + G++ V NSL++ C + S A F E + K+ P ++ L+ G+
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHC-KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCS 484
Query: 223 EGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGL 282
+G KA + EM + ++ + L L RA I + ++ M + + P
Sbjct: 485 KGKINKALRLYHEMTGK--GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542
Query: 283 KFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMI-----------------G 325
+ ++ + +E D + A M GI+P+ Y +I G
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602
Query: 326 LQ------------------CNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKK 367
L C G+++ A + EMV G D + Y ++ +++K
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD 662
Query: 368 VRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANA 427
+ EM P + I D + A IW M+ P + A
Sbjct: 663 RKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTA 722
Query: 428 LLIGIC 433
++ G+C
Sbjct: 723 VINGLC 728
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 95/236 (40%), Gaps = 12/236 (5%)
Query: 121 LFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNS 180
L M D R +K + V+ + S + G F EA +D+M N G + V +
Sbjct: 669 LLKEMHD--RGLKPDDVI----YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTA 722
Query: 181 LLSSICCEE--NQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVI 238
+++ +C N+ + V P+ ++ L+ K G K I
Sbjct: 723 VINGLCKAGFVNEAEVLCSKMQPVSS--VPNQVTYGCFLDILTK-GEVDMQKAVELHNAI 779
Query: 239 RVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDA 298
G N Y+ + R +IEE + M P +T ++ + ND
Sbjct: 780 LKGLLA-NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDV 838
Query: 299 AHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLT 354
AI LW++M GI P+ + YN +I C GE+ A L +EM+ G P++ T
Sbjct: 839 KKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 165/402 (41%), Gaps = 20/402 (4%)
Query: 78 REVLKLSYNYPHS-----AVKFFRWAGRLQKHSP----HAWNLMVDLLGKNELFDPMWDA 128
RE+L+ N HS A+ F G + K P +N ++ + K + FD +
Sbjct: 54 REILR---NGLHSMKLDDAIGLF---GGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISL 107
Query: 129 IRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICC 187
M++ G+ L T+ +C + + A+ M G E +V ++SLL+ C
Sbjct: 108 GEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGY-C 166
Query: 188 EENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKEN 246
+ S A+ ++ V+ PD +F L+ G A++A MV R + N
Sbjct: 167 HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR--GCQPN 224
Query: 247 VMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWD 306
++ Y + L + I+ L M+ + ++ +D K A+ L+
Sbjct: 225 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT 284
Query: 307 AMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNK 366
M G+ PN+I Y+++I CN +A RLL +M+ P+ +T+N + V+
Sbjct: 285 EMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEG 344
Query: 367 KVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESAN 426
K+ E E + EM+K P ++ I D + A ++ M+ P + N
Sbjct: 345 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 404
Query: 427 ALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFY 468
L+ G C R E +M R ++ T L F+
Sbjct: 405 TLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 145/367 (39%), Gaps = 40/367 (10%)
Query: 104 HSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMS 162
H+ + +N++++ + + M + G ++ T S YC R ++A+
Sbjct: 118 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 163 FDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWE 221
D M G D + +L+ + N+ S A+ + V+ P+ ++ +++ G
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLH-NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 222 KEGN------------AAK-----------------------AKTTFGEMVIRVGWSKEN 246
K G+ AAK A F EM + + N
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK--GVRPN 294
Query: 247 VMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWD 306
V+ Y + + L + + R L M + P + F +D FVKE A L+D
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 307 AMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNK 366
M+ I P++ Y+++I C + +D A + + M+ FP+ +TYN + + K
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 367 KVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESAN 426
++ E F EM + + I F D + A ++ MV + V P + N
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYN 474
Query: 427 ALLIGIC 433
LL G+C
Sbjct: 475 TLLDGLC 481
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 132/307 (42%), Gaps = 38/307 (12%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGV-LTLRTFVSAFQSYCVAGRFNEAIMSFDVM 166
+ ++V+ L K D ++ + M+ + + + + S C ++A+ F M
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNA 226
+N G+ +V+ +SL+S +C E + + + ++ KI P+ +F L++ + KEG
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Query: 227 AKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFP------ 280
+A+ + EM+ R ++ Y + + +++E ++M DCFP
Sbjct: 347 VEAEKLYDEMIKR--SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 404
Query: 281 --------------GLKFF---------------TYALDVFVKENDAAHAIPLWDAMVAG 311
G++ F T + F + D +A ++ MV+
Sbjct: 405 TLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 464
Query: 312 GIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRET 371
G+ PN++ YN ++ C NG+++ A + + + P TYN++ + + + KV +
Sbjct: 465 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Query: 372 ESFFAEM 378
F +
Sbjct: 525 WDLFCSL 531
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 141/330 (42%), Gaps = 34/330 (10%)
Query: 43 SPVARTLCNLLTRTSPPEIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRW--AGR 100
S V +LC + T + + G+ P+ ++ NY RW A R
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYE-------RWSDASR 316
Query: 101 L------QKHSPHA--WNLMVD-------LLGKNELFDPMWDAIRSMKQEGVLTLRTFVS 145
L +K +P+ +N ++D L+ +L+D M RS+ + + T+ S
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK--RSIDPD----IFTYSS 370
Query: 146 AFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK 205
+C+ R +EA F++M + +VV N+L++ C + + +E F E+ +
Sbjct: 371 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC-KAKRIDEGVELFREMSQR 429
Query: 206 -IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIE 264
+ + ++ L+ G+ + + A+ F +MV N+M Y+ L L + ++E
Sbjct: 430 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV--SDGVHPNIMTYNTLLDGLCKNGKLE 487
Query: 265 EVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMI 324
+ + + ++ P + + ++ K L+ ++ G+ P++I+YN MI
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Query: 325 GLQCNNGEVDNAFRLLDEMVLHGAFPDSLT 354
C G + A L +M G PDS T
Sbjct: 548 SGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/276 (19%), Positives = 114/276 (41%), Gaps = 37/276 (13%)
Query: 246 NVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLW 305
++ ++ L + + + + V+ + M+ L + ++ F + + + A+ L
Sbjct: 84 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 143
Query: 306 DAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRN 365
M+ G P+++ ++++ C+ + +A L+D+MV G PD++T+ + L +
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 366 KKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHE---------------IW 410
K E + MV+ P + L D + A I+
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263
Query: 411 SYMVENHVKPLHE--------------------SANALLIGICSLSRFSEVRRHAEDMLD 450
S ++++ K HE + ++L+ +C+ R+S+ R DM++
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 451 RRIIIYESTMNKLKDAFYTEGR--SRKDRFDSLFRR 484
R+I T N L DAF EG+ + +D + +R
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 85/218 (38%), Gaps = 4/218 (1%)
Query: 250 YDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMV 309
Y L L + ++++ + M P + F L K I L + M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 310 AGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVR 369
GI NL YN +I C ++ A LL +M+ G P +T + + K++
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 370 ETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALL 429
+ + +MV+ + P + I LF + A + MV+ +P + ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 430 IGICSLS----RFSEVRRHAEDMLDRRIIIYESTMNKL 463
G+C F+ + + ++ ++IY + ++ L
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 143/339 (42%), Gaps = 12/339 (3%)
Query: 89 HSAVKFFRWAGRLQ--KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGV-LTLRTFVS 145
+++ F++ R K + H + +M+ LLG+ L D + M +GV ++ ++ +
Sbjct: 122 QRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTA 181
Query: 146 AFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK 205
+Y GR+ ++ D M N I ++ N+++++ + F E++ +
Sbjct: 182 LINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHE 241
Query: 206 -IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIE 264
I PD ++ LL G +A+ F M G ++ Y + T + ++E
Sbjct: 242 GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTM--NDGGIVPDLTTYSHLVETFGKLRRLE 299
Query: 265 EVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMI 324
+V L M P + + L+ + K A+ ++ M A G PN Y+ ++
Sbjct: 300 KVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
Query: 325 GLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWP 384
L +G D+ +L EM PD+ TYN++ + +E + F +MV+
Sbjct: 360 NLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIE 419
Query: 385 PTSSNCAAAIAMLFDCDDP---EAAHEIWSYMVENHVKP 420
P + ++F C E A +I YM N + P
Sbjct: 420 P---DMETYEGIIFACGKGGLHEDARKILQYMTANDIVP 455
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/320 (18%), Positives = 128/320 (40%), Gaps = 8/320 (2%)
Query: 138 LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAME 197
L+L F F+ + G + ++ F M K + +++ S+ E +E
Sbjct: 103 LSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLE 162
Query: 198 FFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSK--ENVMAYDAFL 254
F+E+ + ++ S+ L+ + + G + +T+ E++ R+ K +++ Y+ +
Sbjct: 163 VFDEMPSQGVSRSVFSYTALINAYGRNG---RYETSL-ELLDRMKNEKISPSILTYNTVI 218
Query: 255 LTLLRAS-QIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGI 313
R E +L M+ P + + L A ++ M GGI
Sbjct: 219 NACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGI 278
Query: 314 MPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETES 373
+P+L Y+ ++ ++ LL EM G+ PD +YN++ + ++ ++E
Sbjct: 279 VPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMG 338
Query: 374 FFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGIC 433
F +M P ++ + + + + +++ M ++ P + N L+
Sbjct: 339 VFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFG 398
Query: 434 SLSRFSEVRRHAEDMLDRRI 453
F EV DM++ I
Sbjct: 399 EGGYFKEVVTLFHDMVEENI 418
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 131/300 (43%), Gaps = 4/300 (1%)
Query: 138 LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAME 197
L+ + + +C AGR +A M G E D+V N LL+ + N A
Sbjct: 218 LSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYY-DNNMLKRAEG 276
Query: 198 FFEE-VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLT 256
E V+ I D S+ LL+ + + K + + G+ +V++Y + T
Sbjct: 277 VMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC--DVVSYSTLIET 334
Query: 257 LLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPN 316
RAS + R + M+ + +T + F++E +++ A L D M G+ P+
Sbjct: 335 FCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPD 394
Query: 317 LIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFA 376
I Y ++ C +G VD A+ + ++M+ H PD+++YN + L R+ +V E F
Sbjct: 395 RIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFE 454
Query: 377 EMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLS 436
+M E P I L AA+++W M++ + ++ L+ CS+S
Sbjct: 455 DMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCSMS 514
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 85/420 (20%), Positives = 159/420 (37%), Gaps = 50/420 (11%)
Query: 106 PHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFD 164
P ++ + L K + FD + + M+ G + + F C + A+ +F
Sbjct: 79 PFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFF 138
Query: 165 VMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKE 223
M G E DVV+ L++ + + + A+E + ++ ++PD + A L+ G
Sbjct: 139 CMVQRGREPDVVSYTILINGLF-RAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGL--- 194
Query: 224 GNAAKAKTTFGEMV---IRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFP 280
+A K + EMV I+ K + + Y+A + +A +IE+ M C P
Sbjct: 195 CHARKVDLAY-EMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEP 253
Query: 281 GLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDN----- 335
L + L+ + N A + MV GI + YN ++ C D
Sbjct: 254 DLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFM 313
Query: 336 ------------------------------AFRLLDEMVLHGAFPDSLTYNMIFKCLVRN 365
A+RL +EM G + +TY + K +R
Sbjct: 314 VKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLRE 373
Query: 366 KKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESA 425
+ +M + P + L + + A+ +++ M+E+ + P S
Sbjct: 374 GNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISY 433
Query: 426 NALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRKDRFDSLFRRW 485
N+L+ G+C R +E + EDM + E ++L F G R + + ++ W
Sbjct: 434 NSLISGLCRSGRVTEAIKLFEDMKGK-----ECCPDELTFKFIIGGLIRGKKLSAAYKVW 488
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 91/201 (45%), Gaps = 2/201 (0%)
Query: 129 IRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCE 188
++ M+ G + ++ + +++C A +A F+ M G+ +VV SL+ + E
Sbjct: 314 VKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLRE 373
Query: 189 ENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVM 248
N + + + ++PD + +L+ K GN KA F +M+ + +
Sbjct: 374 GNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEH--EITPDAI 431
Query: 249 AYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAM 308
+Y++ + L R+ ++ E ++ + MK +C P F + + ++ + A +WD M
Sbjct: 432 SYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQM 491
Query: 309 VAGGIMPNLIMYNAMIGLQCN 329
+ G + + + +I C+
Sbjct: 492 MDKGFTLDRDVSDTLIKASCS 512
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 9/233 (3%)
Query: 248 MAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKF-FTYALDVFVKEN--DAAHAIPL 304
+AY + + L+++ I+ ++ M+ H + F + + V V+E+ + A AI
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMR-HSSYRVFSFDYNRFIGVLVRESRFELAEAI-Y 67
Query: 305 WDAMVAG-GIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLV 363
WD G ++P Y+ I C + D LL +M G PD +N+ L
Sbjct: 68 WDMKPMGFSLIP--FTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLC 125
Query: 364 RNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHE 423
R KV F MV+ P + I LF A EIW+ M+ + V P ++
Sbjct: 126 RENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNK 185
Query: 424 SANALLIGICSLSRFSEVRRH-AEDMLDRRIIIYESTMNKLKDAFYTEGRSRK 475
+ AL++G+C + AE++ R+ + N L F GR K
Sbjct: 186 ACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEK 238
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 156/371 (42%), Gaps = 11/371 (2%)
Query: 49 LCNLLTRTSPPEIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGRLQKHSPHA 108
+ N++ R PE +L S + + + V VL+ + + +++FF WA ++P +
Sbjct: 54 VVNIVRREIHPE--RSLNSLRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTS 111
Query: 109 --WNLMVDLLGKNELFDPMWDAIRSMKQEGV-LTLRTFVSAFQSYCVAGRFNEAIMSFD- 164
+ + L ++ ++ MW ++ MK + ++ T + Y G ++A+ F+
Sbjct: 112 MEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNG 171
Query: 165 VMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEG 224
V G ++ V NSLL ++C + ++ + PD ++AIL+ GW G
Sbjct: 172 VPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAG 231
Query: 225 NAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKF 284
+A+ EM R G++ D + LL A +E + M P ++
Sbjct: 232 KMKEAQEFLDEMS-RRGFNPP-ARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQT 289
Query: 285 FTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMV 344
F ++ K + I ++ G+ ++ Y +I G++D AFRLL+ V
Sbjct: 290 FNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCV 349
Query: 345 LHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPE 404
G P Y I K + RN + SFF++M PP I M C
Sbjct: 350 EDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITM---CGRGG 406
Query: 405 AAHEIWSYMVE 415
+ +Y+VE
Sbjct: 407 KFVDAANYLVE 417
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 7/198 (3%)
Query: 242 WSKEN------VMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKE 295
W++ N M Y+ +L + E + + LK MKD + + ++ + K
Sbjct: 100 WARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKN 159
Query: 296 NDAAHAIPLWDAMVAG-GIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLT 354
A+ L++ + G + +YN+++ C+ A+ L+ M+ G PD T
Sbjct: 160 GHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRT 219
Query: 355 YNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMV 414
Y ++ K++E + F EM + + P + I L + E+A E+ S M
Sbjct: 220 YAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMT 279
Query: 415 ENHVKPLHESANALLIGI 432
+ P ++ N L+ I
Sbjct: 280 KGGFVPDIQTFNILIEAI 297
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 134/311 (43%), Gaps = 5/311 (1%)
Query: 107 HAWNLMVDLLGKNELFDPMWDAIRSMKQEG-VLTLRTFVSAFQSYCVAGRFNEAIMSFDV 165
++++++ L K + ++ SMK++G VL R + +C G+ N+A +
Sbjct: 553 RSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEE 612
Query: 166 MDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEG 224
M G E VV S++ + + ++ A FEE K K I + ++ L++G+ K G
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLA-KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVG 671
Query: 225 NAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKF 284
+A E++ + G + N+ +++ L L++A +I E L + MK+ C P
Sbjct: 672 RIDEAYLILEELMQK-GLTP-NLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVT 729
Query: 285 FTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMV 344
+ ++ K A W M G+ P+ I Y MI G + A L D
Sbjct: 730 YGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFK 789
Query: 345 LHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPE 404
+G PDS YN + + L + + S F E + P + C + L D E
Sbjct: 790 ANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLE 849
Query: 405 AAHEIWSYMVE 415
A + + + E
Sbjct: 850 QAAIVGAVLRE 860
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 124/273 (45%), Gaps = 5/273 (1%)
Query: 149 SYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-KGKIA 207
S+ G+ + A F ++ +G++ D V S++ + C+ N+ A+E FE + K +
Sbjct: 247 SFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIG-VLCKANRLDEAVEMFEHLEKNRRV 305
Query: 208 PDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVL 267
P ++ ++ G+ G +A + R S +V+AY+ L L + +++E L
Sbjct: 306 PCTYAYNTMIMGYGSAGKFDEAYSLLERQ--RAKGSIPSVIAYNCILTCLRKMGKVDEAL 363
Query: 268 RFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQ 327
+ + MK D P L + +D+ + A L D+M G+ PN+ N M+
Sbjct: 364 KVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRL 422
Query: 328 CNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTS 387
C + ++D A + +EM PD +T+ + L + +V + + +M+ ++ S
Sbjct: 423 CKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNS 482
Query: 388 SNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKP 420
+ I F+ E H+I+ M+ + P
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 142/361 (39%), Gaps = 4/361 (1%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMD 167
A+N ++ L K D MK++ L T+ C AG+ + A D M
Sbjct: 345 AYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQ 404
Query: 168 NHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKI-APDGDSFAILLEGWEKEGNA 226
G+ +V VN ++ + C+ + A FEE+ K+ PD +F L++G K G
Sbjct: 405 KAGLFPNVRTVNIMVDRL-CKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRV 463
Query: 227 AKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFT 286
A + +M+ + N + Y + + + E+ + K M + +C P L+
Sbjct: 464 DDAYKVYEKMLD--SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLN 521
Query: 287 YALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLH 346
+D K + +++ + A +P+ Y+ +I G + + L M
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581
Query: 347 GAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAA 406
G D+ YN++ + KV + EM + PT + I L D + A
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641
Query: 407 HEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDA 466
+ ++ ++ ++L+ G + R E E+++ + + T N L DA
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Query: 467 F 467
Sbjct: 702 L 702
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 154/370 (41%), Gaps = 12/370 (3%)
Query: 123 DPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSL 181
D M + M++ G T+ F + + + GR + A+ D M + ++ D+V N
Sbjct: 185 DMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVC 244
Query: 182 LSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFG--EMVI 238
+ S + + A +FF E++ + PD ++ ++ K +A F E
Sbjct: 245 IDSFG-KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
Query: 239 RVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDA 298
RV + AY+ ++ A + +E L+ + P + + L K
Sbjct: 304 RVPCT----YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV 359
Query: 299 AHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMI 358
A+ +++ M PNL YN +I + C G++D AF L D M G FP+ T N++
Sbjct: 360 DEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIM 418
Query: 359 FKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHV 418
L +++K+ E + F EM P + I L + A++++ M+++
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDC 478
Query: 419 KPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRKDRF 478
+ +L+ + R + + +DM+++ +N D + G K R
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGR- 537
Query: 479 DSLFRRWKAR 488
++F KAR
Sbjct: 538 -AMFEEIKAR 546
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 134/331 (40%), Gaps = 5/331 (1%)
Query: 112 MVDLLGKNELFDPMWDAIRSMKQEGVLTLR-TFVSAFQSYCVAGRFNEAIMSFDVMDNHG 170
++D LGK D + M T + S +++ GR + + M N
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
Query: 171 IEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKA 229
D+ +N+ + + + + FEE+K + PD S++IL+ G K G A +
Sbjct: 513 CSPDLQLLNTYMDCMF-KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANET 571
Query: 230 KTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYAL 289
F M + + AY+ + + ++ + + L+ MK P + + +
Sbjct: 572 YELFYSM--KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Query: 290 DVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAF 349
D K + A L++ + I N+++Y+++I G +D A+ +L+E++ G
Sbjct: 630 DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT 689
Query: 350 PDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEI 409
P+ T+N + LV+ +++ E F M + + P I L A
Sbjct: 690 PNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVF 749
Query: 410 WSYMVENHVKPLHESANALLIGICSLSRFSE 440
W M + +KP S ++ G+ +E
Sbjct: 750 WQEMQKQGMKPSTISYTTMISGLAKAGNIAE 780
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/392 (19%), Positives = 156/392 (39%), Gaps = 28/392 (7%)
Query: 109 WNLMVDLLGKNELFDPMWDAIRSM-KQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMD 167
+ M+ +L K D + + K V + + Y AG+F+EA +
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 168 NHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAA 227
G V+A N +L+ + + + A++ FEE+K AP+ ++ IL++ + G
Sbjct: 336 AKGSIPSVIAYNCILTCLR-KMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAG--- 391
Query: 228 KAKTTFGEMVIRVGWSKE----NVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLK 283
K T F +R K NV + + L ++ +++E + M C P
Sbjct: 392 KLDTAFE---LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448
Query: 284 FFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEM 343
F +D K A +++ M+ N I+Y ++I N+G ++ ++ +M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 344 VLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDP 403
+ PD N C+ + + + + F E+ + P + + + I L
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568
Query: 404 EAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDM----LDRRIIIYEST 459
+E++ M E + N ++ G C + ++ + E+M + ++ Y S
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 460 MNKLKDAFYTEGRSRKDRFDS---LFRRWKAR 488
+ +G ++ DR D LF K++
Sbjct: 629 I---------DGLAKIDRLDEAYMLFEEAKSK 651
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 4/199 (2%)
Query: 254 LLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGI 313
+L ++A+++ E +++M+ P +T + F N + + L+ M G
Sbjct: 140 VLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGY 199
Query: 314 MPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETES 373
P + ++ +I G VD+A LLDEM D + YN+ + KV
Sbjct: 200 EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWK 259
Query: 374 FFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGIC 433
FF E+ N P + I +L + + A E++ ++ +N P + N +++G
Sbjct: 260 FFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYG 319
Query: 434 SLSRFSEVRRHAEDMLDRR 452
S +F E A +L+R+
Sbjct: 320 SAGKFDE----AYSLLERQ 334
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 61/139 (43%)
Query: 249 AYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAM 308
AY + + + +L + M++ P + FT + F KE A+ L D M
Sbjct: 170 AYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEM 229
Query: 309 VAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKV 368
+ + ++++YN I G+VD A++ E+ +G PD +TY + L + ++
Sbjct: 230 KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRL 289
Query: 369 RETESFFAEMVKNEWPPTS 387
E F + KN P +
Sbjct: 290 DEAVEMFEHLEKNRRVPCT 308
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 167/421 (39%), Gaps = 43/421 (10%)
Query: 70 IHPSDDCVREVLKLSYNYPHSAVKFFRWAGRL--QKHSPHAWNLMVDLLGKNELFDPMWD 127
+ PS C VL+ S + A+KFF WA R +H P + M+++L K +L
Sbjct: 172 LKPSQVCA--VLR-SQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRR 228
Query: 128 AIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSIC 186
+ MK+ G+ T F SY AG+ +A+ +M G+E +++ N+ +
Sbjct: 229 VLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFV 288
Query: 187 ----------------------------------CEENQTSTAMEFFEEVKGK-IAPDGD 211
C+ ++ A+E E++ K PD
Sbjct: 289 RANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKV 348
Query: 212 SFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLK 271
S+ ++ KE + + +M G + V Y+ + L + +E L FLK
Sbjct: 349 SYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQV-TYNTLIHMLTKHDHADEALWFLK 407
Query: 272 VMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGG-IMPNLIMYNAMIGLQCNN 330
++ ++ + KE + A L + M++ G P+++ Y A++ C
Sbjct: 408 DAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRL 467
Query: 331 GEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNC 390
GEVD A +LL M HG P++++Y + + R K E ++ W P S
Sbjct: 468 GEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITY 527
Query: 391 AAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLD 450
+ + L A ++ MV P N LL +C R E R+ E+ L+
Sbjct: 528 SVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLN 587
Query: 451 R 451
+
Sbjct: 588 K 588
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 6/219 (2%)
Query: 249 AYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAM 308
A+ +++ RA Q+ + L+ L +M+ P L +DVFV+ N A+ + M
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM 303
Query: 309 VAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKV 368
GI+PN++ YN MI C+ V+ A LL++M G PD ++Y I L + K++
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRI 363
Query: 369 RETESFFAEMVKNE-WPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANA 427
E +M K P I ML D + A E + +A
Sbjct: 364 VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSA 423
Query: 428 LLIGICSLSRFSEVRRHAEDMLDR-----RIIIYESTMN 461
++ +C R SE + +ML + ++ Y + +N
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVN 462
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 108/252 (42%), Gaps = 5/252 (1%)
Query: 169 HGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAA 227
HG+ D V N+L+ + + + A+ F ++ + K D ++ ++ KEG +
Sbjct: 377 HGLVPDQVTYNTLIHMLT-KHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMS 435
Query: 228 KAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTY 287
+AK EM+ + G +V+ Y A + R ++++ + L+VM H P +T
Sbjct: 436 EAKDLINEMLSK-GHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTA 494
Query: 288 ALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHG 347
L+ + + A + + PN I Y+ ++ G++ A ++ EMVL G
Sbjct: 495 LLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKG 554
Query: 348 AFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAH 407
FP + N++ + L R+ + E F E + N I D+ +AA
Sbjct: 555 FFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAAL 614
Query: 408 EIWS--YMVENH 417
+ Y++ H
Sbjct: 615 SVLDDMYLINKH 626
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 113/283 (39%), Gaps = 8/283 (2%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAF-QSYCVAGRFNEAIMSFDVM 166
+N ++ +L K++ D ++ +++G + SA + C GR +EA + M
Sbjct: 385 TYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM 444
Query: 167 DNHG-IEKDVVAVNSLLSSIC--CEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKE 223
+ G DVV ++++ C E ++ ++ K P+ S+ LL G +
Sbjct: 445 LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHK--PNTVSYTALLNGMCRT 502
Query: 224 GNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLK 283
G + +A+ + W N + Y + L R ++ E ++ M FPG
Sbjct: 503 GKSLEAREMMN--MSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPV 560
Query: 284 FFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEM 343
L ++ A + + G N++ + +I C N E+D A +LD+M
Sbjct: 561 EINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDM 620
Query: 344 VLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPT 386
L D TY + L + ++ E +M+ PT
Sbjct: 621 YLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPT 663
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 140/343 (40%), Gaps = 49/343 (14%)
Query: 129 IRSMKQEGVLTLRTFVSAF-QSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICC 187
++ M++ GVL + + YC G+ EA ++ M + GI D L++ +
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF- 603
Query: 188 EENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKEN 246
+ ++ A E F E++GK IAPD S+ +L+ G+ K GN KA + F EMV G + N
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV-EEGLTP-N 661
Query: 247 VMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWD 306
V+ Y+ L R+ +IE+ A L D
Sbjct: 662 VIIYNMLLGGFCRSGEIEK-----------------------------------AKELLD 686
Query: 307 AMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNK 366
M G+ PN + Y +I C +G++ AFRL DEM L G PDS Y + R
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746
Query: 367 KVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHV----KPLH 422
V + F K +++ A I +F E E+ + +++ KP
Sbjct: 747 DVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805
Query: 423 ESANALLIGICSLSRFSEVRRHAEDM----LDRRIIIYESTMN 461
+ N ++ +C + M L +I Y S +N
Sbjct: 806 VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 125/317 (39%), Gaps = 34/317 (10%)
Query: 105 SPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSF 163
SP+ + +V + + D ++ ++ M G + + + +++ RF +A+
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475
Query: 164 DVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKE 223
M GI D+ NSL+ + + E V+ + P+ ++ + G+ +
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535
Query: 224 GNAAKAKTTFGEM---------VIRVGWSKE------------------------NVMAY 250
A A EM V+ G E + Y
Sbjct: 536 SEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTY 595
Query: 251 DAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVA 310
+ L + ++++ + M+ P + + ++ F K + A ++D MV
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Query: 311 GGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRE 370
G+ PN+I+YN ++G C +GE++ A LLDEM + G P+++TY I ++ + E
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE 715
Query: 371 TESFFAEMVKNEWPPTS 387
F EM P S
Sbjct: 716 AFRLFDEMKLKGLVPDS 732
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 132/359 (36%), Gaps = 5/359 (1%)
Query: 131 SMKQEGVLTLR-TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEE 189
SM +G++ L+ T+ C R +A MD+ G+ D + L+ +
Sbjct: 267 SMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGR 326
Query: 190 NQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMA 249
N + E V I + + KEG KAK F M+ A
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI--ASGLIPQAQA 384
Query: 250 YDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMV 309
Y + + R + + L MK + + + D A + M+
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 310 AGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVR 369
A G PN+++Y +I N +A R+L EM G PD YN + L + K++
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 370 ETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALL 429
E SF EMV+N P + A I+ + + +A + M E V P L+
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Query: 430 IGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRKDRFDSLFRRWKAR 488
C + E M+D+ I+ T L + + + D + +FR + +
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK--NDKVDDAEEIFREMRGK 621
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 111/280 (39%), Gaps = 22/280 (7%)
Query: 120 ELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVN 179
EL D M +++ + V T+ + YC +G EA FD M G+ D
Sbjct: 683 ELLDEM--SVKGLHPNAV----TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736
Query: 180 SLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIR 239
+L+ CC N A+ F K A F L+ W + + KT E++ R
Sbjct: 737 TLVDG-CCRLNDVERAITIFGTNKKGCASSTAPFNALIN-WVFKFGKTELKT---EVLNR 791
Query: 240 V------GWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFV 293
+ + K N + Y+ + L + +E M++ + P + +T L+ +
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851
Query: 294 KENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSL 353
K A P++D +A GI P+ IMY+ +I G A L+D+M A D
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911
Query: 354 -----TYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSS 388
T + + ++ E MV+ ++ P S+
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSA 951
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 141/329 (42%), Gaps = 2/329 (0%)
Query: 143 FVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV 202
F + S C ++A+ F M+ GI +VV +SL+S +C + + + +
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 203 KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQ 262
+ KI P+ +F L++ + KEG +A+ +M+ R ++ Y++ + +
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR--SIDPDIFTYNSLINGFCMHDR 305
Query: 263 IEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNA 322
+++ + + M DCFP L + + F K L+ M G++ + + Y
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 323 MIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE 382
+I ++G+ DNA ++ +MV G PD +TY+++ L N K+ + F M K+E
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 383 WPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVR 442
I + + +++ + VKP + N ++ G+CS E
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 443 RHAEDMLDRRIIIYESTMNKLKDAFYTEG 471
+ M + + T N L A +G
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 151/365 (41%), Gaps = 5/365 (1%)
Query: 109 WNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMD 167
+N ++ + K + FD + M++ G+ L T+ +C + + A+ M
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 168 NHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNA 226
G E +V ++SLL+ C + S A+ ++ V+ PD +F L+ G A
Sbjct: 73 KLGYEPSIVTLSSLLNGY-CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 227 AKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFT 286
++A MV R + N++ Y + L + I+ L M+ + F
Sbjct: 132 SEAVALVDRMVQR--GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 287 YALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLH 346
+D K A+ L+ M GI PN++ Y+++I C+ G +A +LL +M+
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 347 GAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAA 406
P+ +T+N + V+ K E E +M+K P + I D + A
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 407 HEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDA 466
+++ +MV P ++ N L+ G C R + +M R ++ T L
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Query: 467 FYTEG 471
+ +G
Sbjct: 370 LFHDG 374
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 127/294 (43%), Gaps = 4/294 (1%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
TF + + + +EA+ D M G + ++V +++ +C + A +
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC-KRGDIDLAFNLLNK 175
Query: 202 VKG-KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
++ KI D F +++ K + A F EM + + NV+ Y + + L
Sbjct: 176 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK--GIRPNVVTYSSLISCLCSY 233
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
+ + + L M + P L F +D FVKE A L D M+ I P++ Y
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
N++I C + +D A ++ + MV FPD TYN + K ++K+V + F EM
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353
Query: 381 NEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICS 434
+ I LF D + A +++ MV + V P + + LL G+C+
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 407
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 115/266 (43%), Gaps = 2/266 (0%)
Query: 212 SFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLK 271
++ IL+ + + + A G+M +++G+ + +++ + L +I + + +
Sbjct: 47 TYNILINCFCRRSQISLALALLGKM-MKLGY-EPSIVTLSSLLNGYCHGKRISDAVALVD 104
Query: 272 VMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNG 331
M + P FT + N A+ A+ L D MV G PNL+ Y ++ C G
Sbjct: 105 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 164
Query: 332 EVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCA 391
++D AF LL++M D + +N I L + + V + + F EM P +
Sbjct: 165 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 224
Query: 392 AAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDR 451
+ I+ L A ++ S M+E + P + NAL+ +F E + +DM+ R
Sbjct: 225 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
Query: 452 RIIIYESTMNKLKDAFYTEGRSRKDR 477
I T N L + F R K +
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAK 310
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 109/259 (42%), Gaps = 4/259 (1%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
T+ S +C+ R ++A F+ M + D+ N+L+ C + + E F E
Sbjct: 292 TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC-KSKRVEDGTELFRE 350
Query: 202 VKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
+ + + D ++ L++G +G+ A+ F +MV ++M Y L L
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV--SDGVPPDIMTYSILLDGLCNN 408
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
++E+ L M+ + + +T ++ K L+ ++ G+ PN++ Y
Sbjct: 409 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
N MI C+ + A+ LL +M G PDS TYN + + +R+ + EM
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Query: 381 NEWPPTSSNCAAAIAMLFD 399
+ +S ML D
Sbjct: 529 CRFVGDASTIGLVANMLHD 547
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 108/271 (39%), Gaps = 3/271 (1%)
Query: 140 LRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFF 199
L TF + ++ G+F EA D M I+ D+ NSL++ C + F
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314
Query: 200 EEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLR 259
V PD D++ L++G+ K F EM R G + V Y + L
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR-GLVGDTV-TYTTLIQGLFH 372
Query: 260 ASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIM 319
+ + K M P + ++ LD A+ ++D M I ++ +
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 320 YNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMV 379
Y MI C G+VD+ + L + L G P+ +TYN + L + ++E + +M
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 380 KNEWPPTSSNCAAAI-AMLFDCDDPEAAHEI 409
++ P S I A L D D +A I
Sbjct: 493 EDGPLPDSGTYNTLIRAHLRDGDKAASAELI 523
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 105/242 (43%), Gaps = 3/242 (1%)
Query: 232 TFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDV 291
+ GE + R+G S N+ Y+ + R SQI L L M P + + L+
Sbjct: 31 SLGEKMQRLGIS-HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 89
Query: 292 FVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMI-GLQCNNGEVDNAFRLLDEMVLHGAFP 350
+ + A+ L D MV G P+ I + +I GL +N + A L+D MV G P
Sbjct: 90 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN-KASEAVALVDRMVQRGCQP 148
Query: 351 DSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIW 410
+ +TY ++ L + + + +M + I L + A ++
Sbjct: 149 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 208
Query: 411 SYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTE 470
M ++P + ++L+ +CS R+S+ + DM++++I T N L DAF E
Sbjct: 209 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268
Query: 471 GR 472
G+
Sbjct: 269 GK 270
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 152/384 (39%), Gaps = 39/384 (10%)
Query: 105 SPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL----TLRTFVSAF------------- 147
+P+++N +++ K LFD W M G+ T ++ A
Sbjct: 307 TPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELL 366
Query: 148 ---------------QSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQT 192
Y G+F EA + FD + I +V N+L+ +C E
Sbjct: 367 SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLC-ESGNL 425
Query: 193 STAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYD 251
A EE+ + I PD ++ L++G+ K GN + A + EM +R G K + AY
Sbjct: 426 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEM-LRKGI-KPDGYAYT 483
Query: 252 AFLLTLLRASQIEEVLRFLK--VMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMV 309
+ LR ++ R + V DH P L + +D K + AI +
Sbjct: 484 TRAVGELRLGDSDKAFRLHEEMVATDHHA-PDLTIYNVRIDGLCKVGNLVKAIEFQRKIF 542
Query: 310 AGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVR 369
G++P+ + Y +I NG+ A L DEM+ +P +TY ++ + ++
Sbjct: 543 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 602
Query: 370 ETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALL 429
+ + EM K P A + + + + A+ M E + P S L+
Sbjct: 603 QAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662
Query: 430 IGICSLSRFSEVRRHAEDMLDRRI 453
C ++ EV + ++MLD+ I
Sbjct: 663 SKNCDFEKWEEVVKLYKEMLDKEI 686
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 124/315 (39%), Gaps = 40/315 (12%)
Query: 157 NEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAI 215
N+A ++ M HGI V+ N++L S C + + + E+K + I ++ I
Sbjct: 220 NKASAVYETMIEHGIMPTVITFNTMLDS-CFKAGDLERVDKIWLEMKRRNIEFSEVTYNI 278
Query: 216 LLEGWEKEGNAAKAKTTFGEMV-------------IRVGWSKENVM-------------- 248
L+ G+ K G +A+ G+M + G+ K+ +
Sbjct: 279 LINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAG 338
Query: 249 ------AYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAI 302
Y+ ++ L +I++ L M P + + + ++K A
Sbjct: 339 IYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEAS 394
Query: 303 PLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCL 362
L+D + AG I P+++ YN +I C +G ++ A RL +EM FPD +TY + K
Sbjct: 395 LLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGF 454
Query: 363 VRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMV-ENHVKPL 421
V+N + + EM++ P D + A + MV +H P
Sbjct: 455 VKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPD 514
Query: 422 HESANALLIGICSLS 436
N + G+C +
Sbjct: 515 LTIYNVRIDGLCKVG 529
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 88/207 (42%), Gaps = 6/207 (2%)
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-KGKIAPDGDSFAILLEGWEKEGN 225
D+H D+ N + +C N A+EF ++ + + PD ++ ++ G+ + G
Sbjct: 509 DHHA--PDLTIYNVRIDGLCKVGNLVK-AIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQ 565
Query: 226 AAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFF 285
A+ + EM+ + + +V+ Y + +A ++E+ ++ MK P +
Sbjct: 566 FKMARNLYDEMLRKRLYP--SVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTH 623
Query: 286 TYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVL 345
L K + A M GI PN Y +I C+ + + +L EM+
Sbjct: 624 NALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLD 683
Query: 346 HGAFPDSLTYNMIFKCLVRNKKVRETE 372
PD T+ +FK L ++ + RE E
Sbjct: 684 KEIEPDGYTHRALFKHLEKDHESREVE 710
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 128/300 (42%), Gaps = 4/300 (1%)
Query: 170 GIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNAAK 228
G E D+V +NSLL+ C N+ S A+ ++ V+ PD +F L+ G A++
Sbjct: 143 GYEPDIVTLNSLLNGFC-HGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASE 201
Query: 229 AKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYA 288
A MV R + +++ Y A + L + + L L M+ + ++
Sbjct: 202 AVALIDRMVQR--GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 259
Query: 289 LDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGA 348
+D K A+ L+ M G+ PN+I Y+++I CN G +A RLL +M+
Sbjct: 260 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI 319
Query: 349 FPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHE 408
P+ +T++ + V+ K+ + E + EM+K P ++ I D A +
Sbjct: 320 NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQ 379
Query: 409 IWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFY 468
+ M+ P + N L+ G C R + +M R ++ T L F+
Sbjct: 380 MLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFF 439
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 113/243 (46%), Gaps = 2/243 (0%)
Query: 143 FVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV 202
+ + S C ++A+ F M+N G+ +V+ +SL+S +C + + + +
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 203 KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQ 262
+ KI P+ +F+ L++ + K+G KA+ + EM+ R N+ Y + + +
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR--SIDPNIFTYSSLINGFCMLDR 373
Query: 263 IEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNA 322
+ E + L++M DC P + + ++ F K + L+ M G++ N + Y
Sbjct: 374 LGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTT 433
Query: 323 MIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE 382
+I + DNA + +MV G P+ LTYN++ L +N K+ + F + ++
Sbjct: 434 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 493
Query: 383 WPP 385
P
Sbjct: 494 MEP 496
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 130/300 (43%), Gaps = 4/300 (1%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
TF + + + +EA+ D M G + D+V ++++ +C + T A+ +
Sbjct: 185 TFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLC-KRGDTDLALNLLNK 243
Query: 202 VKG-KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
++ KI + ++ +++ K + A F EM + + NV+ Y + + L
Sbjct: 244 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK--GVRPNVITYSSLISCLCNY 301
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
+ + R L M + P L F+ +D FVK+ A L++ M+ I PN+ Y
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
+++I C + A ++L+ M+ P+ +TYN + + K+V + F EM +
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ 421
Query: 381 NEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSE 440
+ I F D + A ++ MV V P + N LL G+C + ++
Sbjct: 422 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 481
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 138/320 (43%), Gaps = 43/320 (13%)
Query: 156 FNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFE--EVKGKIAPDGDSF 213
++AI F VM ++ + LLS+I + N+ + F E E+ G I+ + ++
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIA-KMNKFDLVISFGEKMEILG-ISHNLYTY 116
Query: 214 AILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVM 273
IL+ + + + A G+M +++G+ + +++ ++ L ++I + + + M
Sbjct: 117 NILINCFCRCSRLSLALALLGKM-MKLGY-EPDIVTLNSLLNGFCHGNRISDAVALVDQM 174
Query: 274 KDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEV 333
+ P FT + N A+ A+ L D MV G P+L+ Y A++ C G+
Sbjct: 175 VEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT 234
Query: 334 DNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAA 393
D A LL++M + + Y+ + L + + + + F EM
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM--------------- 279
Query: 394 IAMLFDCDDPEAAHEIWSYMVENH-VKPLHESANALLIGICSLSRFSEVRRHAEDMLDRR 452
EN V+P + ++L+ +C+ R+S+ R DM++R+
Sbjct: 280 ---------------------ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 453 IIIYESTMNKLKDAFYTEGR 472
I T + L DAF +G+
Sbjct: 319 INPNLVTFSALIDAFVKKGK 338
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 143/342 (41%), Gaps = 3/342 (0%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLR-TFVSAFQSYCVAGRFNEAIMSFDVM 166
WN ++ + G+N + + + MK+ G + R TF + +Y G F +A+ + M
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNA 226
+ G+ D+ N++L+++ + E G+ P+ ++ LL + G
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY-ANGKE 574
Query: 227 AKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFT 286
+ E V G + + +L + + E R +K+ P +
Sbjct: 575 IGLMHSLAEEVYS-GVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLN 633
Query: 287 YALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLH 346
+ ++ + A A + D M G P++ YN+++ + + + + +L E++
Sbjct: 634 SMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAK 693
Query: 347 GAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAA 406
G PD ++YN + RN ++R+ F+EM + P I E A
Sbjct: 694 GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEA 753
Query: 407 HEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDM 448
+ YM+++ +P + N+++ G C L+R E + ED+
Sbjct: 754 IGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/418 (19%), Positives = 166/418 (39%), Gaps = 43/418 (10%)
Query: 91 AVKFFRWAGRLQKHSPHAWN----LMVDLLGKNELFDPMWDAIRSMKQEGV-LTLRTFVS 145
A++ F W + + + N +++ +LGK + ++++G L + ++ S
Sbjct: 154 ALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTS 213
Query: 146 AFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSI-------------------- 185
++ +GR+ EA+ F M+ G + ++ N +L+
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273
Query: 186 --------------CCEENQT-STAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKA 229
CC+ A + FEE+K + D ++ LL+ + K +A
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 230 KTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYAL 289
EMV+ G+S +++ Y++ + R ++E + M + P + +T L
Sbjct: 334 MKVLNEMVLN-GFSP-SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 290 DVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAF 349
F + A+ +++ M G PN+ +NA I + N G+ ++ DE+ + G
Sbjct: 392 SGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 451
Query: 350 PDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEI 409
PD +T+N + +N E F EM + + P I+ C E A +
Sbjct: 452 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTV 511
Query: 410 WSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAF 467
+ M++ V P + N +L + + + + +M D R E T L A+
Sbjct: 512 YRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 130/314 (41%), Gaps = 4/314 (1%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
TF + + Y G+F E + FD ++ G+ D+V N+LL+ + + F E
Sbjct: 421 TFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Query: 202 VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRAS 261
+ P+ ++F L+ + + G+ +A T + M + G + + + Y+ L L R
Sbjct: 481 KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM-LDAGVTPD-LSTYNTVLAALARGG 538
Query: 262 QIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYN 321
E+ + L M+D C P + L + + L + + +G I P ++
Sbjct: 539 MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLK 598
Query: 322 AMIGLQCNNGE-VDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
++ L C+ + + A R E+ G PD T N + R + V + M +
Sbjct: 599 TLV-LVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKE 657
Query: 381 NEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSE 440
+ P+ + + + M D + EI ++ +KP S N ++ C +R +
Sbjct: 658 RGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRD 717
Query: 441 VRRHAEDMLDRRII 454
R +M + I+
Sbjct: 718 ASRIFSEMRNSGIV 731
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 141/335 (42%), Gaps = 7/335 (2%)
Query: 122 FDPMWDAIRSMKQEGVLTLRTFV--SAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVN 179
D +W I MK++G L +++ S C + EA +F M GI D V
Sbjct: 297 LDKVWKLIEVMKRKG-LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 180 SLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVI 238
+L+ C + A +FF E+ + I PD ++ ++ G+ + G+ +A F EM
Sbjct: 356 TLIDGFC-KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 239 RVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDA 298
+ G ++V + + +A +++ R M C P + +T +D KE D
Sbjct: 415 K-GLEPDSV-TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 299 AHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMI 358
A L M G+ PN+ YN+++ C +G ++ A +L+ E G D++TY +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 359 FKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHV 418
++ ++ + + EM+ PT + E ++ ++M+ +
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 419 KPLHESANALLIGICSLSRFSEVRRHAEDMLDRRI 453
P + N+L+ C + +DM R +
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 132/328 (40%), Gaps = 7/328 (2%)
Query: 141 RTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFE 200
R F FQ G EA F+ M N+G+ V + N L+ + + +T+TA+ F
Sbjct: 176 RVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFR 235
Query: 201 EV-KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLR 259
E + + + S+ I++ + G +A M ++ G++ + V++Y + R
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK-GYTPD-VISYSTVVNGYCR 293
Query: 260 ASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIM 319
++++V + ++VMK P + + + + A A + M+ GI+P+ ++
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 320 YNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMV 379
Y +I C G++ A + EM PD LTY I + + E F EM
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 380 KNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFS 439
P S I + A + ++M++ P + L+ G+C
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 440 EVRRHAEDM----LDRRIIIYESTMNKL 463
+M L I Y S +N L
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGL 501
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 141/335 (42%), Gaps = 7/335 (2%)
Query: 122 FDPMWDAIRSMKQEGVLTLRTFV--SAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVN 179
D +W I MK++G L +++ S C + EA +F M GI D V
Sbjct: 297 LDKVWKLIEVMKRKG-LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 180 SLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVI 238
+L+ C + A +FF E+ + I PD ++ ++ G+ + G+ +A F EM
Sbjct: 356 TLIDGFC-KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 239 RVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDA 298
+ G ++V + + +A +++ R M C P + +T +D KE D
Sbjct: 415 K-GLEPDSV-TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 299 AHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMI 358
A L M G+ PN+ YN+++ C +G ++ A +L+ E G D++TY +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 359 FKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHV 418
++ ++ + + EM+ PT + E ++ ++M+ +
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 419 KPLHESANALLIGICSLSRFSEVRRHAEDMLDRRI 453
P + N+L+ C + +DM R +
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 132/328 (40%), Gaps = 7/328 (2%)
Query: 141 RTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFE 200
R F FQ G EA F+ M N+G+ V + N L+ + + +T+TA+ F
Sbjct: 176 RVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFR 235
Query: 201 EV-KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLR 259
E + + + S+ I++ + G +A M ++ G++ + V++Y + R
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK-GYTPD-VISYSTVVNGYCR 293
Query: 260 ASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIM 319
++++V + ++VMK P + + + + A A + M+ GI+P+ ++
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 320 YNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMV 379
Y +I C G++ A + EM PD LTY I + + E F EM
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 380 KNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFS 439
P S I + A + ++M++ P + L+ G+C
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 440 EVRRHAEDM----LDRRIIIYESTMNKL 463
+M L I Y S +N L
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGL 501
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 138/319 (43%), Gaps = 4/319 (1%)
Query: 154 GRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDS 212
G+ ++ F M G V N ++ +C +E A FEE+K + + PD +
Sbjct: 241 GKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMC-KEGDVEAARGLFEEMKFRGLVPDTVT 299
Query: 213 FAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKV 272
+ +++G+ K G F EM + + +V+ Y+A + + ++ L F +
Sbjct: 300 YNSMIDGFGKVGRLDDTVCFFEEM--KDMCCEPDVITYNALINCFCKFGKLPIGLEFYRE 357
Query: 273 MKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGE 332
MK + P + ++ +D F KE AI + M G++PN Y ++I C G
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 333 VDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAA 392
+ +AFRL +EM+ G + +TY + L ++++E E F +M P ++ A
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477
Query: 393 AIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRR 452
I + + A E+ + + +KP + G+CSL + + +M +
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 453 IIIYESTMNKLKDAFYTEG 471
I L DA++ G
Sbjct: 538 IKANSLIYTTLMDAYFKSG 556
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 141/344 (40%), Gaps = 6/344 (1%)
Query: 93 KFFR-WAGRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSY 150
+FF+ G + + +N+M+D + K + MK G++ T+ S +
Sbjct: 248 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 151 CVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPD 209
GR ++ + F+ M + E DV+ N+L++ C+ + +EF+ E+KG + P+
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCF-CKFGKLPIGLEFYREMKGNGLKPN 366
Query: 210 GDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRF 269
S++ L++ + KEG +A + +M RVG N Y + + + + + R
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMR-RVGLVP-NEYTYTSLIDANCKIGNLSDAFRL 424
Query: 270 LKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCN 329
M + +T +D A L+ M G++PNL YNA+I
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 330 NGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSN 389
+D A LL+E+ G PD L Y L +K+ + EM + S
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 390 CAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGIC 433
+ F +P + M E ++ + L+ G+C
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 88/235 (37%), Gaps = 5/235 (2%)
Query: 237 VIRVGWSKENVMA-----YDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDV 291
V V WS NV +DA L+ +EE ++ MK FP + L
Sbjct: 177 VFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHR 236
Query: 292 FVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPD 351
F K + M+ G P + YN MI C G+V+ A L +EM G PD
Sbjct: 237 FAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPD 296
Query: 352 SLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWS 411
++TYN + + ++ +T FF EM P A I E +
Sbjct: 297 TVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYR 356
Query: 412 YMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDA 466
M N +KP S + L+ C + + DM ++ E T L DA
Sbjct: 357 EMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 411
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 158/373 (42%), Gaps = 18/373 (4%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMK----QEGVLTLRTFVSAFQSYCVAGRFNEAIMSF 163
+N M+D GK D MK + V+T ++ F C G+ + +
Sbjct: 299 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCF---CKFGKLPIGLEFY 355
Query: 164 DVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAILLEGWEK 222
M +G++ +VV+ ++L+ + C+E A++F+ +++ + P+ ++ L++ K
Sbjct: 356 REMKGNGLKPNVVSYSTLVDAF-CKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 414
Query: 223 EGNAAKAKTTFGEMV-IRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPG 281
GN + A EM+ + V W NV+ Y A + L A +++E M P
Sbjct: 415 IGNLSDAFRLGNEMLQVGVEW---NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471
Query: 282 LKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLD 341
L + + FVK + A+ L + + GI P+L++Y I C+ +++ A +++
Sbjct: 472 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMN 531
Query: 342 EMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCD 401
EM G +SL Y + ++ E EM + + T I L C
Sbjct: 532 EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL--CK 589
Query: 402 DPEAAHEIWSYMVENHVKPLHESA---NALLIGICSLSRFSEVRRHAEDMLDRRIIIYES 458
+ + + + ++ L +A A++ G+C ++ E M+ + ++ +
Sbjct: 590 NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRT 649
Query: 459 TMNKLKDAFYTEG 471
L D + +G
Sbjct: 650 AYTSLMDGNFKQG 662
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 126/333 (37%), Gaps = 44/333 (13%)
Query: 127 DAIR---SMKQEGV-LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLL 182
DA R M Q GV + T+ + C A R EA F MD G+ ++ + N+L+
Sbjct: 420 DAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI 479
Query: 183 SSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVG 241
+N A+E E+KG+ I PD + + G AK EM +
Sbjct: 480 HGFVKAKNM-DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM--KEC 536
Query: 242 WSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDC----------FPGL--------- 282
K N + Y + ++ E L L MK+ D GL
Sbjct: 537 GIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKA 596
Query: 283 -----------------KFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIG 325
FT +D K+N A L++ MV G++P+ Y +++
Sbjct: 597 VDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD 656
Query: 326 LQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPP 385
G V A L D+M G D L Y + L ++++ SF EM+ P
Sbjct: 657 GNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
Query: 386 TSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHV 418
C + + ++ + A E+ SY++++ +
Sbjct: 717 DEVLCISVLKKHYELGCIDEAVELQSYLMKHQL 749
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/366 (19%), Positives = 144/366 (39%), Gaps = 5/366 (1%)
Query: 91 AVKFFR-WAGRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQ 148
++F+R G K + +++ +VD K + M++ G++ T+ S
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 149 SYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAP 208
+ C G ++A + M G+E +VV +L+ +C E F + + P
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Query: 209 DGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLR 268
+ S+ L+ G+ K N +A E+ R K +++ Y F+ L +IE
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGR--GIKPDLLLYGTFIWGLCSLEKIEAAKV 528
Query: 269 FLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQC 328
+ MK+ +T +D + K + + L D M I ++ + +I C
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588
Query: 329 NNGEVDNAFRLLDEMVL-HGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTS 387
N V A + + G ++ + + L ++ +V + F +MV+ P
Sbjct: 589 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDR 648
Query: 388 SNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAED 447
+ + + F + A + M E +K + +L+ G+ ++ + R E+
Sbjct: 649 TAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEE 708
Query: 448 MLDRRI 453
M+ I
Sbjct: 709 MIGEGI 714
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 159/395 (40%), Gaps = 49/395 (12%)
Query: 86 NYPHSAVKFFRWAGRLQ-KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTF 143
N + + FR L H +++ ++D + + M + G ++ TF
Sbjct: 93 NKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTF 152
Query: 144 VSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK 203
S +C RF EA+ D + G E +VV N+++ S+C E+ Q +TA++ + +K
Sbjct: 153 GSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLC-EKGQVNTALDVLKHMK 211
Query: 204 GKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQI 263
+M IR +V+ Y++ + L +
Sbjct: 212 -------------------------------KMGIR-----PDVVTYNSLITRLFHSGTW 235
Query: 264 EEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAM 323
R L M P + F+ +DV+ KE A ++ M+ + PN++ YN++
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Query: 324 IGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEW 383
I C +G +D A ++L+ +V G FP+++TYN + + K+V + M ++
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Query: 384 PPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRR 443
+ AA ++ MV V P + N LL G+C + +
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALV 415
Query: 444 HAEDMLDRRIIIYESTMN----------KLKDAFY 468
ED+ + ++ T N K++DA+Y
Sbjct: 416 RLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWY 450
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 158/385 (41%), Gaps = 23/385 (5%)
Query: 112 MVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVS-AFQSYCVAGRFNEAIMSFDVMDNHG 170
++ ++ K +D + M+ G+ L + C++ + A M G
Sbjct: 89 LLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLG 148
Query: 171 IEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAILLEGWEKEGNAAKA 229
E D+V SLL+ C N+ A+ F+++ G P+ ++ L+ K + A
Sbjct: 149 FEPDLVTFTSLLNGYC-HWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 230 KTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYAL 289
F +M S+ NV+ Y+A + L + + L+ M P + FT +
Sbjct: 208 VELFNQM--GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265
Query: 290 DVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAF 349
D FVK A L++ M+ + P++ Y ++I C G +D A ++ M +G +
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325
Query: 350 PDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEI 409
P+ + Y + ++K+V + F EM + + I P+ A E+
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 410 WSYMVENHVKPLHESANALLIGIC-------SLSRFSEVRRHAED--MLDRRIIIYE-ST 459
++ M P + N LL G+C +L F +R+ D ++ III
Sbjct: 386 FNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK 445
Query: 460 MNKLKDAFYTEGRSRKDRFDSLFRR 484
+ K++DAF D F SLF +
Sbjct: 446 LGKVEDAF--------DLFCSLFSK 462
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 99/266 (37%), Gaps = 2/266 (0%)
Query: 123 DPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLL 182
D W MK+ + TF + ++ G+ EA ++VM + DV SL+
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 183 SSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGW 242
+ +C F+ + P+ + L+ G+ K F EM +
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK--G 358
Query: 243 SKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAI 302
N + Y + + + M P ++ + LD A+
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL 418
Query: 303 PLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCL 362
+++ M + N++ Y +I C G+V++AF L + G P+ +TY +
Sbjct: 419 MIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGF 478
Query: 363 VRNKKVRETESFFAEMVKNEWPPTSS 388
R + E +S F +M ++ + P S
Sbjct: 479 CRRGLIHEADSLFKKMKEDGFLPNES 504
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 89/224 (39%)
Query: 249 AYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAM 308
+Y L L Q + L M P + FT L V K N I L++ M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 309 VAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKV 368
GI P L N ++ C + + A L +M+ G PD +T+ + ++
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 369 RETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANAL 428
+ + F +++ + P I L A E+++ M N +P + NAL
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 429 LIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR 472
+ G+C + R+ + DM+ RRI T L DAF G+
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGK 273
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 151/382 (39%), Gaps = 42/382 (10%)
Query: 107 HAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDV 165
+N+++ + K + F+ + M +EG + ++ + AG+ ++A+ FD
Sbjct: 150 QTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDE 209
Query: 166 MDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV--KGKIAPDGDSFAILLEG---- 219
M G+ DV N L+ E++ TAME ++ + + P+ + I++ G
Sbjct: 210 MSERGVAPDVTCYNILIDGFLKEKDH-KTAMELWDRLLEDSSVYPNVKTHNIMISGLSKC 268
Query: 220 ---------WEK----------------------EGNAAKAKTTFGEMVIRVGWSKENVM 248
WE+ GN KA++ F E+ R + +V+
Sbjct: 269 GRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERK--ASIDVV 326
Query: 249 AYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAM 308
Y+ L R +I+E L ++M +H + + + ++ A +W M
Sbjct: 327 TYNTMLGGFCRCGKIKESLELWRIM-EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLM 385
Query: 309 VAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKV 368
A G + Y I C NG V+ A ++ E+ G D Y I CL + K++
Sbjct: 386 PAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRL 445
Query: 369 RETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANAL 428
E + EM K+ S C A I L A M +N +P S N L
Sbjct: 446 EEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNIL 505
Query: 429 LIGICSLSRFSEVRRHAEDMLD 450
+ G+C +F E ++ML+
Sbjct: 506 ICGLCKAGKFGEASAFVKEMLE 527
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 157/370 (42%), Gaps = 10/370 (2%)
Query: 110 NLMVDLLGKNELFDPMWDAIRSMKQ-EGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDN 168
N+M+ L K D MKQ E L T+ S C AG ++A F+ +D
Sbjct: 259 NIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDE 318
Query: 169 HGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAK 228
DVV N++L C + ++E + ++ K + + S+ IL++G + G +
Sbjct: 319 RKASIDVVTYNTMLGGFC-RCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDE 377
Query: 229 AKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPG-LKFFTY 287
A + M + G++ + Y F+ L + + L VM++ + G L + Y
Sbjct: 378 ATMIWRLMPAK-GYAADKT-TYGIFIHGLCVNGYVNKAL---GVMQEVESSGGHLDVYAY 432
Query: 288 A--LDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVL 345
A +D K+ A L M G+ N + NA+IG + + A L EM
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492
Query: 346 HGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEA 405
+G P ++YN++ L + K E +F EM++N W P + + L +
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDL 552
Query: 406 AHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKD 465
A E+W +++ ++ N L+ G+CS+ + + +M R T N L +
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612
Query: 466 AFYTEGRSRK 475
F+ G S +
Sbjct: 613 GFFKVGDSNR 622
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 116/259 (44%), Gaps = 5/259 (1%)
Query: 107 HAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVA-GRFNEAIMSFDV 165
+A+ ++D L K + + + ++ M + GV +A + R EA
Sbjct: 430 YAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLRE 489
Query: 166 MDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEG 224
M +G VV+ N L+ +C + + A F +E ++ PD +++ILL G ++
Sbjct: 490 MGKNGCRPTVVSYNILICGLC-KAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDR 548
Query: 225 NAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKF 284
A + + ++ G + +VM ++ + L ++++ + + M+ +C L
Sbjct: 549 KIDLALELWHQF-LQSGL-ETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVT 606
Query: 285 FTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMV 344
+ ++ F K D+ A +W M G+ P++I YN ++ C V A D+
Sbjct: 607 YNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDAR 666
Query: 345 LHGAFPDSLTYNMIFKCLV 363
HG FP T+N++ + +V
Sbjct: 667 NHGIFPTVYTWNILVRAVV 685
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 136/346 (39%), Gaps = 45/346 (13%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAF-QSYCVAGRFNEAIMSFDVM 166
++N+++ L +N D R M +G +T F CV G N+A+ +
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 420
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNA 226
++ G DV A S++ +C ++ + E K + + L+ G ++
Sbjct: 421 ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480
Query: 227 AKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFT 286
+A EM + V++Y+ + L +A + E F+K M ++ P LK ++
Sbjct: 481 GEASFFLREM--GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYS 538
Query: 287 YALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLH 346
L ++ A+ LW + G+ +++M+N +I C+ G++D+A ++ M
Sbjct: 539 ILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHR 598
Query: 347 GAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAA 406
+ +TYN + E FF D A
Sbjct: 599 NCTANLVTYNTLM------------EGFFK-----------------------VGDSNRA 623
Query: 407 HEIWSYMVENHVKPLHESANALLIGIC-------SLSRFSEVRRHA 445
IW YM + ++P S N ++ G+C ++ F + R H
Sbjct: 624 TVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHG 669
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 99/239 (41%), Gaps = 12/239 (5%)
Query: 256 TLLRASQIEEVLRFLKVMKD-HDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIM 314
T + S ++ L K M++ C P ++ + L+ FV+ L+ G+
Sbjct: 87 TYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVA 146
Query: 315 PNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESF 374
PNL YN +I + C E + A LD M G PD +Y+ + L + K+ +
Sbjct: 147 PNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALEL 206
Query: 375 FAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVEN-HVKPLHESANALLIGIC 433
F EM + P + I D + A E+W ++E+ V P ++ N ++ G+
Sbjct: 207 FDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLS 266
Query: 434 SLSRFSEV----RRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRKDRFDSLFRRWKAR 488
R + R ++ ++ + Y S ++ L DA D+ +S+F R
Sbjct: 267 KCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDA------GNVDKAESVFNELDER 319
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 164/381 (43%), Gaps = 16/381 (4%)
Query: 70 IHPSDDCVREVLKL--SYNYPHSAVKFFRWAGRL--QKHSPHAWNLMVDLLGKNELFDPM 125
+ P + VLKL S P +A F A R HS ++ ++ L + + + +
Sbjct: 3 VFPKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHV 62
Query: 126 WDAIRSMK-QEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVM-DNHGIEKDVVAVNSLLS 183
+ ++ QE +S ++Y ++A+ F M + G E + + N+LL+
Sbjct: 63 SRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLN 122
Query: 184 SICCEEN--QTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVG 241
+ + + + +FE +AP+ ++ +L++ K+ KA+ F + + + G
Sbjct: 123 AFVEAKQWVKVESLFAYFE--TAGVAPNLQTYNVLIKMSCKKKEFEKARG-FLDWMWKEG 179
Query: 242 WSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHA 301
+ K +V +Y + L +A ++++ L M + P + + +D F+KE D A
Sbjct: 180 F-KPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTA 238
Query: 302 IPLWDAMVA-GGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFK 360
+ LWD ++ + PN+ +N MI G VD+ ++ + M + D TY+ +
Sbjct: 239 MELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIH 298
Query: 361 CLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMV-ENHVK 419
L V + ES F E+ + + + C + + E+W M +N V
Sbjct: 299 GLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVN 358
Query: 420 PLHESANALLIGICSLSRFSE 440
+ S N L+ G+ + E
Sbjct: 359 IV--SYNILIKGLLENGKIDE 377
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 96/231 (41%), Gaps = 3/231 (1%)
Query: 247 VMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWD 306
+ +Y+ L + A Q +V + P L+ + + + K+ + A D
Sbjct: 114 IRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLD 173
Query: 307 AMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNK 366
M G P++ Y+ +I G++D+A L DEM G PD YN++ ++ K
Sbjct: 174 WMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEK 233
Query: 367 KVRETESFFAEMVKNE--WPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHES 424
+ + ++++ +P ++ I+ L C + +IW M +N + +
Sbjct: 234 DHKTAMELWDRLLEDSSVYPNVKTH-NIMISGLSKCGRVDDCLKIWERMKQNEREKDLYT 292
Query: 425 ANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRK 475
++L+ G+C + ++ +R+ I T N + F G+ ++
Sbjct: 293 YSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKE 343
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 113/251 (45%), Gaps = 2/251 (0%)
Query: 154 GRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSF 213
G +A F HG+ + + N L+ + C ++ + F + ++ + PD DS+
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 214 AILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVM 273
IL++G+ ++G A +M+ + G+ + ++Y L +L R +Q+ E + L M
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNK-GFVPDR-LSYTTLLNSLCRKTQLREAYKLLCRM 286
Query: 274 KDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEV 333
K C P L + + F +E+ A A + D M++ G PN + Y +IG C+ G
Sbjct: 287 KLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMF 346
Query: 334 DNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAA 393
D + L+EM+ G P N + K KV E ++KN S
Sbjct: 347 DEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMV 406
Query: 394 IAMLFDCDDPE 404
I ++ + D+ E
Sbjct: 407 IPLICNEDESE 417
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%)
Query: 263 IEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNA 322
+++ K + H P + + + F +D + A L+ M+ ++P++ Y
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 323 MIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE 382
+I C G+V+ A LLD+M+ G PD L+Y + L R ++RE M
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG 290
Query: 383 WPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVR 442
P + I D A ++ M+ N P S L+ G+C F E +
Sbjct: 291 CNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGK 350
Query: 443 RHAEDMLDRRIIIYESTMNKLKDAFYTEGR 472
++ E+M+ + + S N L F + G+
Sbjct: 351 KYLEEMISKGFSPHFSVSNCLVKGFCSFGK 380
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/404 (19%), Positives = 148/404 (36%), Gaps = 42/404 (10%)
Query: 42 VSPVARTLCNLLTRTSPPEIETALTSSGIHPSDDCVR-EVLKLSYNYPHSAVKFFRWAGR 100
SP++ + L +S E + S+ P R + L S + P A + F +A +
Sbjct: 17 TSPLSTSSRFLFYSSSEHEARKPIVSNPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQ 76
Query: 101 LQ--KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGV-LTLRTFVSAFQSYCVAGRFN 157
+HS + +++ LG+ F+ + D + + G LT F + Y A
Sbjct: 77 QPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPE 136
Query: 158 EAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK-GKIAPDGDSFAIL 216
+ + +F M +N +L + A E F+ + + P+ S+ +L
Sbjct: 137 KVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLL 196
Query: 217 LEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDH 276
++ + + + A FG+M+ R
Sbjct: 197 MQAFCLNDDLSIAYQLFGKMLER------------------------------------- 219
Query: 277 DCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNA 336
D P + + + F ++ A+ L D M+ G +P+ + Y ++ C ++ A
Sbjct: 220 DVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREA 279
Query: 337 FRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAM 396
++LL M L G PD + YN + R + + +M+ N P S + I
Sbjct: 280 YKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGG 339
Query: 397 LFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSE 440
L D + + M+ P +N L+ G CS + E
Sbjct: 340 LCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEE 383
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 152/388 (39%), Gaps = 68/388 (17%)
Query: 147 FQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGK 205
S+C GR + AI ++ N I D V N+++S +C E A +F E VK
Sbjct: 136 IHSFCKVGRLSFAI---SLLRNRVISIDTVTYNTVISGLC-EHGLADEAYQFLSEMVKMG 191
Query: 206 IAPDGDSFAILLEGWEKEGNAAKAKTTFGEM---------------------------VI 238
I PD S+ L++G+ K GN +AK E+ ++
Sbjct: 192 ILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMV 251
Query: 239 RVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDA 298
G+ + V+ + + + L + ++ E L+ M++ +P +T +D K N
Sbjct: 252 MSGFDPD-VVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIY 310
Query: 299 AHAIPLWDAMVAGGI-----------------------------------MPNLIMYNAM 323
HA+ L+ MV GI +PN++ Y A+
Sbjct: 311 RHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTAL 370
Query: 324 IGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEW 383
+ C G++ +A ++ +M+ P+ +TY+ + V+ + E S +M
Sbjct: 371 VDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNV 430
Query: 384 PPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRR 443
P I LF E A E+ M V+ + +AL+ + + R EV+
Sbjct: 431 VPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKG 490
Query: 444 HAEDMLDRRIIIYESTMNKLKDAFYTEG 471
+DM+ + + + + L D F+ G
Sbjct: 491 LVKDMVSKGVTLDQINYTSLIDVFFKGG 518
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/343 (19%), Positives = 141/343 (41%), Gaps = 6/343 (1%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVM 166
++N+++ + K W A + M+++G+ + TF S G + +D M
Sbjct: 541 SYNVLISGMLKFGKVGADW-AYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKM 599
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK-GKIAPDGDSFAILLEGWEKEGN 225
+ GI+ +++ N ++ + CE + A+ ++ +I P+ ++ I L+ K
Sbjct: 600 KSCGIKPSLMSCN-IVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKR 658
Query: 226 AAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFF 285
A T E ++ G K + Y+ + TL + ++ + M+ P F
Sbjct: 659 ADAIFKTH-ETLLSYGI-KLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTF 716
Query: 286 TYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVL 345
+ + + A+ + M+ GI PN+ YN +I + G + + L EM
Sbjct: 717 NSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKS 776
Query: 346 HGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEA 405
G PD TYN + + ++ + + + EM+ + P +S I+ +
Sbjct: 777 RGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQ 836
Query: 406 AHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDM 448
A E+ M + V P + ++ G+C L +V + + M
Sbjct: 837 ARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAM 879
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Query: 246 NVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLW 305
+V++Y+ + +L+ ++ + K M++ P + F ++ K+ D+ + LW
Sbjct: 538 DVVSYNVLISGMLKFGKVGADWAY-KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLW 596
Query: 306 DAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRN 365
D M + GI P+L+ N ++G+ C NG+++ A +L++M+L P+ TY + ++
Sbjct: 597 DKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKH 656
Query: 366 KK 367
K+
Sbjct: 657 KR 658
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 123/298 (41%), Gaps = 6/298 (2%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
TF S C G+ E + M+ + + V +L+ S+ + N A+ + +
Sbjct: 261 TFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLF-KANIYRHALALYSQ 319
Query: 202 --VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLR 259
V+G I D + +L++G K G+ +A+ TF +M++ NV+ Y A + L +
Sbjct: 320 MVVRG-IPVDLVVYTVLMDGLFKAGDLREAEKTF-KMLLEDN-QVPNVVTYTALVDGLCK 376
Query: 260 ASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIM 319
A + + M + P + ++ ++ +VK+ A+ L M ++PN
Sbjct: 377 AGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFT 436
Query: 320 YNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMV 379
Y +I G+ + A L EM L G ++ + + L R +++E + +MV
Sbjct: 437 YGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMV 496
Query: 380 KNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSR 437
N + I + F D EAA M E + S N L+ G+ +
Sbjct: 497 SKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK 554
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 155/371 (41%), Gaps = 6/371 (1%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLR-TFVSAFQSYCVAGRFNEAIMSFDVM 166
+N ++ + K + + + MK+ G++ R T+ + YC G EA ++M
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAILLEGWEKEGN 225
+ D+ N L++ + C +E + +K K+ PD ++ L++G + G
Sbjct: 302 KQTNVLPDLCTYNILINGL-CNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGL 360
Query: 226 AAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKD-HDCFPGLKF 284
+ +A+ +M K N + ++ L L + + E V R +K + D H P +
Sbjct: 361 SLEARKLMEQM--ENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVT 418
Query: 285 FTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMV 344
+ + ++K D + A+ + M GI N I N ++ C ++D A LL+
Sbjct: 419 YHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAH 478
Query: 345 LHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPE 404
G D +TY + R +KV + + EM K + PT S + I L E
Sbjct: 479 KRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTE 538
Query: 405 AAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLK 464
A E + + E+ + P + N++++G C R + + + T N L
Sbjct: 539 LAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILL 598
Query: 465 DAFYTEGRSRK 475
+ EG + K
Sbjct: 599 NGLCKEGMTEK 609
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 127/294 (43%), Gaps = 9/294 (3%)
Query: 125 MWDAIRSMK-QEGVLTLRTFVSAFQSYCVA-GRFNEAIMSFDVMDNHGIEKDVVAVNSLL 182
+ DA++S+K Q V+T T + C G EA + M+N G++ + V N L
Sbjct: 332 LMDAMKSLKLQPDVVTYNTLIDG----CFELGLSLEARKLMEQMENDGVKANQVTHNISL 387
Query: 183 SSICCEENQTSTAMEFFEEVK-GKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVG 241
+C EE + + + E V +PD ++ L++ + K G+ + A EM +
Sbjct: 388 KWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQK-- 445
Query: 242 WSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHA 301
K N + + L L + +++E L + + F +E A
Sbjct: 446 GIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKA 505
Query: 302 IPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKC 361
+ +WD M I P + +N++IG C++G+ + A DE+ G PD T+N I
Sbjct: 506 LEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILG 565
Query: 362 LVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVE 415
+ +V + F+ E +K+ + P + C + L E A ++ ++E
Sbjct: 566 YCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE 619
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 88/441 (19%), Positives = 164/441 (37%), Gaps = 66/441 (14%)
Query: 88 PHSAVKFFRWAGRLQKHSPHAWNLMVDLLG------------KNELFDPMWDAIRSMKQE 135
PH A++ F+ RL K P+ L+G E+FD M +K
Sbjct: 147 PHVALQIFQKMIRL-KLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDM------VKIG 199
Query: 136 GVLTLRTFVSAFQSYCVAGRFNEAIMSFDVM-DNHGIEKDVVAVNSLLSSICCEENQTST 194
L ++TF YC+ G+ +A+ + M + D V N++L ++ + +
Sbjct: 200 VSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDL 259
Query: 195 AMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVM----AY 250
+ K + P+ ++ L+ G+ K G+ +A M + NV+ Y
Sbjct: 260 KELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM------KQTNVLPDLCTY 313
Query: 251 DAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVF------------------ 292
+ + L A + E L + MK P + + +D
Sbjct: 314 NILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEN 373
Query: 293 --VKENDAAHAIPL-W---------------DAMVAGGIMPNLIMYNAMIGLQCNNGEVD 334
VK N H I L W + + G P+++ Y+ +I G++
Sbjct: 374 DGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLS 433
Query: 335 NAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAI 394
A ++ EM G +++T N I L + +K+ E + K + I
Sbjct: 434 GALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLI 493
Query: 395 AMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRII 454
F + E A E+W M + + P + N+L+ G+C + +++ + ++
Sbjct: 494 MGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLL 553
Query: 455 IYESTMNKLKDAFYTEGRSRK 475
+ST N + + EGR K
Sbjct: 554 PDDSTFNSIILGYCKEGRVEK 574
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 4/220 (1%)
Query: 143 FVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQ--TSTAMEFFE 200
F A +Y G+ + A+ F M ++ +++ N+LL + + S+A E F+
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193
Query: 201 E-VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLR 259
+ VK ++ + +F +L+ G+ EG A MV + +NV Y+ L + +
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNV-TYNTILKAMSK 252
Query: 260 ASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIM 319
++ ++ L MK + P + + + K A + + M ++P+L
Sbjct: 253 KGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCT 312
Query: 320 YNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIF 359
YN +I CN G + L+D M PD +TYN +
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLI 352
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 176/442 (39%), Gaps = 58/442 (13%)
Query: 68 SGIHPSDDCVREVLKL--SYNYPHSAVK-FFRWAGRLQKHSPHAWNLMVD-LLGKNELFD 123
G H S+D V+ + AV+ F+R S +N ++D LLG+N +
Sbjct: 105 QGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRI-Q 163
Query: 124 PMWDAIRSMKQEGV-LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLL 182
++ R MK++G + T+ ++ C + + A M N G D V+ +++
Sbjct: 164 MIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVI 223
Query: 183 SSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGW 242
SS+ CE E E + P + L+ G KE + A EMV + G
Sbjct: 224 SSM-CEVGLVKEGRELAE----RFEPVVSVYNALINGLCKEHDYKGAFELMREMVEK-GI 277
Query: 243 SKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVK----ENDA 298
S NV++Y + L + QIE FL M C P + Y L VK
Sbjct: 278 SP-NVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNI----YTLSSLVKGCFLRGTT 332
Query: 299 AHAIPLWDAMVAG-GIMPNLIMYNAMIGLQCNNGEV------------------------ 333
A+ LW+ M+ G G+ PN++ YN ++ C++G +
Sbjct: 333 FDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGS 392
Query: 334 -----------DNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE 382
D A + ++M+ G P+ + Y + + L R+ K +E ES M K
Sbjct: 393 LINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKEN 452
Query: 383 WPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLH-ESANALLIGICSLSRFSEV 441
P+ A I L D + A +++ M + H P + + N LL G+ +R E
Sbjct: 453 CAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEA 512
Query: 442 RRHAEDMLDRRIIIYESTMNKL 463
++ R + ST N L
Sbjct: 513 YGLTREIFMRGVEWSSSTYNTL 534
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 136/331 (41%), Gaps = 9/331 (2%)
Query: 166 MDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEG 224
M GI +V++ ++L++ + C Q A F + +K P+ + + L++G G
Sbjct: 272 MVEKGISPNVISYSTLIN-VLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRG 330
Query: 225 NAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKF 284
A + +M+ G + NV+AY+ + I + + M++ C P ++
Sbjct: 331 TTFDALDLWNQMIRGFGL-QPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 389
Query: 285 FTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMV 344
+ ++ F K A+ +W+ M+ G PN+++Y M+ C + + A L++ M
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 345 LHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEM-VKNEWPPTSSNCAAAIAMLFDCDDP 403
P T+N K L ++ E F +M ++ PP + L +
Sbjct: 450 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 509
Query: 404 EAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKL 463
E A+ + + V+ + N LL G C+ + M+ E TMN +
Sbjct: 510 EEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMI 569
Query: 464 KDAFYTEGRSRK-----DRFDSLFRRWKARV 489
A+ +G++ + D R+W+ V
Sbjct: 570 ILAYCKQGKAERAAQMLDLVSCGRRKWRPDV 600
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 119/301 (39%), Gaps = 23/301 (7%)
Query: 188 EENQTSTAMEFFEEVKG----KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWS 243
+E+ A+ FF+ + K P +F +++ +G + +M ++
Sbjct: 52 QESCVPLALHFFKSIANSNLFKHTPL--TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHC 109
Query: 244 KENVMAYDAFLLTLLRASQI---EEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAH 300
E D F+ + Q+ E + +K+ C P +K + + LD + EN
Sbjct: 110 SE-----DLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQM 164
Query: 301 AIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFK 360
++ M G PN+ YN ++ C N +VD A +LL EM G PD+++Y +
Sbjct: 165 IYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVIS 224
Query: 361 CLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKP 420
+ V+E + + P S A I L D + A E+ MVE + P
Sbjct: 225 SMCEVGLVKEGRE-----LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISP 279
Query: 421 LHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRKDRFDS 480
S + L+ +C+ + ML R T++ L + G + FD+
Sbjct: 280 NVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTT----FDA 335
Query: 481 L 481
L
Sbjct: 336 L 336
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 139/329 (42%), Gaps = 8/329 (2%)
Query: 149 SYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAP 208
+Y G +AI F + H + + +LL + + N T T F+ E+ P
Sbjct: 179 TYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMM-KLNPTGTIWGFYMEILDAGFP 237
Query: 209 -DGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVL 267
+ F IL+ + KEGN + A+ F E+ R + V++++ + + ++E
Sbjct: 238 LNVYVFNILMNKFCKEGNISDAQKVFDEITKR--SLQPTVVSFNTLINGYCKVGNLDEGF 295
Query: 268 RFLKVMKDHDCFPGLKFFTYALDVFVKEN--DAAHAIPLWDAMVAGGIMPNLIMYNAMIG 325
R M+ P + ++ ++ KEN D AH L+D M G++PN +++ +I
Sbjct: 296 RLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHG--LFDEMCKRGLIPNDVIFTTLIH 353
Query: 326 LQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPP 385
NGE+D +M+ G PD + YN + +N + + M++ P
Sbjct: 354 GHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 386 TSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHA 445
I D E A EI M +N ++ +AL+ G+C R + R
Sbjct: 414 DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL 473
Query: 446 EDMLDRRIIIYESTMNKLKDAFYTEGRSR 474
+ML I + T + DAF +G ++
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKGDAQ 502
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 133/342 (38%), Gaps = 10/342 (2%)
Query: 138 LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAME 197
L + F +C G ++A FD + ++ VV+ N+L++ C N
Sbjct: 238 LNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRL 297
Query: 198 FFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTL 257
+ K + PD +++ L+ KE A F EM K ++ D TL
Sbjct: 298 KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMC------KRGLIPNDVIFTTL 351
Query: 258 L----RASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGI 313
+ R +I+ + + M P + + ++ F K D A + D M+ G+
Sbjct: 352 IHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 411
Query: 314 MPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETES 373
P+ I Y +I C G+V+ A + EM +G D + ++ + + + +V + E
Sbjct: 412 RPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAER 471
Query: 374 FFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGIC 433
EM++ P + D + ++ M + P + N LL G+C
Sbjct: 472 ALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLC 531
Query: 434 SLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRK 475
L + + ML+ ++ + T N L + + S K
Sbjct: 532 KLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 111/250 (44%), Gaps = 20/250 (8%)
Query: 117 GKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVV 176
G + LFD M R + V+ F + + G + S+ M + G++ D+V
Sbjct: 328 GAHGLFDEMCK--RGLIPNDVI----FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIV 381
Query: 177 AVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEM 236
N+L++ C + + ++ + PD ++ L++G+ + G+ A EM
Sbjct: 382 LYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEM 441
Query: 237 ------VIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALD 290
+ RVG+S A + + + ++ + R L+ M P +T +D
Sbjct: 442 DQNGIELDRVGFS--------ALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMD 493
Query: 291 VFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFP 350
F K+ DA L M + G +P+++ YN ++ C G++ NA LLD M+ G P
Sbjct: 494 AFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVP 553
Query: 351 DSLTYNMIFK 360
D +TYN + +
Sbjct: 554 DDITYNTLLE 563
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 138/314 (43%), Gaps = 5/314 (1%)
Query: 86 NYPHSAVKFFRWAGRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLR-TFV 144
N+ + F+ + S ++ +++D L KN FD MK+ GV R T+
Sbjct: 388 NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 447
Query: 145 SAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-K 203
C G +EA++ + M GI+ D+V ++L++ C + + TA E + +
Sbjct: 448 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFC-KVGRFKTAKEIVCRIYR 506
Query: 204 GKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQI 263
++P+G ++ L+ + G +A + M++ G ++++ ++ + +L +A ++
Sbjct: 507 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE-GHTRDH-FTFNVLVTSLCKAGKV 564
Query: 264 EEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAM 323
E F++ M P F ++ + + A ++D M G P Y ++
Sbjct: 565 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 624
Query: 324 IGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEW 383
+ C G + A + L + A D++ YN + + ++ + + S F EMV+
Sbjct: 625 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 684
Query: 384 PPTSSNCAAAIAML 397
P S + I+ L
Sbjct: 685 LPDSYTYTSLISGL 698
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/311 (19%), Positives = 128/311 (41%), Gaps = 5/311 (1%)
Query: 145 SAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-- 202
+ + C +G +A+ F M I D SL+S +C + +T A+ F +E
Sbjct: 658 TLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC-RKGKTVIAILFAKEAEA 716
Query: 203 KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQ 262
+G + P+ + ++G K G KA F E + +G + + ++ +A + R +
Sbjct: 717 RGNVLPNKVMYTCFVDGMFKAGQW-KAGIYFREQMDNLGHTPD-IVTTNAMIDGYSRMGK 774
Query: 263 IEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNA 322
IE+ L M + + P L + L + K D + + L+ +++ GI+P+ + ++
Sbjct: 775 IEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHS 834
Query: 323 MIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE 382
++ C + ++ ++L + G D T+NM+ N ++ M
Sbjct: 835 LVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLG 894
Query: 383 WPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVR 442
C A +++L + + + M + + P L+ G+C +
Sbjct: 895 ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 954
Query: 443 RHAEDMLDRRI 453
E+M+ +I
Sbjct: 955 VVKEEMIAHKI 965
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/406 (18%), Positives = 149/406 (36%), Gaps = 54/406 (13%)
Query: 91 AVKFFRWA----GRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRS---MKQEGVLTLRTF 143
A+KF +W G H + +L + ++DP ++ M +
Sbjct: 93 ALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGAL 152
Query: 144 VSAFQ--------------SYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEE 189
++ ++ Y G +++ F +M +G V N++L S+
Sbjct: 153 MTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG 212
Query: 190 NQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKA--------KTTFGEMVIRVG 241
S E +K KI PD +F IL+ EG+ K+ K+ + ++
Sbjct: 213 EDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYN 272
Query: 242 -----WSKE--------------------NVMAYDAFLLTLLRASQIEEVLRFLKVMKDH 276
+ K+ +V Y+ + L R+++I + L+ M+
Sbjct: 273 TVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKR 332
Query: 277 DCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNA 336
P + ++ F E A L + M++ G+ PN + +NA+I + G A
Sbjct: 333 MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEA 392
Query: 337 FRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAM 396
++ M G P ++Y ++ L +N + F+ M +N I
Sbjct: 393 LKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDG 452
Query: 397 LFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVR 442
L + A + + M ++ + P + +AL+ G C + RF +
Sbjct: 453 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAK 498
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 97/238 (40%), Gaps = 6/238 (2%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
TF C G N A VM + GI D ++++S + + M E
Sbjct: 866 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 925
Query: 202 VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRAS 261
K I+P+ + L+ G + G+ A EM+ NV A A + L +
Sbjct: 926 SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH-KICPPNV-AESAMVRALAKCG 983
Query: 262 QIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYN 321
+ +E L+ M P + FT + + K + A+ L M G+ +L+ YN
Sbjct: 984 KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1043
Query: 322 AMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMV 379
+I C G++ AF L +EM G ++ TY K L+R RET A+++
Sbjct: 1044 VLITGLCAKGDMALAFELYEEMKGDGFLANATTY----KALIRGLLARETAFSGADII 1097
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 111/278 (39%), Gaps = 8/278 (2%)
Query: 213 FAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKV 272
+ IL+ + +EG + F M + G++ +V +A L +++++ + V FLK
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGL-YGFN-PSVYTCNAILGSVVKSGEDVSVWSFLKE 223
Query: 273 MKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGE 332
M P + F ++V E + L M G P ++ YN ++ C G
Sbjct: 224 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283
Query: 333 VDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAA 392
A LLD M G D TYNM+ L R+ ++ + +M K P
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 343
Query: 393 AIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRR 452
I + A ++ + M+ + P H + NAL+ G S F E + M +
Sbjct: 344 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 403
Query: 453 IIIYESTMNKLKDAFYTEGRSRKDRFDSLFRRWKARVK 490
+ E + L D G + FD L R + R+K
Sbjct: 404 LTPSEVSYGVLLD-----GLCKNAEFD-LARGFYMRMK 435
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 174/427 (40%), Gaps = 44/427 (10%)
Query: 45 VARTLCNLLTRTSPPEIETALTSSGIHPSDDCVREVLKL--SYNYPHSAVKFFRWAGRLQ 102
+ R C L E + G +P + +L L N +A F+ R++
Sbjct: 161 LVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRME 220
Query: 103 -KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAI 160
K + + +N+M+++L K + M+ G+ T+ T+ + Q + + GR A
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR 280
Query: 161 MSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGW 220
+ M + G + D+ N +LS + C E + S + +E+ + PD S+ IL+ G
Sbjct: 281 LIISEMKSKGFQPDMQTYNPILSWM-CNEGRASEVLREMKEI--GLVPDSVSYNILIRGC 337
Query: 221 EKEGNAAKAKTTFGEMV---IRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLK------ 271
G+ A EMV + + N + + F+ + A++I ++R ++
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEI--LIREIREKGIVL 395
Query: 272 ----------------------VMKDHDCFPGLK--FFTYALDVFV--KENDAAHAIPLW 305
+ D G++ FTY ++V ++N A L+
Sbjct: 396 DSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF 455
Query: 306 DAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRN 365
+ +V G+ P+L+M N ++ C G +D AF LL EM + PD +TYN + + L
Sbjct: 456 EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGE 515
Query: 366 KKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESA 425
K E EM + P + I+ D + A + M+ P +
Sbjct: 516 GKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTY 575
Query: 426 NALLIGI 432
NALL G+
Sbjct: 576 NALLKGL 582
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 111/275 (40%), Gaps = 40/275 (14%)
Query: 129 IRSMKQEG-VLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICC 187
IR ++++G VL T+ YC G +A D M GI+ SL+ + C
Sbjct: 385 IREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIY-VLC 443
Query: 188 EENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKEN 246
+N+T A E FE+V GK + PD L++G GN +A + EM + + + ++
Sbjct: 444 RKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDM-MSINPDD 502
Query: 247 VMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWD 306
V Y+ + L + EE + MK
Sbjct: 503 V-TYNCLMRGLCGEGKFEEARELMGEMKRR------------------------------ 531
Query: 307 AMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNK 366
GI P+ I YN +I G+ +AF + DEM+ G P LTYN + K L +N+
Sbjct: 532 -----GIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQ 586
Query: 367 KVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCD 401
+ E EM P S+ + I + + D
Sbjct: 587 EGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLD 621
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 139/363 (38%), Gaps = 42/363 (11%)
Query: 151 CVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-KGKIAPD 209
C +EAI F +M G N +L+ + N+ A F+ ++ + +I +
Sbjct: 166 CQLRMVDEAIECFYLMKEKGFYPKTETCNHILT-LLSRLNRIENAWVFYADMYRMEIKSN 224
Query: 210 GDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRF 269
+F I++ KEG KAK G ++ V K ++ Y+ + +IE
Sbjct: 225 VYTFNIMINVLCKEGKLKKAKGFLG--IMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLI 282
Query: 270 LKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCN 329
+ MK P ++ + L E A+ + M G++P+ + YN +I N
Sbjct: 283 ISEMKSKGFQPDMQTYNPILSWMCNEGRASEVL---REMKEIGLVPDSVSYNILIRGCSN 339
Query: 330 NGEVDNAFRLLDEMVLHGAFP-----------------------------------DSLT 354
NG+++ AF DEMV G P DS+T
Sbjct: 340 NGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVT 399
Query: 355 YNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMV 414
YN++ ++ ++ + EM+ + PT + I +L + A E++ +V
Sbjct: 400 YNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVV 459
Query: 415 ENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSR 474
+KP N L+ G C++ ++M I + T N L EG+
Sbjct: 460 GKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFE 519
Query: 475 KDR 477
+ R
Sbjct: 520 EAR 522
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 142/332 (42%), Gaps = 5/332 (1%)
Query: 107 HAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLR-TFVSAFQSYCVAGRFNEAIMSFDV 165
+ +NL++ L + D + M ++G TF + YC AG ++ + +
Sbjct: 148 YTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNA 207
Query: 166 MDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEG 224
M++ G+ + V N+++SS C E + + + E+++ + + PD +F + KEG
Sbjct: 208 MESFGVLPNKVIYNTIVSSFC-REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEG 266
Query: 225 NAAKAKTTFGEMVI--RVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGL 282
A F +M + +G + N + Y+ L + +E+ + ++++D L
Sbjct: 267 KVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASL 326
Query: 283 KFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDE 342
+ + L V+ A + M GI P++ YN ++ C G + +A ++
Sbjct: 327 QSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGL 386
Query: 343 MVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDD 402
M +G PD++TY + KV +S EM++N P + C + L+
Sbjct: 387 MKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGR 446
Query: 403 PEAAHEIWSYMVENHVKPLHESANALLIGICS 434
A E+ M E + N ++ G+C
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/386 (19%), Positives = 150/386 (38%), Gaps = 29/386 (7%)
Query: 105 SPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSF 163
S ++N+ + L ++ F ++ M +G+ ++ ++ C G ++A
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 164 DVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKE 223
+M +G+ D V LL C + E ++ P+ + ILL K
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 224 GNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDH------- 276
G ++A+ +M + G+ + V + + L + ++++ + +K M+ H
Sbjct: 445 GRISEAEELLRKMNEK-GYGLDTVTC-NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGN 502
Query: 277 ----------------DCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
+C P L ++ L+ K A A L+ M+ + P+ + Y
Sbjct: 503 LGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAY 562
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
N I C G++ +AFR+L +M G TYN + L ++ E EM +
Sbjct: 563 NIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKE 622
Query: 381 NEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRF-- 438
P AI L + + E A + M++ ++ P S L+ C + F
Sbjct: 623 KGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDM 682
Query: 439 -SEVRRHAEDMLDRRIIIYESTMNKL 463
EV A + ++ +Y N+L
Sbjct: 683 AQEVFETAVSICGQKEGLYSLMFNEL 708
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 125/303 (41%), Gaps = 11/303 (3%)
Query: 178 VNSLLS--SICCEENQTSTAMEFFEEVKGKIAPDGDS---FAILLEGWEKEGNAAKAKTT 232
++SLLS SI + N A F+ V+ + + S + +LLE KE
Sbjct: 75 LSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWL 134
Query: 233 FGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVF 292
+ +MV+ G + + ++ + L +S ++ M + C P F + +
Sbjct: 135 YKDMVL-CGIAPQ-TYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGY 192
Query: 293 VKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDS 352
K + L +AM + G++PN ++YN ++ C G D++ +++++M G PD
Sbjct: 193 CKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDI 252
Query: 353 LTYNMIFKCLVRNKKVRETESFFAEMVKNEW----PPTSSNCAAAIAMLFDCDDPEAAHE 408
+T+N L + KV + F++M +E+ P S + E A
Sbjct: 253 VTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKT 312
Query: 409 IWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFY 468
++ + EN +S N L G+ +F E + M D+ I + N L D
Sbjct: 313 LFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLC 372
Query: 469 TEG 471
G
Sbjct: 373 KLG 375
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 139/323 (43%), Gaps = 9/323 (2%)
Query: 129 IRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCE 188
++S + V+ T + C G N A+ + M+ G+ DVV N+LL+ +C
Sbjct: 168 VKSGYEPNVVVYNTLIDGL---CKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 189 ENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVM 248
+ A + +K I PD +F L++ + K+GN +A+ + EM I+ NV
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM-IQSSVDPNNV- 282
Query: 249 AYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAM 308
Y++ + L ++ + + +M CFP + + + F K + L+ M
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 309 VAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKV 368
G ++ YN +I C G++ A + MV PD +T+ ++ L N ++
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402
Query: 369 RETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANAL 428
F +M ++E I L D E A E++ + VKP + +
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462
Query: 429 LIGICSLSRFSEVRRHAEDMLDR 451
++G+C + RR A++++ R
Sbjct: 463 ILGLCK----NGPRREADELIRR 481
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 122/310 (39%), Gaps = 9/310 (2%)
Query: 140 LRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFF 199
L +F +C R + A+ M G E +V SLL C
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165
Query: 200 EEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLR 259
VK P+ + L++G K G A EM + G + V+ Y+ L L
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEME-KKGLGAD-VVTYNTLLTGLCY 223
Query: 260 ASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIM 319
+ + + R L+ M P + FT +DVFVK+ + A L+ M+ + PN +
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 320 YNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMV 379
YN++I C +G + +A + D M G FP+ +TYN + + + V E F M
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 380 KNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGIC------ 433
+ I A +I+ +MV V P + LL G+C
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403
Query: 434 -SLSRFSEVR 442
+L +F ++R
Sbjct: 404 SALVKFDDMR 413
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 113/276 (40%), Gaps = 14/276 (5%)
Query: 198 FFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENV-MAYDAFLLT 256
FFE V + P F LL A A E VI E +++D + T
Sbjct: 59 FFEMVHSQPLPSIVDFTRLL--------TATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 257 LL-----RASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAG 311
+L R S++ L L M P + F L F N A L MV
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 312 GIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRET 371
G PN+++YN +I C NGE++ A LL+EM G D +TYN + L + + +
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 372 ESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIG 431
+M+K P A I + + + A E++ M+++ V P + + N+++ G
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 432 ICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAF 467
+C R + ++ + M + T N L F
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 176/431 (40%), Gaps = 52/431 (12%)
Query: 45 VARTLCNLLTRTSPPEIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGRLQKH 104
+ R+LC ++ + S G+ P++ R + L ++ F A LQ
Sbjct: 109 LTRSLCKAGLHDLAGQMFECMKSDGVSPNN---RLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 105 SPHAWNLMVD-LLGKNELFDPMWDAIR----SMKQEGVLTLRTFVSAFQSYCVAGRFNEA 159
++V+ LL D + DA++ ++ + +TF + C G+ +A
Sbjct: 166 EVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKA 225
Query: 160 IMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK-GKI-APDGDSFAILL 217
+ VM G E D+V N+L+ C + N+ + A E F++VK G + +PD ++ ++
Sbjct: 226 LELLGVMSGFGCEPDIVTYNTLIQGFC-KSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 218 EGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHD 277
G+ K G +A + +M +R+G NV ++ + +A ++ M
Sbjct: 285 SGYCKAGKMREASSLLDDM-LRLGIYPTNV-TFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 278 CFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLI------------------- 318
CFP + FT +D + + + LW+ M A G+ PN
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 319 ----------------MYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCL 362
MYN +I C G+V+ A +++EM PD +T+ ++
Sbjct: 403 ELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGH 462
Query: 363 VRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAH---EIWSYMVENHVK 419
++ E S F +MV P ++ ++ L + A+ +I N+V
Sbjct: 463 CMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVV 522
Query: 420 PLH-ESANALL 429
PL ++ANA L
Sbjct: 523 PLETKTANATL 533
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 162/403 (40%), Gaps = 53/403 (13%)
Query: 79 EVLKLSYNYPHSAVKFFRWAGRLQ---KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQE 135
EV+K N PH +F+ ++ R + +HS +NL+ L K L D MK +
Sbjct: 74 EVVKKLDNNPHIGFRFWEFS-RFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSD 132
Query: 136 GV----LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQ 191
GV L VS+F G+ + A + ++ + +E + VNSLL+++ + ++
Sbjct: 133 GVSPNNRLLGFLVSSFAE---KGKLHFA--TALLLQSFEVEGCCMVVNSLLNTLV-KLDR 186
Query: 192 TSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAY 250
AM+ F+E ++ + D +F IL+ G G A KA
Sbjct: 187 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKA--------------------- 225
Query: 251 DAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVA 310
L L VM C P + + + F K N+ A ++ + +
Sbjct: 226 ----------------LELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS 269
Query: 311 GGIM-PNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVR 369
G + P+++ Y +MI C G++ A LLD+M+ G +P ++T+N++ + ++
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 370 ETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALL 429
E +M+ P + I +W M + P + + L+
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 430 IGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR 472
+C+ +R + R + + II N + D F G+
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 176/431 (40%), Gaps = 52/431 (12%)
Query: 45 VARTLCNLLTRTSPPEIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGRLQKH 104
+ R+LC ++ + S G+ P++ R + L ++ F A LQ
Sbjct: 109 LTRSLCKAGLHDLAGQMFECMKSDGVSPNN---RLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 105 SPHAWNLMVD-LLGKNELFDPMWDAIR----SMKQEGVLTLRTFVSAFQSYCVAGRFNEA 159
++V+ LL D + DA++ ++ + +TF + C G+ +A
Sbjct: 166 EVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKA 225
Query: 160 IMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK-GKI-APDGDSFAILL 217
+ VM G E D+V N+L+ C + N+ + A E F++VK G + +PD ++ ++
Sbjct: 226 LELLGVMSGFGCEPDIVTYNTLIQGFC-KSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 218 EGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHD 277
G+ K G +A + +M +R+G NV ++ + +A ++ M
Sbjct: 285 SGYCKAGKMREASSLLDDM-LRLGIYPTNV-TFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 278 CFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLI------------------- 318
CFP + FT +D + + + LW+ M A G+ PN
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 319 ----------------MYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCL 362
MYN +I C G+V+ A +++EM PD +T+ ++
Sbjct: 403 ELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGH 462
Query: 363 VRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAH---EIWSYMVENHVK 419
++ E S F +MV P ++ ++ L + A+ +I N+V
Sbjct: 463 CMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVV 522
Query: 420 PLH-ESANALL 429
PL ++ANA L
Sbjct: 523 PLETKTANATL 533
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 162/403 (40%), Gaps = 53/403 (13%)
Query: 79 EVLKLSYNYPHSAVKFFRWAGRLQ---KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQE 135
EV+K N PH +F+ ++ R + +HS +NL+ L K L D MK +
Sbjct: 74 EVVKKLDNNPHIGFRFWEFS-RFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSD 132
Query: 136 GV----LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQ 191
GV L VS+F G+ + A + ++ + +E + VNSLL+++ + ++
Sbjct: 133 GVSPNNRLLGFLVSSFAE---KGKLHFA--TALLLQSFEVEGCCMVVNSLLNTLV-KLDR 186
Query: 192 TSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAY 250
AM+ F+E ++ + D +F IL+ G G A KA
Sbjct: 187 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKA--------------------- 225
Query: 251 DAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVA 310
L L VM C P + + + F K N+ A ++ + +
Sbjct: 226 ----------------LELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS 269
Query: 311 GGIM-PNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVR 369
G + P+++ Y +MI C G++ A LLD+M+ G +P ++T+N++ + ++
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 370 ETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALL 429
E +M+ P + I +W M + P + + L+
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 430 IGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR 472
+C+ +R + R + + II N + D F G+
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 151/377 (40%), Gaps = 12/377 (3%)
Query: 42 VSPVARTLCNLLTRTSPPEIET----ALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRW 97
++P+ + L +L+ + S E E +L S + D ++ + A F+W
Sbjct: 87 LAPLEKGLIDLIRQVSELESEADAMASLEDSSFDLNHDSFYSLIWELRDEWRLAFLAFKW 146
Query: 98 AGRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFN 157
+ + +LM+ +LG ++ F+ W IR M T + Y A +
Sbjct: 147 GEKRGCDDQKSCDLMIWVLGNHQKFNIAWCLIRDMFNVSKDTRKAMFLMMDRYAAANDTS 206
Query: 158 EAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILL 217
+AI +FD+MD A LL ++ C A EF K D + F ++L
Sbjct: 207 QAIRTFDIMDKFKHTPYDEAFQGLLCAL-CRHGHIEKAEEFMLASKKLFPVDVEGFNVIL 265
Query: 218 EGW-EKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDH 276
GW + +AK + EM N +Y + + + + LR MK
Sbjct: 266 NGWCNIWTDVTEAKRIWREMGNYC--ITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKR 323
Query: 277 DCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNA 336
PG++ + + V +E+ A+ L + G+ P+ + YN+MI C G++D A
Sbjct: 324 GLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVA 383
Query: 337 FRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAM 396
+L M+ P T++ + + +T +M ++ PT +
Sbjct: 384 RNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPTEETFLLILGK 439
Query: 397 LFDCDDPEAAHEIWSYM 413
LF PE A +IW+ M
Sbjct: 440 LFKGKQPENALKIWAEM 456
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 149/366 (40%), Gaps = 41/366 (11%)
Query: 88 PHSAVKFFRWAGRLQ--KHSPHAWNLMVDLLGKNEL--------------FDPMWDAI-- 129
P +A+ F W R+ KH+ ++ +V LL E+ + + DA+
Sbjct: 40 PQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKITILMIKSCNSVRDALFV 99
Query: 130 ----RSMKQ------EGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVN 179
R+M++ + LT + + + S G E + M + D+ N
Sbjct: 100 VDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFN 159
Query: 180 SLLSSIC-----CEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFG 234
+L++ C E Q T + ++ PD ++ + G + A F
Sbjct: 160 TLVNGYCKLGYVVEAKQYVTWL-----IQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFK 214
Query: 235 EMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVK 294
EM N ++Y + L A +I+E L L MKD +C P ++ +T +D
Sbjct: 215 EMT--QNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCG 272
Query: 295 ENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLT 354
+ A+ L+ M GI P+ MY +I C+ +D A LL+ M+ +G P+ +T
Sbjct: 273 SGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVIT 332
Query: 355 YNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMV 414
YN + K + K V + ++M++ P IA + ++A+ + S M
Sbjct: 333 YNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLME 391
Query: 415 ENHVKP 420
E+ + P
Sbjct: 392 ESGLVP 397
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 5/214 (2%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
T+ S +C + A F M +G ++ V+ L+ + E + A+ +
Sbjct: 192 TYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLF-EAKKIDEALSLLVK 250
Query: 202 VKG-KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
+K P+ ++ +L++ G ++A F +M G ++ M Y + +
Sbjct: 251 MKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMS-ESGIKPDDCM-YTVLIQSFCSG 308
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
++E L+ M ++ P + + + F K+N A+ L M+ ++P+LI Y
Sbjct: 309 DTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITY 367
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLT 354
N +I QC++G +D+A+RLL M G P+ T
Sbjct: 368 NTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 82/219 (37%)
Query: 249 AYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAM 308
Y+ L +L R +EE+ R M + P + F ++ + K A +
Sbjct: 122 CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWL 181
Query: 309 VAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKV 368
+ G P+ Y + I C EVD AF++ EM +G + ++Y + L KK+
Sbjct: 182 IQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKI 241
Query: 369 RETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANAL 428
E S +M + P I L A ++ M E+ +KP L
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 429 LIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAF 467
+ CS E E ML+ ++ T N L F
Sbjct: 302 IQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGF 340
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 150/372 (40%), Gaps = 17/372 (4%)
Query: 109 WNLMVDLLGKN-------ELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIM 161
+N+++D L K +LFD M + + + +L T+ + YC AG ++
Sbjct: 217 YNVLIDGLCKGKRMNDAEQLFDEM------LARRLLPSLITYNTLIDGYCKAGNPEKSFK 270
Query: 162 SFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAILLEGW 220
+ M IE ++ N+LL + + A +E+K PD +F+IL +G+
Sbjct: 271 VRERMKADHIEPSLITFNTLLKGLF-KAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY 329
Query: 221 EKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFP 280
A A + E + G K N L L + +IE+ L P
Sbjct: 330 SSNEKAEAALGVY-ETAVDSGV-KMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVP 387
Query: 281 GLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLL 340
+ +D + ++ D A +AM G+ P+ + YN +I C GE++NA + +
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV 447
Query: 341 DEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDC 400
++M L G P TYN++ R + + EM N P + I L
Sbjct: 448 NKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKG 507
Query: 401 DDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTM 460
A + M + V P N L+ G CS + + R +++ML + I + T
Sbjct: 508 SKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTY 567
Query: 461 NKLKDAFYTEGR 472
N L D G+
Sbjct: 568 NTLIDGLSMTGK 579
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 129/291 (44%), Gaps = 13/291 (4%)
Query: 100 RLQKHSP--HAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRF 156
+L+ SP +N+++ G+ FD +D ++ M+ G + + ++ + C +
Sbjct: 451 KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKL 510
Query: 157 NEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAI 215
EA + M++ G+ V N L+ CC + + A F +E +K I + ++
Sbjct: 511 LEAQIVKRDMEDRGVSPKVRIYNMLIDG-CCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 216 LLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKD 275
L++G G ++A+ E + R G K +V Y++ + A ++ + + MK
Sbjct: 570 LIDGLSMTGKLSEAEDLLLE-ISRKGL-KPDVFTYNSLISGYGFAGNVQRCIALYEEMKR 627
Query: 276 HDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAG-GIMPNLIMYNAMIGLQCNNGEVD 334
P LK + + + KE I L + + + P+L++YN ++ +G+++
Sbjct: 628 SGIKPTLKTYHLLISLCTKE-----GIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDME 682
Query: 335 NAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPP 385
AF L +M+ D TYN + ++ K+ E S EM E P
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEP 733
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 116/292 (39%), Gaps = 38/292 (13%)
Query: 143 FVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV 202
+ + YC G A M + M+ G++ D +A N L+ C E E
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFC----------ELGE-- 439
Query: 203 KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQ 262
+E EKE N K K G S +V Y+ + R +
Sbjct: 440 --------------MENAEKEVNKMKLK----------GVSP-SVETYNILIGGYGRKYE 474
Query: 263 IEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNA 322
++ LK M+D+ P + + ++ K + A + M G+ P + +YN
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534
Query: 323 MIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE 382
+I C+ G++++AFR EM+ G + +TYN + L K+ E E E+ +
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594
Query: 383 WPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICS 434
P + I+ + + ++ M + +KP ++ + LLI +C+
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH-LLISLCT 645
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 72/185 (38%), Gaps = 2/185 (1%)
Query: 250 YDAFLLTLL--RASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDA 307
+ LL++L + I E +++ +P T LD VK I ++
Sbjct: 110 FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLN 169
Query: 308 MVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKK 367
++ P+ MY I +V L + M +P YN++ L + K+
Sbjct: 170 ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKR 229
Query: 368 VRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANA 427
+ + E F EM+ P+ I +PE + ++ M +H++P + N
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289
Query: 428 LLIGI 432
LL G+
Sbjct: 290 LLKGL 294
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 108/304 (35%), Gaps = 38/304 (12%)
Query: 181 LLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIR 239
LLS + E S A + F ++ + I P DS +LL+ K F + I
Sbjct: 114 LLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVF--LNIL 171
Query: 240 VGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAA 299
+ + Y + ++ S + + L MK +P + + +D K
Sbjct: 172 ESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMN 231
Query: 300 HAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEM--------------VL 345
A L+D M+A ++P+LI YN +I C G + +F++ + M +L
Sbjct: 232 DAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLL 291
Query: 346 HGAF---------------------PDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWP 384
G F PD+ T++++F N+K + V +
Sbjct: 292 KGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVK 351
Query: 385 PTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRH 444
+ C+ + L E A EI + + P N ++ G C R
Sbjct: 352 MNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMK 411
Query: 445 AEDM 448
E M
Sbjct: 412 IEAM 415
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%)
Query: 346 HGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEA 405
G +P S + ++ LV+ K+ R T + F ++++++ P+ AI D
Sbjct: 138 EGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGK 197
Query: 406 AHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKD 465
E+++ M + + P N L+ G+C R ++ + ++ML RR++ T N L D
Sbjct: 198 GLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLID 257
Query: 466 AFYTEGRSRK 475
+ G K
Sbjct: 258 GYCKAGNPEK 267
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 133/312 (42%), Gaps = 15/312 (4%)
Query: 170 GIEKDVVAVNSLLSSICCEENQTSTAMEFFE-EVKGKIAPDGDSFAILLEGWEKEGNAAK 228
G K VA ++ L C+ N+ A+ E V I PD ++ L+ K GN
Sbjct: 100 GGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGY 159
Query: 229 AKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYA 288
A +M G+ N + Y+A + L + + L+F++ + P +++
Sbjct: 160 AMQLVEKMEDH-GYPS-NTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFL 217
Query: 289 LDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGA 348
L+ KE A+ L D ++ G PNL+ YN ++ C G D+A L E+ G
Sbjct: 218 LEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGF 277
Query: 349 FPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHE 408
+ ++YN++ +CL + + E S AEM + P+ I L E A +
Sbjct: 278 KANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQ 337
Query: 409 IWSYMVE-NH-VKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMN----- 461
+ M + NH + S N ++ +C + V + ++M+ RR E T N
Sbjct: 338 VLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSL 397
Query: 462 -----KLKDAFY 468
K+++AFY
Sbjct: 398 CEHNSKVQEAFY 409
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 116/520 (22%), Positives = 197/520 (37%), Gaps = 100/520 (19%)
Query: 45 VARTLCNLLTRTSPPEIETALTSSGIHP-------SDDCVREVLKLSYNYPHSAVKFFRW 97
VAR L + SP + +T S P SDD + LS ++ H ++
Sbjct: 42 VARVLASTQITLSPKDSAFTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSH--LESLVT 99
Query: 98 AGRLQKHSP---HAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLT-LRTFVSAFQSYCVA 153
G H P H+ L+ DL N L + I M G++ + C
Sbjct: 100 GG----HKPNVAHSTQLLYDLCKANRLKKAIR-VIELMVSSGIIPDASAYTYLVNQLCKR 154
Query: 154 GRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDS 212
G A+ + M++HG + V N+L+ +C + +++F E + K +AP+ +
Sbjct: 155 GNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCM-LGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 213 FAILLEGWEKEGNAAKAKTTFGEMVIR-------------VGWSKE-------------- 245
++ LLE KE +A E++++ G+ KE
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELP 273
Query: 246 ------NVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAA 299
NV++Y+ L L + EE L M D P + + ++
Sbjct: 274 AKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTE 333
Query: 300 HAIPLWDAMVAGG--IMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNM 357
A+ + M G YN +I C G+VD + LDEM+ P+ TYN
Sbjct: 334 QALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA 393
Query: 358 IFKCLVRNKKVRE---------------TESFFAEMVKNEWPPTSSNCAAAIAMLFD--- 399
I N KV+E T F+ ++ + N AA +L++
Sbjct: 394 IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLC--RKGNTFAAFQLLYEMTR 451
Query: 400 CD-DPEA------------------AHEIWSYMVEN-HVKPLHESANALLIGICSLSRFS 439
C DP+A A E+ S M E+ + KP ++ NA+++G+C + R
Sbjct: 452 CGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTD 511
Query: 440 EVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRKDRFD 479
E M++++ + E+T A EG + +D +
Sbjct: 512 LAMEVFEMMVEKKRMPNETTY-----AILVEGIAHEDELE 546
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 127/322 (39%), Gaps = 2/322 (0%)
Query: 147 FQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKI 206
+C GR ++A+ F + G + +VV+ N LL +CC+ E G
Sbjct: 253 LTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDR 312
Query: 207 APDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEV 266
AP ++ IL+ G +A EM + +Y+ + L + +++ V
Sbjct: 313 APSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLV 372
Query: 267 LRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGL 326
++ L M C P + + + A + ++ Y ++I
Sbjct: 373 VKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITS 432
Query: 327 QCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE-WPP 385
C G AF+LL EM G PD+ TY+ + + L + M ++E P
Sbjct: 433 LCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKP 492
Query: 386 TSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHA 445
T N A I L + A E++ MVE P +E+ A+L+ + E+ +
Sbjct: 493 TVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMP-NETTYAILVEGIAHEDELELAKEV 551
Query: 446 EDMLDRRIIIYESTMNKLKDAF 467
D L R +I ++ ++++ F
Sbjct: 552 LDELRLRKVIGQNAVDRIVMQF 573
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 163/391 (41%), Gaps = 15/391 (3%)
Query: 37 LDTPNVSPVARTLCNLLTRTSPPEIETALTSSGIHPSDDCVREVL-----KLSYNYPHS- 90
L++ N S +R L L S ++ L + S VREVL LSY+
Sbjct: 70 LESANHSA-SRVLVTLQLDESGFNSKSVLDELNVRVSGLLVREVLVGILRNLSYDNKARC 128
Query: 91 ---AVKFFRWAGRLQ--KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGV-LTLRTFV 144
A +FF W+G + +H+ ++++L++ + + + MW + M Q+G T RTF
Sbjct: 129 AKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFN 188
Query: 145 SAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG 204
S AG +A++ F + N++L+S+ + + + ++
Sbjct: 189 LLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLED 248
Query: 205 KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIE 264
+PD ++ ILL + G + F EM R G+S ++ Y+ L L + ++
Sbjct: 249 GFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMA-RDGFSPDSY-TYNILLHILGKGNKPL 306
Query: 265 EVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMI 324
L L MK+ P + +T +D + + D MV G P+++ Y MI
Sbjct: 307 AALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMI 366
Query: 325 GLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWP 384
+GE+D A + EM + G P+ TYN + + L + RE EM
Sbjct: 367 TGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCN 426
Query: 385 PTSSNCAAAIAMLFDCDDPEAAHEIWSYMVE 415
P + ++ L A ++ MV+
Sbjct: 427 PNFVVYSTLVSYLRKAGKLSEARKVIREMVK 457
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 22/216 (10%)
Query: 116 LGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVA----GRFNE---AIMSFDVMDN 168
LGK + FD ++D M ++G F +Y + G+ N+ A+ + + M
Sbjct: 267 LGKMDRFDRLFD---EMARDG------FSPDSYTYNILLHILGKGNKPLAALTTLNHMKE 317
Query: 169 HGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAK 228
GI+ V+ +L+ + N + E VK PD + +++ G+ G K
Sbjct: 318 VGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDK 377
Query: 229 AKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYA 288
AK F EM ++ NV Y++ + L A + E LK M+ C P ++
Sbjct: 378 AKEMFREMTVK--GQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTL 435
Query: 289 LDVFVKENDAAHAIPLWDAMVAGG----IMPNLIMY 320
+ K + A + MV G ++P ++ Y
Sbjct: 436 VSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKY 471
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 127/294 (43%), Gaps = 8/294 (2%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
TF + C GR +A+ D M G + +N L C+ T +A+ +
Sbjct: 12 TFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGL-----CKMGDTESALNLLSK 66
Query: 202 VK-GKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
++ I + +++ K+G+ A+ F EM + + +V+ Y + + R+
Sbjct: 67 MEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFP--DVITYSGMIDSFCRS 124
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
+ + + L+ M + P + F+ ++ VKE + A ++ M+ GI P I Y
Sbjct: 125 GRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITY 184
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
N+MI C +++A R+LD M PD +T++ + + K+V F EM +
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 244
Query: 381 NEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICS 434
+ I D +AA ++ + M+ + V P + + ++L +CS
Sbjct: 245 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCS 298
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 107/232 (46%), Gaps = 2/232 (0%)
Query: 151 CVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDG 210
C G A F M + GI DV+ + ++ S C T + ++ +I PD
Sbjct: 87 CKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDV 146
Query: 211 DSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFL 270
+F+ L+ KEG ++A+ +G+M+ R + + Y++ + + ++ + R L
Sbjct: 147 VTFSALINALVKEGKVSEAEEIYGDMLRRGIFP--TTITYNSMIDGFCKQDRLNDAKRML 204
Query: 271 KVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNN 330
M C P + F+ ++ + K + + ++ M GI+ N + Y +I C
Sbjct: 205 DSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 264
Query: 331 GEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE 382
G++D A LL+ M+ G P+ +T+ + L K++R+ + ++ K+E
Sbjct: 265 GDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSE 316
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 102/264 (38%), Gaps = 6/264 (2%)
Query: 208 PDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVL 267
PD +F L+ G EG +A MV +E Y + L + E L
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMV------EEGHQPYGTIINGLCKMGDTESAL 61
Query: 268 RFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQ 327
L M++ + + +D K+ HA L+ M GI P++I Y+ MI
Sbjct: 62 NLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSF 121
Query: 328 CNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTS 387
C +G +A +LL +M+ PD +T++ + LV+ KV E E + +M++ PT+
Sbjct: 122 CRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT 181
Query: 388 SNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAED 447
+ I D A + M P + + L+ G C R +
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 241
Query: 448 MLDRRIIIYESTMNKLKDAFYTEG 471
M R I+ T L F G
Sbjct: 242 MHRRGIVANTVTYTTLIHGFCQVG 265
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 75/200 (37%), Gaps = 4/200 (2%)
Query: 273 MKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGE 332
M + C P + FT ++ E A+ L D MV G P Y +I C G+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 333 VDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAA 392
++A LL +M + YN I L ++ ++ F EM P +
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 393 AIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRR 452
I A ++ M+E + P + +AL+ + + SE DML R
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 453 IIIYESTMNKLKDAFYTEGR 472
I T N + D F + R
Sbjct: 177 IFPTTITYNSMIDGFCKQDR 196
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 125/299 (41%), Gaps = 7/299 (2%)
Query: 139 TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEF 198
++ T S +C R +EA+ D M G + D V +L+ + + N+ S A+
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF-QHNKASEAVAL 202
Query: 199 FEE--VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLT 256
E VKG PD ++ ++ G K G A +M G + +V+ Y+ +
Sbjct: 203 VERMVVKG-CQPDLVTYGAVINGLCKRGEPDLALNLLNKM--EKGKIEADVVIYNTIIDG 259
Query: 257 LLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPN 316
L + +++ M+ P + + + + A L M+ I P+
Sbjct: 260 LCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPD 319
Query: 317 LIMYNAMIGLQCNNGEVDNAFRLLDEMVLHG-AFPDSLTYNMIFKCLVRNKKVRETESFF 375
L+ +NA+I G++ A +L DEMV FPD + YN + K + K+V E F
Sbjct: 320 LVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVF 379
Query: 376 AEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICS 434
EM + + I F D + A ++ MV + V P + N LL G+C+
Sbjct: 380 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCN 438
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 138/323 (42%), Gaps = 24/323 (7%)
Query: 73 SDDC-------VREVLKLSYNYPHSAVKFFRWAGRLQKHSPH----AWNLMVDLLGKNEL 121
SDDC V + LKL A+ F G + K P ++ ++ + K
Sbjct: 39 SDDCRENLSRKVLQDLKLD-----DAIGLF---GDMVKSRPFPSIVEFSKLLSAIAKMNK 90
Query: 122 FDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNS 180
FD + M+ G+ L T+ +C + + A+ M G +V +NS
Sbjct: 91 FDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNS 150
Query: 181 LLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIR 239
LL+ C N+ S A+ ++ V+ PD +F L+ G + A++A MV++
Sbjct: 151 LLNGFC-HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 209
Query: 240 VGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAA 299
+ +++ Y A + L + + + L L M+ + + +D K
Sbjct: 210 --GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMD 267
Query: 300 HAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIF 359
A L++ M GI P++ YN +I CN G +A RLL +M+ PD + +N +
Sbjct: 268 DAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALI 327
Query: 360 KCLVRNKKVRETESFFAEMVKNE 382
V+ K+ E E + EMVK++
Sbjct: 328 DAFVKEGKLVEAEKLYDEMVKSK 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 119/279 (42%), Gaps = 1/279 (0%)
Query: 151 CVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDG 210
C ++A F+ M+ GI+ DV N L+S +C + + + ++ I PD
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDL 320
Query: 211 DSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFL 270
F L++ + KEG +A+ + EMV + +V+AY+ + + ++EE +
Sbjct: 321 VFFNALIDAFVKEGKLVEAEKLYDEMV-KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVF 379
Query: 271 KVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNN 330
+ M +T + F + D +A ++ MV+ G+ P+++ YN ++ CNN
Sbjct: 380 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNN 439
Query: 331 GEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNC 390
G V+ A + + M D +TY + + L + KV + F + P
Sbjct: 440 GNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTY 499
Query: 391 AAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALL 429
++ E A ++ M E+ P + N L+
Sbjct: 500 TTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 129/316 (40%), Gaps = 5/316 (1%)
Query: 155 RFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-KGKIAPDGDSF 213
+F+ I + M N GI ++ S+ + C +Q S A+ ++ K P +
Sbjct: 90 KFDLVISLGEQMQNLGISHNLYTY-SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTL 148
Query: 214 AILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVM 273
LL G+ GN + ++ +G+ + V + + L + ++ E + ++ M
Sbjct: 149 NSLLNGF-CHGNRISEAVALVDQMVEMGYQPDTV-TFTTLVHGLFQHNKASEAVALVERM 206
Query: 274 KDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEV 333
C P L + ++ K + A+ L + M G I ++++YN +I C +
Sbjct: 207 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHM 266
Query: 334 DNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAA 393
D+AF L ++M G PD TYN + CL + + ++M++ P A
Sbjct: 267 DDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326
Query: 394 IAMLFDCDDPEAAHEIWSYMVEN-HVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRR 452
I A +++ MV++ H P + N L+ G C R E +M R
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386
Query: 453 IIIYESTMNKLKDAFY 468
++ T L F+
Sbjct: 387 LVGNTVTYTTLIHGFF 402
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 117/280 (41%), Gaps = 5/280 (1%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
TF + + +EA+ + M G + D+V ++++ +C + + A+ +
Sbjct: 182 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC-KRGEPDLALNLLNK 240
Query: 202 V-KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
+ KGKI D + +++G K + A F +M + K +V Y+ + L
Sbjct: 241 MEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK--GIKPDVFTYNPLISCLCNY 298
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGG-IMPNLIM 319
+ + R L M + + P L FF +D FVKE A L+D MV P+++
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 320 YNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMV 379
YN +I C V+ + EM G +++TY + + + + F +MV
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 380 KNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVK 419
+ P + L + + E A ++ YM + +K
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMK 458
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 4/227 (1%)
Query: 174 DVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTT 232
DVVA N+L+ C + + ME F E+ + + + ++ L+ G+ + + A+
Sbjct: 355 DVVAYNTLIKGFC-KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 233 FGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVF 292
F +MV ++M Y+ L L +E L + M+ D + +T ++
Sbjct: 414 FKQMV--SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEAL 471
Query: 293 VKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDS 352
K L+ ++ G+ PN++ Y M+ C G + A L EM G P+S
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNS 531
Query: 353 LTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFD 399
TYN + + +R+ + EM + +S ML D
Sbjct: 532 GTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHD 578
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 113/275 (41%), Gaps = 37/275 (13%)
Query: 233 FGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVF 292
FG+MV + +++ + L + + ++ + V+ + M++ L ++ ++ F
Sbjct: 63 FGDMVKSRPFP--SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYF 120
Query: 293 VKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDS 352
+ + + A+ + M+ G P+++ N+++ C+ + A L+D+MV G PD+
Sbjct: 121 CRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 180
Query: 353 LTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEA------- 405
+T+ + L ++ K E + MV P A I L +P+
Sbjct: 181 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 240
Query: 406 ----------------------------AHEIWSYMVENHVKPLHESANALLIGICSLSR 437
A ++++ M +KP + N L+ +C+ R
Sbjct: 241 MEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGR 300
Query: 438 FSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR 472
+S+ R DML++ I N L DAF EG+
Sbjct: 301 WSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 149/359 (41%), Gaps = 42/359 (11%)
Query: 91 AVKFFRWAGRLQ---KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEG---VLTLRTFV 144
A++ F +AG+ H+ ++ ++ L + FDP+ + ++ F+
Sbjct: 65 ALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFI 124
Query: 145 SAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG 204
++Y +AGR+ ++ F + + G+++ V ++N+LL+ + +NQ F+ V
Sbjct: 125 DLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLI--QNQR------FDLVHA 176
Query: 205 KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIE 264
+SF I N+ + + L + + IE
Sbjct: 177 MFKNSKESFGI----------------------------TPNIFTCNLLVKALCKKNDIE 208
Query: 265 EVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMI 324
+ L + P L +T L +V D A + + M+ G P+ Y ++
Sbjct: 209 SAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLM 268
Query: 325 GLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWP 384
C G A ++D+M + P+ +TY ++ + L + KK E + F EM++ +
Sbjct: 269 DGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFM 328
Query: 385 PTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRR 443
P SS C I L + + A +W M++N+ P + + L+ +C R +E R+
Sbjct: 329 PDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARK 387
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 127/310 (40%), Gaps = 8/310 (2%)
Query: 110 NLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMDN 168
NL+V L K + + + + G++ L T+ + Y G A + M +
Sbjct: 195 NLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLD 254
Query: 169 HGIEKDVVAVNSLLSSIC--CEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNA 226
G D L+ C ++ +T M+ E K +I P+ ++ +++ KE +
Sbjct: 255 RGWYPDATTYTVLMDGYCKLGRFSEAATVMDDME--KNEIEPNEVTYGVMIRALCKEKKS 312
Query: 227 AKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFT 286
+A+ F EM+ R ++ + L +++E + M ++C P +
Sbjct: 313 GEARNMFDEMLERSFMPDSSLCC--KVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLS 370
Query: 287 YALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLH 346
+ KE A L+D G I P+L+ YN +I C GE+ A RL D+M
Sbjct: 371 TLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDMYER 429
Query: 347 GAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAA 406
P++ TYN++ + L +N V+E EM++ P + L E A
Sbjct: 430 KCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDA 489
Query: 407 HEIWSYMVEN 416
+I S V N
Sbjct: 490 MKIVSMAVMN 499
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 3/264 (1%)
Query: 132 MKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEEN 190
MK+ GVL L T+ + YC G +A + + + +VV +L+ C
Sbjct: 260 MKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 319
Query: 191 QTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAY 250
+ F VK + P+ + L+ G K GN +A EM + S + V Y
Sbjct: 320 LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME-SLNLSPD-VFTY 377
Query: 251 DAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVA 310
+ L Q+ E R + MK+ FP + + + KE + A+ L M A
Sbjct: 378 TILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTA 437
Query: 311 GGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRE 370
G+ PN+I ++ +I CN ++ A L EM + G PD +TY + + ++E
Sbjct: 438 SGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKE 497
Query: 371 TESFFAEMVKNEWPPTSSNCAAAI 394
+++M++ P A +
Sbjct: 498 ALRLYSDMLEAGIHPNDHTFACLV 521
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 153/383 (39%), Gaps = 42/383 (10%)
Query: 97 WAGRLQKHSPHAWNLMVDLLG--KNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVA 153
W R K SP + + L G + FD +W + M G++ + + FQ
Sbjct: 153 WVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQ 212
Query: 154 GRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDS 212
G +++ D M + GI+ +V + +C +N+ A + FE +K + P+ +
Sbjct: 213 GLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLC-RDNKMEEAEKMFELMKKHGVLPNLYT 271
Query: 213 FAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKV 272
++ +++G+ K GN +A G KE ++A
Sbjct: 272 YSAMIDGYCKTGNVRQA----------YGLYKEILVA----------------------- 298
Query: 273 MKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGE 332
+ P + F +D F K + A L+ MV G+ PNL +YN +I C +G
Sbjct: 299 ----ELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGN 354
Query: 333 VDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAA 392
+ A LL EM PD TY ++ L +V E F +M P+S+ +
Sbjct: 355 MLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNS 414
Query: 393 AIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRR 452
I + E A ++ S M + V+P + + L+ G C++ +M +
Sbjct: 415 LIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKG 474
Query: 453 IIIYESTMNKLKDAFYTEGRSRK 475
I+ T L DA + E ++
Sbjct: 475 IVPDVVTYTALIDAHFKEANMKE 497
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 95/244 (38%), Gaps = 2/244 (0%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
T+ C+ + EA F M N I NSL+ C E N E
Sbjct: 376 TYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEM 435
Query: 202 VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRAS 261
+ P+ +F+ L++G+ + A + EM I+ +V+ Y A + + +
Sbjct: 436 TASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIK--GIVPDVVTYTALIDAHFKEA 493
Query: 262 QIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYN 321
++E LR M + P F +D F KE + AI + N + +
Sbjct: 494 NMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFT 553
Query: 322 AMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKN 381
+I C NG + A R +M G PD +Y + K ++ K++ +T +M+K
Sbjct: 554 CLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKT 613
Query: 382 EWPP 385
P
Sbjct: 614 GILP 617
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 92/234 (39%), Gaps = 5/234 (2%)
Query: 105 SPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSF 163
S +N ++ K + D M GV + TF + YC A+ +
Sbjct: 408 SSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLY 467
Query: 164 DVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKE 223
M GI DVV +L+ + E N + + ++ I P+ +FA L++G+ KE
Sbjct: 468 FEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKE 527
Query: 224 GNAAKAKTTFGEM-VIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGL 282
G + A + E R W N + + + L + I RF M+ P +
Sbjct: 528 GRLSVAIDFYQENNQQRSCW---NHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDI 584
Query: 283 KFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNA 336
+ L ++E + L M+ GI+PNL++ + NG V +A
Sbjct: 585 CSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 140/358 (39%), Gaps = 44/358 (12%)
Query: 103 KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVA-GRFNEAIM 161
K + +N +++ K F + ++ MK++GV+ + + V G+ ++A
Sbjct: 256 KPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEK 315
Query: 162 SFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWE 221
FD M GIE DV SL+S C + N + F E + ++P ++ L++G
Sbjct: 316 LFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVC 375
Query: 222 KEGNAAKAKTTFGEM------------------VIRVGWSKENVMAYD-----AFLLTLL 258
K G A+ EM R G E M YD F +
Sbjct: 376 KVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVF 435
Query: 259 RASQIEEVLRFLKVMKDHDCF------PGLKF----FTYALDVFVKENDAAHAIPLWDAM 308
+ I LK + + G+K +T +DV+ KE + A L+ M
Sbjct: 436 TCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEM 495
Query: 309 VAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIF--KCLVRNK 366
+ G+ PN I YN MI C G++ A +L M +G PDS TY + +C+ N
Sbjct: 496 SSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADN- 554
Query: 367 KVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIW------SYMVENHV 418
V E F+EM S I+ L + A ++ Y ++N V
Sbjct: 555 -VDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKV 611
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 129/332 (38%), Gaps = 14/332 (4%)
Query: 146 AFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKG 204
F+ Y G F E + FD M G+ D + L + + + +E F V
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVA-AKKRRRIDLCLEIFRRMVDS 218
Query: 205 KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIE 264
+ S I++EG + G K+K E ++ K Y+ + ++
Sbjct: 219 GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVK--GIKPEAYTYNTIINAYVKQRDFS 276
Query: 265 EVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMI 324
V LKVMK +T +++ VK + A L+D M GI ++ +Y ++I
Sbjct: 277 GVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLI 336
Query: 325 GLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWP 384
C G + AF L DE+ G P S TY + + KV E + AE++ NE
Sbjct: 337 SWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVC---KVGEMGA--AEILMNEMQ 391
Query: 385 PTSSNCAAAI-AMLFD--CDDP--EAAHEIWSYMVENHVKPLHESANALLIGICSLSRFS 439
N + L D C + A I+ M + + + N + L R+
Sbjct: 392 SKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYD 451
Query: 440 EVRRHAEDMLDRRIIIYESTMNKLKDAFYTEG 471
E ++ M++ + + + L D + EG
Sbjct: 452 EAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEG 483
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 129/284 (45%), Gaps = 5/284 (1%)
Query: 107 HAWNLMVDLLGKNELFDPMWDAIRSMKQEGV-LTLRTFVSAFQSYCVAGRFNEAIMSFDV 165
+ +N +++ L K+ + M++ GV + T+ + C + NEA D
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ 328
Query: 166 MDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEG 224
M + GI +++ N+L+ C + A+ ++K + ++P ++ IL+ G+ ++G
Sbjct: 329 MKSDGINPNLITYNTLIDGFC-GVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Query: 225 NAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKF 284
+ + A EM R K + + Y + T R+ +E+ ++ M++ P +
Sbjct: 388 DTSGAAKMVKEMEER--GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHT 445
Query: 285 FTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMV 344
++ + F + A L+ +MV PN ++YN MI C G A +LL EM
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEME 505
Query: 345 LHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSS 388
P+ +Y + + L + +K +E E +M+ + P++S
Sbjct: 506 EKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTS 549
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 150/373 (40%), Gaps = 10/373 (2%)
Query: 107 HAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVM 166
+ +N ++ + + F+ W K + VL + +F + C AG + SFD++
Sbjct: 130 NCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEK---SFDLL 186
Query: 167 ---DNHGIEKDVVAVNSLLSSICCEENQTSTAME-FFEEVKGKIAPDGDSFAILLEGWEK 222
G +VV +L+ CC++ + A + FFE K + + ++ +L+ G K
Sbjct: 187 IELTEFGFSPNVVIYTTLIDG-CCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245
Query: 223 EGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGL 282
G + + +M + N+ Y+ + L + + ++ + M++ +
Sbjct: 246 NGVKKQGFEMYEKM--QEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNI 303
Query: 283 KFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDE 342
+ + +E A + D M + GI PNLI YN +I C G++ A L +
Sbjct: 304 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD 363
Query: 343 MVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDD 402
+ G P +TYN++ R EM + P+ I D+
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 423
Query: 403 PEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNK 462
E A ++ M E + P + + L+ G C + +E R + M+++ E N
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 463 LKDAFYTEGRSRK 475
+ + EG S +
Sbjct: 484 MILGYCKEGSSYR 496
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 111/259 (42%), Gaps = 17/259 (6%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGV-LTLRTFVSAFQSYCVAGRFNEAIMSFDVM 166
+N ++ L + + + MK +G+ L T+ + +C G+ +A+ +
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGN 225
+ G+ +V N L+S C + TS A + +E++ + I P ++ IL++ + + N
Sbjct: 365 KSRGLSPSLVTYNILVSGFC-RKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 423
Query: 226 AAKAKTTFGEMVIRVGWSKE------NVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCF 279
KA I++ S E +V Y + Q+ E R K M + +C
Sbjct: 424 MEKA--------IQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE 475
Query: 280 PGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRL 339
P + + + KE + A+ L M + PN+ Y MI + C + A RL
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERL 535
Query: 340 LDEMVLHGAFPDSLTYNMI 358
+++M+ G P + ++I
Sbjct: 536 VEKMIDSGIDPSTSILSLI 554
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 113/259 (43%), Gaps = 3/259 (1%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVM 166
++N ++D K D A M G+ + T+ S C R ++A+ D M
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNA 226
N G++ D+ A +L+ C N S + F E ++ + P + L+ G+ GN
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 227 AKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFT 286
A + +M ++ G + ++ Y + LL+ + M+ P +T
Sbjct: 706 VAALDLYKKM-LKDGL-RCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYT 763
Query: 287 YALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLH 346
++ K+ + +++ M + PN+++YNA+I G +D AFRL DEM+
Sbjct: 764 VIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDK 823
Query: 347 GAFPDSLTYNMIFKCLVRN 365
G PD T++++ V N
Sbjct: 824 GILPDGATFDILVSGQVGN 842
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 93/438 (21%), Positives = 183/438 (41%), Gaps = 51/438 (11%)
Query: 45 VARTLCNLLTR---TSPPEIETALTSSGIHPSDDCVREVL---KLSYNYPHSAVKFF-RW 97
V RTL L+ R T E+ + + + G+ D+ ++L L P A++ R
Sbjct: 201 VNRTLSALVQRNSLTEAKELYSRMVAIGVD-GDNVTTQLLMRASLREEKPAEALEVLSRA 259
Query: 98 AGRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEG--VLTLRTFVSAFQSYCVAGR 155
R + ++L V K +R MK++ V + T+ S + G
Sbjct: 260 IERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGN 319
Query: 156 FNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-KGKIAPDGDSFA 214
++AI D M + GI +VVA SL++ C+ N +A+ F+++ K +P+ +F+
Sbjct: 320 MDDAIRLKDEMLSDGISMNVVAATSLITG-HCKNNDLVSALVLFDKMEKEGPSPNSVTFS 378
Query: 215 ILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMK 274
+L+E + K G ++E+ L F K M+
Sbjct: 379 VLIEWFRKNG-------------------------------------EMEKALEFYKKME 401
Query: 275 DHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVD 334
P + + ++K A+ L+D G + N+ + N ++ C G+ D
Sbjct: 402 VLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-LANVFVCNTILSWLCKQGKTD 460
Query: 335 NAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAI 394
A LL +M G P+ ++YN + R K + F+ +++ P + + I
Sbjct: 461 EATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILI 520
Query: 395 AMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDML-DRRI 453
F D + A E+ ++M ++++ ++ G+C + + S+ R +M+ ++R+
Sbjct: 521 DGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRL 580
Query: 454 IIYESTMNKLKDAFYTEG 471
+ + N + D F+ EG
Sbjct: 581 CVSCMSYNSIIDGFFKEG 598
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 120/274 (43%), Gaps = 11/274 (4%)
Query: 151 CVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDG 210
C G+ +EA M++ GI +VV+ N+++ C ++N + F ++ + P+
Sbjct: 454 CKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNN 513
Query: 211 DSFAILLEGW---EKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVL 267
+++IL++G E NA + I V N + Y + L + Q +
Sbjct: 514 YTYSILIDGCFRNHDEQNALEVVNHMTSSNIEV-----NGVVYQTIINGLCKVGQTSKAR 568
Query: 268 RFLKVMKDHD--CFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIG 325
L M + C + + + +D F KE + A+ ++ M GI PN+I Y +++
Sbjct: 569 ELLANMIEEKRLCVSCMSYNSI-IDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMN 627
Query: 326 LQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPP 385
C N +D A + DEM G D Y + + + + F+E+++ P
Sbjct: 628 GLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNP 687
Query: 386 TSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVK 419
+ + I+ + + AA +++ M+++ ++
Sbjct: 688 SQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLR 721
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 164/384 (42%), Gaps = 48/384 (12%)
Query: 31 NEFPTHLDTPNVSPVARTLC-NLLTRTSPPEIETALTSSGIHPSDDC-VREVLKLSYNYP 88
++FP + P S R L + +P + +L S+ DD V +VL N P
Sbjct: 29 SQFPKESENP--SQEQRLLVYGSTSEENPVTSKVSLLSAKPEQKDDASVIDVLLNRRNNP 86
Query: 89 HSAVKFFRWA----GRLQK------------HSPHAWNLMVDLLGK-----------NEL 121
+A++F+ WA G + SP + DLL + + L
Sbjct: 87 EAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLIRYVSTSNPTPMASVL 146
Query: 122 FDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVA---- 177
+ D+ +S E + R F +Y + + A+ D++ N +E DV+
Sbjct: 147 VSKLVDSAKSFGFE--VNSRAFNYLLNAYSKDRQTDHAV---DIV-NQMLELDVIPFFPY 200
Query: 178 VNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFA--ILLEGWEKEGNAAKAKTTFGE 235
VN LS++ + N + A E + + I DGD+ +L+ +E A+A
Sbjct: 201 VNRTLSALV-QRNSLTEAKELYSRMVA-IGVDGDNVTTQLLMRASLREEKPAEALEVLSR 258
Query: 236 MVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHD-CFPGLKFFTYALDVFVK 294
+ R ++ + + Y + + + L+ MK+ C P + +T + VK
Sbjct: 259 AIER--GAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVK 316
Query: 295 ENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLT 354
+ + AI L D M++ GI N++ ++I C N ++ +A L D+M G P+S+T
Sbjct: 317 QGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVT 376
Query: 355 YNMIFKCLVRNKKVRETESFFAEM 378
++++ + +N ++ + F+ +M
Sbjct: 377 FSVLIEWFRKNGEMEKALEFYKKM 400
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 126/291 (43%), Gaps = 5/291 (1%)
Query: 166 MDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV--KGKIAPDGDSFAILLEGWEKE 223
M + IE + V ++++ +C + QTS A E + + ++ S+ +++G+ KE
Sbjct: 539 MTSSNIEVNGVVYQTIINGLC-KVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKE 597
Query: 224 GNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLK 283
G A + EM G S NV+ Y + + L + +++++ L MK+ +
Sbjct: 598 GEMDSAVAAYEEMCGN-GISP-NVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIP 655
Query: 284 FFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEM 343
+ +D F K ++ A L+ ++ G+ P+ +YN++I N G + A L +M
Sbjct: 656 AYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM 715
Query: 344 VLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDP 403
+ G D TY + L+++ + + EM P + L
Sbjct: 716 LKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQF 775
Query: 404 EAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRII 454
+++ M +N+V P NA++ G E R ++MLD+ I+
Sbjct: 776 VKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGIL 826
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 129/337 (38%), Gaps = 38/337 (11%)
Query: 151 CVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPD 209
C G N AI F M + G + +++ SL+ +C ++ A E EE V+ P+
Sbjct: 263 CENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLC-KKGSIKQAFEMLEEMVRNGWKPN 321
Query: 210 GDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRF 269
+ L++G K G KA F ++V R K NV Y + + + ++
Sbjct: 322 VYTHTALIDGLCKRGWTEKAFRLFLKLV-RSDTYKPNVHTYTSMIGGYCKEDKLNRAEML 380
Query: 270 LKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCN 329
MK+ FP + +T ++ K A L + M G MPN+ YNA I C
Sbjct: 381 FSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCK 440
Query: 330 NGEVDNAFRLLDEMVLHGAFPDSLTY---------------------------------- 355
A+ LL++ G D +TY
Sbjct: 441 KSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRL 500
Query: 356 -NMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMV 414
N++ R KK++E+E F +V PT + I+ D + A + + M
Sbjct: 501 NNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMK 560
Query: 415 ENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDR 451
+ P + +L+ G+C S E + E M+DR
Sbjct: 561 RHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDR 597
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 139/355 (39%), Gaps = 23/355 (6%)
Query: 91 AVKFFRWAGRLQK--HSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQ 148
A+ FF WA +K H + + D L N + +R M LR F
Sbjct: 110 ALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCM-------LRNFSEI-- 160
Query: 149 SYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE--VKGKI 206
GR NEA+ M N G+ + +N +L I E A F+E V+G +
Sbjct: 161 -----GRLNEAVGMVMDMQNQGLTPSSITMNCVL-EIAVELGLIEYAENVFDEMSVRG-V 213
Query: 207 APDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEV 266
PD S+ +++ G ++G +A M+ R G+ +N L L +
Sbjct: 214 VPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQR-GFIPDNATC-TLILTALCENGLVNRA 271
Query: 267 LRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGL 326
+ + + M D P L FT +D K+ A + + MV G PN+ + A+I
Sbjct: 272 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 331
Query: 327 QCNNGEVDNAFRLLDEMVLHGAF-PDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPP 385
C G + AFRL ++V + P+ TY + + K+ E F+ M + P
Sbjct: 332 LCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFP 391
Query: 386 TSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSE 440
+ I A+E+ + M + P + NA + +C SR E
Sbjct: 392 NVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPE 446
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/303 (19%), Positives = 114/303 (37%), Gaps = 42/303 (13%)
Query: 87 YPHSAVKFFRWAGRLQKHSP--HAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTF 143
+ A + F R + P H + M+ K + + MK++G+ + T+
Sbjct: 337 WTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTY 396
Query: 144 VSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV- 202
+ +C AG F A ++M + G ++ N+ + S+C ++++ A E +
Sbjct: 397 TTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLC-KKSRAPEAYELLNKAF 455
Query: 203 KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQ 262
+ DG ++ IL++ K+ + +A F M N ++A
Sbjct: 456 SCGLEADGVTYTILIQEQCKQNDINQALAFFCRM---------NKTGFEA---------- 496
Query: 263 IEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNA 322
++ + F ++ + L+ +V+ G++P Y +
Sbjct: 497 ------------------DMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTS 538
Query: 323 MIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE 382
MI C G++D A + M HG PDS TY + L + V E + M+
Sbjct: 539 MISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRG 598
Query: 383 WPP 385
P
Sbjct: 599 LSP 601
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 138/319 (43%), Gaps = 9/319 (2%)
Query: 109 WNLMVDLLGKNEL-FDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMD 167
+ ++VD L K L M +++ + Q L + F S +C RF+EA+ F +M
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 168 NHGIEKDVVAVN-----SLLSSICCEENQTSTAMEFFEEV-KGKIAPDGDSFAILLEGWE 221
+GI+ DV S++ C+ + + ++ F+ + + KI+ D +++
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLF 583
Query: 222 KEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPG 281
K A F ++ G + +++ Y+ + +++E R +++K P
Sbjct: 584 KCHRIEDASKFFNNLI--EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 641
Query: 282 LKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLD 341
T + V K ND AI ++ M G PN + Y ++ + +++ +F+L +
Sbjct: 642 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 701
Query: 342 EMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCD 401
EM G P ++Y++I L + +V E + F + + + P A I
Sbjct: 702 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 761
Query: 402 DPEAAHEIWSYMVENHVKP 420
A ++ +M+ N VKP
Sbjct: 762 RLVEAALLYEHMLRNGVKP 780
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/346 (19%), Positives = 141/346 (40%), Gaps = 43/346 (12%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSS----------------- 184
TF + +C G + A F VM+ GIE D++A ++L+
Sbjct: 288 TFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 347
Query: 185 -----------------ICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNA 226
+ + +TA ++ + + I+P+ ++ IL++G ++G
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 227 AKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFT 286
+A +G+++ R + +++ Y + + + + + M P + +
Sbjct: 408 YEAFGMYGQILKR--GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 287 YALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLH 346
+D K+ HA+ M+ I N++++N++I C D A ++ M ++
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 347 GAFPDSLTYNMIFKCLV------RNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDC 400
G PD T+ + + + ++ K F M +N+ + C I +LF C
Sbjct: 526 GIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 585
Query: 401 DDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAE 446
E A + ++ ++E ++P + N ++ G CSL R E R E
Sbjct: 586 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 631
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 131/306 (42%), Gaps = 16/306 (5%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
T+ + C GR EA + + G+E +V +SL+ C N S + +
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 202 VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWS-KENVMAYDAFLLTLLRA 260
+K PD + +L++G K+G A +M +G S + NV+ +++ + R
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM---LGQSIRLNVVVFNSLIDGWCRL 509
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYAL------DVFVKENDAAHAIPLWDAMVAGGIM 314
++ +E L+ ++M + P + FT + D F K + L+D M I
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKIS 569
Query: 315 PNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESF 374
++ + N +I L +++A + + ++ PD +TYN + +++ E E
Sbjct: 570 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 629
Query: 375 FAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICS 434
F + + P + I +L +D + A ++S M E KP NA+ G C
Sbjct: 630 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP-----NAVTYG-CL 683
Query: 435 LSRFSE 440
+ FS+
Sbjct: 684 MDWFSK 689
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 154/369 (41%), Gaps = 26/369 (7%)
Query: 85 YNYPHSAVKFFRWAGRLQKHSPH--AWNLMVDLLGKNELFDPMWDAIRSMKQEGV----L 138
Y A++ F ++ +L P + ++ L+G + + D + D + + G+ +
Sbjct: 159 YGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRV-DLIADHFDKLCRGGIEPSGV 217
Query: 139 TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEF 198
+ FV + G +A+ ++ G +V+ N +L + ++ + ++ +
Sbjct: 218 SAHGFV--LDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLS 275
Query: 199 FEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLL 258
G AP+ +F L+ G+ K G +A F M R + +++AY +
Sbjct: 276 LVLDCGP-APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR--GIEPDLIAYSTLIDGYF 332
Query: 259 RASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLI 318
+A + + + F+ +DV+VK D A A ++ M+ GI PN++
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 319 MYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEM 378
Y +I C +G + AF + +++ G P +TY+ + + +R + + +M
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 379 VKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESA-------NALLIG 431
+K +PP + D + + + + VK L +S N+L+ G
Sbjct: 453 IKMGYPPDVVIYGVLV-------DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 432 ICSLSRFSE 440
C L+RF E
Sbjct: 506 WCRLNRFDE 514
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 177/448 (39%), Gaps = 59/448 (13%)
Query: 88 PHSAVKFFRWAGRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSM-----KQEGVL---- 138
P+SA+K+FRWA + P + + +L +N +FD M K VL
Sbjct: 83 PNSALKYFRWA-EISGKDPSFYTI-AHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIR 140
Query: 139 --TLRTFVSAF--QSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTST 194
+L V F + C G ++A+ F G+ +V +L+S+ +
Sbjct: 141 DRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLI 200
Query: 195 AMEFFEEVKGKIAPDGDS-FAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAF 253
A F + +G I P G S +L+ +G KA F +V+ G+ + +++ +
Sbjct: 201 ADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKA-LDFHRLVMERGF-RVGIVSCNK- 257
Query: 254 LLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGI 313
+L L QIE R L ++ D P + F ++ F K + A L+ M GI
Sbjct: 258 VLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGI 317
Query: 314 MPNLIMYNAMI----------------------GLQCN-------------NGEVDNAFR 338
P+LI Y+ +I G++ + +G++ A
Sbjct: 318 EPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASV 377
Query: 339 LLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLF 398
+ M+ G P+ +TY ++ K L ++ ++ E + +++K P+ ++ I
Sbjct: 378 VYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFC 437
Query: 399 DCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYES 458
C + + ++ M++ P L+ G+ R + ML + I +
Sbjct: 438 KCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVV 497
Query: 459 TMNKLKDAFYTEGRSRKDRFDSLFRRWK 486
N L D G R +RFD + ++
Sbjct: 498 VFNSLID-----GWCRLNRFDEALKVFR 520
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 2/227 (0%)
Query: 222 KEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPG 281
K+GN A+ F EM + + NV+ Y+ + + + + + + L+ M + P
Sbjct: 22 KDGNHINAQNLFTEMHEKGIFP--NVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPD 79
Query: 282 LKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLD 341
+ F+ ++ FVKE + A ++ M+ I P I YN+MI C VD+A R+LD
Sbjct: 80 IVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLD 139
Query: 342 EMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCD 401
M G PD +T++ + + K+V F EM + + I
Sbjct: 140 SMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 199
Query: 402 DPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDM 448
D +AA ++ + M+ V P + + + +L G+CS + ED+
Sbjct: 200 DLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 107/233 (45%), Gaps = 4/233 (1%)
Query: 151 CVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDG 210
C G A F M GI +V+ N ++ S C + ++ +I PD
Sbjct: 21 CKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDI 80
Query: 211 DSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSK-ENVMAYDAFLLTLLRASQIEEVLRF 269
+F+ L+ + KE ++A+ + EM+ WS + Y++ + + ++++ R
Sbjct: 81 VTFSALINAFVKERKVSEAEEIYKEML---RWSIFPTTITYNSMIDGFCKQDRVDDAKRM 137
Query: 270 LKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCN 329
L M C P + F+ ++ + K + + ++ M GI+ N + Y +I C
Sbjct: 138 LDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ 197
Query: 330 NGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE 382
G++D A LL+EM+ G PD +T++ + L K++R+ + ++ K+E
Sbjct: 198 VGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 250
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 78/186 (41%)
Query: 286 TYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVL 345
T +D K+ + +A L+ M GI PN++ YN MI C++G +A +LL M+
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73
Query: 346 HGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEA 405
PD +T++ + V+ +KV E E + EM++ PT+ + I D +
Sbjct: 74 KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDD 133
Query: 406 AHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKD 465
A + M P + + L+ G C R +M R I+ T L
Sbjct: 134 AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 193
Query: 466 AFYTEG 471
F G
Sbjct: 194 GFCQVG 199
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 60/144 (41%)
Query: 308 MVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKK 367
M I ++++ A++ C +G NA L EM G FP+ LTYN + + +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 368 VRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANA 427
+ + M++ + P +A I A EI+ M+ + P + N+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 428 LLIGICSLSRFSEVRRHAEDMLDR 451
++ G C R + +R + M +
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASK 144
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 133/310 (42%), Gaps = 4/310 (1%)
Query: 138 LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAME 197
L + F S Y +G A + + M GI +VV L+ +C ++ + A
Sbjct: 354 LDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC-QDGRIYEAFG 412
Query: 198 FFEEV-KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLT 256
+ ++ K + P +++ L++G+ K GN + +M I++G+ + V+ Y +
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM-IKMGYPPD-VVIYGVLVDG 470
Query: 257 LLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPN 316
L + + +RF M + F +D + + N A+ ++ M GI P+
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 317 LIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFA 376
+ + ++ + G ++ A L M G PD+L Y + ++ K F
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590
Query: 377 EMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLS 436
M +N+ + C I +LF C E A + ++ ++E ++P + N ++ G CSL
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 650
Query: 437 RFSEVRRHAE 446
R E R E
Sbjct: 651 RLDEAERIFE 660
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 137/346 (39%), Gaps = 34/346 (9%)
Query: 109 WNLMVDLLGKNEL-FDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMD 167
+ ++VD L K L M +++ + Q L + F S +C RF+EA+ F +M
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 168 NHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEK----- 222
+GI+ DV +++ E FF K + PD ++ L++ + K
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPT 583
Query: 223 ---------EGNAAKAKTTFGEMVIRV-------------------GWSKENVMAYDAFL 254
+ N A +VI + G + +++ Y+ +
Sbjct: 584 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643
Query: 255 LTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIM 314
+++E R +++K P T + V K ND AI ++ M G
Sbjct: 644 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 703
Query: 315 PNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESF 374
PN + Y ++ + +++ +F+L +EM G P ++Y++I L + +V E +
Sbjct: 704 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 763
Query: 375 FAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKP 420
F + + + P A I A ++ +M+ N VKP
Sbjct: 764 FHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 177/448 (39%), Gaps = 59/448 (13%)
Query: 88 PHSAVKFFRWAGRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSM-----KQEGVL---- 138
P+SA+K+FRWA + P + + +L +N +FD M K VL
Sbjct: 83 PNSALKYFRWA-EISGKDPSFYTI-AHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIR 140
Query: 139 --TLRTFVSAF--QSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTST 194
+L V F + C G ++A+ F G+ +V +L+S+ +
Sbjct: 141 DRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLI 200
Query: 195 AMEFFEEVKGKIAPDGDS-FAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAF 253
A F + +G I P G S +L+ +G KA F +V+ G+ + +++ +
Sbjct: 201 ADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKA-LDFHRLVMERGF-RVGIVSCNK- 257
Query: 254 LLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGI 313
+L L QIE R L ++ D P + F ++ F K + A L+ M GI
Sbjct: 258 VLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGI 317
Query: 314 MPNLIMYNAMI----------------------GLQCN-------------NGEVDNAFR 338
P+LI Y+ +I G++ + +G++ A
Sbjct: 318 EPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASV 377
Query: 339 LLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLF 398
+ M+ G P+ +TY ++ K L ++ ++ E + +++K P+ ++ I
Sbjct: 378 VYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFC 437
Query: 399 DCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYES 458
C + + ++ M++ P L+ G+ R + ML + I +
Sbjct: 438 KCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVV 497
Query: 459 TMNKLKDAFYTEGRSRKDRFDSLFRRWK 486
N L D G R +RFD + ++
Sbjct: 498 VFNSLID-----GWCRLNRFDEALKVFR 520
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 82/200 (41%), Gaps = 4/200 (2%)
Query: 155 RFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK-GKIAPDGDSF 213
R +A F+ + +E D+V N+++ C + A FE +K P+ +
Sbjct: 616 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYC-SLRRLDEAERIFELLKVTPFGPNTVTL 674
Query: 214 AILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVM 273
IL+ K + A F M + SK N + Y + ++ IE + + M
Sbjct: 675 TILIHVLCKNNDMDGAIRMFSIMAEK--GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 732
Query: 274 KDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEV 333
++ P + ++ +D K A ++ + ++P+++ Y +I C G +
Sbjct: 733 QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 792
Query: 334 DNAFRLLDEMVLHGAFPDSL 353
A L + M+ +G PD L
Sbjct: 793 VEAALLYEHMLRNGVKPDDL 812
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 133/320 (41%), Gaps = 49/320 (15%)
Query: 137 VLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAM 196
++T + V+ F C++ +A+ M+ GI++DVV V+++L C+ A+
Sbjct: 13 IVTASSLVNGF---CLSNSIKDAVYVAGQMEKMGIKRDVV-VDTILIDTLCKNRLVVPAL 68
Query: 197 EFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLL 255
E + +K + I+P NV+ Y + +
Sbjct: 69 EVLKRMKDRGISP-------------------------------------NVVTYSSLIT 91
Query: 256 TLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMP 315
L ++ ++ + R L M P + F+ +D + K + ++ M+ I P
Sbjct: 92 GLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDP 151
Query: 316 NLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFF 375
N+ Y+++I C + VD A ++LD M+ G P+ +TY+ + ++ +V +
Sbjct: 152 NVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLL 211
Query: 376 AEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGIC-- 433
+M + + +C I F + A ++ YM N + P S N +L G+
Sbjct: 212 DDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFAN 271
Query: 434 -----SLSRFSEVRRHAEDM 448
+LSRF +++ D+
Sbjct: 272 GEVEKALSRFEHMQKTRNDL 291
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 154/386 (39%), Gaps = 50/386 (12%)
Query: 109 WNLMVDLLGKNELFDPMWDAIRSMKQ----EGVLTLRTFVSAFQSYCVAGRFNEAIMSFD 164
+N ++ LG+N M D + M + V+TL ++ C + R +EA+ F+
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTL---CKSRRVDEALEVFE 353
Query: 165 VM------DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK--GKIAPDGDSFAIL 216
M D + I+ D + N+L+ +C + + A E +K + AP+ ++ L
Sbjct: 354 KMRGKRTDDGNVIKADSIHFNTLIDGLC-KVGRLKEAEELLVRMKLEERCAPNAVTYNCL 412
Query: 217 LEGWEKEGNAAKAK-------------------TTFGEMVIRVGWS-------------- 243
++G+ + G AK T G M G +
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Query: 244 KENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIP 303
K NV+ Y + S +E+ + + + M + C P K + + + AI
Sbjct: 473 KGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIR 532
Query: 304 LWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLV 363
+ + + GG +L+ YN +IGL C+ + + +L +M G PDS+TYN +
Sbjct: 533 VVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Query: 364 RNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYM-VENHVKPLH 422
++K E +M ++ PT + A I + + A +++ M + + V P
Sbjct: 593 KHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 423 ESANALLIGICSLSRFSEVRRHAEDM 448
N L+ L F + E+M
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEM 678
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 156/375 (41%), Gaps = 33/375 (8%)
Query: 108 AWNLMVDLL-GKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVM 166
AW+++ DL+ K L P ++A+ +S R N+ ++ M
Sbjct: 278 AWDILSDLMKNKTPLEAPPFNAL--------------LSCLGRNMDISRMNDLVLK---M 320
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGD-------SFAILLEG 219
D I DVV + L++++C + + A+E FE+++GK DG+ F L++G
Sbjct: 321 DEVKIRPDVVTLGILINTLC-KSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDG 379
Query: 220 WEKEGNAAKAKTTFGEMVIRVGWSKE---NVMAYDAFLLTLLRASQIEEVLRFLKVMKDH 276
K G +A+ E+++R+ + N + Y+ + RA ++E + MK+
Sbjct: 380 LCKVGRLKEAE----ELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
Query: 277 DCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNA 336
+ P + + + + A+ + M G+ N++ Y +I C+ V+ A
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA 495
Query: 337 FRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAM 396
++M+ G PD+ Y + L + ++ + ++ + + I +
Sbjct: 496 MYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGL 555
Query: 397 LFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIY 456
D ++ E +E+ + M + KP + N L+ F V R E M + +
Sbjct: 556 FCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPT 615
Query: 457 ESTMNKLKDAFYTEG 471
+T + DA+ + G
Sbjct: 616 VTTYGAVIDAYCSVG 630
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 130/330 (39%), Gaps = 55/330 (16%)
Query: 102 QKHSPHA--WNLMVDLLGKNELFDPMWDAIRSMKQE----GVLTLRTFVSAFQSYCVAGR 155
++ +P+A +N ++D + + + + MK++ V+T+ T V C
Sbjct: 400 ERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGM---CRHHG 456
Query: 156 FNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFA 214
N A++ F M+ G++ +VV +L+ + CC + AM ++E+ ++ +PD +
Sbjct: 457 LNMAVVFFMDMEKEGVKGNVVTYMTLIHA-CCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 215 ILLEGW---EKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLK 271
L+ G ++ +A + E G +++AY+ + + E+V L
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKE-----GGFSLDLLAYNMLIGLFCDKNNTEKVYEMLT 570
Query: 272 VMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNG 331
M+ P + + F K D + + M G+ P + Y A+I C+ G
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
Query: 332 EVDNAFRLLDEMVLH--------------------GAF----------------PDSLTY 355
E+D A +L +M LH G F P+ TY
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 356 NMIFKCLVRNKKVRETESFFAEMVKNEWPP 385
N +FKCL + EMV+ P
Sbjct: 691 NALFKCLNEKTQGETLLKLMDEMVEQSCEP 720
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 7/225 (3%)
Query: 141 RTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFE 200
+ + + C R ++AI + + G D++A N L+ + C++N T E
Sbjct: 512 KIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG-LFCDKNNTEKVYEMLT 570
Query: 201 --EVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLL 258
E +GK PD ++ L+ + K + + +M R V Y A +
Sbjct: 571 DMEKEGK-KPDSITYNTLISFFGKHKDFESVERMMEQM--REDGLDPTVTTYGAVIDAYC 627
Query: 259 RASQIEEVLRFLKVMKDHDCF-PGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNL 317
+++E L+ K M H P + ++ F K + A+ L + M + PN+
Sbjct: 628 SVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNV 687
Query: 318 IMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCL 362
YNA+ + + +L+DEMV P+ +T ++ + L
Sbjct: 688 ETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 152/383 (39%), Gaps = 44/383 (11%)
Query: 59 PEIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGRLQ--KHSPHAWNLMVDLL 116
P E AL + G+ +VLK +Y +A+ FF W R KH H + MV L
Sbjct: 316 PAAEEALQNLGLRIDAYQANQVLKQMNDY-GNALGFFYWLKRQPGFKHDGHTYTTMVGNL 374
Query: 117 GKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDV 175
G+ + F + + M ++G T+ SY A NEA+ F+ M G + D
Sbjct: 375 GRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDR 434
Query: 176 VAVNSLLSSICCEENQTSTAMEFFEEVK-GKIAPDGDSFAILLEGWEKEGNAAKAKTTFG 234
V +L+ I + AM+ ++ ++ G ++PD ++++++ K G+ A F
Sbjct: 435 VTYCTLI-DIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFC 493
Query: 235 EMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVK 294
EMV D C P L + +D+ K
Sbjct: 494 EMV-------------------------------------DQGCTPNLVTYNIMMDLHAK 516
Query: 295 ENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLT 354
+ +A+ L+ M G P+ + Y+ ++ + + G ++ A + EM PD
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 355 YNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMV 414
Y ++ + V + ++ M+ P C + ++ + A+E+ M+
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 415 ENHVKPLHESANALLIGICSLSR 437
++P ++ LL+ C+ R
Sbjct: 637 ALGLRPSLQTY-TLLLSCCTDGR 658
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 148/383 (38%), Gaps = 67/383 (17%)
Query: 148 QSYCVAGRFNEAIMSF-----------DVMDNHGIEKDVVAVNSLLSSICCEENQTSTAM 196
+ YC +G E + S + + N G+ D N +L + N A+
Sbjct: 293 RQYCNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQM----NDYGNAL 348
Query: 197 EFFEEVKGK--IAPDGDSFAILLEGWEKEGNAAKAKTTFGEM------VIRVGWSKENVM 248
FF +K + DG ++ ++ GN +AK FG + ++R G + N +
Sbjct: 349 GFFYWLKRQPGFKHDGHTYTTMV------GNLGRAKQ-FGAINKLLDEMVRDG-CQPNTV 400
Query: 249 AYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAM 308
Y+ + + RA+ + E + M++ C P + +D+ K A+ ++ M
Sbjct: 401 TYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM 460
Query: 309 VAGGIMP-----------------------------------NLIMYNAMIGLQCNNGEV 333
AGG+ P NL+ YN M+ L
Sbjct: 461 QAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNY 520
Query: 334 DNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAA 393
NA +L +M G PD +TY+++ + L + E E+ F EM + W P
Sbjct: 521 QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLL 580
Query: 394 IAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRI 453
+ + + E A + + M+ ++P + N+LL +++ +E ++ML +
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Query: 454 IIYESTMNKLKDAFYTEGRSRKD 476
T L T+GRS+ D
Sbjct: 641 RPSLQTYTLLLSCC-TDGRSKLD 662
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 152/383 (39%), Gaps = 44/383 (11%)
Query: 59 PEIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGRLQ--KHSPHAWNLMVDLL 116
P E AL + G+ +VLK +Y +A+ FF W R KH H + MV L
Sbjct: 316 PAAEEALQNLGLRIDAYQANQVLKQMNDY-GNALGFFYWLKRQPGFKHDGHTYTTMVGNL 374
Query: 117 GKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDV 175
G+ + F + + M ++G T+ SY A NEA+ F+ M G + D
Sbjct: 375 GRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDR 434
Query: 176 VAVNSLLSSICCEENQTSTAMEFFEEVK-GKIAPDGDSFAILLEGWEKEGNAAKAKTTFG 234
V +L+ I + AM+ ++ ++ G ++PD ++++++ K G+ A F
Sbjct: 435 VTYCTLI-DIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFC 493
Query: 235 EMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVK 294
EMV D C P L + +D+ K
Sbjct: 494 EMV-------------------------------------DQGCTPNLVTYNIMMDLHAK 516
Query: 295 ENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLT 354
+ +A+ L+ M G P+ + Y+ ++ + + G ++ A + EM PD
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 355 YNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMV 414
Y ++ + V + ++ M+ P C + ++ + A+E+ M+
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 415 ENHVKPLHESANALLIGICSLSR 437
++P ++ LL+ C+ R
Sbjct: 637 ALGLRPSLQTY-TLLLSCCTDGR 658
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 148/383 (38%), Gaps = 67/383 (17%)
Query: 148 QSYCVAGRFNEAIMSF-----------DVMDNHGIEKDVVAVNSLLSSICCEENQTSTAM 196
+ YC +G E + S + + N G+ D N +L + N A+
Sbjct: 293 RQYCNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQM----NDYGNAL 348
Query: 197 EFFEEVKGK--IAPDGDSFAILLEGWEKEGNAAKAKTTFGEM------VIRVGWSKENVM 248
FF +K + DG ++ ++ GN +AK FG + ++R G + N +
Sbjct: 349 GFFYWLKRQPGFKHDGHTYTTMV------GNLGRAKQ-FGAINKLLDEMVRDG-CQPNTV 400
Query: 249 AYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAM 308
Y+ + + RA+ + E + M++ C P + +D+ K A+ ++ M
Sbjct: 401 TYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM 460
Query: 309 VAGGIMP-----------------------------------NLIMYNAMIGLQCNNGEV 333
AGG+ P NL+ YN M+ L
Sbjct: 461 QAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNY 520
Query: 334 DNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAA 393
NA +L +M G PD +TY+++ + L + E E+ F EM + W P
Sbjct: 521 QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLL 580
Query: 394 IAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRI 453
+ + + E A + + M+ ++P + N+LL +++ +E ++ML +
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Query: 454 IIYESTMNKLKDAFYTEGRSRKD 476
T L T+GRS+ D
Sbjct: 641 RPSLQTYTLLLSCC-TDGRSKLD 662
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 152/383 (39%), Gaps = 44/383 (11%)
Query: 59 PEIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGRLQ--KHSPHAWNLMVDLL 116
P E AL + G+ +VLK +Y +A+ FF W R KH H + MV L
Sbjct: 316 PAAEEALQNLGLRIDAYQANQVLKQMNDY-GNALGFFYWLKRQPGFKHDGHTYTTMVGNL 374
Query: 117 GKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDV 175
G+ + F + + M ++G T+ SY A NEA+ F+ M G + D
Sbjct: 375 GRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDR 434
Query: 176 VAVNSLLSSICCEENQTSTAMEFFEEVK-GKIAPDGDSFAILLEGWEKEGNAAKAKTTFG 234
V +L+ I + AM+ ++ ++ G ++PD ++++++ K G+ A F
Sbjct: 435 VTYCTLI-DIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFC 493
Query: 235 EMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVK 294
EMV D C P L + +D+ K
Sbjct: 494 EMV-------------------------------------DQGCTPNLVTYNIMMDLHAK 516
Query: 295 ENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLT 354
+ +A+ L+ M G P+ + Y+ ++ + + G ++ A + EM PD
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 355 YNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMV 414
Y ++ + V + ++ M+ P C + ++ + A+E+ M+
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 415 ENHVKPLHESANALLIGICSLSR 437
++P ++ LL+ C+ R
Sbjct: 637 ALGLRPSLQTY-TLLLSCCTDGR 658
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 148/383 (38%), Gaps = 67/383 (17%)
Query: 148 QSYCVAGRFNEAIMSF-----------DVMDNHGIEKDVVAVNSLLSSICCEENQTSTAM 196
+ YC +G E + S + + N G+ D N +L + N A+
Sbjct: 293 RQYCNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQM----NDYGNAL 348
Query: 197 EFFEEVKGK--IAPDGDSFAILLEGWEKEGNAAKAKTTFGEM------VIRVGWSKENVM 248
FF +K + DG ++ ++ GN +AK FG + ++R G + N +
Sbjct: 349 GFFYWLKRQPGFKHDGHTYTTMV------GNLGRAKQ-FGAINKLLDEMVRDG-CQPNTV 400
Query: 249 AYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAM 308
Y+ + + RA+ + E + M++ C P + +D+ K A+ ++ M
Sbjct: 401 TYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM 460
Query: 309 VAGGIMP-----------------------------------NLIMYNAMIGLQCNNGEV 333
AGG+ P NL+ YN M+ L
Sbjct: 461 QAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNY 520
Query: 334 DNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAA 393
NA +L +M G PD +TY+++ + L + E E+ F EM + W P
Sbjct: 521 QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLL 580
Query: 394 IAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRI 453
+ + + E A + + M+ ++P + N+LL +++ +E ++ML +
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Query: 454 IIYESTMNKLKDAFYTEGRSRKD 476
T L T+GRS+ D
Sbjct: 641 RPSLQTYTLLLSCC-TDGRSKLD 662
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 102/462 (22%), Positives = 180/462 (38%), Gaps = 55/462 (11%)
Query: 69 GIHPSD---DCVREVLKLSYNYPHSAVKFFRWAGRLQKHSPHAWNLMVDLLGKNELFDPM 125
G+ PS + V + L S + + +KF + K +N+++ + K + D
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 126 WDAIRSMKQEG----VLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDN------------- 168
++ M+QEG V T + F +AGR +EA+ ++M
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGF---LIAGRVDEALKQLEMMRVRKLNPNEATIRTF 291
Query: 169 -HGI-----------------EKDV----VAVNSLLSSICCEENQTSTAM-EFFEEV--K 203
HGI EKD V +++L C N + +F ++ +
Sbjct: 292 VHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVL--YCLSNNSMAKETGQFLRKIGER 349
Query: 204 GKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQI 263
G I PD +F + K + + F V R K Y + LL A +
Sbjct: 350 GYI-PDSSTFNAAMSCLLKGHDLVETCRIFDGFVSR--GVKPGFNGYLVLVQALLNAQRF 406
Query: 264 EEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAM 323
E R+LK M + + +D K +A M GI PNL+ +N
Sbjct: 407 SEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTF 466
Query: 324 IGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEW 383
+ G+V +L+++++HG PD +T+++I CL R K++++ F EM++
Sbjct: 467 LSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGI 526
Query: 384 PPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRR 443
P I D + + ++++ M EN + P + NA + C + + +
Sbjct: 527 EPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEE 586
Query: 444 HAEDMLDRRIIIYESTMNKLKDAFYTEGRSRKDR--FDSLFR 483
+ ML + T + L A GR + R F S+ R
Sbjct: 587 LLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIER 628
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 2/245 (0%)
Query: 143 FVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV 202
++ Q+ A RF+E M G+ V + N+++ +C + AM E
Sbjct: 393 YLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQ 452
Query: 203 KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQ 262
I+P+ +F L G+ G+ K ++++ G+ K +V+ + + L RA +
Sbjct: 453 DRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVH-GF-KPDVITFSLIINCLCRAKE 510
Query: 263 IEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNA 322
I++ K M + P + + D ++ L+ M G+ P+L YNA
Sbjct: 511 IKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNA 570
Query: 323 MIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE 382
I C +V A LL M+ G PD+ TY+ + K L + + E F+ + ++
Sbjct: 571 TIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHG 630
Query: 383 WPPTS 387
P S
Sbjct: 631 CVPDS 635
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 99/250 (39%), Gaps = 9/250 (3%)
Query: 130 RSMKQEGVLTLRTFVSAFQS----YCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSI 185
R +KQ GV L + V ++ + C A R A M M + GI ++V N+ LS
Sbjct: 411 RYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGY 470
Query: 186 CCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKE 245
+ + + PD +F++++ + A F EM+ W E
Sbjct: 471 SVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEML---EWGIE 527
Query: 246 -NVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPL 304
N + Y+ + + + ++ MK++ P L + + F K A L
Sbjct: 528 PNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEEL 587
Query: 305 WDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVR 364
M+ G+ P+ Y+ +I +G A + + HG PDS T ++ + +R
Sbjct: 588 LKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEELDLR 647
Query: 365 NKKV-RETES 373
+ RET S
Sbjct: 648 KSGLSRETVS 657
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 114/253 (45%), Gaps = 7/253 (2%)
Query: 142 TFVSAFQSYCVAGRFNEAI-MSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFE 200
T+ V+G ++A+ M ++D G+ D N L+S +C + F E
Sbjct: 417 TYGILIHGLVVSGHMDDAVNMKVKLID-RGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSE 475
Query: 201 EVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
+ I PD +A L++G+ + G+ +A+ F V + K +V+ ++A + R+
Sbjct: 476 MLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEK--GVKVDVVHHNAMIKGFCRS 533
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
++E L + M + P ++ +D +VK+ D A AI ++ M PN++ Y
Sbjct: 534 GMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTY 593
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAE-MV 379
++I C G+ A EM L P+ +TY + + L + E ++ E M+
Sbjct: 594 TSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMM 653
Query: 380 KNEWPP--TSSNC 390
N+ P + NC
Sbjct: 654 TNKCVPNEVTFNC 666
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 165/427 (38%), Gaps = 53/427 (12%)
Query: 91 AVKFFRWAGRLQK----HSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGV-LTLRTFVS 145
VK F W +K + A + + LL + +F+ + D + +++ E V LT
Sbjct: 80 GVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSH 139
Query: 146 AFQSYCVAGRFNEAIMSFD-VMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-- 202
+Y +G ++A+ +D V++ + DV+A NSLLS + + + A + ++E+
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLS-LLVKSRRLGDARKVYDEMCD 198
Query: 203 KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSK---ENVMAYDAFLLTLLR 259
+G + D S IL++G EG K G +I W K N++ Y+ + +
Sbjct: 199 RGD-SVDNYSTCILVKGMCNEG-----KVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCK 252
Query: 260 ASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIM 319
IE K +K P L+ F ++ F KE D + L + G+ ++
Sbjct: 253 LGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWF 312
Query: 320 YNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMV 379
N +I + +G + + ++ + PD TYN++ L + K F E
Sbjct: 313 LNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEAS 372
Query: 380 KNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKP--------LHESA------ 425
K P + + A I + + A ++ M E KP +H
Sbjct: 373 KKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD 432
Query: 426 ---------------------NALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLK 464
N L+ G+C RF + +MLDR I+ L
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLI 492
Query: 465 DAFYTEG 471
D F G
Sbjct: 493 DGFIRSG 499
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/335 (19%), Positives = 126/335 (37%), Gaps = 35/335 (10%)
Query: 170 GIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAK 228
G ++V N+++ C + A F+E+K K P ++F ++ G+ KEG+
Sbjct: 235 GCIPNIVFYNTIIGGYC-KLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVA 293
Query: 229 AKTTFGEMVIR----------------------------VGW-----SKENVMAYDAFLL 255
+ E+ R +GW K +V Y+ +
Sbjct: 294 SDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILIN 353
Query: 256 TLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMP 315
L + + E + FL P + + + K + A L M G P
Sbjct: 354 RLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKP 413
Query: 316 NLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFF 375
+++ Y +I +G +D+A + +++ G PD+ YNM+ L + + + F
Sbjct: 414 DIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLF 473
Query: 376 AEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSL 435
+EM+ P + A I D + A +++S VE VK NA++ G C
Sbjct: 474 SEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRS 533
Query: 436 SRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTE 470
E M + ++ + T + + D + +
Sbjct: 534 GMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQ 568
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 113/282 (40%), Gaps = 4/282 (1%)
Query: 174 DVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTT 232
DV N L++ +C +E + A+ F +E K + P+ S+A L++ + K A
Sbjct: 344 DVATYNILINRLC-KEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 233 FGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVF 292
+M R K +++ Y + L+ + +++ + + D P + +
Sbjct: 403 LLQMAER--GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460
Query: 293 VKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDS 352
K A L+ M+ I+P+ +Y +I +G+ D A ++ V G D
Sbjct: 461 CKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDV 520
Query: 353 LTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSY 412
+ +N + K R+ + E + M + P + I D A +I+ Y
Sbjct: 521 VHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRY 580
Query: 413 MVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRII 454
M +N KP + +L+ G C F ++M R ++
Sbjct: 581 MEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLV 622
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 21/239 (8%)
Query: 147 FQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-KGK 205
+ +C +G +EA+ + M+ + D ++++ ++ +TA++ F + K K
Sbjct: 527 IKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYV-KQQDMATAIKIFRYMEKNK 585
Query: 206 IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLR-ASQIE 264
P+ ++ L+ G+ +G+ A+ TF EM +R NV+ Y + +L + +S +E
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRD--LVPNVVTYTTLIRSLAKESSTLE 643
Query: 265 EVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDA-AHAIP-------------LWDAMVA 310
+ + + ++M + C P F L FVK+ A P + M +
Sbjct: 644 KAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKS 703
Query: 311 GGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFK--CLVRNKK 367
G + YN+ + C +G V A D+MV G PD +++ I C+V N K
Sbjct: 704 DGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSK 762
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 168/410 (40%), Gaps = 49/410 (11%)
Query: 39 TPNVSPVARTLCNLLTRTS---PPEIETALTS-SGIHPSDDCVREVLKLSYNYPHSAVKF 94
+ +SP+AR + + + P + + L + PS V EVLKL N A KF
Sbjct: 88 SERLSPIARFVLDAFRKNRNHWGPSVVSELNKLRRVTPS--IVAEVLKLG-NDAAVAAKF 144
Query: 95 FRWAGRLQ--KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEG-VLTLRTFVSAFQSYC 151
F WAG+ + KH A+N L +N F M +G + + F + +
Sbjct: 145 FHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHA 204
Query: 152 VAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK-GKIAPDG 210
R ++ M G + V N ++ ++ + A+ +E+ K + +
Sbjct: 205 DNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALV-KNGYFDLALAVYEDFKEDGLVEES 263
Query: 211 DSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFL 270
+F IL++G L +A +IEE+L L
Sbjct: 264 TTFMILVKG-------------------------------------LCKAGRIEEMLEIL 286
Query: 271 KVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNN 330
+ M+++ C P + +T + V E + ++ +WD M I P+++ Y ++ C +
Sbjct: 287 QRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKD 346
Query: 331 GEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNC 390
G V+ + L EM D Y ++ + V + KVR + + ++V + +
Sbjct: 347 GRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIY 406
Query: 391 AAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSE 440
A I L + + A++++ +E ++P E+ + +++ ++R S+
Sbjct: 407 NAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSD 456
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 96/253 (37%)
Query: 222 KEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPG 281
K GN A F + K + AY+AF L R + ++M P
Sbjct: 133 KLGNDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPS 192
Query: 282 LKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLD 341
K F + + +++ M G P + +YN ++ NG D A + +
Sbjct: 193 EKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYE 252
Query: 342 EMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCD 401
+ G +S T+ ++ K L + ++ E M +N P A I L
Sbjct: 253 DFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEG 312
Query: 402 DPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMN 461
+ +A+ +W M + +KP + L++G+C R +M ++I+I
Sbjct: 313 NLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYR 372
Query: 462 KLKDAFYTEGRSR 474
L + F +G+ R
Sbjct: 373 VLIEGFVADGKVR 385
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 141/346 (40%), Gaps = 23/346 (6%)
Query: 138 LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAME 197
L + +F + +C + + ++ +F + G + DVV N+LL +C E+ + S A+
Sbjct: 139 LNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED-RISEALA 197
Query: 198 FF----------------EEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVG 241
F + V+ + P +F L+ G EG +A +MV +
Sbjct: 198 LFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK-- 255
Query: 242 WSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHA 301
+V+ Y + + + + L L M++ P + ++ +D K+ + A
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 302 IPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKC 361
L+ M+ GI PN+ YN MI C+ G +A RLL +M+ PD LT+N +
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 362 LVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPL 421
V+ K+ E E EM+ P + + I + + A ++ M V
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTF 435
Query: 422 HESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAF 467
N ++ C R E + ++ R ++ +T N L F
Sbjct: 436 ----NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/299 (19%), Positives = 128/299 (42%), Gaps = 6/299 (2%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
T+ + C G A+ M+ I+ DVV ++++ +C + + + F E
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 202 VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRAS 261
++ IAP+ ++ +++G+ G + A+ +M+ R +V+ ++A + ++
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER--EINPDVLTFNALISASVKEG 380
Query: 262 QIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYN 321
++ E + M FP + + F K N A ++D M + P+++ +N
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFN 436
Query: 322 AMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKN 381
+I + C VD +LL E+ G ++ TYN + + + F EM+ +
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Query: 382 EWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSE 440
P + C + + + E A E++ + + + + N ++ G+C S+ E
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 127/284 (44%), Gaps = 23/284 (8%)
Query: 190 NQTSTAMEFFEEVKGKIAP-DGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVM 248
N+ A+ + +++ + P + SF IL++ + + + +TFG++ ++G+ + +V+
Sbjct: 120 NRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT-KLGF-QPDVV 177
Query: 249 AYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAM 308
++ L L +I E L AL ++ E A+ L+D M
Sbjct: 178 TFNTLLHGLCLEDRISEAL--------------------ALFGYMVETGFLEAVALFDQM 217
Query: 309 VAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKV 368
V G+ P +I +N +I C G V A L+++MV G D +TY I + +
Sbjct: 218 VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDT 277
Query: 369 RETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANAL 428
+ + ++M + P +A I L A ++S M+E + P + N +
Sbjct: 278 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM 337
Query: 429 LIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR 472
+ G CS R+S+ +R DM++R I T N L A EG+
Sbjct: 338 IDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 114/276 (41%), Gaps = 7/276 (2%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMD 167
+N M+ K+ FD M V+T T + YC A R +E + +
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDV---YCRAKRVDEGMQLLREIS 459
Query: 168 NHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNA 226
G+ + N+L+ C E + + A + F+E + + PD + ILL G+ +
Sbjct: 460 RRGLVANTTTYNTLIHGFC-EVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 227 AKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFT 286
+A F VI++ + +AY+ + + + S+++E + H P ++ +
Sbjct: 519 EEALELFE--VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 576
Query: 287 YALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLH 346
+ F ++ + A L+ M G P+ YN +I GE+D + L+ EM +
Sbjct: 577 VMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN 636
Query: 347 GAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE 382
G D+ T M + + R E++ + E
Sbjct: 637 GFSGDAFTIKMAEEIICRVSDEEIIENYLRPKINGE 672
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/345 (19%), Positives = 133/345 (38%), Gaps = 44/345 (12%)
Query: 109 WNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMD 167
++ ++D L K+ M ++G+ + T+ +C GR+++A M
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 168 NHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNA 226
I DV+ N+L+S+ +E + A + +E+ + I PD ++ ++ G+ K
Sbjct: 359 EREINPDVLTFNALISA-SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417
Query: 227 AKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFT 286
AK F M + +V+ ++ + RA +++E ++ L+ + +
Sbjct: 418 DDAKHMFDLM------ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 287 YALDVFVKENDAAHAIPLWDAMVAGGIMPNLIM--------------------------- 319
+ F + ++ A L+ M++ G+ P+ I
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531
Query: 320 --------YNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRET 371
YN +I C +VD A+ L + +HG PD TYN++ + +
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 591
Query: 372 ESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVEN 416
F +M N P +S I + + + E+ S M N
Sbjct: 592 NVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN 636
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 125/345 (36%), Gaps = 33/345 (9%)
Query: 141 RTFVSAFQSYCVAGRF------NEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTST 194
R F +A V G F + AI + M+ I ++ + N L+ C + +
Sbjct: 101 RPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFS 160
Query: 195 AMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFL 254
F + K PD +F LL G E ++A FG MV FL
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV------------ETGFL 208
Query: 255 LTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIM 314
+ Q+ E+ P + F ++ E A L + MV G+
Sbjct: 209 EAVALFDQMVEI----------GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLH 258
Query: 315 PNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESF 374
+++ Y ++ C G+ +A LL +M PD + Y+ I L ++ + +
Sbjct: 259 IDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYL 318
Query: 375 FAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICS 434
F+EM++ P I A + M+E + P + NAL+
Sbjct: 319 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 435 LSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRKDRFD 479
+ E + ++ML R I T N + F + +RFD
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF-----CKHNRFD 418
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 153/386 (39%), Gaps = 50/386 (12%)
Query: 109 WNLMVDLLGKNELFDPMWDAIRSMKQ----EGVLTLRTFVSAFQSYCVAGRFNEAIMSFD 164
+N ++ LG+N M D + M + V+TL ++ C + R +EA+ F+
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTL---CKSRRVDEALEVFE 353
Query: 165 VM------DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK--GKIAPDGDSFAIL 216
M D + I+ D + N+L+ +C + + A E +K + P+ ++ L
Sbjct: 354 QMRGKRTDDGNVIKADSIHFNTLIDGLC-KVGRLKEAEELLVRMKLEERCVPNAVTYNCL 412
Query: 217 LEGWEKEGNAAKAK-------------------TTFGEMVIRVGWS-------------- 243
++G+ + G AK T G M G +
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Query: 244 KENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIP 303
K NV+ Y + S +E+ + + + M + C P K + + + AI
Sbjct: 473 KGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIR 532
Query: 304 LWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLV 363
+ + + GG +L+ YN +IGL C+ + + +L +M G PDS+TYN +
Sbjct: 533 VVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Query: 364 RNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYM-VENHVKPLH 422
++K E +M ++ PT + A I + + A +++ M + + V P
Sbjct: 593 KHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 423 ESANALLIGICSLSRFSEVRRHAEDM 448
N L+ L F + E+M
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEM 678
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 156/375 (41%), Gaps = 33/375 (8%)
Query: 108 AWNLMVDLL-GKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVM 166
AW+++ DL+ K L P ++A+ +S R N+ ++ M
Sbjct: 278 AWDILSDLMKNKTPLEAPPFNAL--------------LSCLGRNMDISRMNDLVLK---M 320
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGD-------SFAILLEG 219
D I DVV + L++++C + + A+E FE+++GK DG+ F L++G
Sbjct: 321 DEVKIRPDVVTLGILINTLC-KSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDG 379
Query: 220 WEKEGNAAKAKTTFGEMVIRVGWSKE---NVMAYDAFLLTLLRASQIEEVLRFLKVMKDH 276
K G +A+ E+++R+ + N + Y+ + RA ++E + MK+
Sbjct: 380 LCKVGRLKEAE----ELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
Query: 277 DCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNA 336
+ P + + + + A+ + M G+ N++ Y +I C+ V+ A
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA 495
Query: 337 FRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAM 396
++M+ G PD+ Y + L + ++ + ++ + + I +
Sbjct: 496 MYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGL 555
Query: 397 LFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIY 456
D ++ E +E+ + M + KP + N L+ F V R E M + +
Sbjct: 556 FCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPT 615
Query: 457 ESTMNKLKDAFYTEG 471
+T + DA+ + G
Sbjct: 616 VTTYGAVIDAYCSVG 630
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 127/322 (39%), Gaps = 55/322 (17%)
Query: 106 PHA--WNLMVDLLGKNELFDPMWDAIRSMKQE----GVLTLRTFVSAFQSYCVAGRFNEA 159
P+A +N ++D + + + + MK++ V+T+ T V C N A
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGM---CRHHGLNMA 460
Query: 160 IMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLE 218
++ F M+ G++ +VV +L+ + CC + AM ++E+ ++ +PD + L+
Sbjct: 461 VVFFMDMEKEGVKGNVVTYMTLIHA-CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 219 GW---EKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKD 275
G ++ +A + E G +++AY+ + + E+V L M+
Sbjct: 520 GLCQVRRDHDAIRVVEKLKE-----GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEK 574
Query: 276 HDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDN 335
P + + F K D + + M G+ P + Y A+I C+ GE+D
Sbjct: 575 EGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDE 634
Query: 336 AFRLLDEMVLH--------------------GAF----------------PDSLTYNMIF 359
A +L +M LH G F P+ TYN +F
Sbjct: 635 ALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALF 694
Query: 360 KCLVRNKKVRETESFFAEMVKN 381
KCL + EMV++
Sbjct: 695 KCLNEKTQGETLLKLMDEMVEH 716
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 144/344 (41%), Gaps = 16/344 (4%)
Query: 113 VDLLGKNELFDPMWDAIRSMKQE--GVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHG 170
+ +L + FD W + ++++ +L+ ++ G + E + +F M+
Sbjct: 110 LHILARMRYFDQAWALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEI 169
Query: 171 IEKD--VVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAK 228
K V N LL + C E + A FE++ + PD + ILL G+++ G+
Sbjct: 170 FRKKFGVDEFNILLRAFCTE-REMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTA 228
Query: 229 AKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYA 288
+ + EMV R G+ K N + Y + + E LR + M D ++ T
Sbjct: 229 TELFYHEMVKR-GF-KPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTL 286
Query: 289 LDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGA 348
+ + A L+D + G+ P+ YNA++ G+V A +++ EM G
Sbjct: 287 IHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGI 346
Query: 349 FPDSLTYNMIFKCLVRNKK--VRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAA 406
PDS+T++ +F ++++K+ ++ +M + P + + + +
Sbjct: 347 EPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLG 406
Query: 407 HEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLD 450
++W YM+E P + L +C+ RR A D +
Sbjct: 407 LDLWKYMLEKGYCPHGHALELLTTALCA-------RRRANDAFE 443
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 153/386 (39%), Gaps = 50/386 (12%)
Query: 109 WNLMVDLLGKNELFDPMWDAIRSMKQ----EGVLTLRTFVSAFQSYCVAGRFNEAIMSFD 164
+N ++ LG+N M D + M + V+TL ++ C + R +EA+ F+
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTL---CKSRRVDEALEVFE 353
Query: 165 VM------DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK--GKIAPDGDSFAIL 216
M D + I+ D + N+L+ +C + + A E +K + P+ ++ L
Sbjct: 354 QMRGKRTDDGNVIKADSIHFNTLIDGLC-KVGRLKEAEELLVRMKLEERCVPNAVTYNCL 412
Query: 217 LEGWEKEGNAAKAK-------------------TTFGEMVIRVGWS-------------- 243
++G+ + G AK T G M G +
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Query: 244 KENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIP 303
K NV+ Y + S +E+ + + + M + C P K + + + AI
Sbjct: 473 KGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIR 532
Query: 304 LWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLV 363
+ + + GG +L+ YN +IGL C+ + + +L +M G PDS+TYN +
Sbjct: 533 VVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Query: 364 RNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYM-VENHVKPLH 422
++K E +M ++ PT + A I + + A +++ M + + V P
Sbjct: 593 KHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 423 ESANALLIGICSLSRFSEVRRHAEDM 448
N L+ L F + E+M
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEM 678
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 156/375 (41%), Gaps = 33/375 (8%)
Query: 108 AWNLMVDLL-GKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVM 166
AW+++ DL+ K L P ++A+ +S R N+ ++ M
Sbjct: 278 AWDILSDLMKNKTPLEAPPFNAL--------------LSCLGRNMDISRMNDLVLK---M 320
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGD-------SFAILLEG 219
D I DVV + L++++C + + A+E FE+++GK DG+ F L++G
Sbjct: 321 DEVKIRPDVVTLGILINTLC-KSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDG 379
Query: 220 WEKEGNAAKAKTTFGEMVIRVGWSKE---NVMAYDAFLLTLLRASQIEEVLRFLKVMKDH 276
K G +A+ E+++R+ + N + Y+ + RA ++E + MK+
Sbjct: 380 LCKVGRLKEAE----ELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
Query: 277 DCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNA 336
+ P + + + + A+ + M G+ N++ Y +I C+ V+ A
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA 495
Query: 337 FRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAM 396
++M+ G PD+ Y + L + ++ + ++ + + I +
Sbjct: 496 MYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGL 555
Query: 397 LFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIY 456
D ++ E +E+ + M + KP + N L+ F V R E M + +
Sbjct: 556 FCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPT 615
Query: 457 ESTMNKLKDAFYTEG 471
+T + DA+ + G
Sbjct: 616 VTTYGAVIDAYCSVG 630
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 127/326 (38%), Gaps = 55/326 (16%)
Query: 106 PHA--WNLMVDLLGKNELFDPMWDAIRSMKQE----GVLTLRTFVSAFQSYCVAGRFNEA 159
P+A +N ++D + + + + MK++ V+T+ T V C N A
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGM---CRHHGLNMA 460
Query: 160 IMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLE 218
++ F M+ G++ +VV +L+ + CC + AM ++E+ ++ +PD + L+
Sbjct: 461 VVFFMDMEKEGVKGNVVTYMTLIHA-CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 219 GW---EKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKD 275
G ++ +A + E G +++AY+ + + E+V L M+
Sbjct: 520 GLCQVRRDHDAIRVVEKLKE-----GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEK 574
Query: 276 HDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDN 335
P + + F K D + + M G+ P + Y A+I C+ GE+D
Sbjct: 575 EGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDE 634
Query: 336 AFRLLDEMVLH--------------------GAF----------------PDSLTYNMIF 359
A +L +M LH G F P+ TYN +F
Sbjct: 635 ALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALF 694
Query: 360 KCLVRNKKVRETESFFAEMVKNEWPP 385
KCL + EMV+ P
Sbjct: 695 KCLNEKTQGETLLKLMDEMVEQSCEP 720
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 92/225 (40%), Gaps = 7/225 (3%)
Query: 141 RTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFE 200
+ + + C R ++AI + + G D++A N L+ + C++N E
Sbjct: 512 KIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG-LFCDKNNAEKVYEMLT 570
Query: 201 --EVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLL 258
E +GK PD ++ L+ + K + + +M R V Y A +
Sbjct: 571 DMEKEGK-KPDSITYNTLISFFGKHKDFESVERMMEQM--REDGLDPTVTTYGAVIDAYC 627
Query: 259 RASQIEEVLRFLKVMKDHDCF-PGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNL 317
+++E L+ K M H P + ++ F K + A+ L + M + PN+
Sbjct: 628 SVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNV 687
Query: 318 IMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCL 362
YNA+ + + +L+DEMV P+ +T ++ + L
Sbjct: 688 ETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 11/347 (3%)
Query: 91 AVKFFRW------AGRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMK-QEGVLTLRTF 143
AV F W +G L K + V +LG+ + + + QE +L +R +
Sbjct: 155 AVFLFEWLVLSSNSGAL-KLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAY 213
Query: 144 VSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK 203
+ +Y G++ +AI F+ M G +V N +L + +E++
Sbjct: 214 TTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMR 273
Query: 204 GK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQ 262
K + D + + +L +EG +AK F E+ G+ V Y+A L +A
Sbjct: 274 SKGLKFDEFTCSTVLSACAREGLLREAKEFFAELK-SCGYEPGTV-TYNALLQVFGKAGV 331
Query: 263 IEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNA 322
E L LK M+++ C + + +V+ + A + + M G+MPN I Y
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT 391
Query: 323 MIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE 382
+I G+ D A +L M G P++ TYN + L + + E +M N
Sbjct: 392 VIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNG 451
Query: 383 WPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALL 429
P + +A+ + + + ++ M +P ++ N L+
Sbjct: 452 CSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLI 498
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 136/341 (39%), Gaps = 17/341 (4%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLR-TFVSAFQSYCVAGRFNEAIMSFDVM 166
WN M+ L G + + R MK G R TF + +Y G +A + M
Sbjct: 458 TWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM 517
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGN 225
G V N+LL+++ + + ++K K P S++++L+ + K GN
Sbjct: 518 TRAGFNACVTTYNALLNALA-RKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGN 576
Query: 226 AAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFF 285
+ E I+ G + M LL + + R + K H P + F
Sbjct: 577 YLGIERI--ENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIF 634
Query: 286 TYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVL 345
L +F + N A + +++ G+ P+L+ YN+++ + GE A +L +
Sbjct: 635 NSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEK 694
Query: 346 HGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPP------TSSNCAAAIAMLFD 399
PD ++YN + K R ++E +EM + P T + A+ M +
Sbjct: 695 SQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAE 754
Query: 400 CDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSE 440
+D + M +N +P + ++ G C ++SE
Sbjct: 755 IED------VIECMAKNDCRPNELTFKMVVDGYCRAGKYSE 789
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 131/327 (40%), Gaps = 8/327 (2%)
Query: 107 HAWNLMVDLLGKNELFDPMWDAIRSMKQEG-VLTLRTFVSAFQSYCVAGRFNEAIMS-FD 164
A+ ++ + ++ D MK+ G TL T+ + GR I+ D
Sbjct: 211 RAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLD 270
Query: 165 VMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAILLEGWEKE 223
M + G++ D +++LS+ C E A EFF E+K P ++ LL+ + K
Sbjct: 271 EMRSKGLKFDEFTCSTVLSA-CAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKA 329
Query: 224 GNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLK 283
G +A + EM + + Y+ + +RA +E +++M P
Sbjct: 330 GVYTEALSVLKEM--EENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 284 FFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEM 343
+T +D + K A+ L+ +M G +PN YNA++ L + ++L +M
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 344 VLHGAFPDSLTYNMIFKCLVRNKKVRE-TESFFAEMVKNEWPPTSSNCAAAIAMLFDCDD 402
+G P+ T+N + L NK + + F EM + P I+ C
Sbjct: 448 KSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS 506
Query: 403 PEAAHEIWSYMVENHVKPLHESANALL 429
A +++ M + NALL
Sbjct: 507 EVDASKMYGEMTRAGFNACVTTYNALL 533
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 150/406 (36%), Gaps = 42/406 (10%)
Query: 106 PHA--WNLMVDLLGKNELFDPMWDAIRSMKQEG-VLTLRTFVSAFQSYCVAGRFNEAIMS 162
P+A + ++D GK D SMK+ G V T+ + R NE I
Sbjct: 384 PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKM 443
Query: 163 FDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAILLEGWE 221
M ++G + N++L+ +C + F E+K PD D+F L+ +
Sbjct: 444 LCDMKSNGCSPNRATWNTMLA-LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYG 502
Query: 222 KEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPG 281
+ G+ A +GEM R G++ V Y+A L L R + MK P
Sbjct: 503 RCGSEVDASKMYGEMT-RAGFNA-CVTTYNALLNALARKGDWRSGENVISDMKSKGFKPT 560
Query: 282 LKFFTYALDVFVKEND------------AAHAIPLWDAM------------VAG------ 311
++ L + K + P W + +AG
Sbjct: 561 ETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFT 620
Query: 312 -----GIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNK 366
G P+++++N+M+ + N D A +L+ + G PD +TYN + VR
Sbjct: 621 LFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRG 680
Query: 367 KVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESAN 426
+ + E + K++ P + I + A + S M E ++P + N
Sbjct: 681 ECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYN 740
Query: 427 ALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR 472
+ G ++ F+E+ E M E T + D + G+
Sbjct: 741 TFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGK 786
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 122/307 (39%), Gaps = 17/307 (5%)
Query: 172 EKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKT 231
+K+VV VNS++ E + FF+ VK ++ L++G + G+ +A
Sbjct: 106 KKEVVLVNSIV------EQPLTGLSRFFDSVKSELLRT--DLVSLVKGLDDSGHWERAVF 157
Query: 232 TFGEMVI--RVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYAL 289
F +V+ G K + + F+ L R SQ + L + + ++ +T L
Sbjct: 158 LFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTIL 217
Query: 290 DVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFR----LLDEMVL 345
+ + AI L++ M G P L+ YN ++ + G++ ++R +LDEM
Sbjct: 218 HAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDV---FGKMGRSWRKILGVLDEMRS 274
Query: 346 HGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEA 405
G D T + + R +RE + FFAE+ + P + A + +
Sbjct: 275 KGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTE 334
Query: 406 AHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKD 465
A + M EN + N L+ E E M + ++ T + D
Sbjct: 335 ALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVID 394
Query: 466 AFYTEGR 472
A+ G+
Sbjct: 395 AYGKAGK 401
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 141/346 (40%), Gaps = 23/346 (6%)
Query: 138 LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAME 197
L + +F + +C + + ++ +F + G + DVV N+LL +C E+ + S A+
Sbjct: 139 LNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED-RISEALA 197
Query: 198 FF----------------EEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVG 241
F + V+ + P +F L+ G EG +A +MV +
Sbjct: 198 LFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK-- 255
Query: 242 WSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHA 301
+V+ Y + + + + L L M++ P + ++ +D K+ + A
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 302 IPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKC 361
L+ M+ GI PN+ YN MI C+ G +A RLL +M+ PD LT+N +
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 362 LVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPL 421
V+ K+ E E EM+ P + + I + + A ++ M V
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTF 435
Query: 422 HESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAF 467
N ++ C R E + ++ R ++ +T N L F
Sbjct: 436 ----NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 22/261 (8%)
Query: 212 SFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLK 271
SF IL++ + + + +TFG++ ++G+ + +V+ ++ L L +I E L
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLT-KLGF-QPDVVTFNTLLHGLCLEDRISEAL---- 196
Query: 272 VMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNG 331
AL ++ E A+ L+D MV G+ P +I +N +I C G
Sbjct: 197 ----------------ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEG 240
Query: 332 EVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCA 391
V A L+++MV G D +TY I + + + + ++M + P +
Sbjct: 241 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 300
Query: 392 AAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDR 451
A I L A ++S M+E + P + N ++ G CS R+S+ +R DM++R
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Query: 452 RIIIYESTMNKLKDAFYTEGR 472
I T N L A EG+
Sbjct: 361 EINPDVLTFNALISASVKEGK 381
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/299 (19%), Positives = 128/299 (42%), Gaps = 6/299 (2%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
T+ + C G A+ M+ I+ DVV ++++ +C + + + F E
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 202 VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRAS 261
++ IAP+ ++ +++G+ G + A+ +M+ R +V+ ++A + ++
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER--EINPDVLTFNALISASVKEG 380
Query: 262 QIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYN 321
++ E + M FP + + F K N A ++D M + P+++ +N
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFN 436
Query: 322 AMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKN 381
+I + C VD +LL E+ G ++ TYN + + + F EM+ +
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Query: 382 EWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSE 440
P + C + + + E A E++ + + + + N ++ G+C S+ E
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 7/252 (2%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMD 167
+N M+ K+ FD M V+T T + YC A R +E + +
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDV---YCRAKRVDEGMQLLREIS 459
Query: 168 NHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNA 226
G+ + N+L+ C E + + A + F+E + + PD + ILL G+ +
Sbjct: 460 RRGLVANTTTYNTLIHGFC-EVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 227 AKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFT 286
+A F VI++ + +AY+ + + + S+++E + H P ++ +
Sbjct: 519 EEALELFE--VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 576
Query: 287 YALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLH 346
+ F ++ + A L+ M G P+ YN +I GE+D + L+ EM +
Sbjct: 577 VMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN 636
Query: 347 GAFPDSLTYNMI 358
G D+ T M+
Sbjct: 637 GFSGDAFTIKMV 648
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/389 (19%), Positives = 145/389 (37%), Gaps = 18/389 (4%)
Query: 36 HLDTPNVSPVARTLCNLLTRTSPPEIETALTSSGIHPSDDCVREVL-KLSYNYPHSAVKF 94
H+D + +C + S + + + + I P ++ +L + HS ++
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 95 FRWAGRLQKH-SPHA--WNLMVDLLGKNELFDPMWDAIRSMKQE----GVLTLRTFVSAF 147
++ L+K +P+ +N M+D + +R M + VLT +SA
Sbjct: 318 L-FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 376
Query: 148 QSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIA 207
G+ EA D M + I D V NS++ C + N+ A F+ + +
Sbjct: 377 VK---EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC-KHNRFDDAKHMFDLMA---S 429
Query: 208 PDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVL 267
PD +F +++ + + + E + R G N Y+ + +
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLRE-ISRRGLVA-NTTTYNTLIHGFCEVDNLNAAQ 487
Query: 268 RFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQ 327
+ M H P L F + A+ L++ + I + + YN +I
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547
Query: 328 CNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTS 387
C +VD A+ L + +HG PD TYN++ + + F +M N P +
Sbjct: 548 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 607
Query: 388 SNCAAAIAMLFDCDDPEAAHEIWSYMVEN 416
S I + + + E+ S M N
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISEMRSN 636
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 151/394 (38%), Gaps = 40/394 (10%)
Query: 59 PEIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGRLQ--KHSPHAWNLMVDLL 116
P+ E AL + VR +L++ + ++FF+WAG+ + +H + ++ L
Sbjct: 78 PDAEKALEVLKLKVDHRLVRSILEIDVEI-NVKIQFFKWAGKRRNFQHDCSTYMTLIRCL 136
Query: 117 GKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVV 176
+ L+ M+ I+ + + T+VS
Sbjct: 137 EEARLYGEMYRTIQEVVR------NTYVSVSP---------------------------- 162
Query: 177 AVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAILLEGWEKEGNAAKAKTTFGE 235
AV S L S A+ F + KG K P ++ ++ +EG K + E
Sbjct: 163 AVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTE 222
Query: 236 MVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKE 295
M G + + Y A + + + + + +R MKD+ P K +T L ++ K
Sbjct: 223 MC-NEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKV 281
Query: 296 NDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTY 355
A+ L++ M G P + Y +I G VD A+ +M+ G PD +
Sbjct: 282 GKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFL 341
Query: 356 NMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIW-SYMV 414
N + L + +V E + F+EM PT + I LF+ + W M
Sbjct: 342 NNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMK 401
Query: 415 ENHVKPLHESANALLIGICSLSRFSEVRRHAEDM 448
+ V P + + L+ G C +R + E+M
Sbjct: 402 ADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEM 435
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 104/219 (47%), Gaps = 4/219 (1%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
T+ YC R +A++ + MD G A SL++++ + + A E F+E
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALG-KAKRYEAANELFKE 469
Query: 202 VKGKIAP-DGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
+K +A++++ + K G ++A F EM + S +V AY+A + +++A
Sbjct: 470 LKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEM--KNQGSGPDVYAYNALMSGMVKA 527
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
I E L+ M+++ C + L+ F + AI +++ + GI P+ + Y
Sbjct: 528 GMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTY 587
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIF 359
N ++G + G + A R++ EM G D++TY+ I
Sbjct: 588 NTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 85/433 (19%), Positives = 160/433 (36%), Gaps = 79/433 (18%)
Query: 94 FFRWAGRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEG-----VLTLRTFVSAFQ 148
F++ GR K + +N ++ +L + + + + M EG +T +S+++
Sbjct: 185 FYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYE 244
Query: 149 SYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK-GKIA 207
GR + AI FD M ++ ++ +LL I + + A++ FEE+K +
Sbjct: 245 KL---GRNDSAIRLFDEMKDNCMQPTEKIYTTLLG-IYFKVGKVEKALDLFEEMKRAGCS 300
Query: 208 PDGDSFAILLEGWEKEGNAAKAKTTFGEMVI------------------RVGWSKE---- 245
P ++ L++G K G +A + +M+ +VG +E
Sbjct: 301 PTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNV 360
Query: 246 -----------NVMAYDAFLLTLLRA-SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFV 293
V++Y+ + L + + + EV + MK P ++ +D +
Sbjct: 361 FSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYC 420
Query: 294 KENDAAHAIPLWDAMVAGGIMP------NLI----------------------------- 318
K N A+ L + M G P +LI
Sbjct: 421 KTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSR 480
Query: 319 MYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEM 378
+Y MI G++ A L +EM G+ PD YN + +V+ + E S +M
Sbjct: 481 VYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKM 540
Query: 379 VKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRF 438
+N ++ + P A E++ + + +KP + N LL F
Sbjct: 541 EENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMF 600
Query: 439 SEVRRHAEDMLDR 451
E R +M D+
Sbjct: 601 EEAARMMREMKDK 613
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 106/474 (22%), Positives = 190/474 (40%), Gaps = 41/474 (8%)
Query: 30 PNEFPTHLDTPNV--SPVARTLCNLLTRTSPPE------------IETALTSSGIHPSDD 75
PN + L +P++ P + LT S E +E L S+ +
Sbjct: 2 PNSLISRLVSPSLRSQPSKISALRFLTTVSAAERLYGQLQGCTSNLEKELASANVQLDSS 61
Query: 76 CVREVLK-LSYNYPHSAVKFFRWAGRL--QKHSPHAWNLMVDLL---GKNELFDPMWDAI 129
C+ EVL+ N S ++FF WAG L +HS + + D+L K +L + ++
Sbjct: 62 CINEVLRRCDPNQFQSGLRFFIWAGTLSSHRHSAYMYTKACDILKIRAKPDLIKYVIESY 121
Query: 130 RSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEE 189
R K+E + ++T A +EA+ + D VA N L+ + ++
Sbjct: 122 R--KEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYN-LVIRLFADK 178
Query: 190 NQTSTAMEFFEEVKG-KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKE--- 245
+ A +E+ + PD ++ ++ G+ G A EM SK
Sbjct: 179 GDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEM------SKHDCV 232
Query: 246 -NVMAYDAFLLTLLRASQIEEVLRFLKVMKDHD----CFPGLKFFTYALDVFVKENDAAH 300
N + Y L + ++ +E L L M+ D P +T + F ++
Sbjct: 233 LNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEE 292
Query: 301 AIPLWDAMVAGGIMPNLIMYNAMI-GLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIF 359
A+ + D M G MPN + +I G+ N+ +V +L+D++V G S ++
Sbjct: 293 ALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSAT 352
Query: 360 KCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVK 419
L+R K+ E E F M+ P C+ L + ++ + + VK
Sbjct: 353 VSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVK 412
Query: 420 PLHESA--NALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEG 471
+S LL+G+C E + A+ MLD+++ + S + K+ +A G
Sbjct: 413 STIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTG 466
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 133/315 (42%), Gaps = 39/315 (12%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
T + C GR +EA+ + +++ G + DVVA N+L+ C + A FF E
Sbjct: 285 TVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCAL-GKMRVAQRFFIE 343
Query: 202 VKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
++ K P+ +++ +L+ G+ G A TF +M + + N ++ + L
Sbjct: 344 MERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDM--KTDAIRWNFATFNTLIRGLSIG 401
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDV--FVKENDAAHAIPL-------------- 304
+ ++ L+ L++M+D D G + Y + F KEN A+
Sbjct: 402 GRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDR 461
Query: 305 -------------------WDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVL 345
+D M+ G +P++I+ + +I +G+++ + L+++MV
Sbjct: 462 SFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVT 521
Query: 346 HGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEA 405
G P S T+N + + KV F +M + P + + + L D +
Sbjct: 522 RGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQK 581
Query: 406 AHEIWSYMVENHVKP 420
A ++S MVE + P
Sbjct: 582 AWLLFSRMVEKSIVP 596
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 148/385 (38%), Gaps = 15/385 (3%)
Query: 72 PSDDCVREVLKLSYNYPHSAVKFFRWAGRLQK--HSPHAWNLMVDLLGKNELFDPMWDAI 129
PSDD + ++ L A++ FRWA HS + + L FD ++ +
Sbjct: 41 PSDDHIVRLI-LDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLL 99
Query: 130 RSMKQEGVLTL--RTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICC 187
M L FV+ + + A I D++ GI+ + NS+L +
Sbjct: 100 DEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVK 159
Query: 188 EENQTSTAMEFFEE--VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKE 245
E+ A EFF + I D ++ IL++G +++
Sbjct: 160 ED--IDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLL--QIMKTSGVAP 215
Query: 246 NVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLW 305
N + Y+ L L + ++ + MK+ P F + + E ++ L
Sbjct: 216 NAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLL 271
Query: 306 DAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRN 365
+ + G +P+++ ++ + CN G V A +L+ + G D + N + K
Sbjct: 272 EKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCAL 331
Query: 366 KKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESA 425
K+R + FF EM + + P IA D ++A + ++ M + ++ +
Sbjct: 332 GKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATF 391
Query: 426 NALLIGICSLSRFSEVRRHAEDMLD 450
N L+ G+ R + + E M D
Sbjct: 392 NTLIRGLSIGGRTDDGLKILEMMQD 416
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 134/346 (38%), Gaps = 16/346 (4%)
Query: 38 DTPNVSPVARTLCNLLTRTSPPEIETALTSSGIHPSDDCVREVLK--LSYNYPHSAVKFF 95
D V+ V LCN + E+ + S G ++K + A +FF
Sbjct: 282 DVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFF 341
Query: 96 RWAGRLQKHSPHA--WNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCV 152
R + + P+ +NL++ + D D MK + + TF + + +
Sbjct: 342 IEMER-KGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSI 400
Query: 153 AGRFNEAIMSFDVMDN----HGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAP 208
GR ++ + ++M + HG D N ++ +EN+ A+EF +++ K+ P
Sbjct: 401 GGRTDDGLKILEMMQDSDTVHGARID--PYNCVIYGFY-KENRWEDALEFLLKME-KLFP 456
Query: 209 DGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLR 268
+ L ++G KT + +M+ G +++ + + +IEE L
Sbjct: 457 RAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVP--SIIVSHCLIHRYSQHGKIEESLE 514
Query: 269 FLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQC 328
+ M P F + F K++ + I + M G +P+ YN ++ C
Sbjct: 515 LINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELC 574
Query: 329 NNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESF 374
G++ A+ L MV PD ++ + CL + + S
Sbjct: 575 VKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNSSL 620
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 169/409 (41%), Gaps = 52/409 (12%)
Query: 32 EFPTHLDTPNVSPVARTLCNLLTRTSPPEIETALTSSGIHPSDDCVREVLKLSYNYPHSA 91
EFP PN SP+ TS E E H D V EVL N P SA
Sbjct: 54 EFPHKTSVPNHSPL----------TSTSETEN-------HVDDARVIEVLLGRRNDPVSA 96
Query: 92 VKFFRWAGRLQK----------------HSPH----AWNLMVDLLGKNELFDP---MWDA 128
+++ W L + S H A NL+V + N P + +
Sbjct: 97 LQYCNWVKPLHRLCEGGDVFWVLIHILLSSIHTHDRASNLLVMFVSNNPTLIPNVMVNNL 156
Query: 129 IRSMKQEGV-LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICC 187
+ S K+ G LT R F +Y R + A+ F +M + + V VN++LSS+
Sbjct: 157 VDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLV- 215
Query: 188 EENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKEN 246
N A E + + V +A D + +L+ +E +A F ++ R G +
Sbjct: 216 RSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSR-GAEPDG 274
Query: 247 VMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGL----KFFTYALDVFVKENDAAHAI 302
++ F L + A + +++ L ++++ G+ + +T + FVKE + A+
Sbjct: 275 LL----FSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAV 330
Query: 303 PLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCL 362
+ D MV GI ++I +++ C E+ A L + M G PD + ++++ +
Sbjct: 331 RVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWF 390
Query: 363 VRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWS 411
+N ++ + F+ M P+S I + PEAA EI++
Sbjct: 391 CKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFN 439
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 166/390 (42%), Gaps = 46/390 (11%)
Query: 88 PHSAVKFFRWA-GRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQE-GV-LTLRTFV 144
P AVK FR R + ++L V K D +R M+ + GV + T+
Sbjct: 255 PEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYT 314
Query: 145 SAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG 204
S ++ G EA+ D M GI V+A SL++ C + N+ A++ F ++
Sbjct: 315 SVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYC-KGNELGKALDLFNRMEE 373
Query: 205 K-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEM-VIRVGWSKENVMAYDAFLLTLLRASQ 262
+ +APD F++++E + K KA + M +R+ S +V+ + + L+A
Sbjct: 374 EGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPS--SVLVH-TMIQGCLKAES 430
Query: 263 IEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNA 322
E AL++F ND+ +++ +A G M N I
Sbjct: 431 PEA----------------------ALEIF---NDS------FESWIAHGFMCNKIFL-- 457
Query: 323 MIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE 382
L C G+VD A L M G P+ + YN + R K + S F+EM++
Sbjct: 458 ---LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKG 514
Query: 383 WPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVR 442
P + + I F D + A ++ + M ++ + N ++ G+C + + S+ +
Sbjct: 515 LEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAK 574
Query: 443 RHAEDML-DRRIIIYESTMNKLKDAFYTEG 471
++++ ++R + ++ N + D F G
Sbjct: 575 EMLQNLIKEKRYSMSCTSYNSIIDGFVKVG 604
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 104/216 (48%), Gaps = 5/216 (2%)
Query: 166 MDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV--KGKIAPDGDSFAILLEGWEKE 223
M+ E + V N++++ +C + QTS A E + + + + + S+ +++G+ K
Sbjct: 545 MNASNFEANEVIYNTIINGLC-KVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKV 603
Query: 224 GNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLK 283
G+ A T+ EM NV+ + + + ++++++ L MK + L
Sbjct: 604 GDTDSAVETYREM--SENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLP 661
Query: 284 FFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEM 343
+ +D F K+ND A L+ + G+MPN+ +YN++I N G++D A L +M
Sbjct: 662 AYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKM 721
Query: 344 VLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMV 379
V G D TY + L+++ + ++E++
Sbjct: 722 VNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELL 757
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 106/253 (41%), Gaps = 5/253 (1%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEG-VLTLRTFVSAFQSYCVAGRFNEAIMSFDVM 166
++N ++D K D + R M + G + TF S +C + R + A+ M
Sbjct: 592 SYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM 651
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-KGKIAPDGDSFAILLEGWEKEGN 225
+ ++ D+ A +L+ C++N TA F E+ + + P+ + L+ G+ G
Sbjct: 652 KSMELKLDLPAYGALIDGF-CKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGK 710
Query: 226 AAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFF 285
A + +MV G S + + Y + LL+ I + D P
Sbjct: 711 MDAAIDLYKKMV-NDGISCD-LFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILH 768
Query: 286 TYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVL 345
++ K+ A + + M + PN+++Y+ +I G ++ AFRL DEM+
Sbjct: 769 MVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLE 828
Query: 346 HGAFPDSLTYNMI 358
G D +N++
Sbjct: 829 KGIVHDDTVFNLL 841
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 137/338 (40%), Gaps = 55/338 (16%)
Query: 155 RFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK--IAPDGDS 212
RF + + + N G D N +L + + + A+ FF +K + DG +
Sbjct: 306 RFKWGHAAEEALHNFGFRMDAYQANQVLKQM----DNYANALGFFYWLKRQPGFKHDGHT 361
Query: 213 FAILLEGWEKEGNAAKAKTTFGEM------VIRVGWSKENVMAYDAFLLTLLRASQIEEV 266
+ ++ GN +AK FGE+ ++R G K N + Y+ + + RA+ ++E
Sbjct: 362 YTTMV------GNLGRAKQ-FGEINKLLDEMVRDG-CKPNTVTYNRLIHSYGRANYLKEA 413
Query: 267 LRFLKVMKDHDCFPG-------------LKFFTYALDVFVKENDA--------------- 298
+ M++ C P F A+D++ + +A
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 299 ---AHAIP----LWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPD 351
A +P L+ MV G PNL+ +N MI L + A +L +M G PD
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 352 SLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWS 411
+TY+++ + L + E E FAEM + W P + + + + A + +
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQ 593
Query: 412 YMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDML 449
M++ ++P + N+LL + R SE + ML
Sbjct: 594 AMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSML 631
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 146/356 (41%), Gaps = 19/356 (5%)
Query: 39 TPNVSPVARTLCN----------LLTRTS-PPEIETALTSSGIHPSDDCVREVLKLSYNY 87
TP +P R CN +L R E AL + G +VLK NY
Sbjct: 280 TPRTAPTPRQHCNPGYVVENVSSILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQMDNY 339
Query: 88 PHSAVKFFRWAGRLQ--KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFV 144
+ A+ FF W R KH H + MV LG+ + F + + M ++G T+
Sbjct: 340 AN-ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYN 398
Query: 145 SAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK- 203
SY A EA+ F+ M G E D V +L+ I + AM+ ++ ++
Sbjct: 399 RLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLI-DIHAKAGFLDIAMDMYQRMQE 457
Query: 204 GKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQI 263
++PD ++++++ K G+ A F EMV + N++ ++ + +A
Sbjct: 458 AGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQ--GCTPNLVTFNIMIALHAKARNY 515
Query: 264 EEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAM 323
E L+ + M++ P ++ ++V A ++ M +P+ +Y +
Sbjct: 516 ETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLL 575
Query: 324 IGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMV 379
+ L G VD A++ M+ G P+ T N + +R ++ E + M+
Sbjct: 576 VDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSML 631
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 105/218 (48%), Gaps = 4/218 (1%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
+++S +S C AG+ EAI + G+ D + N++ S++ + Q S + FE+
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALG-KLKQISHIHDLFEK 467
Query: 202 VKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
+K +PD ++ IL+ + + G +A F E+ K ++++Y++ + L +
Sbjct: 468 MKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEEL--ERSDCKPDIISYNSLINCLGKN 525
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
++E K M++ P + ++ ++ F K A L++ M+ G PN++ Y
Sbjct: 526 GDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTY 585
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMI 358
N ++ NG A L +M G PDS+TY ++
Sbjct: 586 NILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 142/358 (39%), Gaps = 44/358 (12%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMD 167
A+N+++D L K+E +++ ++ K+ T+ ++ G+ +EA+ F+ M
Sbjct: 240 AYNMLLDALAKDEKACQVFEDMK--KRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMI 297
Query: 168 NHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILL-----EG-- 219
G+ +VV N+L+ + + A++ F V+ P+ ++++LL EG
Sbjct: 298 TEGLTLNVVGYNTLMQ-VLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQL 356
Query: 220 -------------------------WEKEGNAAKAKTTFGEMVIRVGWS---KENVMAYD 251
K G+ ++A F +M WS K +Y
Sbjct: 357 VRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDM-----WSFPVKGERDSYM 411
Query: 252 AFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAG 311
+ L +L A + E + L + + + K +H L++ M
Sbjct: 412 SMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKD 471
Query: 312 GIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRET 371
G P++ YN +I GEVD A + +E+ PD ++YN + CL +N V E
Sbjct: 472 GPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEA 531
Query: 372 ESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALL 429
F EM + P + + + E A+ ++ M+ +P + N LL
Sbjct: 532 HVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILL 589
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 119/292 (40%), Gaps = 43/292 (14%)
Query: 75 DCVREVLKLSYNYPHSAVKFFRWAGRLQKHS---PHAWNLMVDLLGKNELFDPMWDAIRS 131
D E+LK S N P AV+FF+ L +S P +N ++ +L ++ L D +D +RS
Sbjct: 100 DEASEILK-SLNSPLLAVEFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPD-RFDRVRS 157
Query: 132 MKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQ 191
+ D M + ++ VN L+ N
Sbjct: 158 I------------------------------LDSMVKSNVHGNISTVNILIGFF---GNT 184
Query: 192 TSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYD 251
M K + + ++ LL+ + + + +KA + E IR G K ++ AY+
Sbjct: 185 EDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCE--IRRGGHKLDIFAYN 242
Query: 252 AFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAG 311
L L ++ E+ + + MK C +T + + A+ L++ M+
Sbjct: 243 MLLDAL---AKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITE 299
Query: 312 GIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLV 363
G+ N++ YN ++ + VD A ++ MV G P+ TY+++ LV
Sbjct: 300 GLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLV 351
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 148/356 (41%), Gaps = 48/356 (13%)
Query: 109 WNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMD 167
+N+ D L K + ++ ++ MK G++ + + + YC+ G+ +A+ D M
Sbjct: 391 YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 168 NHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGW------ 220
+G+ D++ N L+S + +E +E +K + P+ + ++++EG
Sbjct: 451 GNGMSPDLITYNVLVSGLA-RNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKV 509
Query: 221 --------EKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFL---------------LTL 257
E + K +F + G SK+ AY AF+ +L
Sbjct: 510 KEAEDFFSSLEQKCPENKASFVKGYCEAGLSKK---AYKAFVRLEYPLRKSVYIKLFFSL 566
Query: 258 LRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNL 317
+E+ LK M + PG + F K N+ A L+D MV G++P+L
Sbjct: 567 CIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDL 626
Query: 318 IMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIF-KCLVRNKKVRETESFFA 376
Y MI C E+ A L ++M G PD +TY ++ + L + + ET S
Sbjct: 627 FTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQG 686
Query: 377 EMVKNEWPPTSSN-CAAAIAMLFDC-----------DDPEAAHEIWSYMVENHVKP 420
E+ K + AA I + C ++ E A E++ M+++ ++P
Sbjct: 687 EVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEP 742
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 137/324 (42%), Gaps = 44/324 (13%)
Query: 166 MDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEG 224
M+ G DV A +++ C N A+ F +++ GK + + +++L+ + K
Sbjct: 309 MEEIGFGLDVYACLAVIDRYCKNMN-LPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMD 367
Query: 225 NAAKAKTTFGE---MVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPG 281
+A F E M I + NV A+DA L + ++EE L+ MKD P
Sbjct: 368 MCLEALEKFKEFRDMNIFLDRVCYNV-AFDA----LSKLGRVEEAFELLQEMKDRGIVPD 422
Query: 282 LKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLD 341
+ +T +D + + A+ L D M+ G+ P+LI YN ++ NG + + +
Sbjct: 423 VINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYE 482
Query: 342 EMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEM----------------------- 378
M G P+++T ++I + L +KV+E E FF+ +
Sbjct: 483 RMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKK 542
Query: 379 -----VKNEWPPTSSNCAAAIAMLFD-CDDP--EAAHEIWSYMVENHVKPLHESANALLI 430
V+ E+P S I + F C + E AH++ M V+P ++
Sbjct: 543 AYKAFVRLEYPLRKS---VYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIG 599
Query: 431 GICSLSRFSEVRRHAEDMLDRRII 454
C L+ E + + M++R +I
Sbjct: 600 AFCKLNNVREAQVLFDTMVERGLI 623
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 118/323 (36%), Gaps = 18/323 (5%)
Query: 130 RSMKQEGVLTLR-TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCE 188
+ +KQ G+ T+ ++ C G EA M +++N + +N L C
Sbjct: 205 KQLKQLGLCANEYTYAIVVKALCRKGNLEEAAML--LIENESVFGYKTFINGL-----CV 257
Query: 189 ENQTSTAMEFFEEVKGKIAPDGDSF----AILLEGWEKEGNAAKAKTTFGEMVIRVGWSK 244
+T A+ E+ + GD +++ G+ E A++ EM +G+
Sbjct: 258 TGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEME-EIGFGL 316
Query: 245 ENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPL 304
+V A A + + + E L FL M + L + K + A+
Sbjct: 317 -DVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEK 375
Query: 305 WDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVR 364
+ I + + YN G V+ AF LL EM G PD + Y +
Sbjct: 376 FKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCL 435
Query: 365 NKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHES 424
KV + EM+ N P ++ L E EI+ M KP +
Sbjct: 436 QGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVT 495
Query: 425 ANALLIGICSLSRFSEVRRHAED 447
+ ++ G+C F+ + AED
Sbjct: 496 NSVIIEGLC----FARKVKEAED 514
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 38/286 (13%)
Query: 153 AGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGD 211
+G + EA+ M ++G+ D+V N +LS+ Q S A+ +FE +KG K+ PD
Sbjct: 226 SGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYK-SGRQYSKALSYFELMKGAKVRPDTT 284
Query: 212 SFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLK 271
+F I++ K G +++A F M +E
Sbjct: 285 TFNIIIYCLSKLGQSSQALDLFNSM-------RE-------------------------- 311
Query: 272 VMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNG 331
K +C P + FT + ++ + + + +++AMVA G+ PN++ YNA++G +G
Sbjct: 312 --KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG 369
Query: 332 EVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCA 391
A +L ++ +G PD ++Y + R+++ + + F M K P
Sbjct: 370 MSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN 429
Query: 392 AAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSR 437
A I A EI+ M ++ +KP S LL CS S+
Sbjct: 430 ALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL-AACSRSK 474
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 131/326 (40%), Gaps = 10/326 (3%)
Query: 60 EIETALTSSGIHP---SDDCVREVLKLSYNYPHSAVKFFRWAGRLQKHSPHAWNLMV--- 113
E+ +T +G+ P + + V K Y + F G + +N+++
Sbjct: 234 EVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCL 293
Query: 114 DLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEK 173
LG++ +++++R + E + TF S Y V G F+ M G++
Sbjct: 294 SKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKP 353
Query: 174 DVVAVNSLLSSICCEENQTSTAMEFFEEVK-GKIAPDGDSFAILLEGWEKEGNAAKAKTT 232
++V+ N+L+ + + TA+ ++K I PD S+ LL + + KAK
Sbjct: 354 NIVSYNALMGAYAVH-GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 412
Query: 233 FGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVF 292
F +++R K NV+ Y+A + + E + + M+ P + L
Sbjct: 413 F--LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 470
Query: 293 VKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDS 352
+ + + A + GI N YN+ IG N E++ A L M DS
Sbjct: 471 SRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS 530
Query: 353 LTYNMIFKCLVRNKKVRETESFFAEM 378
+T+ ++ R K E S+ EM
Sbjct: 531 VTFTILISGSCRMSKYPEAISYLKEM 556
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 100/249 (40%), Gaps = 9/249 (3%)
Query: 100 RLQKHSPH--AWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFN 157
R ++ P+ +N ++D G N + R M+Q+G+ V + C +
Sbjct: 417 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKK 476
Query: 158 EAIMS-FDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-KGKIAPDGDSFAI 215
+ + + GI + A NS + S + A+ ++ + K K+ D +F I
Sbjct: 477 VNVDTVLSAAQSRGINLNTAAYNSAIGSYI-NAAELEKAIALYQSMRKKKVKADSVTFTI 535
Query: 216 LLEGWEKEGNAAKAKTTFGEMV-IRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMK 274
L+ G + +A + EM + + +KE Y + L + Q+ E MK
Sbjct: 536 LISGSCRMSKYPEAISYLKEMEDLSIPLTKE---VYSSVLCAYSKQGQVTEAESIFNQMK 592
Query: 275 DHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVD 334
C P + +T L + A L+ M A GI P+ I +A++ G+
Sbjct: 593 MAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPS 652
Query: 335 NAFRLLDEM 343
N F L+D M
Sbjct: 653 NVFVLMDLM 661
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 99/236 (41%), Gaps = 6/236 (2%)
Query: 147 FQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGK 205
C GR EA D M G + L+ ++C + A F+E +
Sbjct: 273 IHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALC-DRGLIDKAFNLFDEMIPRG 331
Query: 206 IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVI-RVGWSKENVMAYDAFLLTLLRASQIE 264
P+ ++ +L++G ++G +A +MV R+ S V+ Y+A + + ++
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPS---VITYNALINGYCKDGRVV 388
Query: 265 EVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMI 324
L VM+ C P ++ F ++ + A+ L M+ G+ P+++ YN +I
Sbjct: 389 PAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLI 448
Query: 325 GLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
C G ++ A++LL M PD LT+ I + K +F M++
Sbjct: 449 DGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 158/373 (42%), Gaps = 29/373 (7%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMK----QEGVLTLRTFVSAFQSYCVAGRFNEAIMSF 163
++N+++D L + + + + SM + LT ++AF C G+ + A
Sbjct: 443 SYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAF---CKQGKADVASAFL 499
Query: 164 DVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEK 222
+M GI D V +L+ +C + +T A+ E VK +I S ++L+ K
Sbjct: 500 GLMLRKGISLDEVTGTTLIDGVC-KVGKTRDALFILETLVKMRILTTPHSLNVILDMLSK 558
Query: 223 EGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGL 282
+ G+ + ++G +V+ Y + L+R+ I R L++MK C P +
Sbjct: 559 GCKVKEELAMLGK-INKLGLVP-SVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNV 616
Query: 283 KFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDE 342
+T ++ + A L AM G+ PN + Y M+ NNG++D A +
Sbjct: 617 YPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA 676
Query: 343 MVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDD 402
MV G + Y+ + + V ++K + N T S+ A D
Sbjct: 677 MVERGYELNDRIYSSLLQGFVLSQK----------GIDNSEESTVSDIALRET------D 720
Query: 403 PEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNK 462
PE +E+ S +VE + L+ +C R E +++L+R + + E M+
Sbjct: 721 PECINELIS-VVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFL-EKAMDI 778
Query: 463 LKDAFYTEGRSRK 475
+ +++ ++ + K
Sbjct: 779 IMESYCSKKKHTK 791
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 111/277 (40%), Gaps = 5/277 (1%)
Query: 159 AIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSF--AIL 216
A +++ M+ G ++ ++++++C +N + A E F KI DS L
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALC--KNGYTEAAEMFMSKILKIGFVLDSHIGTSL 236
Query: 217 LEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDH 276
L G+ + N A F M V + N ++Y + L ++EE M +
Sbjct: 237 LLGFCRGLNLRDALKVFDVMSKEVTCAP-NSVSYSILIHGLCEVGRLEEAFGLKDQMGEK 295
Query: 277 DCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNA 336
C P + +T + A L+D M+ G PN+ Y +I C +G+++ A
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 337 FRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAM 396
+ +MV FP +TYN + ++ +V M K P +
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 397 LFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGIC 433
L P A + M++N + P S N L+ G+C
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLC 452
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 135/370 (36%), Gaps = 5/370 (1%)
Query: 105 SPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSF 163
S + +++ L L D ++ M G + T+ C G+ EA
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
Query: 164 DVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-KGKIAPDGDSFAILLEGWEK 222
M I V+ N+L++ C ++ + A E + K P+ +F L+EG +
Sbjct: 360 RKMVKDRIFPSVITYNALINGYC-KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 223 EGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGL 282
G KA M+ G S + +++Y+ + L R + + L M D P
Sbjct: 419 VGKPYKAVHLLKRMLDN-GLSPD-IVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDC 476
Query: 283 KFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDE 342
FT ++ F K+ A A M+ GI + + +I C G+ +A +L+
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILET 536
Query: 343 MVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDD 402
+V + N+I L + KV+E + ++ K P+ + L D
Sbjct: 537 LVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGD 596
Query: 403 PEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNK 462
+ I M + P ++ G+C R E + M D + T
Sbjct: 597 ITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTV 656
Query: 463 LKDAFYTEGR 472
+ + G+
Sbjct: 657 MVKGYVNNGK 666
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%)
Query: 315 PNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESF 374
PN + Y+ +I C G ++ AF L D+M G P + TY ++ K L + + +
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 375 FAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICS 434
F EM+ P I L E A+ + MV++ + P + NAL+ G C
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 435 LSR 437
R
Sbjct: 384 DGR 386
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 38/286 (13%)
Query: 153 AGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGD 211
+G + EA+ M ++G+ D+V N +LS+ Q S A+ +FE +KG K+ PD
Sbjct: 94 SGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYK-SGRQYSKALSYFELMKGAKVRPDTT 152
Query: 212 SFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLK 271
+F I++ K G +++A F M +E
Sbjct: 153 TFNIIIYCLSKLGQSSQALDLFNSM-------RE-------------------------- 179
Query: 272 VMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNG 331
K +C P + FT + ++ + + + +++AMVA G+ PN++ YNA++G +G
Sbjct: 180 --KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG 237
Query: 332 EVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCA 391
A +L ++ +G PD ++Y + R+++ + + F M K P
Sbjct: 238 MSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN 297
Query: 392 AAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSR 437
A I A EI+ M ++ +KP S LL CS S+
Sbjct: 298 ALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL-AACSRSK 342
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 133/334 (39%), Gaps = 10/334 (2%)
Query: 60 EIETALTSSGIHP---SDDCVREVLKLSYNYPHSAVKFFRWAGRLQKHSPHAWNLMV--- 113
E+ +T +G+ P + + V K Y + F G + +N+++
Sbjct: 102 EVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCL 161
Query: 114 DLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEK 173
LG++ +++++R + E + TF S Y V G F+ M G++
Sbjct: 162 SKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKP 221
Query: 174 DVVAVNSLLSSICCEENQTSTAMEFFEEVK-GKIAPDGDSFAILLEGWEKEGNAAKAKTT 232
++V+ N+L+ + + TA+ ++K I PD S+ LL + + KAK
Sbjct: 222 NIVSYNALMGAYAVH-GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 280
Query: 233 FGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVF 292
F +++R K NV+ Y+A + + E + + M+ P + L
Sbjct: 281 F--LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 338
Query: 293 VKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDS 352
+ + + A + GI N YN+ IG N E++ A L M DS
Sbjct: 339 SRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS 398
Query: 353 LTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPT 386
+T+ ++ R K E S+ EM P T
Sbjct: 399 VTFTILISGSCRMSKYPEAISYLKEMEDLSIPLT 432
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 100/249 (40%), Gaps = 9/249 (3%)
Query: 100 RLQKHSPH--AWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFN 157
R ++ P+ +N ++D G N + R M+Q+G+ V + C +
Sbjct: 285 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKK 344
Query: 158 EAIMS-FDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-KGKIAPDGDSFAI 215
+ + + GI + A NS + S + A+ ++ + K K+ D +F I
Sbjct: 345 VNVDTVLSAAQSRGINLNTAAYNSAIGSYI-NAAELEKAIALYQSMRKKKVKADSVTFTI 403
Query: 216 LLEGWEKEGNAAKAKTTFGEMV-IRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMK 274
L+ G + +A + EM + + +KE Y + L + Q+ E MK
Sbjct: 404 LISGSCRMSKYPEAISYLKEMEDLSIPLTKE---VYSSVLCAYSKQGQVTEAESIFNQMK 460
Query: 275 DHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVD 334
C P + +T L + A L+ M A GI P+ I +A++ G+
Sbjct: 461 MAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPS 520
Query: 335 NAFRLLDEM 343
N F L+D M
Sbjct: 521 NVFVLMDLM 529
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 134/347 (38%), Gaps = 40/347 (11%)
Query: 107 HAWNLMVDLLGKNELFDPMWDAIRSMKQEG----VLTLRTFVSAFQSYCVAGRFNEAIMS 162
+ +N++ ++ + F + D + M++EG ++T T VS SYC GR EA
Sbjct: 237 YTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVS---SYCRRGRLKEAFYL 293
Query: 163 FDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEK 222
+ +M + D+V SL+ +C + F V I PD S+ L+ + K
Sbjct: 294 YKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCK 353
Query: 223 EGNAAKAKTTFGEM-------------VIRVGWSKENVMAYDAFLLTLLRASQIE---EV 266
EG ++K EM VI G+ +E + + LR +++ EV
Sbjct: 354 EGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEV 413
Query: 267 LRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGL 326
FL V C G F L + E + A P YN +I
Sbjct: 414 CDFLIV---SLCQEGKPFAAKHLLDRIIEEEGHEAKPE--------------TYNNLIES 456
Query: 327 QCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPT 386
++ A L ++ D+ TY + CL R + RE ES AEM +E P
Sbjct: 457 LSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPD 516
Query: 387 SSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGIC 433
S C A + D + A + S ES N+L+ +C
Sbjct: 517 SFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVC 563
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 146/371 (39%), Gaps = 31/371 (8%)
Query: 91 AVKFFRWAGRLQKHSPHAWN--LMVDLLGKNELFDPMWDAIRSM-----KQEGVLTLRTF 143
A+ FF+W P+ N L++ +L ++ F + + K+E V R
Sbjct: 96 AITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVL 155
Query: 144 VSA--------------FQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEE 189
VSA + Y G E F + + G VV N LL+ + +
Sbjct: 156 VSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLD 215
Query: 190 NQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMA 249
+ + I P+ +F IL + + N + F E + G+ + +++
Sbjct: 216 LMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDD-FLEKMEEEGF-EPDLVT 273
Query: 250 YDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMV 309
Y+ + + R +++E K+M P L +T + K+ A + MV
Sbjct: 274 YNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMV 333
Query: 310 AGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVR 369
GI P+ + YN +I C G + + +LL EM+ + PD T +I + VR ++
Sbjct: 334 DRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLL 393
Query: 370 ETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVE---NHVKPLHESAN 426
+F E+ + + C I L P AA + ++E + KP E+ N
Sbjct: 394 SAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKP--ETYN 451
Query: 427 ALLIGICSLSR 437
L I SLSR
Sbjct: 452 NL---IESLSR 459
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 127/323 (39%), Gaps = 10/323 (3%)
Query: 126 WDAIRSMKQEGV-LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSS 184
W M + G+ TF +C F E + M+ G E D+V N+L+SS
Sbjct: 221 WQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSS 280
Query: 185 ICCEENQTSTAMEFFEEV-KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWS 243
C + A ++ + + ++ PD ++ L++G K+G +A TF MV R
Sbjct: 281 YC-RRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDR--GI 337
Query: 244 KENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIP 303
K + M+Y+ + + +++ + L M + P ++ FV+E A+
Sbjct: 338 KPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVN 397
Query: 304 LWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVL---HGAFPDSLTYNMIFK 360
+ + + + +I C G+ A LLD ++ H A P+ TYN + +
Sbjct: 398 FVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPE--TYNNLIE 455
Query: 361 CLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKP 420
L R + E ++ + A I L A + + M ++ VKP
Sbjct: 456 SLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKP 515
Query: 421 LHESANALLIGICSLSRFSEVRR 443
AL+ G C F + R
Sbjct: 516 DSFICGALVYGYCKELDFDKAER 538
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%)
Query: 304 LWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLV 363
++ M GI PN +N + + CN+ L++M G PD +TYN +
Sbjct: 223 VYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYC 282
Query: 364 RNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHE 423
R +++E + M + P + I L AH+ + MV+ +KP
Sbjct: 283 RRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCM 342
Query: 424 SANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR 472
S N L+ C + ++ +ML ++ T + + F EGR
Sbjct: 343 SYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGR 391
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/470 (20%), Positives = 192/470 (40%), Gaps = 36/470 (7%)
Query: 29 KPNEFPTHLDTPNVSPVARTLCNLLTRTSPPEIETALTSSGIHPSDDCVREVLKLSYNYP 88
K + FP + V+ +++TL TR+ L ++ I S+ V ++L+ + P
Sbjct: 20 KNSPFPQLCNVLLVASLSKTLSQSGTRS--------LDANSIPISEPVVLQILRRNSIDP 71
Query: 89 HSAVKFFRWAGRLQ---KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVS 145
+ FFRW L+ KHS A++ + + + L + D + SMK++GV +T
Sbjct: 72 SKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAK 131
Query: 146 AF-QSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFF----- 199
S +G+F A+ D M+ G + +S+L ++ ++++ A+
Sbjct: 132 ILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALV-KKHELRLALSILFKLLE 190
Query: 200 ------EEVKGKIA-----PDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVM 248
++ G++ P + LL G + ++ K F E + + K +
Sbjct: 191 ASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVF-EKLKGMKRFKFDTW 249
Query: 249 AYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKF------FTYALDVFVKENDAAHAI 302
+Y+ + ++ L K MK+ G F + + V A A+
Sbjct: 250 SYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDAL 309
Query: 303 PLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCL 362
+WD + G P+ Y +I C + +D+A R+ EM +G PD++ YN +
Sbjct: 310 IVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGT 369
Query: 363 VRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLH 422
++ +KV E F +MV+ + I LF EA ++ + +
Sbjct: 370 LKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDA 429
Query: 423 ESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR 472
+ + + + +C + + E+M R + T++ L F+ +GR
Sbjct: 430 ITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGR 479
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/462 (19%), Positives = 185/462 (40%), Gaps = 54/462 (11%)
Query: 40 PNVSPVARTLCNLLTRTSPPE----IETALTSSGIHPS-DDCVREVLKLSYNYP-HSAVK 93
P +SP+A+ + + + + + P+ + AL S+ H S DD + ++L N S +
Sbjct: 105 PVLSPIAQKILSFIQKETDPDKVADVLGALPST--HASWDDLINVSVQLRLNKKWDSIIL 162
Query: 94 FFRWAGRLQKHSPHA--WNLMVDLLGKNELFDPMWDA-IRSMKQEGVLTLRTFVSAFQSY 150
W R P +NL++D G+ + ++ ++ V T T+ ++Y
Sbjct: 163 VCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAY 222
Query: 151 CVAGRFNEAIMSFDVMDNHGIEKDVVAV---NSLLSSICCEENQTSTAMEFFEEVK-GKI 206
C+AG A + M NH + + V N+ + + + T A++ F+ +K +
Sbjct: 223 CMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC 282
Query: 207 APDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEV 266
P +++ +++ + G A+K+ ++
Sbjct: 283 KPTTETYNLMINLY---GKASKSYMSW--------------------------------- 306
Query: 267 LRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGL 326
+ M+ H C P + +T ++ F +E A +++ + G+ P++ +YNA++
Sbjct: 307 -KLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMES 365
Query: 327 QCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPT 386
G A + M G PD +YN++ R + E+ F EM + PT
Sbjct: 366 YSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPT 425
Query: 387 SSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAE 446
+ ++ D I M EN V+P N++L L +F+++ +
Sbjct: 426 MKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILA 485
Query: 447 DMLDRRIIIYESTMNKLKDAFYTEGRSRKDRFDSLFRRWKAR 488
+M + ST N L + + G +R + LF K +
Sbjct: 486 EMENGPCTADISTYNILINIYGKAGFL--ERIEELFVELKEK 525
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 117/323 (36%), Gaps = 54/323 (16%)
Query: 103 KHSPHAWNLMVDLLGKNELFDPMWDAIRSMK----QEGVLTLRTFVSAFQSYCVAGRFNE 158
K + +NLM++L GK W M+ + + T V+AF G +
Sbjct: 283 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAR---EGLCEK 339
Query: 159 AIMSFDVMDNHGIEKDVVAVNSLLSS-------------------ICCEENQTS------ 193
A F+ + G+E DV N+L+ S + CE ++ S
Sbjct: 340 AEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVD 399
Query: 194 ---------TAMEFFEEVKG-KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWS 243
A FEE+K IAP S +LL + K + K + EM
Sbjct: 400 AYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM------- 452
Query: 244 KENVMAYDAFLLTLL-----RASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDA 298
EN + D F+L + R Q ++ + L M++ C + + ++++ K
Sbjct: 453 SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFL 512
Query: 299 AHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMI 358
L+ + P+++ + + IG + +EM+ G PD T ++
Sbjct: 513 ERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVL 572
Query: 359 FKCLVRNKKVRETESFFAEMVKN 381
++V + S M K
Sbjct: 573 LSACSSEEQVEQVTSVLRTMHKG 595
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 162/369 (43%), Gaps = 8/369 (2%)
Query: 85 YNYPHSAVKFFRWAGRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEG-VLTLRTF 143
+N AV+ F A +N M+ + ++ F + + +M+Q G V L +F
Sbjct: 204 WNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISF 263
Query: 144 VSAFQSYCVAGRF--NEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
+ + +G N A+ D++ N G+ D + N+LLS+ C ++ A++ FE+
Sbjct: 264 NTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSA-CSRDSNLDGAVKVFED 322
Query: 202 VKG-KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
++ + PD ++ ++ + + G AA+A+ F E+ ++ G+ + V Y++ L R
Sbjct: 323 MEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELK-GFFPDAV-TYNSLLYAFARE 380
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVA-GGIMPNLIM 319
E+V + M+ + + ++ K+ A+ L+ M G P+ I
Sbjct: 381 RNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAIT 440
Query: 320 YNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMV 379
Y +I A L+ EM+ G P TY+ + + K E E F+ M+
Sbjct: 441 YTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCML 500
Query: 380 KNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFS 439
++ P + + + +L ++ A ++ M+ + P + +++G+ +R
Sbjct: 501 RSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSD 560
Query: 440 EVRRHAEDM 448
++++ DM
Sbjct: 561 DIQKTIRDM 569
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/359 (16%), Positives = 144/359 (40%), Gaps = 7/359 (1%)
Query: 112 MVDLLGKNELFDPMWDAIRSMKQEG-VLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHG 170
+++ GK +L+ + +++Q G L+T+ S +Y G + A F+ M G
Sbjct: 758 IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDG 817
Query: 171 IEKDVVAVNSLLSSICCEEN--QTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAK 228
V ++N LL ++C + + +E +++ KI+ S ++L+ + + GN +
Sbjct: 818 PSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKS--SILLMLDAFARAGNIFE 875
Query: 229 AKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYA 288
K + M + + Y + L + ++ + + M++ + L +
Sbjct: 876 VKKIYSSM--KAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSM 933
Query: 289 LDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGA 348
L ++ D + ++ + G+ P+ YN +I + C + + + L+ +M G
Sbjct: 934 LKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGL 993
Query: 349 FPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHE 408
P TY + + K + + E F E++ S + + D A +
Sbjct: 994 DPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEK 1053
Query: 409 IWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAF 467
+ M ++P + + L++ S E + ++ D + + + + DA+
Sbjct: 1054 LLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAY 1112
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 128/328 (39%), Gaps = 19/328 (5%)
Query: 91 AVKFFRWAGRLQKHSPHA--WNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAF 147
A++ ++ L +P A + +++D LGK + M G+ TL+T+ +
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI 480
Query: 148 QSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKI 206
Y AG+ EA +F M G + D +A + +L + N+T A + + +
Sbjct: 481 CGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLD-VLLRGNETRKAWGLYRDMISDGH 539
Query: 207 APDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEV 266
P + +++ G KE + + T +M G + + + L++ +
Sbjct: 540 TPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISS------VLVKGECFDLA 593
Query: 267 LRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGL 326
R LKV + L + + A L + + ++ A+I L
Sbjct: 594 ARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVL 653
Query: 327 QCNNGEVDNAFRLLDEM----VLHG-AFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKN 381
C +V+N LDE +HG F S Y + C V N+ E F+++ +
Sbjct: 654 HC---KVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLS 710
Query: 382 EWPPTSSNCAAAIAMLFDCDDPEAAHEI 409
+ S C + + + PE AH++
Sbjct: 711 GCEASESVCKSMVVVYCKLGFPETAHQV 738
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 2/218 (0%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
T VS + +GR EA F+ + GI+ A N+LL E
Sbjct: 306 TLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEM 365
Query: 202 VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRAS 261
K ++PD ++++L++ + G A+ EM G + N + L
Sbjct: 366 EKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEM--EAGDVQPNSFVFSRLLAGFRDRG 423
Query: 262 QIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYN 321
+ ++ + LK MK P +F+ +D F K N HA+ +D M++ GI P+ + +N
Sbjct: 424 EWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWN 483
Query: 322 AMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIF 359
+I C +G A + + M G P + TYN++
Sbjct: 484 TLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMI 521
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 128/293 (43%), Gaps = 12/293 (4%)
Query: 98 AGRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFN 157
AG +Q +S L+ + E + + ++ MK GV R F + G+FN
Sbjct: 402 AGDVQPNSFVFSRLLAGFRDRGE-WQKTFQVLKEMKSIGVKPDRQFYNVVID--TFGKFN 458
Query: 158 ---EAIMSFDVMDNHGIEKDVVAVNSLLSSIC-CEENQTSTAMEFFEEVKGK-IAPDGDS 212
A+ +FD M + GIE D V N+L+ C C+ + A E FE ++ + P +
Sbjct: 459 CLDHAMTTFDRMLSEGIEPDRVTWNTLID--CHCKHGRHIVAEEMFEAMERRGCLPCATT 516
Query: 213 FAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKV 272
+ I++ + + K G+M + NV+ + + ++ + + + L+
Sbjct: 517 YNIMINSYGDQERWDDMKRLLGKM--KSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEE 574
Query: 273 MKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGE 332
MK P + ++ + + + A+ + M + G+ P+L+ N++I +
Sbjct: 575 MKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRR 634
Query: 333 VDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPP 385
AF +L M +G PD +TY + K L+R K ++ + EM+ + P
Sbjct: 635 DAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKP 687
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/344 (20%), Positives = 135/344 (39%), Gaps = 34/344 (9%)
Query: 124 PMWDA---IRSMKQEGVLT-LRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVN 179
P+ DA + M++ GV T+ +Y AGR+ A + M+ ++ + +
Sbjct: 354 PLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFS 413
Query: 180 SLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVI 238
LL+ + + + +E+K + PD + ++++ + K A TTF M+
Sbjct: 414 RLLAGFR-DRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLS 472
Query: 239 ------RVGWSKENVMAYDAFLLTLL-------RASQIEEVLRFLKVMKDHDCFPGLKFF 285
RV W+ TL+ R EE+ + M+ C P +
Sbjct: 473 EGIEPDRVTWN------------TLIDCHCKHGRHIVAEEMF---EAMERRGCLPCATTY 517
Query: 286 TYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVL 345
++ + + L M + GI+PN++ + ++ + +G ++A L+EM
Sbjct: 518 NIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKS 577
Query: 346 HGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEA 405
G P S YN + + + + F M + P+ + I +
Sbjct: 578 VGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAE 637
Query: 406 AHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDML 449
A + YM EN VKP + L+ + + +F +V E+M+
Sbjct: 638 AFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMI 681
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/462 (19%), Positives = 185/462 (40%), Gaps = 54/462 (11%)
Query: 40 PNVSPVARTLCNLLTRTSPPE----IETALTSSGIHPS-DDCVREVLKLSYNYP-HSAVK 93
P +SP+A+ + + + + + P+ + AL S+ H S DD + ++L N S +
Sbjct: 83 PVLSPIAQKILSFIQKETDPDKVADVLGALPST--HASWDDLINVSVQLRLNKKWDSIIL 140
Query: 94 FFRWAGRLQKHSPHA--WNLMVDLLGKNELFDPMWDA-IRSMKQEGVLTLRTFVSAFQSY 150
W R P +NL++D G+ + ++ ++ V T T+ ++Y
Sbjct: 141 VCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAY 200
Query: 151 CVAGRFNEAIMSFDVMDNHGIEKDVVAV---NSLLSSICCEENQTSTAMEFFEEVK-GKI 206
C+AG A + M NH + + V N+ + + + T A++ F+ +K +
Sbjct: 201 CMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC 260
Query: 207 APDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEV 266
P +++ +++ + G A+K+ ++
Sbjct: 261 KPTTETYNLMINLY---GKASKSYMSW--------------------------------- 284
Query: 267 LRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGL 326
+ M+ H C P + +T ++ F +E A +++ + G+ P++ +YNA++
Sbjct: 285 -KLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMES 343
Query: 327 QCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPT 386
G A + M G PD +YN++ R + E+ F EM + PT
Sbjct: 344 YSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPT 403
Query: 387 SSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAE 446
+ ++ D I M EN V+P N++L L +F+++ +
Sbjct: 404 MKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILA 463
Query: 447 DMLDRRIIIYESTMNKLKDAFYTEGRSRKDRFDSLFRRWKAR 488
+M + ST N L + + G +R + LF K +
Sbjct: 464 EMENGPCTADISTYNILINIYGKAGFL--ERIEELFVELKEK 503
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 117/323 (36%), Gaps = 54/323 (16%)
Query: 103 KHSPHAWNLMVDLLGKNELFDPMWDAIRSMK----QEGVLTLRTFVSAFQSYCVAGRFNE 158
K + +NLM++L GK W M+ + + T V+AF G +
Sbjct: 261 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAR---EGLCEK 317
Query: 159 AIMSFDVMDNHGIEKDVVAVNSLLSS-------------------ICCEENQTS------ 193
A F+ + G+E DV N+L+ S + CE ++ S
Sbjct: 318 AEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVD 377
Query: 194 ---------TAMEFFEEVKG-KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWS 243
A FEE+K IAP S +LL + K + K + EM
Sbjct: 378 AYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM------- 430
Query: 244 KENVMAYDAFLLTLL-----RASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDA 298
EN + D F+L + R Q ++ + L M++ C + + ++++ K
Sbjct: 431 SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFL 490
Query: 299 AHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMI 358
L+ + P+++ + + IG + +EM+ G PD T ++
Sbjct: 491 ERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVL 550
Query: 359 FKCLVRNKKVRETESFFAEMVKN 381
++V + S M K
Sbjct: 551 LSACSSEEQVEQVTSVLRTMHKG 573
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 119/276 (43%), Gaps = 5/276 (1%)
Query: 168 NHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK--GKIAPDGDSFAILLEGWEKEGN 225
N G++ + N L+ C + + A EE+K G P+ +++ L++
Sbjct: 189 NLGLQPNTCIFNILVKHHC-KNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSR 247
Query: 226 AAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFF 285
+ +A F +M+ + G S + V ++ + RA ++E + L MK + C P + +
Sbjct: 248 SKEAVELFEDMISKEGISPDPV-TFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNY 306
Query: 286 TYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVL 345
+ ++ F K A +D + G+ + + Y ++ C NGE D A +LL EM
Sbjct: 307 SALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKA 366
Query: 346 HGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEA 405
D+LTYN+I + L + E + + + L + E
Sbjct: 367 SRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEK 426
Query: 406 AHEIWSYMVENHVKPLHESANALLIGICSLSRFSEV 441
A + S M E + P H + N L++ +C S ++E+
Sbjct: 427 AVKFLSVMSERGIWPHHATWNELVVRLCE-SGYTEI 461
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 103/245 (42%), Gaps = 13/245 (5%)
Query: 106 PHAWNLMVDLLGKNELFDPMWDAIRSMKQEGV-LTLRTFVSAFQSYCVAGRFNEAIMSFD 164
P +N+M++ + + + MK+ G + + + +C G+ EA +FD
Sbjct: 268 PVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFD 327
Query: 165 VMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAILLEGWEKE 223
+ G++ D V +L++ C +T AM+ E+K + D ++ ++L G E
Sbjct: 328 EVKKTGLKLDTVGYTTLMNCF-CRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSE 386
Query: 224 GNAAKAKTTFGEMVIRVGWSKENVM----AYDAFLLTLLRASQIEEVLRFLKVMKDHDCF 279
G + +A + W E V +Y L L ++E+ ++FL VM + +
Sbjct: 387 GRSEEALQMLDQ------WGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIW 440
Query: 280 PGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRL 339
P + + + + + + G++P + A++ C ++ + F L
Sbjct: 441 PHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFEL 500
Query: 340 LDEMV 344
LD +V
Sbjct: 501 LDSLV 505
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 152/404 (37%), Gaps = 46/404 (11%)
Query: 100 RLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNE 158
++ K S + LMV G+ + M+ G+ T R + S +Y V +E
Sbjct: 303 KISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDE 362
Query: 159 AIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK-----------GKI- 206
A+ M GIE +V + ++ + A +F+E K GKI
Sbjct: 363 ALSCVRKMKEEGIEMSLVTYSVIVGGFS-KAGHAEAADYWFDEAKRIHKTLNASIYGKII 421
Query: 207 -------------------------APDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVG 241
AP + +++G+ + K F + G
Sbjct: 422 YAHCQTCNMERAEALVREMEEEGIDAPIA-IYHTMMDGYTMVADEKKGLVVFKRLK-ECG 479
Query: 242 WSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHA 301
++ V+ Y + + +I + L +VMK+ LK ++ ++ FVK D A+A
Sbjct: 480 FTP-TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 302 IPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKC 361
+++ MV G+ P++I+YN +I C G +D A + + EM P + T+ I
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHG 598
Query: 362 LVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPL 421
++ +R + F M + PT I L + E A EI M V
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Query: 422 HESANALLIGICSLS----RFSEVRRHAEDMLDRRIIIYESTMN 461
+ ++ G S+ F R + LD I YE+ +
Sbjct: 659 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLK 702
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 125/324 (38%), Gaps = 3/324 (0%)
Query: 109 WNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMD 167
+ +++L K + R MK+EGV L+T+ + + A F+ M
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Query: 168 NHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAA 227
G++ DV+ N+++S+ C N E K + P +F ++ G+ K G+
Sbjct: 547 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMR 606
Query: 228 KAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTY 287
++ F +M+ R G V ++ + L+ Q+E+ + L M +T
Sbjct: 607 RSLEVF-DMMRRCGCVP-TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTK 664
Query: 288 ALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHG 347
+ + D A + + G+ ++ Y A++ C +G + +A + EM
Sbjct: 665 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN 724
Query: 348 AFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAH 407
+S YN++ R V E +M K P + I+ D A
Sbjct: 725 IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRAT 784
Query: 408 EIWSYMVENHVKPLHESANALLIG 431
+ M VKP ++ L+ G
Sbjct: 785 QTIEEMEALGVKPNIKTYTTLIKG 808
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 110/256 (42%), Gaps = 8/256 (3%)
Query: 128 AIRSMKQEGVL----TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLS 183
AI+++K+ L T RTF+ Y +G ++ FD+M G V N L++
Sbjct: 573 AIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLIN 632
Query: 184 SICCEENQTSTAMEFFEEVK-GKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGW 242
+ E+ Q A+E +E+ ++ + ++ +++G+ G+ KA F + +
Sbjct: 633 GLV-EKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRL--QNEG 689
Query: 243 SKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAI 302
++ Y+A L ++ +++ L K M + + +D + + D A
Sbjct: 690 LDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAA 749
Query: 303 PLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCL 362
L M G+ P++ Y + I G+++ A + ++EM G P+ TY + K
Sbjct: 750 DLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGW 809
Query: 363 VRNKKVRETESFFAEM 378
R + S + EM
Sbjct: 810 ARASLPEKALSCYEEM 825
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 145/383 (37%), Gaps = 47/383 (12%)
Query: 83 LSYNYPHSAVK------FFRWAGR--LQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQ 134
L YN H A K FFRW R L +H M+ +LG+ + + M +
Sbjct: 119 LVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPE 178
Query: 135 EGV-LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTS 193
+GV FV +SY AG E++ F M + G+E+ + + NSL I
Sbjct: 179 KGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMM 238
Query: 194 TAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAF 253
F + V + P ++ ++L G F
Sbjct: 239 AKRYFNKMVSEGVEPTRHTYNLMLWG---------------------------------F 265
Query: 254 LLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGI 313
L+L ++E LRF + MK P F ++ F + A L+ M I
Sbjct: 266 FLSL----RLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKI 321
Query: 314 MPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETES 373
P+++ Y MI VD+ R+ +EM G P++ TY+ + L K+ E ++
Sbjct: 322 GPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKN 381
Query: 374 FFAEMV-KNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGI 432
M+ K+ P +S + D AA E+ M +V L+
Sbjct: 382 ILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQ 441
Query: 433 CSLSRFSEVRRHAEDMLDRRIII 455
C S ++ + + ++++ II+
Sbjct: 442 CKASAYNRAIKLLDTLIEKEIIL 464
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/404 (19%), Positives = 154/404 (38%), Gaps = 20/404 (4%)
Query: 90 SAVKFFRWAGRLQKHSPHAWNLMVDLLGKN----ELFDPMWDAIRSMKQEGVL-TLRTFV 144
S + A + KH ++ ++L K + W+ IR M +G+ + T+
Sbjct: 272 SIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYT 331
Query: 145 SAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG 204
C G + ++ M + G E + + S++ S C+ + A+ F ++K
Sbjct: 332 ILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKA 391
Query: 205 K-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQI 263
++PD +++I++ G K G A + EM + N + A LL L + +
Sbjct: 392 DGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK--RILPNSRTHGALLLGLCQKGML 449
Query: 264 EEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAM 323
E L + + + +D + K A+ L+ ++ GI P++ +N++
Sbjct: 450 LEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSL 509
Query: 324 IGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEW 383
I C + A ++LD + L+G P ++Y + + + EM
Sbjct: 510 IYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGI 569
Query: 384 PPTSSNCAAAIAMLF------DCDDP------EAAHEIWSYMVENHVKPLHESANALLIG 431
PPT+ + L +C+ E + M + P + N ++
Sbjct: 570 PPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQY 629
Query: 432 ICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRK 475
+C + S E M R + +T N L D+ G RK
Sbjct: 630 LCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRK 673
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 133/342 (38%), Gaps = 48/342 (14%)
Query: 151 CVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPD 209
C+ G EA+ M+ HG+E D V N L S A E ++ K ++PD
Sbjct: 268 CLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL-GMISGAWEVIRDMLDKGLSPD 326
Query: 210 GDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRF 269
++ ILL G + GN +M+ R G+ +++ L L + +I+E L
Sbjct: 327 VITYTILLCGQCQLGNIDMGLVLLKDMLSR-GFELNSIIPCSVMLSGLCKTGRIDEALSL 385
Query: 270 LKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCN 329
MK P L ++ + K A+ L+D M I+PN + A++ C
Sbjct: 386 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQ 445
Query: 330 NGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSN 389
G + A LLD ++ G D + YN++ + S
Sbjct: 446 KGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK-----------------------SG 482
Query: 390 CAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDM- 448
C E A E++ ++E + P + N+L+ G C +E R+ + +
Sbjct: 483 CI------------EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 449 ---LDRRIIIYESTMNKLKDAFYTEGRSRKDRFDSLFRRWKA 487
L ++ Y + M DA+ G ++ D L R KA
Sbjct: 531 LYGLAPSVVSYTTLM----DAYANCGNTKS--IDELRREMKA 566
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 55/116 (47%)
Query: 245 ENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPL 304
+N Y + L R ++E+ + FL+ + D P + F + + K A
Sbjct: 185 KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSF 244
Query: 305 WDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFK 360
+ ++ G++P++ +N +I C G + A L +M HG PDS+TYN++ K
Sbjct: 245 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAK 300
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 119/320 (37%), Gaps = 35/320 (10%)
Query: 100 RLQKHSPHAWNLMVDLLGKNELFD--PMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFN 157
R+ +S L++ L K L + + D++ S + + L V Y +G
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIV--IDGYAKSGCIE 485
Query: 158 EAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK-GKIAPDGDSFAIL 216
EA+ F V+ GI V NSL+ C +N + A + + +K +AP S+ L
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQN-IAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 217 LEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDH 276
++ + GN EM G NV Y L R + E L+
Sbjct: 545 MDAYANCGNTKSIDELRREMKAE-GIPPTNV-TYSVIFKGLCRGWKHENCNHVLRERIFE 602
Query: 277 DCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNA 336
C GL+ M + GI P+ I YN +I C + A
Sbjct: 603 KCKQGLR-----------------------DMESEGIPPDQITYNTIIQYLCRVKHLSGA 639
Query: 337 FRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAM 396
F L+ M S TYN++ L +R+ +SF + E + S A +
Sbjct: 640 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSL--QEQNVSLSKFAYTTLI 697
Query: 397 LFDC--DDPEAAHEIWSYMV 414
C DPE A +++ ++
Sbjct: 698 KAHCVKGDPEMAVKLFHQLL 717
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/404 (19%), Positives = 154/404 (38%), Gaps = 20/404 (4%)
Query: 90 SAVKFFRWAGRLQKHSPHAWNLMVDLLGKN----ELFDPMWDAIRSMKQEGVL-TLRTFV 144
S + A + KH ++ ++L K + W+ IR M +G+ + T+
Sbjct: 272 SIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYT 331
Query: 145 SAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG 204
C G + ++ M + G E + + S++ S C+ + A+ F ++K
Sbjct: 332 ILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKA 391
Query: 205 K-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQI 263
++PD +++I++ G K G A + EM + N + A LL L + +
Sbjct: 392 DGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK--RILPNSRTHGALLLGLCQKGML 449
Query: 264 EEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAM 323
E L + + + +D + K A+ L+ ++ GI P++ +N++
Sbjct: 450 LEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSL 509
Query: 324 IGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEW 383
I C + A ++LD + L+G P ++Y + + + EM
Sbjct: 510 IYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGI 569
Query: 384 PPTSSNCAAAIAMLF------DCDDP------EAAHEIWSYMVENHVKPLHESANALLIG 431
PPT+ + L +C+ E + M + P + N ++
Sbjct: 570 PPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQY 629
Query: 432 ICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRK 475
+C + S E M R + +T N L D+ G RK
Sbjct: 630 LCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRK 673
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 133/342 (38%), Gaps = 48/342 (14%)
Query: 151 CVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPD 209
C+ G EA+ M+ HG+E D V N L S A E ++ K ++PD
Sbjct: 268 CLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL-GMISGAWEVIRDMLDKGLSPD 326
Query: 210 GDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRF 269
++ ILL G + GN +M+ R G+ +++ L L + +I+E L
Sbjct: 327 VITYTILLCGQCQLGNIDMGLVLLKDMLSR-GFELNSIIPCSVMLSGLCKTGRIDEALSL 385
Query: 270 LKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCN 329
MK P L ++ + K A+ L+D M I+PN + A++ C
Sbjct: 386 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQ 445
Query: 330 NGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSN 389
G + A LLD ++ G D + YN++ + S
Sbjct: 446 KGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK-----------------------SG 482
Query: 390 CAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDM- 448
C E A E++ ++E + P + N+L+ G C +E R+ + +
Sbjct: 483 CI------------EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 449 ---LDRRIIIYESTMNKLKDAFYTEGRSRKDRFDSLFRRWKA 487
L ++ Y + M DA+ G ++ D L R KA
Sbjct: 531 LYGLAPSVVSYTTLM----DAYANCGNTKS--IDELRREMKA 566
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 55/116 (47%)
Query: 245 ENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPL 304
+N Y + L R ++E+ + FL+ + D P + F + + K A
Sbjct: 185 KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSF 244
Query: 305 WDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFK 360
+ ++ G++P++ +N +I C G + A L +M HG PDS+TYN++ K
Sbjct: 245 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAK 300
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 119/320 (37%), Gaps = 35/320 (10%)
Query: 100 RLQKHSPHAWNLMVDLLGKNELFD--PMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFN 157
R+ +S L++ L K L + + D++ S + + L V Y +G
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIV--IDGYAKSGCIE 485
Query: 158 EAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK-GKIAPDGDSFAIL 216
EA+ F V+ GI V NSL+ C +N + A + + +K +AP S+ L
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQN-IAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 217 LEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDH 276
++ + GN EM G NV Y L R + E L+
Sbjct: 545 MDAYANCGNTKSIDELRREMKAE-GIPPTNV-TYSVIFKGLCRGWKHENCNHVLRERIFE 602
Query: 277 DCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNA 336
C GL+ M + GI P+ I YN +I C + A
Sbjct: 603 KCKQGLR-----------------------DMESEGIPPDQITYNTIIQYLCRVKHLSGA 639
Query: 337 FRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAM 396
F L+ M S TYN++ L +R+ +SF + E + S A +
Sbjct: 640 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSL--QEQNVSLSKFAYTTLI 697
Query: 397 LFDC--DDPEAAHEIWSYMV 414
C DPE A +++ ++
Sbjct: 698 KAHCVKGDPEMAVKLFHQLL 717
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 136/316 (43%), Gaps = 22/316 (6%)
Query: 65 LTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGRLQKHSPH---AWNLMVDLLGKNEL 121
++ SG P V++ ++Y ++ W +LQ P + ++V+L+ +
Sbjct: 200 MSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCG 259
Query: 122 FDPMWDAIRSMKQEGVLT-LRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNS 180
+ + M EG + T+ S C G E + +HG+E + V N+
Sbjct: 260 SARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNT 319
Query: 181 LLSSICCEENQTSTAMEFFEEV--------KGKIAPDGDSFAILLEGWEKEGNAAKAKTT 232
LL S+C + E+++EV + P ++ IL+ G K ++A
Sbjct: 320 LLHSLC--------SHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDF 371
Query: 233 FGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVF 292
F +M+ + +++ Y+ L + + +++ + L ++K+ C PGL + +D
Sbjct: 372 FYQMLEQ--KCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGL 429
Query: 293 VKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDS 352
K+ A+ L+ M+ GI P+ I ++I C V+ A ++L E G
Sbjct: 430 AKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRG 489
Query: 353 LTYNMIFKCLVRNKKV 368
TY ++ + L + K++
Sbjct: 490 STYRLVIQGLCKKKEI 505
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 104/241 (43%), Gaps = 4/241 (1%)
Query: 147 FQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFE-EVKGK 205
+ C G+ +A +VM H + ++L+ + +Q AM V
Sbjct: 111 LHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLA-RIDQLDKAMCILRVMVMSG 169
Query: 206 IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEE 265
PD ++ +++ K+G+ A +M + S +V+ Y+ + + E+
Sbjct: 170 GVPDTITYNMIIGNLCKKGHIRTALVLLEDM--SLSGSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 266 VLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIG 325
+RF K + C P + +T +++ + +A AI + + M G P+++ YN+++
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Query: 326 LQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPP 385
C G ++ ++ ++ HG +++TYN + L ++ E E M + + P
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCP 347
Query: 386 T 386
T
Sbjct: 348 T 348
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 4/134 (2%)
Query: 332 EVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCA 391
++D A +L MV+ G PD++TYNMI L + +R +M + PP
Sbjct: 154 QLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYN 213
Query: 392 AAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDR 451
I +FD + E A W ++N P + L+ +C + EDM
Sbjct: 214 TVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVE 273
Query: 452 R----IIIYESTMN 461
I+ Y S +N
Sbjct: 274 GCYPDIVTYNSLVN 287
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/367 (19%), Positives = 141/367 (38%), Gaps = 24/367 (6%)
Query: 104 HSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSF 163
H P NL+ L ++L M + GV T+ + C G A++
Sbjct: 138 HFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLL 197
Query: 164 DVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFF-EEVKGKIAPDGDSFAILLEGWEK 222
+ M G DV+ N+++ + + A+ F+ ++++ P ++ +L+E +
Sbjct: 198 EDMSLSGSPPDVITYNTVIRCMF-DYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCR 256
Query: 223 EGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGL 282
+A+A +M + + +++ Y++ + R +EEV ++ + H GL
Sbjct: 257 YCGSARAIEVLEDMAVEGCYP--DIVTYNSLVNYNCRRGNLEEVASVIQHILSH----GL 310
Query: 283 KFFTYALDVFVKENDAAHAI---PLWD-------AMVAGGIMPNLIMYNAMIGLQCNNGE 332
+ T V N H++ WD M P +I YN +I C
Sbjct: 311 ELNT------VTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARL 364
Query: 333 VDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAA 392
+ A +M+ PD +TYN + + + V + + PP +
Sbjct: 365 LSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNS 424
Query: 393 AIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRR 452
I L + A E++ M++ + P + +L+ G C + E + ++ +R
Sbjct: 425 VIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRG 484
Query: 453 IIIYEST 459
I ST
Sbjct: 485 NGIRGST 491
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 145/377 (38%), Gaps = 77/377 (20%)
Query: 86 NYPHSAVKFFRWAG-------RLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEG-- 136
N P +A+K FR R ++S +++++ LG +++FD + + +K +
Sbjct: 20 NDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRI 79
Query: 137 VLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVA----------------VNS 180
V T F + + + A+ FD M + ++ V + +
Sbjct: 80 VPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKE 139
Query: 181 LLSSI-----------------CCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEK 222
LSSI C + A++ F+E VK K+ P G +F L+ G K
Sbjct: 140 RLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCK 199
Query: 223 EGNAA--------------------------KAKTTFGEMVIRV--------GWSKENVM 248
+ KA GE+ G K +
Sbjct: 200 DSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAA 259
Query: 249 AYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAM 308
Y + +L++A + EV L+ M + C P + ++ F END+ A + D M
Sbjct: 260 IYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEM 319
Query: 309 VAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKV 368
V G+ P++I YN ++G+ + + A L ++M G PD+L+Y ++F L +
Sbjct: 320 VEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQF 379
Query: 369 RETESFFAEMVKNEWPP 385
E EM+ + P
Sbjct: 380 EEAAVILDEMLFKGYKP 396
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 149/354 (42%), Gaps = 26/354 (7%)
Query: 64 ALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGR--LQKHSPHAWNLMVDLLGKNEL 121
+L SG PS E+ N PH +++FF + R L H H+ + ++ +L ++ L
Sbjct: 63 SLQPSGFTPSQ--FSEITLCLRNNPHLSLRFFLFTRRYSLCSHDTHSCSTLIHILSRSRL 120
Query: 122 FDPMWDAIR------SMKQEGVLTLRTFVSAFQSY--CVAGRFNEAIMSFDVMDNHGIEK 173
+ IR + ++ L+ F S +SY C + F ++ +D+ I+
Sbjct: 121 KSHASEIIRLALRLAATDEDEDRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDG 180
Query: 174 DVVAVNSLLSSICCEENQTSTAMEFFEEV-KGKIAPDGDSFAILLEGWEKEGNAAKAKTT 232
V+ + L S Q ST EV + + A +G + G + + + +AK
Sbjct: 181 AVMVMRKLRSRGI--NAQISTCNALITEVSRRRGASNGYKMYREVFGLD-DVSVDEAKKM 237
Query: 233 FGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDH-DCFPGLKFFTYALDV 291
G++ K N +++ +++ R + E V R + M++ C P + + ++
Sbjct: 238 IGKI-------KPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEA 290
Query: 292 FVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPD 351
+ + A +W+ M G++ +++ YN MIG C+N EV A L +M L G
Sbjct: 291 YCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECT 350
Query: 352 SLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEA 405
LTY + + V + EM + + A + L CDD +
Sbjct: 351 CLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGL--CDDRDG 402
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/445 (21%), Positives = 176/445 (39%), Gaps = 34/445 (7%)
Query: 33 FPTHLDTPNVSPVARTLCNLLTRTSPPEIETALTSS----GIHPSDDCVREVLK--LSYN 86
F T +D + V L + R + LT GI PS +LK L +
Sbjct: 191 FETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVH 250
Query: 87 YPHSAVKFFRWAGRLQKH-SPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVS 145
A +F +H + +L + + FD W+ + MK G+ R +
Sbjct: 251 GLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGI---RPDIV 307
Query: 146 AFQSY----CVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
AF + C AG EA + GI +D V+V+S++ C + + A++
Sbjct: 308 AFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC-KVGKPEEAIKLIHS 366
Query: 202 VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRAS 261
+ + P+ ++ L G+ +A T F E + +G + V Y +
Sbjct: 367 FR--LRPNIFVYSSFLSNICSTGDMLRASTIFQE-IFELGLLPDCV-CYTTMIDGYCNLG 422
Query: 262 QIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYN 321
+ ++ ++ + P L T + + + A ++ M G+ +++ YN
Sbjct: 423 RTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYN 482
Query: 322 AMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKN 381
++ +++ F L+DEM G PD TYN++ +V + E +E+++
Sbjct: 483 NLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRR 542
Query: 382 EWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEV 441
+ P++ I D + A +W YM + +KP + +ALL G C R
Sbjct: 543 GFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQR---- 598
Query: 442 RRHAEDMLDRRIIIYESTMNKLKDA 466
+++ I+++ NKL DA
Sbjct: 599 -------MEKAIVLF----NKLLDA 612
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 126/315 (40%), Gaps = 5/315 (1%)
Query: 149 SYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAP 208
+C G+ EAI ++ + + ++ +S LS+IC + + F E + + P
Sbjct: 350 GFCKVGKPEEAI---KLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLP 406
Query: 209 DGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLR 268
D + +++G+ G KA FG + ++ G + ++ + R I +
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGAL-LKSG-NPPSLTTSTILIGACSRFGSISDAES 464
Query: 269 FLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQC 328
+ MK + + + + K + L D M + GI P++ YN +I
Sbjct: 465 VFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMV 524
Query: 329 NNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSS 388
G +D A ++ E++ G P +L + + + +E + M P
Sbjct: 525 VRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVV 584
Query: 389 NCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDM 448
C+A + E A +++ +++ +KP N L+ G CS+ + M
Sbjct: 585 TCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLM 644
Query: 449 LDRRIIIYESTMNKL 463
+ R ++ EST + L
Sbjct: 645 VQRGMLPNESTHHAL 659
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/445 (21%), Positives = 176/445 (39%), Gaps = 34/445 (7%)
Query: 33 FPTHLDTPNVSPVARTLCNLLTRTSPPEIETALTSS----GIHPSDDCVREVLK--LSYN 86
F T +D + V L + R + LT GI PS +LK L +
Sbjct: 191 FETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVH 250
Query: 87 YPHSAVKFFRWAGRLQKH-SPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVS 145
A +F +H + +L + + FD W+ + MK G+ R +
Sbjct: 251 GLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGI---RPDIV 307
Query: 146 AFQSY----CVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
AF + C AG EA + GI +D V+V+S++ C + + A++
Sbjct: 308 AFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC-KVGKPEEAIKLIHS 366
Query: 202 VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRAS 261
+ + P+ ++ L G+ +A T F E + +G + V Y +
Sbjct: 367 FR--LRPNIFVYSSFLSNICSTGDMLRASTIFQE-IFELGLLPDCV-CYTTMIDGYCNLG 422
Query: 262 QIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYN 321
+ ++ ++ + P L T + + + A ++ M G+ +++ YN
Sbjct: 423 RTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYN 482
Query: 322 AMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKN 381
++ +++ F L+DEM G PD TYN++ +V + E +E+++
Sbjct: 483 NLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRR 542
Query: 382 EWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEV 441
+ P++ I D + A +W YM + +KP + +ALL G C R
Sbjct: 543 GFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQR---- 598
Query: 442 RRHAEDMLDRRIIIYESTMNKLKDA 466
+++ I+++ NKL DA
Sbjct: 599 -------MEKAIVLF----NKLLDA 612
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 126/315 (40%), Gaps = 5/315 (1%)
Query: 149 SYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAP 208
+C G+ EAI ++ + + ++ +S LS+IC + + F E + + P
Sbjct: 350 GFCKVGKPEEAI---KLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLP 406
Query: 209 DGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLR 268
D + +++G+ G KA FG + ++ G + ++ + R I +
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGAL-LKSG-NPPSLTTSTILIGACSRFGSISDAES 464
Query: 269 FLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQC 328
+ MK + + + + K + L D M + GI P++ YN +I
Sbjct: 465 VFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMV 524
Query: 329 NNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSS 388
G +D A ++ E++ G P +L + + + +E + M P
Sbjct: 525 VRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVV 584
Query: 389 NCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDM 448
C+A + E A +++ +++ +KP N L+ G CS+ + M
Sbjct: 585 TCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLM 644
Query: 449 LDRRIIIYESTMNKL 463
+ R ++ EST + L
Sbjct: 645 VQRGMLPNESTHHAL 659
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 9/224 (4%)
Query: 166 MDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-KGKIAPDGDSFAILLEGWEKEG 224
M N G+ D+ A ++S +C + A E E++ K + PD F ++ + K G
Sbjct: 294 MLNQGMRLDITAYGVIISGLC-GNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352
Query: 225 NAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKF 284
A + +++ R G+ + +V+A + + + Q+ E + + + K +D
Sbjct: 353 RMKAAVNMYHKLIER-GF-EPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVM----- 405
Query: 285 FTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMV 344
+T +D KE D L+ + G++P+ MY + I C G + +AF+L MV
Sbjct: 406 YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMV 465
Query: 345 LHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSS 388
G D L Y + L + E F EM+ + P S+
Sbjct: 466 QEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSA 509
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 118/272 (43%), Gaps = 10/272 (3%)
Query: 208 PDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGW-SKENVMAYDAFLLTLLRASQIEEV 266
PD S+ L++G + G+ A + G+ K +++++++ + ++EV
Sbjct: 89 PDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEV 148
Query: 267 LRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGL 326
++ VM C P + ++ +D F K + A+ + +M + PN++ + +I
Sbjct: 149 FVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDG 207
Query: 327 QCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPT 386
C G+++ A L EM + +TY + + +++ E ++ MV++ P
Sbjct: 208 YCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPN 267
Query: 387 SSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAE 446
S I F D + A + + M+ ++ + ++ G+C + E E
Sbjct: 268 SLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVE 327
Query: 447 DM----LDRRIIIYESTMNKLKDAFYTEGRSR 474
DM L ++I+ + MN A++ GR +
Sbjct: 328 DMEKSDLVPDMVIFTTMMN----AYFKSGRMK 355
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 122/329 (37%), Gaps = 41/329 (12%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSIC--CEENQTSTAMEFF 199
+F S C G+ A M G E DV++ NSL+ C + S +E
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 200 EEVKGKIA-PDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLL 258
G I PD SF L G+ K F M + + NV+ Y ++ T
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSK---MKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFC 174
Query: 259 RASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLI 318
++ +++ L+ MK P + FT +D + K D A+ L+ M + N++
Sbjct: 175 KSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVV 234
Query: 319 MYNAMIGLQCNNGEV-----------------------------------DNAFRLLDEM 343
Y A+I C GE+ DNA + L +M
Sbjct: 235 TYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294
Query: 344 VLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDP 403
+ G D Y +I L N K++E +M K++ P + F
Sbjct: 295 LNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRM 354
Query: 404 EAAHEIWSYMVENHVKPLHESANALLIGI 432
+AA ++ ++E +P + + ++ GI
Sbjct: 355 KAAVNMYHKLIERGFEPDVVALSTMIDGI 383
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 121/281 (43%), Gaps = 12/281 (4%)
Query: 105 SPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAF-QSYCVAGRFNEAIMSF 163
S +A L V L K F + I S K + + F S +SY A FN A+ +F
Sbjct: 66 SRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTF 125
Query: 164 DVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK---GKIAPDGDSFAILLEGW 220
+ MD +G + V+ N+LL++ C + F+E+ KI PD S+ IL++ +
Sbjct: 126 EQMDQYGTPRSAVSFNALLNA-CLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSY 184
Query: 221 EKEGNAAKAKTTFGEMVIRVGWSKE-NVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCF 279
G KA +M G E +A+ L +L + ++E M C
Sbjct: 185 CDSGTPEKAIEIMRQM---QGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGC- 240
Query: 280 PGLKFFTYALDVFVKENDAAHAIP-LWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFR 338
L Y + + + ++ + L + M + G+ P+ I YN ++ C G +D A +
Sbjct: 241 -ELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKK 299
Query: 339 LLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMV 379
+ + + + P++ T+ + L ++ + + F + V
Sbjct: 300 VYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSV 340
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 109/506 (21%), Positives = 201/506 (39%), Gaps = 88/506 (17%)
Query: 28 HKPNEFPTHLDT-----PNVSPVARTLCNLLTRT--SPPEIETALTSSGIHPSDDCVREV 80
H+P T LD PN S +A+ L + TR SP + E + S ++ V E
Sbjct: 24 HRP--LTTKLDNTRFLHPNQSKLAQNLIVIFTRQPFSPDDPELLILSPELNTK---VVET 78
Query: 81 LKLSYNYPHSAVKFFRWAGRLQ--KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL 138
+ + A FF WA + + ++ +A+N M +L + +A VL
Sbjct: 79 VLNGFKRWGLAYLFFNWASKQEGYRNDMYAYNAMASILSRAR-----QNASLKALVVDVL 133
Query: 139 TLRTFVS----AFQSYCV--AGRFNEAIMSFDVMDNHGI-EKDVVAVNSLLSSICCEENQ 191
R F+S F C+ AG +EA FD + G+ + N LL +I
Sbjct: 134 NSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAI---SKS 190
Query: 192 TSTAMEFFEEVKGKIAPDG---DSFAI--LLEGWEKEGNAAKAKTTFGEMVIRVGWSKEN 246
S+++E E ++ G D F + +L+ + G + +A + F E++ R GW E+
Sbjct: 191 NSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSR-GWLDEH 249
Query: 247 VMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWD 306
+ +++ + Q+++ ++++++ D K + + FVKE+ A L++
Sbjct: 250 IST--ILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFE 307
Query: 307 AMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDS-------------- 352
M G+ ++ +Y+ +IG C + +++ A L E+ G PD
Sbjct: 308 KMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEES 367
Query: 353 -------------------LTYNMIFKCLVRNKKVRETESFFAEMVKNEWP--------- 384
L Y +F+ +RN V E SF ++ N
Sbjct: 368 ELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKL 427
Query: 385 ---------PTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSL 435
P S + + I L + + A + +V+N + P N ++ G+C
Sbjct: 428 LKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKE 487
Query: 436 SRFSEVRRHAEDMLDRRIIIYESTMN 461
R E + +M D + + T+N
Sbjct: 488 GRSEESLKLLGEMKDAGVEPSQFTLN 513
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 107/271 (39%), Gaps = 18/271 (6%)
Query: 176 VAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFG 234
+ +N L+ + N+ A+ + V+ + P + ++EG KEG + ++ G
Sbjct: 444 IVINCLVKA-----NKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLG 498
Query: 235 EMVIRVGWSKENVMAYDAFLLTLLRASQIEE-----VLRFLKVMKDHDCFPGLKFFTYAL 289
EM K+ + F L + E L LK M+ + P +K T+ +
Sbjct: 499 EM-------KDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLV 551
Query: 290 DVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAF 349
+ A A D + G + +++ A I N VD L ++ +G
Sbjct: 552 KKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHC 611
Query: 350 PDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEI 409
PD + Y+++ K L + + E + F EMV PT + + I + +
Sbjct: 612 PDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSC 671
Query: 410 WSYMVENHVKPLHESANALLIGICSLSRFSE 440
M E+ P + +L+ G+C+ R SE
Sbjct: 672 IVRMYEDEKNPDVITYTSLIHGLCASGRPSE 702
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 8/216 (3%)
Query: 174 DVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTF 233
DV+A + L+ ++C + F E V + P ++ +++GW KEG + +
Sbjct: 613 DVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSC- 671
Query: 234 GEMVIRVGWSKEN--VMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDV 291
++R+ ++N V+ Y + + L + + E + MK DC+P F +
Sbjct: 672 ---IVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQG 728
Query: 292 FVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPD 351
K + A+ + M + P+ +Y +++ ++ ++ F + EMV G FP
Sbjct: 729 LCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPV 788
Query: 352 SLTYNMIFKCLVRNKKVRE--TESFFAEMVKNEWPP 385
S+ N + V +K V + T + ++K+ P
Sbjct: 789 SVDRNYMLAVNVTSKFVEDLRTSCYLTCLIKDGRIP 824
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/403 (20%), Positives = 158/403 (39%), Gaps = 16/403 (3%)
Query: 87 YPHSAVKFFRWAGRLQ--KHSPHAWNLMVDLLGKNELFDPMWDAIRSMK------QEGVL 138
Y H F WA L +H ++ M L FD ++ + + G+
Sbjct: 92 YAHYDFAVFNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSSGIF 151
Query: 139 TLR----TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTST 194
+ F SA +YC A + + A+++FD M K V V + + + +
Sbjct: 152 SCPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDK 211
Query: 195 AMEFFEEV-KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAF 253
A+ F++ + K + PD +F IL+ G+ + A F EM + + NV++++
Sbjct: 212 ALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREM--KEKGCEPNVVSFNTL 269
Query: 254 LLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGI 313
+ L + +IEE ++ M + C +D +E A L ++ +
Sbjct: 270 IRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRV 329
Query: 314 MPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETES 373
+P+ Y +++ C + A +++E+ G P + + + L ++ + +
Sbjct: 330 LPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASG 389
Query: 374 FFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGIC 433
F +M+ P S + L D A+ + +P + + L+ G
Sbjct: 390 FMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFT 449
Query: 434 SLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR-SRK 475
R E +MLD+ ++ T N+L D G+ SRK
Sbjct: 450 KEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRK 492
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 173/416 (41%), Gaps = 65/416 (15%)
Query: 33 FPTHLDTPNVSPVAR----TLCNLL--TRTSP-PEIETALTSSGIHPSDDCVREVLKLSY 85
F T L ++P+ + +C +L + SP + + L+S+ + + L++
Sbjct: 29 FSTELTPTTITPINQDHLLRVCTILYQQQNSPDSRLVSKLSSTKFQLTHEFF---LQVCN 85
Query: 86 NYPHSAVKFFRWAGRLQKHSPH------AWNLMVDLLGKNELFDPMWDAIRSMKQEGVLT 139
N+P S R+ Q H P N M+ ++G + D W+ + + + G++
Sbjct: 86 NFPLSWRPVHRFFLYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVN 145
Query: 140 LRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFF 199
+TF ++ A + + F +M+ G +V +N + ++ C+E A F
Sbjct: 146 DKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETL-CKEKLVEEAKFVF 204
Query: 200 EEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLR 259
++K I PD ++ +++G+ G+ +A W N+M + F
Sbjct: 205 IKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKL---------W---NLMMDEGF------ 246
Query: 260 ASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVA--GGIMPNL 317
D D G K ++ +K+N A ++ MV+ GG +
Sbjct: 247 ---------------DVDIEAGKKI----METLLKKNQFDEASKVFYVMVSKRGGDLDGG 287
Query: 318 IMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTY-NMIFKCLVRNKKVRETESF-F 375
Y MI C NG +D A ++ DEM G + D+LT+ ++I+ LV+ + V E++
Sbjct: 288 F-YRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVV---EAYGL 343
Query: 376 AEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIG 431
E V+N P S I L A E++ M++ +P+ + LL G
Sbjct: 344 VEGVEN---PDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQG 396
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 135/327 (41%), Gaps = 15/327 (4%)
Query: 110 NLMVDLLGKNELFDPMWD----AIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDV 165
N ++ K+++ D +W AI +T+R + Q C GR E + D+
Sbjct: 203 NTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMI---QVLCKEGRLKEVV---DL 256
Query: 166 MDNHGIEKDV--VAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEK 222
+D ++ + V VN+ L EE + +M + + K + D ++I++ K
Sbjct: 257 LDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAK 316
Query: 223 EGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGL 282
EG+ A+ F EM+ R G+S N Y F+ ++E R L M++ P
Sbjct: 317 EGDLVSARKVFDEMLQR-GFSA-NSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYD 374
Query: 283 KFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDE 342
+ F + F + + + MV G+MP+ +N M+ V+ A +L +
Sbjct: 375 ETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTK 434
Query: 343 MVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDD 402
+ G PD TY+ + + + + + F EM + P + I L C
Sbjct: 435 SIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGK 494
Query: 403 PEAAHEIWSYMVENHVKPLHESANALL 429
EA + M + ++P + +AL+
Sbjct: 495 VEAGEKYLKIMKKRLIEPNADIYDALI 521
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 102/478 (21%), Positives = 191/478 (39%), Gaps = 100/478 (20%)
Query: 79 EVLKLSYNYPHSAVKFFRWAGRL---QKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQE 135
++LK N P +A+K F A H+ + M+D+LGK+ M I MK++
Sbjct: 17 QILKKQKN-PVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERMKED 75
Query: 136 GV-LTLRTFVSAFQSYCVAGRFNEAI---------------MSFDVMDNHGIEKD----- 174
F S +++ AGR +AI +SFD + +++
Sbjct: 76 SCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAA 135
Query: 175 ----------------VVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILL 217
+ A+N LL + C+ N++ A + F+E+ + PD DS+ IL+
Sbjct: 136 CHIFRKYCYGWEVNSRITALN-LLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILM 194
Query: 218 EGWEKEGNAAKAKTTFGEMVIRVGW--SKENVMAYDAFLLTLLRASQIEEVLRFL-KVMK 274
+G+ EG +A M R+ S E+++ Y L L A ++++ + L K+++
Sbjct: 195 KGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILR 254
Query: 275 D-----HDCF-------------------------------PGLKFFT-YALDVFVKEND 297
C+ P L ++ A D+F +E
Sbjct: 255 KGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLF-EEGK 313
Query: 298 AAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHG-AFPDSLTYN 356
+ AM + G P +Y A + C G++ A ++++ ++ G P YN
Sbjct: 314 LVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYN 373
Query: 357 MIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAA---AIAMLFD--CDDP---EAAHE 408
++ K L + K E + +M K +C A L D C D EA+
Sbjct: 374 VLIKGLCDDGKSMEAVGYLKKMSKQ------VSCVANEETYQTLVDGLCRDGQFLEASQV 427
Query: 409 IWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDA 466
+ ++++H P E+ + ++ G+C + R E E+M+ + ++ S L ++
Sbjct: 428 MEEMLIKSHF-PGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAES 484
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 6/207 (2%)
Query: 176 VAVNSLLSSICCEENQTSTAMEFFEEVKGKI---APDGDSFAILLEGWEKEGNAAKAKTT 232
V SLLS I ++ TA++ FEE K + +G +A +++ K + K
Sbjct: 9 VLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYV 68
Query: 233 FGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVF 292
M K++V A + + T RA ++E+ + K + + +C F L
Sbjct: 69 IERMKEDSCECKDSVFA--SVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEM 126
Query: 293 VKENDAAHAIPLWDAMVAG-GIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPD 351
VKE++ A ++ G + + N ++ + C D A ++ EM G +PD
Sbjct: 127 VKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPD 186
Query: 352 SLTYNMIFKCLVRNKKVRETESFFAEM 378
+Y ++ K K+ E M
Sbjct: 187 RDSYRILMKGFCLEGKLEEATHLLYSM 213
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 102/478 (21%), Positives = 191/478 (39%), Gaps = 100/478 (20%)
Query: 79 EVLKLSYNYPHSAVKFFRWAGRL---QKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQE 135
++LK N P +A+K F A H+ + M+D+LGK+ M I MK++
Sbjct: 17 QILKKQKN-PVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERMKED 75
Query: 136 GV-LTLRTFVSAFQSYCVAGRFNEAI---------------MSFDVMDNHGIEKD----- 174
F S +++ AGR +AI +SFD + +++
Sbjct: 76 SCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAA 135
Query: 175 ----------------VVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILL 217
+ A+N LL + C+ N++ A + F+E+ + PD DS+ IL+
Sbjct: 136 CHIFRKYCYGWEVNSRITALN-LLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILM 194
Query: 218 EGWEKEGNAAKAKTTFGEMVIRVGW--SKENVMAYDAFLLTLLRASQIEEVLRFL-KVMK 274
+G+ EG +A M R+ S E+++ Y L L A ++++ + L K+++
Sbjct: 195 KGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILR 254
Query: 275 D-----HDCF-------------------------------PGLKFFT-YALDVFVKEND 297
C+ P L ++ A D+F +E
Sbjct: 255 KGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLF-EEGK 313
Query: 298 AAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHG-AFPDSLTYN 356
+ AM + G P +Y A + C G++ A ++++ ++ G P YN
Sbjct: 314 LVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYN 373
Query: 357 MIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAA---AIAMLFD--CDDP---EAAHE 408
++ K L + K E + +M K +C A L D C D EA+
Sbjct: 374 VLIKGLCDDGKSMEAVGYLKKMSKQ------VSCVANEETYQTLVDGLCRDGQFLEASQV 427
Query: 409 IWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDA 466
+ ++++H P E+ + ++ G+C + R E E+M+ + ++ S L ++
Sbjct: 428 MEEMLIKSHF-PGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAES 484
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 6/207 (2%)
Query: 176 VAVNSLLSSICCEENQTSTAMEFFEEVKGKI---APDGDSFAILLEGWEKEGNAAKAKTT 232
V SLLS I ++ TA++ FEE K + +G +A +++ K + K
Sbjct: 9 VLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYV 68
Query: 233 FGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVF 292
M K++V A + + T RA ++E+ + K + + +C F L
Sbjct: 69 IERMKEDSCECKDSVFA--SVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEM 126
Query: 293 VKENDAAHAIPLWDAMVAG-GIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPD 351
VKE++ A ++ G + + N ++ + C D A ++ EM G +PD
Sbjct: 127 VKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPD 186
Query: 352 SLTYNMIFKCLVRNKKVRETESFFAEM 378
+Y ++ K K+ E M
Sbjct: 187 RDSYRILMKGFCLEGKLEEATHLLYSM 213
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/350 (18%), Positives = 137/350 (39%), Gaps = 37/350 (10%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
T+ C G+ EA+ ++M E + V N +++ +C ++ + A+E E
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLC-KDGLVADAVEIVEL 377
Query: 202 VKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTL--- 257
+K + PD ++ ILL G +G+ +A M+ ++ +V++Y+A + L
Sbjct: 378 MKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKE 437
Query: 258 --------------------------------LRASQIEEVLRFLKVMKDHDCFPGLKFF 285
L+A + + + K + D +
Sbjct: 438 NRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTY 497
Query: 286 TYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVL 345
T +D F K A L M + P++ YN ++ C G +D A+RL +EM
Sbjct: 498 TAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQR 557
Query: 346 HGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEA 405
FPD +++N++ ++ ++ ES M + P + I +
Sbjct: 558 DNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDE 617
Query: 406 AHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIII 455
A + MV++ +P +++L S ++ + ++D+ I++
Sbjct: 618 AISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVL 667
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 99/238 (41%), Gaps = 2/238 (0%)
Query: 215 ILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMK 274
ILL+G + KA + EM R +V +Y+ + ++E+ L MK
Sbjct: 147 ILLKGLCRNLECGKAVSLLREM--RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 275 DHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVD 334
C L + +D F K A+ M G+ +L++Y ++I C+ GE+D
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 335 NAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAI 394
L DE++ G P ++TYN + + + +++E F M++ P I
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 395 AMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRR 452
L + A ++ + M+E +P + N ++ +C ++ E M RR
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/366 (19%), Positives = 144/366 (39%), Gaps = 7/366 (1%)
Query: 110 NLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMDN 168
N+++ L +N +R M++ ++ + ++ + + +C +A+ + M
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205
Query: 169 HGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK-GKIAPDGDSFAILLEGWEKEGNAA 227
G +V L+ + C + + AM F +E+K + D + L+ G+ G
Sbjct: 206 SGCSWSLVTWGILIDAFC-KAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 228 KAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTY 287
+ K F E++ R + Y+ + + Q++E + M + P + +T
Sbjct: 265 RGKALFDEVLER--GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322
Query: 288 ALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHG 347
+D A+ L + M+ PN + YN +I C +G V +A +++ M
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382
Query: 348 AFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE--WPPTSSNCAAAIAMLFDCDDPEA 405
PD++TYN++ L + E M+K+ P + A I L +
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQ 442
Query: 406 AHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKD 465
A +I+ +VE + N LL ++ + + D +I+ T + D
Sbjct: 443 ALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMID 502
Query: 466 AFYTEG 471
F G
Sbjct: 503 GFCKTG 508
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 78/199 (39%), Gaps = 4/199 (2%)
Query: 281 GLKFFTYALDVFVK----ENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNA 336
G F Y ++ +K + A+ L M +MP++ YN +I C E++ A
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 337 FRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAM 396
L +EM G +T+ ++ + K+ E F EM + I
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 397 LFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIY 456
DC + + ++ ++E P + N L+ G C L + E E M++R +
Sbjct: 257 FCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPN 316
Query: 457 ESTMNKLKDAFYTEGRSRK 475
T L D G++++
Sbjct: 317 VYTYTGLIDGLCGVGKTKE 335
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 16/254 (6%)
Query: 140 LRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFF 199
L T+ +YC +A F+ M ++ DVV + LL+S E ME F
Sbjct: 635 LFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSD--PELDMKREMEAF 692
Query: 200 EEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLR 259
+ + PD + I++ + + K F +M K + D T+L
Sbjct: 693 D-----VIPDVVYYTIMINRYCHLNDLKKVYALFKDM-------KRREIVPDVVTYTVLL 740
Query: 260 ASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIM 319
++ E L + MK D P + ++T +D K D A ++D M+ G+ P+
Sbjct: 741 KNKPERNLS--REMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAP 798
Query: 320 YNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMV 379
Y A+I C G + A + D M+ G PD + Y + RN V + EM+
Sbjct: 799 YTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEML 858
Query: 380 KNEWPPTSSNCAAA 393
+ PT ++ +A
Sbjct: 859 EKGIKPTKASLSAV 872
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 129/329 (39%), Gaps = 40/329 (12%)
Query: 130 RSMKQEGVLTLRTFVSAFQSYCVAGRF-NEAIMSFDVMDNHGIEKDVVAVNSLLSSICCE 188
R ++ E L + + F S C + ++A D M G+E + L+ + C
Sbjct: 554 RFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGA-WCR 612
Query: 189 ENQTSTAMEFFE-EVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENV 247
N A EFFE V KI PD ++ I++ + + +A F +M R K +V
Sbjct: 613 VNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRR--DVKPDV 670
Query: 248 MAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDA 307
+ Y L + + L + M+ D P + ++T ++ + ND L+
Sbjct: 671 VTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKD 723
Query: 308 MVAGGIMPNLIMYNAM----------------------------IGLQCNNGEVDNAFRL 339
M I+P+++ Y + I QC G++ A R+
Sbjct: 724 MKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRI 783
Query: 340 LDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFD 399
D+M+ G PD+ Y + C + ++E + F M+++ P A IA
Sbjct: 784 FDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCR 843
Query: 400 CDDPEAAHEIWSYMVENHVKPLHESANAL 428
A ++ M+E +KP S +A+
Sbjct: 844 NGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 98/259 (37%), Gaps = 6/259 (2%)
Query: 176 VAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGE 235
+A ++ +C E + K I PD ++ ++EG K N KA F +
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 236 MVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKE 295
M+ + + N + + L + E K ++ + + A D K
Sbjct: 352 MLKK--RKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKL 409
Query: 296 NDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTY 355
AI L+ M GI P++I Y +IG C G+ +AF L+ EM G PD + Y
Sbjct: 410 GKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIY 469
Query: 356 NMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVE 415
N++ L N +E M PT I L D + + A + +
Sbjct: 470 NVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEH 529
Query: 416 NHVKPLHESANALLIGICS 434
E+ +++ G C+
Sbjct: 530 KS----RENDASMVKGFCA 544
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 137/338 (40%), Gaps = 41/338 (12%)
Query: 145 SAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-K 203
S + +C AG + A F ++ + K V +L +S+C E++ S A + + + K
Sbjct: 537 SMVKGFCAAGCLDHAFERFIRLE-FPLPKSVYF--TLFTSLCAEKDYISKAQDLLDRMWK 593
Query: 204 GKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQI 263
+ P+ + L+ W + N KA+ F +V + ++ Y + T R ++
Sbjct: 594 LGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTK--KIVPDLFTYTIMINTYCRLNEP 651
Query: 264 EEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAM 323
++ + MK D P + ++ L+ + + + M A ++P+++ Y M
Sbjct: 652 KQAYALFEDMKRRDVKPDVVTYSVLLN-------SDPELDMKREMEAFDVIPDVVYYTIM 704
Query: 324 IGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESF--------- 374
I C+ ++ + L +M PD +TY ++ K RE ++F
Sbjct: 705 INRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYY 764
Query: 375 -------------------FAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVE 415
F +M+++ P ++ A IA + A I+ M+E
Sbjct: 765 TVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIE 824
Query: 416 NHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRI 453
+ VKP AL+ G C + + ++ML++ I
Sbjct: 825 SGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGI 862
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 112/295 (37%), Gaps = 34/295 (11%)
Query: 122 FDPMWDAIRSMKQEGVLTLRT-FVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNS 180
F +D + ++ + R + AF + G+ EAI F M GI DV+ +
Sbjct: 377 FSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTT 436
Query: 181 LLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIR 239
L+ CC + + S A + E+ G PD + +L G G A +A T M R
Sbjct: 437 LIGG-CCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENR 495
Query: 240 VGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMK--------------------DHDC- 278
K + ++ + L+ A ++++ F + ++ DH
Sbjct: 496 --GVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFE 553
Query: 279 --------FPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNN 330
P +FT + +++ + A L D M G+ P MY +IG C
Sbjct: 554 RFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRV 613
Query: 331 GEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPP 385
V A + +V PD TY ++ R + ++ + F +M + + P
Sbjct: 614 NNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKP 668
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 114/311 (36%), Gaps = 43/311 (13%)
Query: 145 SAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG 204
S Q YC G F+EA F I D V N ++ + + A+E F E+ G
Sbjct: 366 SILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALG-KLGKVEEAIELFREMTG 424
Query: 205 K-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKE-NVMAYDAFLLTLLRASQ 262
K IAPD ++ L+ G +G + A F M+ G K +++ Y+ L
Sbjct: 425 KGIAPDVINYTTLIGGCCLQGKCSDA---FDLMIEMDGTGKTPDIVIYNVLAGGLATNGL 481
Query: 263 IEEVLRFLKVMKDHDCFP----------GL---------KFFTYALDVFVKENDAAHAIP 303
+E LK+M++ P GL + F +L+ +ENDA+
Sbjct: 482 AQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDAS---- 537
Query: 304 LWDAMVAGGIM--------------PNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAF 349
+ A G + P + + L + A LLD M G
Sbjct: 538 MVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVE 597
Query: 350 PDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEI 409
P+ Y + R VR+ FF +V + P I ++P+ A+ +
Sbjct: 598 PEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYAL 657
Query: 410 WSYMVENHVKP 420
+ M VKP
Sbjct: 658 FEDMKRRDVKP 668
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 128/335 (38%), Gaps = 39/335 (11%)
Query: 138 LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAME 197
L + T+ S Y + G +M G+ ++VV SL+ C ++ A
Sbjct: 259 LNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYC-KKGLMEEAEH 317
Query: 198 FFEEVK-GKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLT 256
FE +K K+ D + +L++G+ + G A M I +G + N ++ +
Sbjct: 318 VFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNM-IEIG-VRTNTTICNSLING 375
Query: 257 LLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPN 316
++ Q+ E A +F + ND W + P+
Sbjct: 376 YCKSGQLVE----------------------AEQIFSRMND-------WS------LKPD 400
Query: 317 LIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFA 376
YN ++ C G VD A +L D+M P +TYN++ K R + S +
Sbjct: 401 HHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWK 460
Query: 377 EMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLS 436
M+K +C+ + LF D A ++W ++ + + N ++ G+C +
Sbjct: 461 MMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKME 520
Query: 437 RFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEG 471
+ +E + +++ R T L +Y G
Sbjct: 521 KVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVG 555
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 21/284 (7%)
Query: 109 WNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMD 167
+N ++ K + + D + ++ G+ T+ T+ + +C G ++A + M
Sbjct: 579 YNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMI 638
Query: 168 NHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAA 227
GI +V +IC + + ++ +E + D F +LL G++
Sbjct: 639 EKGITLNV--------NICSKIANSLFRLDKIDEACLLLQKIVD-FDLLLPGYQSLKEFL 689
Query: 228 KAKTTFGEMVIRVGWSKENV----------MAYDAFLLTLLRASQIEEVLRFLKVMKDHD 277
+A T ++ S EN + Y+ + L +A ++E+ + + D
Sbjct: 690 EASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSD 749
Query: 278 CF-PGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNA 336
F P +T + D A L D M GI+PN++ YNA+I C G VD A
Sbjct: 750 RFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRA 809
Query: 337 FRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
RLL ++ G P+++TYN + LV++ V E +M++
Sbjct: 810 QRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIE 853
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/438 (18%), Positives = 169/438 (38%), Gaps = 62/438 (14%)
Query: 73 SDDCVREVLKLSYNYPHSAVKFFRWAGRLQKHSP--HAWNLMVDLLGKNELFDP------ 124
SD+ + +L+ P + ++ F A + QK P A+ MV +L + +
Sbjct: 69 SDELLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLC 128
Query: 125 -----------MWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEK 173
+W + + +E + F + Y G A+ FD M N+G
Sbjct: 129 ELVALNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYG-RI 187
Query: 174 DVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNAAKAKTT 232
+ + L S + + A+ +++ + +++PD + +I++ + + GN KA
Sbjct: 188 PSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVF 247
Query: 233 FGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVF 292
E +G + NV+ Y++ + +E + R L++M + + +T + +
Sbjct: 248 AKETESSLGL-ELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGY 306
Query: 293 VKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDS 352
K+ A +++ + ++ + MY ++ C G++ +A R+ D M+ G ++
Sbjct: 307 CKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNT 366
Query: 353 LTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSY 412
N + ++ ++ E E F+ M N+W
Sbjct: 367 TICNSLINGYCKSGQLVEAEQIFSRM--NDWS---------------------------- 396
Query: 413 MVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR 472
+KP H + N L+ G C E + + M + ++ T N L +G
Sbjct: 397 -----LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNIL-----LKGY 446
Query: 473 SRKDRFDSLFRRWKARVK 490
SR F + WK +K
Sbjct: 447 SRIGAFHDVLSLWKMMLK 464
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 137/352 (38%), Gaps = 8/352 (2%)
Query: 103 KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIM 161
K H +N +VD + D M Q+ V+ T+ T+ + Y G F++ +
Sbjct: 398 KPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLS 457
Query: 162 SFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGW 220
+ +M G+ D ++ ++LL ++ + + AM+ +E V + + D + +++ G
Sbjct: 458 LWKMMLKRGVNADEISCSTLLEALF-KLGDFNEAMKLWENVLARGLLTDTITLNVMISGL 516
Query: 221 EKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFP 280
K +AK + + K V Y A + ++E + M+ FP
Sbjct: 517 CKMEKVNEAKEILDN--VNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFP 574
Query: 281 GLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLL 340
++ + + K L + A G+ P + Y A+I CN G +D A+
Sbjct: 575 TIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATC 634
Query: 341 DEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE--WPPTSSNCAAAIAMLF 398
EM+ G + + I L R K+ E ++V + P S A
Sbjct: 635 FEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASAT 694
Query: 399 DC-DDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDML 449
C + A + + + + P + N + G+C + + R+ D+L
Sbjct: 695 TCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLL 746
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 129/295 (43%), Gaps = 16/295 (5%)
Query: 90 SAVKFFRWAGRLQKHSPHAWNL--------MVDLLGKNELFDPMWDAIRSMKQEGVLTLR 141
+A K F W + + N+ +++L G+ +F+ M +
Sbjct: 82 AAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTA 141
Query: 142 TFVSAFQSYCV-AGRFN--EAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEF 198
+A + CV + +F+ E I ++ IE DV + N+L+ +C + + T A+
Sbjct: 142 LSFNALLNACVNSKKFDLVEGIFK-ELPGKLSIEPDVASYNTLIKGLCGKGSFTE-AVAL 199
Query: 199 FEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTL 257
+E++ K + PD +F ILL +G + + + MV + K ++ +Y+A LL L
Sbjct: 200 IDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKN--VKRDIRSYNARLLGL 257
Query: 258 LRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNL 317
++ EE++ +K ++ P + FT + FV E AI + + G P
Sbjct: 258 AMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLK 317
Query: 318 IMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETE 372
++N+++ C G++++A+ L E+ D + LV+ K E E
Sbjct: 318 FVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAE 372
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 152/398 (38%), Gaps = 50/398 (12%)
Query: 41 NVSPVARTLCNLLTRTSPPEIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGR 100
N S VA+ + + PE+ET L P+ + + LK+ +A+ FRWA +
Sbjct: 139 NASSVAKIVEVVQRWKWGPELETQLDKLQFVPNMVHITQSLKIVKEV-DAALSLFRWAKK 197
Query: 101 LQKHSPH---------AWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYC 151
+ P N D +G LF+ M ++ G L+ + Q
Sbjct: 198 QPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEM---VQDSSSHGDLSFNAYNQVIQYLA 254
Query: 152 VAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGD 211
A + A F G + D N+L+ + + A E +E ++ D
Sbjct: 255 KAEKLEVAFCCFKKAQESGCKIDTQTYNNLMM-LFLNKGLPYKAFEIYESME-----KTD 308
Query: 212 SFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLK 271
S LL+G Y+ + +L ++ +++ + +
Sbjct: 309 S---LLDG----------------------------STYELIIPSLAKSGRLDAAFKLFQ 337
Query: 272 VMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNG 331
MK+ P F+ +D K ++ ++ M G P+ M+ ++I G
Sbjct: 338 QMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAG 397
Query: 332 EVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCA 391
++D A RL DEM G P+ Y MI + ++ K+ + F +M K + PT S +
Sbjct: 398 KLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYS 457
Query: 392 AAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALL 429
+ M ++A +I++ M ++P S +LL
Sbjct: 458 CLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLL 495
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 115/282 (40%), Gaps = 10/282 (3%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFE- 200
++ + +SY G+ N A F M + G E + +L + E ++ A E FE
Sbjct: 183 SYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFV-EGDKFKEAEEVFET 241
Query: 201 ---EVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTL 257
E K + PD + +++ ++K GN KA+ F MV + ++ + Y++ +
Sbjct: 242 LLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGK--GVPQSTVTYNSLMSF- 298
Query: 258 LRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNL 317
+ +EV + M+ D P + + + + + A+ +++ M+ G+ P
Sbjct: 299 --ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTH 356
Query: 318 IMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAE 377
YN ++ +G V+ A + M FPD +Y + V + E FF
Sbjct: 357 KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR 416
Query: 378 MVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVK 419
+ + + P I +D E E++ M + +K
Sbjct: 417 IKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIK 458
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 107/263 (40%), Gaps = 11/263 (4%)
Query: 150 YCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPD 209
Y AG + +A F M G+ + V NSL+S E + + + + + I PD
Sbjct: 264 YKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS---FETSYKEVSKIYDQMQRSDIQPD 320
Query: 210 GDSFAILLEGWEKEGNAAKAKTTFGEMV---IRVGWSKENVMAYDAFLLTLLRASQIEEV 266
S+A+L++ + + +A + F EM+ +R N++ DAF ++ +E+
Sbjct: 321 VVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL-LDAFAIS----GMVEQA 375
Query: 267 LRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGL 326
K M+ FP L +T L +V +D A + + G PN++ Y +I
Sbjct: 376 KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG 435
Query: 327 QCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPT 386
+V+ + ++M L G + I R K ++ EM PP
Sbjct: 436 YAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPD 495
Query: 387 SSNCAAAIAMLFDCDDPEAAHEI 409
+++ D+ E A E+
Sbjct: 496 QKAKNVLLSLASTQDELEEAKEL 518
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 115/282 (40%), Gaps = 10/282 (3%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFE- 200
++ + +SY G+ N A F M + G E + +L + E ++ A E FE
Sbjct: 176 SYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFV-EGDKFKEAEEVFET 234
Query: 201 ---EVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTL 257
E K + PD + +++ ++K GN KA+ F MV + ++ + Y++ +
Sbjct: 235 LLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGK--GVPQSTVTYNSLMSF- 291
Query: 258 LRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNL 317
+ +EV + M+ D P + + + + + A+ +++ M+ G+ P
Sbjct: 292 --ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTH 349
Query: 318 IMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAE 377
YN ++ +G V+ A + M FPD +Y + V + E FF
Sbjct: 350 KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR 409
Query: 378 MVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVK 419
+ + + P I +D E E++ M + +K
Sbjct: 410 IKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIK 451
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 107/263 (40%), Gaps = 11/263 (4%)
Query: 150 YCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPD 209
Y AG + +A F M G+ + V NSL+S E + + + + + I PD
Sbjct: 257 YKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS---FETSYKEVSKIYDQMQRSDIQPD 313
Query: 210 GDSFAILLEGWEKEGNAAKAKTTFGEMV---IRVGWSKENVMAYDAFLLTLLRASQIEEV 266
S+A+L++ + + +A + F EM+ +R N++ DAF ++ +E+
Sbjct: 314 VVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL-LDAFAIS----GMVEQA 368
Query: 267 LRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGL 326
K M+ FP L +T L +V +D A + + G PN++ Y +I
Sbjct: 369 KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG 428
Query: 327 QCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPT 386
+V+ + ++M L G + I R K ++ EM PP
Sbjct: 429 YAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPD 488
Query: 387 SSNCAAAIAMLFDCDDPEAAHEI 409
+++ D+ E A E+
Sbjct: 489 QKAKNVLLSLASTQDELEEAKEL 511
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 104/233 (44%), Gaps = 4/233 (1%)
Query: 147 FQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK-GK 205
+ C +G A M G+ DV N+L+S++C +E + A + ++ G
Sbjct: 307 IRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALC-KEGKFDEACDLHGTMQNGG 365
Query: 206 IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEE 265
+APD S+ ++++G G+ +A F +++ E V+ ++ + R
Sbjct: 366 VAPDQISYKVIIQGLCIHGDVNRA-NEFLLSMLKSSLLPE-VLLWNVVIDGYGRYGDTSS 423
Query: 266 VLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIG 325
L L +M + P + + +VK A + + M + I P+ YN ++G
Sbjct: 424 ALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLG 483
Query: 326 LQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEM 378
C G + AF+L DEM+ G PD +TY + + L ++++ ES + +
Sbjct: 484 AACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRI 536
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 95/232 (40%), Gaps = 2/232 (0%)
Query: 154 GRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSF 213
G +A+ + M + D V N ++ +C N + + VK + PD ++
Sbjct: 279 GNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTY 338
Query: 214 AILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVM 273
L+ KEG +A G M + G + ++Y + L + FL M
Sbjct: 339 NTLISALCKEGKFDEACDLHGTM--QNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSM 396
Query: 274 KDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEV 333
P + + +D + + D + A+ + + M++ G+ PN+ NA+I G +
Sbjct: 397 LKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRL 456
Query: 334 DNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPP 385
+A+ + +EM PD+ TYN++ +R + EM++ P
Sbjct: 457 IDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQP 508
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 93/423 (21%), Positives = 150/423 (35%), Gaps = 33/423 (7%)
Query: 93 KFFRWAGRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYC 151
K F + L HS ++M DL + +L +W + M GV+ L T C
Sbjct: 113 KSFDYDDCLSIHS----SIMRDLCLQGKLDAALW-LRKKMIYSGVIPGLITHNHLLNGLC 167
Query: 152 VAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGD 211
AG +A M G + V+ N+L+ +C N F K I P+
Sbjct: 168 KAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRV 227
Query: 212 SFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLL-----RASQIEEV 266
+ I++ ++G E ++ S + D + T+L + + +
Sbjct: 228 TCNIIVHALCQKGVIGNNNKKLLEEILD---SSQANAPLDIVICTILMDSCFKNGNVVQA 284
Query: 267 LRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGL 326
L K M + + + + A MV G+ P++ YN +I
Sbjct: 285 LEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISA 344
Query: 327 QCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPT 386
C G+ D A L M G PD ++Y +I + L + V F M+K+ P
Sbjct: 345 LCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPE 404
Query: 387 SSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAE 446
I D +A + + M+ VKP + NAL+ G R +
Sbjct: 405 VLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKN 464
Query: 447 DMLDRRIIIYESTMNKLKDAFYTEGRSRK--DRFDSLFRR-----------------WKA 487
+M +I +T N L A T G R +D + RR WK
Sbjct: 465 EMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKG 524
Query: 488 RVK 490
R+K
Sbjct: 525 RLK 527
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 134/359 (37%), Gaps = 42/359 (11%)
Query: 94 FFRWAGRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFV---SAFQSY 150
FFRW ++P +L N LF + D + L F + + Y
Sbjct: 99 FFRWLCSNYDYTPGPVSL-------NILFGALLDGKAVKAAKSFLDTTGFKPEPTLLEQY 151
Query: 151 --CVA--GRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKI 206
C++ G EAI ++V+ + GI VV NS+L C + + F+E K +
Sbjct: 152 VKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLG-CLKARKLD---RFWELHKEMV 207
Query: 207 APDGDSFAI------------LLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFL 254
+ DS I + EG+E K G+ V Y +
Sbjct: 208 ESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYV------------YAKLI 255
Query: 255 LTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIM 314
+ L M + FP + + + A ++ + G
Sbjct: 256 SGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYA 315
Query: 315 PNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESF 374
P+ ++Y MI C G + +A +L EM+ G P+ YN++ + ++ E+F
Sbjct: 316 PDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAF 375
Query: 375 FAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGIC 433
+ EM++N + T +C I + A EI+ M E V P + NAL+ G C
Sbjct: 376 YNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFC 434
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 8/192 (4%)
Query: 181 LLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIR 239
++ +C + Q A F+ +K K APD + ++ G+ ++G A+ + EM+ +
Sbjct: 289 IIKGLCMNKKQLE-AYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKK 347
Query: 240 VGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAA 299
+ N AY+ + + +I V F M + + + F +
Sbjct: 348 --GMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSD 405
Query: 300 HAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIF 359
A ++ M G+ PN I YNA+I C +V+ +L E+ G P + Y
Sbjct: 406 EAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAY---- 461
Query: 360 KCLVRNKKVRET 371
LVRN K+ ++
Sbjct: 462 AALVRNLKMSDS 473
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 158/408 (38%), Gaps = 10/408 (2%)
Query: 75 DCVREVLKLSYN-YPHSAVKFFRWAGRLQK---HSPHAWNLMVDLLGKNELFDPMWDAIR 130
+CV ++ + + + S + F+ W LQ+ SP A +++ LLG+ + D + +
Sbjct: 204 ECVEALVMMGESGFVKSCLYFYEWMS-LQEPSLASPRACSVLFTLLGRERMADYILLLLS 262
Query: 131 SM-KQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEE 189
++ +E +R + +A + R+++A ++ MD + D V L++++
Sbjct: 263 NLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAG 322
Query: 190 NQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVM 248
E FE++ K + D F L++ + EG +A EM + + N +
Sbjct: 323 RSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKK--GIRSNTI 380
Query: 249 AYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAM 308
Y+ + +++ IEEV M+D P + +D + + L M
Sbjct: 381 VYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREM 440
Query: 309 VAGGIMPNLIMYNAMIGLQCNNGEV-DNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKK 367
G+ PN+ Y +I ++ D A M G P S +Y + +
Sbjct: 441 EDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGW 500
Query: 368 VRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANA 427
+ + F EM K P+ + + D EIW M+ +K + N
Sbjct: 501 HEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNT 560
Query: 428 LLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGRSRK 475
LL G + E R + + T N L +A+ G+ K
Sbjct: 561 LLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAK 608
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 122/332 (36%), Gaps = 37/332 (11%)
Query: 125 MWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLS 183
+W+ M ++GV + F +S+C G EA++ M+ GI + + N+L+
Sbjct: 328 VWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMD 387
Query: 184 SICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEM------ 236
+ + N F E++ K + P ++ IL++ + + +T EM
Sbjct: 388 AYN-KSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLE 446
Query: 237 ---------VIRVGWSKE-NVMAYDAFL--------------LTLLRASQI----EEVLR 268
+ G +K+ + MA DAFL L+ A + E+
Sbjct: 447 PNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYA 506
Query: 269 FLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQC 328
+ M P ++ +T LD F + D + +W M+ I I YN ++
Sbjct: 507 SFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFA 566
Query: 329 NNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSS 388
G A ++ E G P +TYNM+ R + + EM P S
Sbjct: 567 KQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSI 626
Query: 389 NCAAAIAMLFDCDDPEAAHEIWSYMVENHVKP 420
+ I D + A MV++ P
Sbjct: 627 TYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVP 658
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 114/278 (41%), Gaps = 21/278 (7%)
Query: 166 MDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAILLEGWEKEG 224
M++ G+E +V + L+S+ + + A + F +K + P S+ L+ + G
Sbjct: 440 MEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSG 499
Query: 225 NAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKF 284
KA +F EM + G K +V Y + L R+ +++ K+M
Sbjct: 500 WHEKAYASFEEMC-KEGI-KPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRIT 557
Query: 285 FTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMV 344
+ LD F K+ A + G+ P+++ YN ++ G+ +LL EM
Sbjct: 558 YNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMA 617
Query: 345 LHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPE 404
PDS+TY+ + VR + + + MVK+ P DP
Sbjct: 618 ALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVP----------------DPR 661
Query: 405 AAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVR 442
++E ++E+ K + ++GI + S+F V+
Sbjct: 662 -SYEKLRAILEDKAKTKNRKDKTAILGIIN-SKFGRVK 697
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/347 (19%), Positives = 142/347 (40%), Gaps = 8/347 (2%)
Query: 133 KQEGVLTLRTFVSAFQSYCVAGRFNEA-IMSFDVMDNHGIEKDVVAVNSLLSSICCEENQ 191
K+E V +L + C R +A + FD M N G DVV +L+ C E +
Sbjct: 155 KKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFD-MRNRGHLPDVVTFTTLIGGYC-EIRE 212
Query: 192 TSTAMEFFEEVK-GKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAY 250
A + F+E++ I P+ + ++L+ G+ K + + E+ + + M
Sbjct: 213 LEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKA 272
Query: 251 DAF---LLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDA 307
AF + ++ R ++ + M + + + +D + A +
Sbjct: 273 AAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYI 332
Query: 308 MVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKK 367
M + G+ P YNA+I C +G A++LL+E FP TY ++ + L +
Sbjct: 333 MKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELD 392
Query: 368 VRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANA 427
+ + M++ E + + L D+P + M++ +P + N
Sbjct: 393 TGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNT 452
Query: 428 LLIGICSLSRFSEVRRHAEDMLDRRIIIYES-TMNKLKDAFYTEGRS 473
++ G+C + R + + +DM+ + ++ T+N + +GR+
Sbjct: 453 VINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRA 499
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 103/258 (39%), Gaps = 4/258 (1%)
Query: 132 MKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQ 191
+++EG R + + CV E + M D +N++++ +C + +
Sbjct: 404 LRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLC-KMGR 462
Query: 192 TSTAMEFFEEV-KGKI-APDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMA 249
AM+ +++ GK APD + ++ G +G A +A V+ K V+A
Sbjct: 463 VDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNR-VMPENKIKPGVVA 521
Query: 250 YDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMV 309
Y+A + L + + +E + ++ + +D N A WD ++
Sbjct: 522 YNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVI 581
Query: 310 AGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVR 369
+ +Y A + C +G + +A L ++ GA P+ + YN + R+ R
Sbjct: 582 WPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKR 641
Query: 370 ETESFFAEMVKNEWPPTS 387
E EM KN P +
Sbjct: 642 EAYQILEEMRKNGQAPDA 659
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFD-VMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFE 200
T + C GR ++A+ D +M D V +N+++ + + + A++
Sbjct: 449 TLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLL-AQGRAEEALDVLN 507
Query: 201 EV--KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLL 258
V + KI P ++ ++ G K +A + FG++ K +V A ++
Sbjct: 508 RVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQL------EKASVTADSTTYAIII 561
Query: 259 RASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKE-------NDAAHAIPLWDAMVAG 311
+ + K D +P + + F+K +DA H L+D +G
Sbjct: 562 DGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHF--LYDLADSG 619
Query: 312 GIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFK 360
I PN++ YN +I +G A+++L+EM +G PD++T+ ++ K
Sbjct: 620 AI-PNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDK 667
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 128/316 (40%), Gaps = 40/316 (12%)
Query: 105 SPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAF-QSYCVAGRFNEAIMSF 163
S +A L V L K++ F + I S K + TF+S +SY A F+ A+ F
Sbjct: 66 SRYAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMF 125
Query: 164 DVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK---IAPDGDSFAILLEGW 220
+ MD G + VV+ N+LL++ C + + F+E + I PD S+ +L++ +
Sbjct: 126 EEMDKLGTPRTVVSFNALLAA-CLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSY 184
Query: 221 EKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFP 280
G KA +M V + ++A+ L +L + ++E M + C
Sbjct: 185 CDSGKPEKAMEIMRDM--EVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDL 242
Query: 281 GLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMI---------------- 324
+ L KE+ L + M + G+ P+ + YN ++
Sbjct: 243 DNTVYNVRLMNAAKES-PERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVY 301
Query: 325 -GLQ--------------CNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVR 369
GL+ C NG D + + + PD T + + LV+N ++
Sbjct: 302 EGLEQPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRME 361
Query: 370 ETESFFAEMVKNEWPP 385
+ A +VK ++PP
Sbjct: 362 DARG-VARIVKKKFPP 376
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 132/316 (41%), Gaps = 12/316 (3%)
Query: 88 PHSAVKFFRWAGRLQ-KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRT-FVS 145
P A+ F + +H +++ ++ L K+ FD + +R ++ V + F+
Sbjct: 62 PEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMG 121
Query: 146 AFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG- 204
Q Y AG ++AI F + + + + ++N+L++ + + + A FF+ K
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLIN-VLVDNGELEKAKSFFDGAKDM 180
Query: 205 KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMV-IRVGWSKENVMAYDAFLLTLLRASQI 263
++ P+ SF IL++G+ + + A F EM+ + V + +V+ Y++ + L R +
Sbjct: 181 RLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEV---QPSVVTYNSLIGFLCRNDDM 237
Query: 264 EEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAM 323
+ L+ M P F + + + A L M G P L+ Y +
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGIL 297
Query: 324 IGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEW 383
+ G +D A LL EM PD + YN++ L +V E EM
Sbjct: 298 MSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGC 357
Query: 384 PPTSSNCAAAIAMLFD 399
P AA M+ D
Sbjct: 358 KPN----AATYRMMID 369
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 111/268 (41%), Gaps = 7/268 (2%)
Query: 213 FAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKV 272
F L++ + K G+ KA F + I + + + + L+ ++E+ F
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHK--ITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDG 176
Query: 273 MKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGE 332
KD P F + F+ + D A ++D M+ + P+++ YN++IG C N +
Sbjct: 177 AKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDD 236
Query: 333 VDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAA 392
+ A LL++M+ P+++T+ ++ K L + E + +M P N
Sbjct: 237 MGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGI 296
Query: 393 AIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRR 452
++ L + A + M + +KP N L+ +C+ R E R +M +
Sbjct: 297 LMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKG 356
Query: 453 IIIYESTMNKLKDAFYTEGRSRKDRFDS 480
+T + D F R + FDS
Sbjct: 357 CKPNAATYRMMIDGF-----CRIEDFDS 379
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 115/283 (40%), Gaps = 12/283 (4%)
Query: 130 RSMKQEGVLTLRTFVSAFQS-YCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCE 188
R M +EG F + S Y AG F A F+ M N ++ V++ N+LLS+
Sbjct: 104 RDMSKEG------FAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLS 157
Query: 189 ENQTSTAMEFFEEVKGK--IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKEN 246
+ + E F E+ GK I PD S+ L++ ++ + +A E I K +
Sbjct: 158 K-KFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDE--IENKGLKPD 214
Query: 247 VMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWD 306
++ ++ LL+ Q E M + + ++ + L E + + L+
Sbjct: 215 IVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFG 274
Query: 307 AMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNK 366
+ A G+ P++ +NAMI N G++D A E+V HG PD T+ ++ + +
Sbjct: 275 ELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAG 334
Query: 367 KVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEI 409
F E + + + L E A EI
Sbjct: 335 DFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEI 377
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 26/254 (10%)
Query: 209 DGDSFAILLEGWEKEGNAAKAKTTF---GEMVIRVGWSKENVMAY----------DAFLL 255
D + ILL KE N A K TF E +++VG ++ + + D F +
Sbjct: 118 DHTAMQILLSDLRKE-NRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTV 176
Query: 256 TLLRASQIEE--VLRFLKVMKDH-DCFPGLKFFTYALDVF--VKENDAAHAIPLWDAMVA 310
T + ++ V R L VM H D G + Y +F + + A + M +
Sbjct: 177 TAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKS 236
Query: 311 GGIMPNLIMYNAMIGLQCN-------NGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLV 363
GI P+L +N+++ C +G V A ++ EM + P S++YN++ CL
Sbjct: 237 AGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLG 296
Query: 364 RNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHE 423
R ++VRE+ +M ++ P + + + +L+ ++I M+E +P +
Sbjct: 297 RTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERK 356
Query: 424 SANALLIGICSLSR 437
L+ +C + R
Sbjct: 357 FYYDLIGVLCGVER 370
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/330 (19%), Positives = 127/330 (38%), Gaps = 47/330 (14%)
Query: 60 EIETALTSSGIHPSDDCVREVLKLSYN--YPHSAVKFFRWAGRLQKHSPH--AWNLMVDL 115
++E L + PS + V +V++ N P ++FF W+ + S H +N ++ +
Sbjct: 53 DLEENLNQVSVSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRV 112
Query: 116 LGKNELFDPMWDAIRSMKQEG-VLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKD 174
L + + M + +++E + +TF ++ G+ +AI F ++D +D
Sbjct: 113 LAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQD 172
Query: 175 VVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDS-FAILLEGWEKEGNAAKAKTTF 233
V +++S++ C A+ K I+ + S + LL GW + N +A+
Sbjct: 173 GFTVTAIISAL-CSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVI 231
Query: 234 GEM-------------VIRVGWSKENV---------------------------MAYDAF 253
+M + + NV M+Y+
Sbjct: 232 QDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNIL 291
Query: 254 LLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGI 313
L L R ++ E + L+ MK C P + + + V + D M+ G
Sbjct: 292 LSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGF 351
Query: 314 MPNLIMYNAMIGLQCNNGEVDNAFRLLDEM 343
P Y +IG+ C V+ A +L ++M
Sbjct: 352 RPERKFYYDLIGVLCGVERVNFALQLFEKM 381
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 130/313 (41%), Gaps = 14/313 (4%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVM 166
+N ++ KN + + + M G+ + ++ + Y GR EA F ++
Sbjct: 85 TYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEA---FKIL 141
Query: 167 --DNH--GIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEK 222
D H G+ + N LL ++C + T A+E F+ +K ++ P+ ++ IL+ G K
Sbjct: 142 HEDIHLAGLVPGIDTYNILLDALC-KSGHTDNAIELFKHLKSRVKPELMTYNILINGLCK 200
Query: 223 EGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLR-FLKVMKDHDCFPG 281
E+ + G++ N + Y L + +IE+ L+ FLK+ K+ F G
Sbjct: 201 SRRVGSVDWMMRELK-KSGYT-PNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDG 258
Query: 282 LKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMP-NLIMYNAMIGLQCNNGEVDNAFRLL 340
+ +K A A +V G +++ YN ++ L +G +D LL
Sbjct: 259 FANCA-VVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLL 317
Query: 341 DEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDC 400
+E+ + G PD T+ +I L+ E A + + P+ C I L
Sbjct: 318 EEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKA 377
Query: 401 DDPEAAHEIWSYM 413
+ A +++ M
Sbjct: 378 GHVDRAMRLFASM 390
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 115/304 (37%), Gaps = 58/304 (19%)
Query: 125 MWDAIRSMKQEGVLTLRTFVSAF-------QSYCVAGRFNEAIMSFDVMDNHGIEKDVVA 177
+ D IR V+T T + + ++Y V R EA GIE DV
Sbjct: 36 LIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREA----------GIEPDVTT 85
Query: 178 VNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEM 236
NSL+S + + ++ F+E + ++PD S+ L+ + K G +A E
Sbjct: 86 YNSLISG-AAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHED 144
Query: 237 VIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKEN 296
+ G PG+ + LD K
Sbjct: 145 IHLAGL------------------------------------VPGIDTYNILLDALCKSG 168
Query: 297 DAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYN 356
+AI L+ + + + P L+ YN +I C + V + ++ E+ G P+++TY
Sbjct: 169 HTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYT 227
Query: 357 MIFKCLVRNKKVRETESFFAEMVKNEWPPTS-SNCAAAIAMLFDCDDPEAAHEIWSYMVE 415
+ K + K++ + F +M K + +NC A ++ L E A+E +V
Sbjct: 228 TMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANC-AVVSALIKTGRAEEAYECMHELVR 286
Query: 416 NHVK 419
+ +
Sbjct: 287 SGTR 290
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 121/310 (39%), Gaps = 43/310 (13%)
Query: 89 HSAVKFFRWAGRLQKHSPHAWNL-----MVDLLGKNELFDPMWDAIRSMKQ----EGVLT 139
A++FF W ++ H N M LL K F +WD +R + + + V+T
Sbjct: 108 QKALEFFFW---IETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVT 164
Query: 140 LRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEEN--QTSTAME 197
+ + G EA+ +F M + + DV A N++++++C N + ++
Sbjct: 165 TASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLD 224
Query: 198 FFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTL 257
+ + PD ++ IL+ + + G +T + + R W
Sbjct: 225 QMQLPGFRYPPDTYTYTILISSYCRYG----MQTGCRKAIRRRMW--------------- 265
Query: 258 LRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNL 317
E R + M P + + +D K N A+ L++ M G +PN
Sbjct: 266 -------EANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQ 318
Query: 318 IMYNAMIGLQCNNGEVDNAFRLLDEM--VLHGAFPDSLTYNMIFKCLVRNKKVRETESFF 375
+ YN+ I E++ A ++ M + HG P S TY + LV ++ E
Sbjct: 319 VTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGV-PGSSTYTPLIHALVETRRAAEARDLV 377
Query: 376 AEMVKNEWPP 385
EMV+ P
Sbjct: 378 VEMVEAGLVP 387
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 92/235 (39%), Gaps = 24/235 (10%)
Query: 204 GKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQI 263
GK S L++ +EG +A TF M + K +V AY+ + L R
Sbjct: 159 GKNVVTTASITCLMKCLGEEGFVKEALATFYRM--KEYHCKPDVYAYNTIINALCRVGNF 216
Query: 264 EEVLRFLKVMKDHDCFPGLKF----FTYALDV-----FVKENDAAHAIP--LWDA----- 307
++ RFL D PG ++ +TY + + + + AI +W+A
Sbjct: 217 KKA-RFLL---DQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFR 272
Query: 308 -MVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNK 366
M+ G +P+++ YN +I C + A L ++M G P+ +TYN +
Sbjct: 273 EMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTN 332
Query: 367 KVRETESFFAEMVK-NEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKP 420
++ M K P SS I L + A ++ MVE + P
Sbjct: 333 EIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVP 387
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 101/238 (42%), Gaps = 5/238 (2%)
Query: 197 EFFEEVKGKIA--PDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFL 254
+FF +K +++ P + I+L + + G A+ TF EM + VG + V A L
Sbjct: 173 DFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEM-LEVGCEPDAV-ACGTML 230
Query: 255 LTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIM 314
T R + +L F K +++ + + L K++ I LW MV G+
Sbjct: 231 CTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVP 290
Query: 315 PNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESF 374
PN Y ++ G + A + EM G P+ +TY+ + V+ +
Sbjct: 291 PNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGL 350
Query: 375 FAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGI 432
+ +M P++ CA +++ + ++ A +++ M N + P E L+I I
Sbjct: 351 YEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKI-PADEVIRGLIIRI 407
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 122/277 (44%), Gaps = 12/277 (4%)
Query: 105 SPHAWNLMVDLLGKNELFDPMWDAIRSMKQEG----VLTLRTFVSAFQSYCVAGRFNEAI 160
SP ++ +V +N ++ I + EG V L F+ + RF +
Sbjct: 147 SPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKV- 205
Query: 161 MSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGW 220
+ MD+ G ++V N ++ S C E F+ +K + P+ SF ++++G
Sbjct: 206 --YKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGA 263
Query: 221 EKEGNAAKAKTTFGEMVIRVG-WSKENVMAYDAFLLTLLRASQIE--EVLRFLKVMKDHD 277
K G+ A G+M + G + N + Y++ + +A +++ E +R V D
Sbjct: 264 CKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVD 323
Query: 278 CFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAF 337
C + + +D + + + A+ L D M + G++ N ++YN+++ G+++ A
Sbjct: 324 CNE--RTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAM 381
Query: 338 RLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESF 374
+L +M D T ++ + L RN V+E F
Sbjct: 382 SVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEF 418
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 211 DSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFL 270
D F L+ + G+A A + R +V A + F+ LL ++I+ RF
Sbjct: 149 DVFDSLVRACTQNGDAQGAYEVIEQ--TRAEGFCVSVHALNNFMGCLLNVNEID---RFW 203
Query: 271 KVMKDHDCF---PGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQ 327
KV K+ D + F + F KE+ A+ ++ M+ G+ PN++ +N MI
Sbjct: 204 KVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGA 263
Query: 328 CNNGEVDNAFRLLDEM-VLHGAF--PDSLTYNMIFKCLVRNKKVRETESFFAEMVKN 381
C G++ A +LL +M ++ G F P+++TYN + + ++ E +MVK+
Sbjct: 264 CKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKS 320
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 120/285 (42%), Gaps = 14/285 (4%)
Query: 141 RTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFE 200
RT+ + +Y AG +EA+ D M + G+ + V NS++ + E AM
Sbjct: 327 RTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFME-GDIEGAMSVLR 385
Query: 201 EVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSK--ENVMAYDAFLLTL 257
++ K + D + AI++ G + G +A E ++ K E+++ ++ +
Sbjct: 386 DMNSKNMQIDRFTQAIVVRGLCRNGYVKEAV----EFQRQISEKKLVEDIVCHNTLMHHF 441
Query: 258 LRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNL 317
+R ++ + L M F +D ++KE A+ ++D M+ NL
Sbjct: 442 VRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNL 501
Query: 318 IMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAE 377
++YN+++ G A +++ M D +TYN + ++ V E + ++
Sbjct: 502 VIYNSIVNGLSKRGMAGAAEAVVNAM----EIKDIVTYNTLLNESLKTGNVEEADDILSK 557
Query: 378 MVKNEWPPTSSNCAAAIAMLFDC--DDPEAAHEIWSYMVENHVKP 420
M K + + S I + C E A E+ +MVE V P
Sbjct: 558 MQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVP 602
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%)
Query: 249 AYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAM 308
+Y++ + L + + IE++ + ++++ D P + + ++ K+ND A + DAM
Sbjct: 514 SYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAM 573
Query: 309 VAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKV 368
G+ P + +Y+++IG G V A +M+ G PD + Y ++ RN ++
Sbjct: 574 EELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRI 633
Query: 369 RETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKP 420
E E+VK+ P+S I+ E + M+E+ + P
Sbjct: 634 DEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSP 685
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 113/288 (39%), Gaps = 12/288 (4%)
Query: 171 IEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAILLEGWEKEGNAAKA 229
++ ++ VN L C++N A + ++ + P ++ ++ K+G +A
Sbjct: 547 VDTYLIVVNEL-----CKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEA 601
Query: 230 KTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYAL 289
+ TF +M + G + + AY + T R +I+E ++ + H P +T +
Sbjct: 602 EETFAKM-LESGIQPDEI-AYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLI 659
Query: 290 DVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAF 349
FVK D M+ G+ PN+++Y A+IG G+ +F L M +
Sbjct: 660 SGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIK 719
Query: 350 PDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAM---LFDCDDPEAA 406
D + Y + L R ++ E K + +++ L + A
Sbjct: 720 HDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFA 779
Query: 407 HEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRII 454
E+ V+ + P N ++ G C+ R E H E M I+
Sbjct: 780 MEVIG-KVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIV 826
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 111/277 (40%), Gaps = 13/277 (4%)
Query: 146 AFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSIC-CEENQTSTAMEFFEEVKG 204
A +S C GR +EA + D N LL +C C++ EF +E++
Sbjct: 165 AVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD--LHVVYEFVDEMRD 222
Query: 205 K--IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWS--KENVMAYDAFLLTLLRA 260
+ PD SF IL++ N +A +V ++G + K + Y+ +
Sbjct: 223 DFDVKPDLVSFTILIDNVCNSKNLREAMY----LVSKLGNAGFKPDCFLYNTIMKGFCTL 278
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
S+ E + K MK+ P + + K A MV G P+ Y
Sbjct: 279 SKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATY 338
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
+++ C GE A LL+EM G P+ TYN + L + + + + + EM+K
Sbjct: 339 TSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELY-EMMK 397
Query: 381 NEWPPTSSNC-AAAIAMLFDCDDPEAAHEIWSYMVEN 416
+ SN A + L A+E++ Y V++
Sbjct: 398 SSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDS 434
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 8/206 (3%)
Query: 271 KVMKDHDCFPGLKFFTYALDVFVKENDAA-------HAI-PLWDAMVAGGIMPNLIMYNA 322
K+++ D P L+ +T L +K + HA+ L M + G++P+ + N
Sbjct: 169 KMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNM 228
Query: 323 MIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE 382
+I EVD A R+ EM L+G+ P++ TY+ + K + +V + F+ EM
Sbjct: 229 IIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKG 288
Query: 383 WPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVR 442
P S I L + A E+ M+ N + P + N +L +C R SE
Sbjct: 289 MVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEAL 348
Query: 443 RHAEDMLDRRIIIYESTMNKLKDAFY 468
E+ R ++ E L D Y
Sbjct: 349 EMVEEWKKRDPVMGERNYRTLMDEVY 374
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 106/246 (43%), Gaps = 3/246 (1%)
Query: 144 VSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK 203
V A Y A + +I +F ++ + I + V ++N+LL + ++ + E K
Sbjct: 115 VRAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPK 174
Query: 204 G-KIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQ 262
I PD +++ ++ + G+ + + + EM W K ++ + + +
Sbjct: 175 MYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEM--ERKWIKPTAASFGLMIDGFYKEEK 232
Query: 263 IEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNA 322
+EV + +++M + G+ + + K +A A L D +++ + PN + Y+
Sbjct: 233 FDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSL 292
Query: 323 MIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE 382
+I C+ +D A L + MV +G PDS Y + CL + E ++
Sbjct: 293 LIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKN 352
Query: 383 WPPTSS 388
W P+ S
Sbjct: 353 WVPSFS 358
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 5/190 (2%)
Query: 213 FAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKV 272
+ ++++ + K KA + F M + W E Y++ L ++E R L
Sbjct: 518 YNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDE--CTYNSLFQMLAGVDLVDEAQRILAE 575
Query: 273 MKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGE 332
M D C PG K + + +V+ + A+ L++AM G+ PN ++Y ++I +G
Sbjct: 576 MLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGM 635
Query: 333 VDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAA 392
V+ A + M HG + + + K + + E + +M +E P + AA
Sbjct: 636 VEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGP---DVAA 692
Query: 393 AIAMLFDCDD 402
+ +ML C D
Sbjct: 693 SNSMLSLCAD 702
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 120/315 (38%), Gaps = 39/315 (12%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
TF + Y AGR N+A F M G+ D V N+++ + C S A ++
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHT-CGTHGHLSEAESLLKK 365
Query: 202 VKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
++ K I+PD ++ ILL G+ +A + + +VG + V + A L L +
Sbjct: 366 MEEKGISPDTKTYNILLSLHADAGD-IEAALEYYRKIRKVGLFPDTV-THRAVLHILCQR 423
Query: 261 SQIEEVLRFLKVMK------DHDCFP---------GLK------FFTYALDVFVKENDAA 299
+ EV + M D P GL F + LD + A
Sbjct: 424 KMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLA 483
Query: 300 HAI------PLW---DAMVAG-----GIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVL 345
I LW + + G G +++ YN MI + A L M
Sbjct: 484 AVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKN 543
Query: 346 HGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEA 405
G +PD TYN +F+ L V E + AEM+ + P AA IA
Sbjct: 544 QGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSD 603
Query: 406 AHEIWSYMVENHVKP 420
A +++ M + VKP
Sbjct: 604 AVDLYEAMEKTGVKP 618
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 116/284 (40%), Gaps = 14/284 (4%)
Query: 102 QKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLR-TFVSAFQSYCVAGRFNEAI 160
Q++ +N+M+ GK +L + + MK +G T+ S FQ +EA
Sbjct: 511 QRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQ 570
Query: 161 MSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-KGKIAPDGDSFAILLEG 219
M + G + ++++S S A++ +E + K + P+ + L+ G
Sbjct: 571 RILAEMLDSGCKPGCKTYAAMIASYV-RLGLLSDAVDLYEAMEKTGVKPNEVVYGSLING 629
Query: 220 WEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQ----IEEVLRFLKVMKD 275
+ + G +A F M + V + L +L++A +EE R MKD
Sbjct: 630 FAESGMVEEAIQYFRMM------EEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKD 683
Query: 276 HDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDN 335
+ P + L + + A +++A+ G ++I + M+ L G +D
Sbjct: 684 SEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTC-DVISFATMMYLYKGMGMLDE 742
Query: 336 AFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMV 379
A + +EM G D ++N + C + ++ E F EM+
Sbjct: 743 AIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEML 786
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 11/193 (5%)
Query: 200 EEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLR 259
E ++ I P ++ L++ + K G A G+M ++G + V L +
Sbjct: 212 EMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMS-KIGMQPDEVTT-GIVLQMYKK 269
Query: 260 ASQIEEVLRFLKV-------MKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGG 312
A + ++ F K H C + T +D + K A + M+ G
Sbjct: 270 AREFQKAEEFFKKWSCDENKADSHVCLSSYTYNT-MIDTYGKSGQIKEASETFKRMLEEG 328
Query: 313 IMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETE 372
I+P + +N MI + NNG++ L+ M LH A PD+ TYN++ +N +
Sbjct: 329 IVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCA-PDTRTYNILISLHTKNNDIERAG 387
Query: 373 SFFAEMVKNEWPP 385
++F EM + P
Sbjct: 388 AYFKEMKDDGLKP 400
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 84/414 (20%), Positives = 171/414 (41%), Gaps = 62/414 (14%)
Query: 107 HAWNLMVDLLGKNELFDPMWDAIRSMKQEGV----LTLRTFVSAFQSYCVAGRFNEAIMS 162
+N+++ L KN + + MK +G+ ++ RT + AF + EA
Sbjct: 368 RTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFS---IRHMVEEAEGL 424
Query: 163 FDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE--VKGKIAPDGDSFAILLEGW 220
MD+ +E D S L+ + E + +F+ V G ++ +G ++ ++ +
Sbjct: 425 IAEMDDDNVEIDEYT-QSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEG--YSANIDAY 481
Query: 221 EKEGNAAKAKTTF--------------GEMVIRVGWSK---------ENVMAYDAF---- 253
+ G ++A+ F M+ G SK E++M+Y
Sbjct: 482 GERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKC 541
Query: 254 ----LLTLLRASQIEEVLR-FLKVMKD----HDCFPGLKFFTYALDVFVKENDAAHAIPL 304
L+ +L ++ + R +L+ M++ DC P + + FVK A +
Sbjct: 542 TYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIP----YCAVISSFVKLGQLNMAEEV 597
Query: 305 WDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVR 364
+ MV I P++++Y +I + G V A ++ M G +S+ YN + K +
Sbjct: 598 YKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTK 657
Query: 365 NKKVRETESFFAEMV----KNEWPPT-SSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVK 419
+ E E+ + +++ K ++P +SNC I + + A I+ M +
Sbjct: 658 VGYLDEAEAIYRKLLQSCNKTQYPDVYTSNC--MINLYSERSMVRKAEAIFDSMKQRG-- 713
Query: 420 PLHESANALLIGICSLS-RFSEVRRHAEDMLDRRIIIYESTMNKLKDAFYTEGR 472
+E A+++ + + RF E + A+ M + +I+ + N + F +GR
Sbjct: 714 EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGR 767
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/361 (19%), Positives = 133/361 (36%), Gaps = 48/361 (13%)
Query: 65 LTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRW--AGRLQKHSPHAWNLMVDLLGKNELF 122
L+ S I P+ D + + L LS +A+ F W + H+ + VD G+ + F
Sbjct: 100 LSFSHITPNPDLILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDF 159
Query: 123 DPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDN-HGIEKDVVAVNSL 181
M + I K +G+ +T SA AGR + F+ M+N +G+++D ++ +L
Sbjct: 160 KGMLEIIS--KYKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESL-TL 216
Query: 182 LSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGW---EKEGNAAKAKTTFGEMVI 238
+ CE+ S A + + +I PD + +L+ GW EK A +
Sbjct: 217 VVKKLCEKGHASIAEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGF 276
Query: 239 RVGWSKENVM-------------------------------------AYDAFLLTLLRAS 261
+G N+M ++ + L +
Sbjct: 277 EIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIR 336
Query: 262 QIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGI--MPNLIM 319
+ EE + M + C P + + + + + D M + G + N
Sbjct: 337 RTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKE 396
Query: 320 YNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMV 379
Y + + C +++A + M +G P TY+++ + N ++ + E
Sbjct: 397 YYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAA 456
Query: 380 K 380
K
Sbjct: 457 K 457
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 84/198 (42%), Gaps = 1/198 (0%)
Query: 212 SFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLK 271
SF LL + +A TF E+ ++G + +++ Y+ + L R ++++L +
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGIT-PDLVTYNTMIKALCRKGSMDDILSIFE 217
Query: 272 VMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNG 331
++ + P L F L+ F + +WD M + + PN+ YN+ + N
Sbjct: 218 ELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNK 277
Query: 332 EVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCA 391
+ +A L+D M G PD TYN + + + E + EM + P +
Sbjct: 278 KFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYC 337
Query: 392 AAIAMLFDCDDPEAAHEI 409
I +L D + A E+
Sbjct: 338 MLIPLLCKKGDLDRAVEV 355
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 5/217 (2%)
Query: 150 YCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK--IA 207
Y +G A FD M E+ V + N+LLS+ + AM+ F+E+ K I
Sbjct: 132 YGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYV-NSKKLDEAMKTFKELPEKLGIT 190
Query: 208 PDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVL 267
PD ++ +++ ++G+ + F E+ + G+ + ++++++ L R E
Sbjct: 191 PDLVTYNTMIKALCRKGSMDDILSIFEELE-KNGF-EPDLISFNTLLEEFYRRELFVEGD 248
Query: 268 RFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQ 327
R +MK + P ++ + + + A+ L D M GI P++ YNA+I
Sbjct: 249 RIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAY 308
Query: 328 CNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVR 364
+ ++ + +EM G PD++TY M+ L +
Sbjct: 309 RVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCK 345
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 79/193 (40%), Gaps = 1/193 (0%)
Query: 250 YDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMV 309
Y AF+ L A + + L+ K D F + ++ A HA L+D M
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMP 149
Query: 310 AGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLH-GAFPDSLTYNMIFKCLVRNKKV 368
+ +NA++ N+ ++D A + E+ G PD +TYN + K L R +
Sbjct: 150 ELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSM 209
Query: 369 RETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANAL 428
+ S F E+ KN + P + + + + IW M ++ P S N+
Sbjct: 210 DDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSR 269
Query: 429 LIGICSLSRFSEV 441
+ G+ +F++
Sbjct: 270 VRGLTRNKKFTDA 282
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 9/176 (5%)
Query: 108 AWNLMVDLLGKNELF---DPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFD 164
++N +++ + ELF D +WD ++S +R++ S + +F +A+ D
Sbjct: 230 SFNTLLEEFYRRELFVEGDRIWDLMKSKNLSP--NIRSYNSRVRGLTRNKKFTDALNLID 287
Query: 165 VMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IAPDGDSFAILLEGWEKE 223
VM GI DV N+L+++ +N M+ + E+K K + PD ++ +L+ K+
Sbjct: 288 VMKTEGISPDVHTYNALITAYRV-DNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKK 346
Query: 224 GNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCF 279
G+ +A E + S+ N+ Y + L+ A +I+E + +K K F
Sbjct: 347 GDLDRAVEVSEEAIKHKLLSRPNM--YKPVVERLMGAGKIDEATQLVKNGKLQSYF 400
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Query: 213 FAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKV 272
+ I++ G KEG KA R N + Y++ + L + + E LR
Sbjct: 658 YTIIINGLCKEGFLVKALNLCSFAKSR--GVTLNTITYNSLINGLCQQGCLVEALRLFDS 715
Query: 273 MKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGE 332
+++ P + +D KE A L D+MV+ G++PN+I+YN+++ C G+
Sbjct: 716 LENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQ 775
Query: 333 VDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAE 377
++A R++ ++ PD+ T + + K + + E S F E
Sbjct: 776 TEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTE 820
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 107/259 (41%), Gaps = 42/259 (16%)
Query: 116 LGKNELFDPMWDAIRSMKQEGVLT--LRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEK 173
+GK EL ++ S GVL L T+ + + C G+ +E +++ G E
Sbjct: 184 IGKPELALGFFE---SAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEF 240
Query: 174 DVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTF 233
D V ++ + M+ E V+ + D S++IL++G KEGN +A
Sbjct: 241 DCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLL 300
Query: 234 GEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFV 293
G+M I+ G + N++ Y A + L + ++EE
Sbjct: 301 GKM-IKEGV-EPNLITYTAIIRGLCKMGKLEE---------------------------- 330
Query: 294 KENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSL 353
A L++ +++ GI + +Y +I C G ++ AF +L +M G P L
Sbjct: 331 -------AFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSIL 383
Query: 354 TYNMIFKCLVRNKKVRETE 372
TYN + L +V E +
Sbjct: 384 TYNTVINGLCMAGRVSEAD 402
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 107/262 (40%), Gaps = 17/262 (6%)
Query: 108 AWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVM 166
++++++D L K + + M +EGV L T+ + + C G+ EA + F+ +
Sbjct: 279 SYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRI 338
Query: 167 DNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNA 226
+ GIE D +L+ IC + N + + I P ++ ++ G G
Sbjct: 339 LSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRV 398
Query: 227 AKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVL----RFLKVMKDHDCFPGL 282
++A +V +V+ Y L + ++ I+ VL RFL+ D L
Sbjct: 399 SEADEVSKGVV-------GDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMD----L 447
Query: 283 KFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDE 342
L F+ A L+ AM + P+ Y MI C G+++ A + +E
Sbjct: 448 VMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNE 507
Query: 343 MVLHGAFPDSLTYNMIFKCLVR 364
+ + ++ YN I L +
Sbjct: 508 L-RKSSVSAAVCYNRIIDALCK 528
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 105/252 (41%), Gaps = 13/252 (5%)
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEK--DVVAVNSLLSSICCEENQTSTAMEFF 199
TF S + G + AI ++M N + D ++++S C + + A+ FF
Sbjct: 136 TFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFC-KIGKPELALGFF 194
Query: 200 EEV--KGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRV---GWSKENVMAYDAFL 254
E G + P+ ++ L+ + G + + ++V R+ G+ + V Y ++
Sbjct: 195 ESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVR----DLVRRLEDEGFEFDCVF-YSNWI 249
Query: 255 LTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIM 314
+ + + L + M + + ++ +D KE + A+ L M+ G+
Sbjct: 250 HGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVE 309
Query: 315 PNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESF 374
PNLI Y A+I C G+++ AF L + ++ G D Y + + R + S
Sbjct: 310 PNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSM 369
Query: 375 FAEMVKNEWPPT 386
+M + P+
Sbjct: 370 LGDMEQRGIQPS 381
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 115/271 (42%), Gaps = 3/271 (1%)
Query: 150 YCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAP 208
Y A + ++ F ++ I + V ++N+LL + ++ + E K I P
Sbjct: 126 YAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEP 185
Query: 209 DGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLR 268
D +++ +++ + + G+A+ + + EM R G K N ++ + + +EV +
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEME-RKGI-KPNSSSFGLMISGFYAEDKSDEVGK 243
Query: 269 FLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQC 328
L +MKD G+ + + K + A L D M++ G+ PN + Y+ +I C
Sbjct: 244 VLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFC 303
Query: 329 NNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSS 388
N + + A +L MV G PDS Y + L + S E ++ W P+ S
Sbjct: 304 NEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFS 363
Query: 389 NCAAAIAMLFDCDDPEAAHEIWSYMVENHVK 419
+ + L E A E+ + E +
Sbjct: 364 IMKSLVNGLAKDSKVEEAKELIGQVKEKFTR 394
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 80/194 (41%), Gaps = 1/194 (0%)
Query: 246 NVMAYDAFLLTLLRASQIEEVLR-FLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPL 304
V + +A L L A +E R ++++ K + P L+ + + VF + A+ + +
Sbjct: 150 TVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSI 209
Query: 305 WDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVR 364
M GI PN + MI + D ++L M G TYN+ + L +
Sbjct: 210 VAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCK 269
Query: 365 NKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHES 424
KK +E ++ M+ P + + I + DD E A +++ MV KP E
Sbjct: 270 RKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSEC 329
Query: 425 ANALLIGICSLSRF 438
L+ +C F
Sbjct: 330 YFTLIYYLCKGGDF 343
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 130/318 (40%), Gaps = 11/318 (3%)
Query: 109 WNLMVDLLGKNELFDPMWDAIRSMKQEGV-LTLRTFVSAFQSYCVAGRFNEAIMSFDVMD 167
+ ++ K+ D M++ M GV L TF + AG+ +A ++ ++
Sbjct: 505 YTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILR 564
Query: 168 NHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK---IAPDGDSFAILLEGWEKEG 224
+ ++ D V N+L+S+ C + A + E+K + I PD S L++ G
Sbjct: 565 SKNVKPDRVVFNALISA-CGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAG 623
Query: 225 NAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKF 284
+AK + +M+ + G + Y + + ++ + K MK+ D P F
Sbjct: 624 QVERAKEVY-QMIHKYGI-RGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVF 681
Query: 285 FTYALDV--FVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDE 342
F+ +DV K D A I L DA + GI I Y++++G CN + A L ++
Sbjct: 682 FSALIDVAGHAKMLDEAFGI-LQDAK-SQGIRLGTISYSSLMGACCNAKDWKKALELYEK 739
Query: 343 MVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDD 402
+ P T N + L ++ + + E+ P + + + DD
Sbjct: 740 IKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDD 799
Query: 403 PEAAHEIWSYMVENHVKP 420
E + ++ S + V P
Sbjct: 800 FEVSFKLLSQAKGDGVSP 817
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%)
Query: 308 MVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKK 367
M+ I P I YN+MI C VD+A R+LD M G PD +T++ + + K+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 368 VRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANA 427
V F EM + + I D +AA ++ + M+ V P + + +
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 428 LLIGICSLSRFSEVRRHAEDM 448
+L G+CS + ED+
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 67/137 (48%)
Query: 246 NVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLW 305
+ Y++ + + ++++ R L M C P + F+ ++ + K + + ++
Sbjct: 9 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 68
Query: 306 DAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRN 365
M GI+ N + Y +I C G++D A LL+EM+ G PD +T++ + L
Sbjct: 69 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 128
Query: 366 KKVRETESFFAEMVKNE 382
K++R+ + ++ K+E
Sbjct: 129 KELRKAFAILEDLQKSE 145
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 136/332 (40%), Gaps = 54/332 (16%)
Query: 79 EVLKLSYNY--PHSAVKFFRWAGRLQKHSP--HAWNLMVDLLGKNELFDPMWDAIRSMKQ 134
EVLK+ N P + ++ + + + P + LM++ G+ +++D + + +R++K
Sbjct: 64 EVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKL 123
Query: 135 EGVLTLRT--FVSAFQSYC-VAGRFNEAI---------------MSFDVMDNH------- 169
E F + + Y +AGR N AI SF+ + N
Sbjct: 124 EKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLF 183
Query: 170 -------------GIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-KGKIAPDGDSFAI 215
G+E D +N L+ +C E A++ +E + K P+ +F+
Sbjct: 184 DEIHKIFVSAPKLGVEIDACCLNILIKGLC-ESGNLEAALQLLDEFPQQKSRPNVMTFSP 242
Query: 216 LLEGWEKEGNAAKAKTTFGEMVIRVGWSKENV----MAYDAFLLTLLRASQIEEVLRFLK 271
L+ G+ +G +A M KE + + ++ + L + ++EE + L+
Sbjct: 243 LIRGFCNKGKFEEAFKLLERM------EKERIEPDTITFNILISGLRKKGRVEEGIDLLE 296
Query: 272 VMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNG 331
MK C P + L + + A + M++ G+ P+ + Y M+ C
Sbjct: 297 RMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETK 356
Query: 332 EVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLV 363
V +L +MV HG P +L + + +C+V
Sbjct: 357 SVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVV 388
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 84/223 (37%), Gaps = 40/223 (17%)
Query: 251 DAFLLTLLR-----ASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFV--KENDAAH--- 300
+ F L+R A +I + L M D C+P K F + L++ V K D H
Sbjct: 131 EEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIF 190
Query: 301 ------------------------------AIPLWDAMVAGGIMPNLIMYNAMIGLQCNN 330
A+ L D PN++ ++ +I CN
Sbjct: 191 VSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNK 250
Query: 331 GEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNC 390
G+ + AF+LL+ M PD++T+N++ L + +V E M P
Sbjct: 251 GKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTY 310
Query: 391 AAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGIC 433
+ L D A E+ S M+ ++P S +++G+C
Sbjct: 311 QEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLC 353
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 140/363 (38%), Gaps = 15/363 (4%)
Query: 60 EIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGRLQ-----KHSPHAWNLMVD 114
E+E L + SD+ V VLK +P A+ FF W G +HS +N +
Sbjct: 212 EVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALR 271
Query: 115 LLGKNELFDPMWDAIRSMKQEGV-LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEK 173
+L + W + MK G + L T++ + + + E + ++ M + +
Sbjct: 272 VLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKP 331
Query: 174 DVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTF 233
+ + LL + N ++ V K G S + + + +
Sbjct: 332 SIQDCSLLLRYLSGSPNPD---LDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDE 388
Query: 234 GEMVIRV----GWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYAL 289
E + + G+ +N+ Y + L +A ++EE L M+ CFP +K +T +
Sbjct: 389 AEEITKAMRNAGYEPDNI-TYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILI 447
Query: 290 DVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAF 349
K N+ A+ + M+ G + + + +I + + + A L EMV +
Sbjct: 448 QGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANV 507
Query: 350 -PDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHE 408
P TY ++ L++ KK E M K +P + +A +D + +
Sbjct: 508 KPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLD 567
Query: 409 IWS 411
+ S
Sbjct: 568 VLS 570
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/281 (19%), Positives = 127/281 (45%), Gaps = 6/281 (2%)
Query: 109 WNLMVDLLGKNELFDPMWDAIRSMKQEGV-LTLRTFVSAFQSYCVAGRFNEAIMSFDVMD 167
+N +++ ++ + A+ MK+ G+ T T+ + + Y +AG+ + D+M
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 168 NHG---IEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAILLEGWEKE 223
G + ++ N L+ + C ++ + A E ++++ + PD ++ + + ++
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWC-KKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQK 236
Query: 224 GNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLK 283
G +A++ E ++ +K N + R ++ + LRF++ MK+ L
Sbjct: 237 GETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLV 296
Query: 284 FFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEM 343
F ++ FV+ D + M + ++I Y+ ++ + G ++ A ++ EM
Sbjct: 297 VFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEM 356
Query: 344 VLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWP 384
V G PD+ Y+++ K VR K+ ++ E ++ P
Sbjct: 357 VKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRP 397
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 119/281 (42%), Gaps = 19/281 (6%)
Query: 107 HAWNLMVDLLGKNELFDPMWDAIRSMKQE---GVLTLRT-FVSAFQSYCVAGRFNEAIMS 162
+ ++ ++ GK +FD ++ M+Q+ G L L + + + C +++AI
Sbjct: 191 YTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLC---DYSKAISI 247
Query: 163 FDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEK 222
F + GI D+VA NS+++ + + E + + P+ S++ LL + +
Sbjct: 248 FSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVE 307
Query: 223 EGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLL-----RASQIEEVLRFLKVMKDHD 277
+A + F EM KE A D ++ + ++E R ++ D
Sbjct: 308 NHKFLEALSVFAEM-------KEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMD 360
Query: 278 CFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAF 337
P + + L V+ + AI L+ M I N++ YN MI + E + A
Sbjct: 361 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKAT 420
Query: 338 RLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEM 378
L+ EM G P+++TY+ I + K+ + F ++
Sbjct: 421 NLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKL 461
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 104/251 (41%), Gaps = 4/251 (1%)
Query: 181 LLSSICCEEN--QTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVI 238
+ S+ EN Q S A+ + + K P ++ ++L + A F EM
Sbjct: 124 FMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQ 183
Query: 239 RVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDA 298
R + Y + + + + L +L+ M+ L ++ +++ + D
Sbjct: 184 RA--LAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDY 241
Query: 299 AHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMI 358
+ AI ++ + GI P+L+ YN+MI + A L+ EM G P++++Y+ +
Sbjct: 242 SKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTL 301
Query: 359 FKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHV 418
V N K E S FAEM + + C I + D + A ++ + + +
Sbjct: 302 LSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDI 361
Query: 419 KPLHESANALL 429
+P S N +L
Sbjct: 362 EPNVVSYNTIL 372
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%)
Query: 250 YDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMV 309
Y + L+ + +EV+ L MK P L +T L + + D A L+D ++
Sbjct: 254 YTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELL 313
Query: 310 AGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVR 369
G+ P++ YN I C +++ A +++ M G+ P+ +TYN++ K LV+ +
Sbjct: 314 LLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLS 373
Query: 370 ETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAH 407
++ + EM N S I+ + D+ AH
Sbjct: 374 RAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAH 411
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 127/327 (38%), Gaps = 23/327 (7%)
Query: 105 SPHAWNLMVDLLGKNELFDPMWDAIRSMK-QEGVLTLRT-FVSAFQSYCVAGRFNEAIMS 162
+P A+ ++ L K+ + + + ++ E T + F +Y +GR EAI
Sbjct: 71 TPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEV 130
Query: 163 FDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDG-----DSFAILL 217
F + N +N+LL + + ++E E+ K G +F IL+
Sbjct: 131 FFKIPNFRCVPSAYTLNALLLVLV----RKRQSLELVPEILVKACRMGVRLEESTFGILI 186
Query: 218 EGWEKEGNAAKAKTTFGEMVIRVGWSKENVMA----YDAFLLTLLRA--SQIEEVLRFLK 271
+ + G A M S+++V+ Y L ++ + S +V+ +L+
Sbjct: 187 DALCRIGEVDCATELVRYM------SQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLE 240
Query: 272 VMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNG 331
++ PGL+ +T + V+ + + + M + P+L+ Y ++ +
Sbjct: 241 DLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADE 300
Query: 332 EVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCA 391
+ A +L DE++L G PD TYN+ L + + + M K P
Sbjct: 301 DYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYN 360
Query: 392 AAIAMLFDCDDPEAAHEIWSYMVENHV 418
I L D A +W M N V
Sbjct: 361 ILIKALVKAGDLSRAKTLWKEMETNGV 387
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 111/277 (40%), Gaps = 46/277 (16%)
Query: 88 PHSAVKFFRWAGRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLT-LRTFVSA 146
P VK R RL++ + + +++D L + D + +R M Q+ V+ R +
Sbjct: 164 PEILVKACRMGVRLEEST---FGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRL 220
Query: 147 FQSYC---------VAG--------RFNEAIMSFDVMDNHGIE----KDVVAVNSLLSSI 185
S C V G RF+ + + V+ +E K+VV+V L+ +
Sbjct: 221 LSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSV---LNQM 277
Query: 186 CCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKE 245
C+ ++ PD + I+L+G + + KA F E+++
Sbjct: 278 KCD----------------RVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLG--LAP 319
Query: 246 NVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLW 305
+V Y+ ++ L + + IE L+ + M P + + + VK D + A LW
Sbjct: 320 DVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLW 379
Query: 306 DAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDE 342
M G+ N ++ MI EV A LL+E
Sbjct: 380 KEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEE 416
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 5/146 (3%)
Query: 241 GWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAH 300
G++ E V +DA L + + E L +KD + P + T ++ + A
Sbjct: 195 GFTNEAVKMFDA----LSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKE 250
Query: 301 AIPLWDAMVAGGIMPNLIMYNAMI-GLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIF 359
+ ++ M+A G+ PN Y+ +I GL + +A + L EM+ +G P++ TY +F
Sbjct: 251 TLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVF 310
Query: 360 KCLVRNKKVRETESFFAEMVKNEWPP 385
+ VR K EM + P
Sbjct: 311 EAFVREGKEESARELLQEMKGKGFVP 336
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 123/305 (40%), Gaps = 7/305 (2%)
Query: 156 FNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE-VKGKIAPDGDSFA 214
+N+AI F+ M G+ D V +++L + + + + +E V PD +F+
Sbjct: 237 YNKAIEWFERMYKTGLMPDEVTYSAILD-VYSKSGKVEEVLSLYERAVATGWKPDAIAFS 295
Query: 215 ILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMK 274
+L + + + G+ + EM + K NV+ Y+ L + RA + M
Sbjct: 296 VLGKMFGEAGDYDGIRYVLQEM--KSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEML 353
Query: 275 DHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVD 334
+ P K T + ++ K A A+ LW+ M A + I+YN ++ + + G +
Sbjct: 354 EAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEE 413
Query: 335 NAFRLLDEMVLH-GAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAA 393
A RL ++M PD+ +Y + K + F EM+K C
Sbjct: 414 EAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCL 473
Query: 394 IAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALL--IGICSLSRFSEVRRHAEDMLDR 451
+ L + ++ ++ VKP LL + +C S +E + ++
Sbjct: 474 VQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANK 533
Query: 452 RIIIY 456
+++ +
Sbjct: 534 KLVTF 538
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 126/293 (43%), Gaps = 28/293 (9%)
Query: 100 RLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEA 159
R+ + +W MVD L KN D M + +++ ++ Y R +EA
Sbjct: 196 RMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITG---YAQNNRIDEA 252
Query: 160 IMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEG 219
F VM E+D + N++++ + + A F+ + K + S+ ++ G
Sbjct: 253 DQLFQVMP----ERDFASWNTMITGFI-RNREMNKACGLFDRMPEK---NVISWTTMITG 304
Query: 220 WEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFL------LTLLRASQIEEVLRFLKVM 273
+ + +A F +M +R G K NV Y + L L+ QI +++
Sbjct: 305 YVENKENEEALNVFSKM-LRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQ 363
Query: 274 KDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEV 333
K+ L L+++ K + A ++D + +LI +N+MI + ++G
Sbjct: 364 KNEIVTSAL------LNMYSKSGELIAARKMFDNGLV--CQRDLISWNSMIAVYAHHGHG 415
Query: 334 DNAFRLLDEMVLHGAFPDSLTY-NMIFKCLVRNKKVRETESFFAEMVKNEWPP 385
A + ++M HG P ++TY N++F C V + FF ++V++E P
Sbjct: 416 KEAIEMYNQMRKHGFKPSAVTYLNLLFAC-SHAGLVEKGMEFFKDLVRDESLP 467
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 4/154 (2%)
Query: 276 HDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDN 335
HD F +T LD+F + ++ M G++ + + Y ++I ++G+VD
Sbjct: 120 HDHFT----YTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDG 175
Query: 336 AFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIA 395
A RL +EM +G P ++Y K L + +V E + EM+++ P +
Sbjct: 176 AMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLME 235
Query: 396 MLFDCDDPEAAHEIWSYMVENHVKPLHESANALL 429
L E A +I+ M E V+P + N L+
Sbjct: 236 YLVATGKCEEALDIFFKMQEIGVQPDKAACNILI 269
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 117/272 (43%), Gaps = 11/272 (4%)
Query: 28 HKPNEFPTH-LDTPNV--SPVARTLCNLLTRTSPPEIETALTSSGIHPSDDCVREVLKLS 84
KP T L P+V + + N+L ++ + L G+ + VLK +
Sbjct: 40 QKPKLVKTQTLPDPSVYTRDIVSNIYNILKYSNWDSAQEQLPHLGVRWDSHIINRVLK-A 98
Query: 85 YNYPHSAVKFFRWAGRLQ--KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLT-LR 141
+ A FF WA +++ KH + M+D+ G+ M+ MK++GVL
Sbjct: 99 HPPMQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTV 158
Query: 142 TFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEE 201
T+ S +G + A+ ++ M ++G E VV+ + + + + + A E ++E
Sbjct: 159 TYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFAD-GRVEEATEVYKE 217
Query: 202 -VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRA 260
++ +++P+ ++ +L+E G +A F +M +G + A + + L+
Sbjct: 218 MLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQ-EIGVQPDKA-ACNILIAKALKF 275
Query: 261 SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVF 292
+ + R L MK++ F AL+
Sbjct: 276 GETSFMTRVLVYMKENGVVLRYPIFVEALETL 307
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 67/175 (38%)
Query: 244 KENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIP 303
K + Y L A +I+ + +MK+ +T + D A+
Sbjct: 119 KHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMR 178
Query: 304 LWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLV 363
LW+ M G P ++ Y A + + +G V+ A + EM+ P+ TY ++ + LV
Sbjct: 179 LWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLV 238
Query: 364 RNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHV 418
K E F +M + P + C IA + + YM EN V
Sbjct: 239 ATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGV 293
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 127/291 (43%), Gaps = 35/291 (12%)
Query: 108 AWN-LMVDLL--GKNELFDPMWDAIR---SMKQEGVLTLRTFVSAFQSYCV-AGRFNEAI 160
AWN LMV + GKNE +AIR M+++GV R VS S G E
Sbjct: 241 AWNALMVGYVQNGKNE------EAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGK 294
Query: 161 MSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKI-APDGDSFAILLEG 219
S + +G+E D + SLL+ C +E+ E V ++ D ++ +++ G
Sbjct: 295 QSHAIAIVNGMELDNILGTSLLNFYC-----KVGLIEYAEMVFDRMFEKDVVTWNLIISG 349
Query: 220 WEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLL-TLLRASQIEEVLRFLKVMK---- 274
+ ++G A + + + YD L TL+ A+ E L+ K ++
Sbjct: 350 YVQQGLVEDA-------IYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCI 402
Query: 275 DHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVD 334
H + + +D++ K A ++D+ V +LI++N ++ +G
Sbjct: 403 RHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVE----KDLILWNTLLAAYAESGLSG 458
Query: 335 NAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPP 385
A RL M L G P+ +T+N+I L+RN +V E + F +M + P
Sbjct: 459 EALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIP 509
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 138/330 (41%), Gaps = 22/330 (6%)
Query: 149 SYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGK-IA 207
S +GR EA+ + M + GI + + S+L E + + F+E GK +
Sbjct: 257 SLAKSGRAFEALEVLEEMKDKGIP-ESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLL 315
Query: 208 PDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLL----RASQI 263
D + ++ + +EGN +TT E+V K + D L ++ +
Sbjct: 316 KDPEMCLKVVLMYVREGNM---ETTL-EVV--AAMRKAELKVTDCILCAIVNGFSKQRGF 369
Query: 264 EEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAM 323
E ++ + +C G + A++ + + A L+D MV G ++ Y+ +
Sbjct: 370 AEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNI 429
Query: 324 IGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEW 383
+ + + +A RL+ +M G P+ YN + R +R E + EM + +
Sbjct: 430 MDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKV 489
Query: 384 PPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICS-LSRFSEVR 442
P + + I+ + E E++ N K + + +++G+ S SR E+
Sbjct: 490 LPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGK-IDRAMAGIMVGVFSKTSRIDELM 548
Query: 443 RHAEDM------LDRRIIIYESTMNKLKDA 466
R +DM LD R +Y S +N L+DA
Sbjct: 549 RLLQDMKVEGTRLDAR--LYSSALNALRDA 576
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 38/265 (14%)
Query: 200 EEVKGKIAPDGDSFAI-----LLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFL 254
+E+ GK+ +G + LL+ + K G+ +A+ F G SK+N +++ A L
Sbjct: 285 KEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFN------GMSKKNSVSWSALL 338
Query: 255 LTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAM----VA 310
+ + E+ + + M++ D Y +K A+ L + V
Sbjct: 339 GGYCQNGEHEKAIEIFREMEEKD--------LYCFGTVLKACAGLAAVRLGKEIHGQYVR 390
Query: 311 GGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRE 370
G N+I+ +A+I L +G +D+A R+ +M + + +T+N + L +N + E
Sbjct: 391 RGCFGNVIVESALIDLYGKSGCIDSASRVYSKM----SIRNMITWNAMLSALAQNGRGEE 446
Query: 371 TESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMV----ENHVKPLHESAN 426
SFF +MVK P + + IA+L C E +Y V +KP E +
Sbjct: 447 AVSFFNDMVKKGIKP---DYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYS 503
Query: 427 ALLIGICSLSRFSEVRRHAEDMLDR 451
++ + F E AE++L+R
Sbjct: 504 CMIDLLGRAGLFEE----AENLLER 524
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 8/147 (5%)
Query: 244 KENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTY--ALDVFVKENDAAHA 301
K +V+ Y++ L L RA + E+L L MK+ DC + TY L+ K
Sbjct: 209 KPDVITYNSVLDILGRAGLVNEILGVLSTMKE-DCSVSVNIITYNTVLNGMRKACRFDMC 267
Query: 302 IPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKC 361
+ +++ MV GI P+L+ Y A+I +G V + RL DEM P Y + C
Sbjct: 268 LVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDC 327
Query: 362 LVRNKKVRETESFFAEMVKNEWPPTSS 388
L KK + +S A + +E TSS
Sbjct: 328 L---KKSGDFQS--ALQLSDELKNTSS 349
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Query: 262 QIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAG-GIMPNLIMY 320
QI++VL LK MK+ +C P + + LD+ + + + M + N+I Y
Sbjct: 192 QIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITY 251
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
N ++ D + +EMV G PD L+Y + L R+ V+E+ F EM +
Sbjct: 252 NTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQ 311
Query: 381 NEWPPTSSNCAAAIAMLFDCDDPEAAHEI 409
+ P+ A I L D ++A ++
Sbjct: 312 RQIRPSVYVYRALIDCLKKSGDFQSALQL 340
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 143/344 (41%), Gaps = 19/344 (5%)
Query: 91 AVKFFRWAGRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQS 149
A KFFR R+++ AWN ++ +N + + ++ M++EG+ L T+
Sbjct: 235 ATKFFR---RMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGG 291
Query: 150 YCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-KGKIAP 208
Y G+ + A+ M+ GI DV +++S + A++ F ++ + P
Sbjct: 292 YNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLI-HNGMRYQALDMFRKMFLAGVVP 350
Query: 209 DGDSFAILLEGWEKEGNAAKAKTTFGE---MVIRVGWSKENVMAYDAFLLTLLRASQIEE 265
+ A+ + + K E + +++G+ ++V+ ++ + + ++E+
Sbjct: 351 N----AVTIMSAVSACSCLKVINQGSEVHSIAVKMGFI-DDVLVGNSLVDMYSKCGKLED 405
Query: 266 VLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIG 325
+ +K+ D + + + + + A L+ M + PN+I +N MI
Sbjct: 406 ARKVFDSVKNKDVYT----WNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMIS 461
Query: 326 LQCNNGEVDNAFRLLDEMVLHGAFP-DSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWP 384
NG+ A L M G ++ T+N+I ++N K E F +M + +
Sbjct: 462 GYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFM 521
Query: 385 PTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANAL 428
P S + + + + EI ++ ++ +H NAL
Sbjct: 522 PNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNAL 565
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 98/246 (39%), Gaps = 10/246 (4%)
Query: 150 YCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPD 209
Y G +A FD M E+++ ++++ + E A F +K + PD
Sbjct: 125 YAKCGCIADARKVFDSMR----ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPD 180
Query: 210 GDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRF 269
F +L+G G+ K +VI++G S + ++ L + +++ +F
Sbjct: 181 DFLFPKILQGCANCGDVEAGKVIH-SVVIKLGMS-SCLRVSNSILAVYAKCGELDFATKF 238
Query: 270 LKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCN 329
+ M++ D + L + + A+ L M GI P L+ +N +IG
Sbjct: 239 FRRMRERDVIA----WNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQ 294
Query: 330 NGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSN 389
G+ D A L+ +M G D T+ + L+ N + F +M P +
Sbjct: 295 LGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVT 354
Query: 390 CAAAIA 395
+A++
Sbjct: 355 IMSAVS 360
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/386 (17%), Positives = 149/386 (38%), Gaps = 4/386 (1%)
Query: 109 WNLMVDLLGKNELFDPMWDAIRSMKQEGVL-TLRTFVSAFQSYCVAGRFNEAIMSFDVMD 167
+N +++ ++ D MK+ G T TF + + Y G+ E+ D+M
Sbjct: 392 FNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMML 451
Query: 168 NHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAILLEGWEKEGNA 226
+ + ++L C + + A +++ + PD +F L + + + G+
Sbjct: 452 RDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGST 511
Query: 227 AKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFT 286
A+ ++ K NV + ++EE LRF MK+ P L F
Sbjct: 512 CTAEDMIIPRMLH-NKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFN 570
Query: 287 YALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLH 346
+ F+ ND + D M G+ P+++ ++ ++ + G++ + +M+
Sbjct: 571 SLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEG 630
Query: 347 GAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAA 406
G PD ++++ K R + + E +M K P I+ + + A
Sbjct: 631 GIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKA 690
Query: 407 HEIWSYMVE-NHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMNKLKD 465
+++ M + P + L+ G + + +DM + ++ TM + D
Sbjct: 691 MQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIAD 750
Query: 466 AFYTEGRSRKDRFDSLFRRWKARVKL 491
+ + G S + ++L + KL
Sbjct: 751 GWKSIGVSNSNDANTLGSSFSTSSKL 776
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 82/200 (41%), Gaps = 2/200 (1%)
Query: 244 KENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIP 303
K + + ++A + + +++ ++ + MK+ C P F + + K +
Sbjct: 386 KPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSR 445
Query: 304 LWDAMVAGGIM-PNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCL 362
L D M+ ++ PN N ++ CN +++ A+ ++ +M +G PD +T+N + K
Sbjct: 446 LLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAY 505
Query: 363 VRNKKVRETES-FFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPL 421
R E M+ N+ P C + + E A + M E V P
Sbjct: 506 ARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPN 565
Query: 422 HESANALLIGICSLSRFSEV 441
N+L+ G +++ V
Sbjct: 566 LFVFNSLIKGFLNINDMDGV 585
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 128/314 (40%), Gaps = 13/314 (4%)
Query: 91 AVKFFRWAGRLQK--HSPHAWNLMVDLLGK-NELFDPMWDAIRSMKQEGV-LTLRTFVSA 146
+ FF W + H A++ MV ++ K + + I +K G + R F+
Sbjct: 55 TLNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRIIERLKISGCEIKPRVFLLL 114
Query: 147 FQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKI 206
+ + +++AI + M + G + A+N ++ + + N + A+E FE ++ +
Sbjct: 115 LEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMD-VNFKLNVVNGALEIFEGIRFR- 172
Query: 207 APDGDSFAILLEGW---EKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQI 263
+ SF I L + G+ K M+ + N + L R +
Sbjct: 173 --NFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYP--NRERFGQILRLCCRTGCV 228
Query: 264 EEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAM 323
E + + +M + ++ + F + + A+ L++ M+ G PNL+ Y ++
Sbjct: 229 SEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSL 288
Query: 324 IGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEW 383
I + G VD AF +L ++ G PD + N++ R + E F + K +
Sbjct: 289 IKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKL 348
Query: 384 PPTSSNCAAAIAML 397
P A+ ++ L
Sbjct: 349 VPDQYTFASILSSL 362
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 79/177 (44%), Gaps = 8/177 (4%)
Query: 103 KHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEG------VLTLRTFVSAFQSYCVAGRF 156
+ S A+N +++ L +N FD ++K+E + L TF YC G+F
Sbjct: 307 RMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKF 366
Query: 157 NEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAIL 216
EA+ F M + D ++ N+L++ +C E + E + + PD ++ +L
Sbjct: 367 EEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLL 426
Query: 217 LEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVM 273
++ KEG + + MV + N+ Y+ L++A ++++ F +M
Sbjct: 427 MDTCFKEGKIDEGAAYYKTMV--ESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMM 481
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 93/246 (37%), Gaps = 33/246 (13%)
Query: 178 VNSLLSSICCEENQTSTAMEFFEEVKGKIA---PDGDSFAILLEGWEKEGNAAKAKTTFG 234
V S L C + + ++ ++E+K K+ DG + L++G+ + +A +
Sbjct: 238 VYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYE 297
Query: 235 EMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVK 294
E V + + MAY+ L L + +E L+ +K
Sbjct: 298 EAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKE------------------ 339
Query: 295 ENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLT 354
H P A+ NL +N M+ C G+ + A + +M PD+L+
Sbjct: 340 -----HNPPRHLAV-------NLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLS 387
Query: 355 YNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMV 414
+N + L N+ + E E + EM + P + F + + MV
Sbjct: 388 FNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMV 447
Query: 415 ENHVKP 420
E++++P
Sbjct: 448 ESNLRP 453
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 2/181 (1%)
Query: 200 EEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLR 259
E VK +PD ++ ILL GN A + VG + V+ + + L R
Sbjct: 282 EMVKDGFSPDLYTYNILLHHLAT-GNKPLAALNLLNHMREVG-VEPGVIHFTTLIDGLSR 339
Query: 260 ASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIM 319
A ++E F+ C P + +T + ++ + A ++ M G +PN+
Sbjct: 340 AGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFT 399
Query: 320 YNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMV 379
YN+MI C G+ A LL EM G P+ + Y+ + L KV E +MV
Sbjct: 400 YNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMV 459
Query: 380 K 380
+
Sbjct: 460 E 460
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 86/222 (38%), Gaps = 4/222 (1%)
Query: 249 AYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAM 308
+Y+A L +LL Q + + + M + P + + + + L D M
Sbjct: 224 SYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEM 283
Query: 309 VAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKV 368
V G P+L YN ++ + A LL+ M G P + + + L R K+
Sbjct: 284 VKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKL 343
Query: 369 RETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANAL 428
+ F E VK P I + E A E++ M E P + N++
Sbjct: 344 EACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSM 403
Query: 429 LIGICSLSRFSEVRRHAEDMLDR----RIIIYESTMNKLKDA 466
+ G C +F E ++M R ++Y + +N LK+A
Sbjct: 404 IRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNA 445
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 1/141 (0%)
Query: 235 EMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVK 294
E++ G+ E + +Y + L +A ++ E L+ MK P + + ++ K
Sbjct: 386 ELLSSKGYFSE-LQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCK 444
Query: 295 ENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLT 354
A LWD M G NL YN +I GE + + RL D+M+ G PD
Sbjct: 445 AEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETI 504
Query: 355 YNMIFKCLVRNKKVRETESFF 375
Y + + L + K+ F
Sbjct: 505 YMSLIEGLCKETKIEAAMEVF 525
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/368 (17%), Positives = 135/368 (36%), Gaps = 38/368 (10%)
Query: 102 QKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGV-LTLRTFVSAFQSYCVAGRFNEAI 160
Q+ P N ++ L + +D M+ +GV L F +C + N+ +
Sbjct: 148 QEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLL 207
Query: 161 MSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAILLEG 219
D + + + + L+ C+ ++ A EE++ PD ++ ++ E
Sbjct: 208 RLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEA 267
Query: 220 WEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEV------------- 266
+ GN + + + ++G + + Y AF+L L+ A ++ E
Sbjct: 268 FVVTGNLYERQVVLKKKR-KLGVAPRS-SDYRAFILDLISAKRLTEAKEVAEVIVSGKFP 325
Query: 267 ---------------------LRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLW 305
+ FL M P ++ + + + + H I +
Sbjct: 326 MDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAY 385
Query: 306 DAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRN 365
+ + + G L Y+ MI C G V ++ L EM G PD YN + + +
Sbjct: 386 ELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKA 445
Query: 366 KKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESA 425
+ +R + + EM + I L + + E + ++ M+E ++P
Sbjct: 446 EMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIY 505
Query: 426 NALLIGIC 433
+L+ G+C
Sbjct: 506 MSLIEGLC 513
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 77/179 (43%), Gaps = 1/179 (0%)
Query: 257 LLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPN 316
L R + + +++ +++ F L+ ++ + K + M G+ P+
Sbjct: 372 LCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPD 431
Query: 317 LIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFA 376
+ +YNA+I C + A +L DEM + G + TYN++ + L + E+ F
Sbjct: 432 VSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFD 491
Query: 377 EMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVE-NHVKPLHESANALLIGICS 434
+M++ P + + I L EAA E++ +E +H + ++ +CS
Sbjct: 492 KMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCS 550
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 118/275 (42%), Gaps = 11/275 (4%)
Query: 114 DLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEK 173
DL +LFD M + R +K + T T +S + V R A+ F+ M + G E
Sbjct: 190 DLEKSEKLFDEMLE--RGIKPDNA-TFTTIISCARQNGVPKR---AVEWFEKMSSFGCEP 243
Query: 174 DVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAILLEGWEKEGNAAKAKTT 232
D V + +++ + N A+ ++ + K D +F+ L+ + GN
Sbjct: 244 DNVTMAAMIDAYGRAGN-VDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNI 302
Query: 233 FGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVF 292
+ EM + K N++ Y+ + ++ RA + + K + + P + + +
Sbjct: 303 YEEM--KALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAY 360
Query: 293 VKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMV-LHGAFPD 351
+ A+ ++ M G+ +I+YN ++ + +N VD AF + +M PD
Sbjct: 361 GRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPD 420
Query: 352 SLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPT 386
S T++ + + +V E E+ +M + + PT
Sbjct: 421 SWTFSSLITVYACSGRVSEAEAALLQMREAGFEPT 455
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 87/225 (38%), Gaps = 3/225 (1%)
Query: 164 DVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKGKIAPDGDSFAILLEGWEKE 223
D +GI+ D V+ N + S C M E K + PD ++ L+ K
Sbjct: 166 DAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKH 225
Query: 224 GNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLK 283
+ MV++ K N+ ++ + L+ + + L +M P
Sbjct: 226 ERCVIGNGLWNLMVLK--GCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSI 283
Query: 284 FFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEM 343
+ + F A ++ AM G PNL +Y MI C G D A+ + +
Sbjct: 284 TYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDC 343
Query: 344 VLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSS 388
+ +P+ T M+ K LV+ ++ + +S E+V PP S
Sbjct: 344 MRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIM-ELVHRRVPPFRS 387
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 75/188 (39%), Gaps = 3/188 (1%)
Query: 202 VKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRAS 261
V + PD + I + + G +AK E+ + S + Y+ L L +
Sbjct: 151 VNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEK--HSPPDTYTYNFLLKHLCKCK 208
Query: 262 QIEEVLRFLKVMKDH-DCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMY 320
+ V F+ M+D D P L FT +D + A+ L + G P+ +Y
Sbjct: 209 DLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLY 268
Query: 321 NAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
N ++ C + A + +M G PD +TYN + L + +V E + MV
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD 328
Query: 381 NEWPPTSS 388
+ P ++
Sbjct: 329 AGYEPDTA 336
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/286 (19%), Positives = 113/286 (39%), Gaps = 7/286 (2%)
Query: 92 VKFFRWAGRLQKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYC 151
++ F W + K S ++ + +G + + + +S+ E + ++ C
Sbjct: 118 IQLFEWMQQHGKISVSTYSSCIKFVGAKNVSKAL-EIYQSIPDEST-KINVYICNSILSC 175
Query: 152 VA--GRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAMEFFEEV-KGKIAP 208
+ G+ + I FD M G++ DVV N+LL+ +N A+E E+ I
Sbjct: 176 LVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQM 235
Query: 209 DGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLR 268
D + +L G + +A+ +M +V N+ Y + L + ++
Sbjct: 236 DSVMYGTVLAICASNGRSEEAENFIQQM--KVEGHSPNIYHYSSLLNSYSWKGDYKKADE 293
Query: 269 FLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQC 328
+ MK P T L V++K + L + + G N + Y ++
Sbjct: 294 LMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLS 353
Query: 329 NNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESF 374
G+++ A + D+M G D +++ L R+K+ +E +
Sbjct: 354 KAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKEL 399
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 79/205 (38%), Gaps = 29/205 (14%)
Query: 196 MEFFEEVKGK-IAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFL 254
ME F E+ + + + ++ L++G + G+ A+ F EMV ++M Y+ L
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSD--GVPPDIMTYNILL 58
Query: 255 LTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIM 314
L + ++E+ L KV D F L G+
Sbjct: 59 DGLCKNGKLEKALVAGKVEDGWDLFCSLSL--------------------------KGVK 92
Query: 315 PNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESF 374
PN++ Y MI C G + A+ L +M G PDS TYN + + +R+ +
Sbjct: 93 PNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 152
Query: 375 FAEMVKNEWPPTSSNCAAAIAMLFD 399
EM + +S ML D
Sbjct: 153 IKEMRSCRFAGDASTYGLVTDMLHD 177
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 81/204 (39%), Gaps = 5/204 (2%)
Query: 250 YDAFLLTLLRASQIEEVLRFLKVMK---DHDCFPGLKFFTYALDVFVKENDAAHAIPLWD 306
Y + ++ ++ + R L+ M+ D + P +T + FV A +
Sbjct: 417 YTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLA 476
Query: 307 AMVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLH-GAFPDSLTYNMIFKCLVRN 365
M G+ N I YN ++ C ++D A LL EM G PD ++YN+I +
Sbjct: 477 EMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILI 536
Query: 366 KKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVEN-HVKPLHES 424
+FF EM PT + + P+ A+ ++ M+ + VK +
Sbjct: 537 DDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIA 596
Query: 425 ANALLIGICSLSRFSEVRRHAEDM 448
N L+ G C L + +R M
Sbjct: 597 WNMLVEGYCRLGLIEDAQRVVSRM 620
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%)
Query: 267 LRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGL 326
L L MK+ P + +T +D +V + A ++ M G +PN+ YN+MI
Sbjct: 709 LTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRG 768
Query: 327 QCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVK 380
C GE A LL EM G P+ + Y+ + L + K+ E EMVK
Sbjct: 769 LCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVK 822
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 66/175 (37%), Gaps = 7/175 (4%)
Query: 250 YDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMV 309
++A L+ +AS+ ++ K M D+ P + + L K A +W+ M+
Sbjct: 461 WNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMI 520
Query: 310 AGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVR 369
GI PNL Y M + + + LL EM G P +T+N + RN
Sbjct: 521 KVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSG 580
Query: 370 ETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHES 424
+F M P I L + P A+E+ HVK +E
Sbjct: 581 VAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYEL-------HVKAQNEG 628
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 115/271 (42%), Gaps = 27/271 (9%)
Query: 163 FDVMDNHGIEKDVVAVNSL---LSSICCEENQTSTAMEFFEE------VKGKIAPDGDSF 213
F +M GI DVV V SL ++ +CC + + A E EE VK I
Sbjct: 197 FSLMVESGI--DVVTVYSLTVVVTVLCCN-GEITRARELVEEMGLVKGVKANIVTFKSMI 253
Query: 214 AILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVM----AYDAFLLTLLRASQIEEVLRF 269
++ W+ E ++V+++ KE+VM +Y + ++EE R
Sbjct: 254 GCCVKRWDFEE---------LDLVLKL-MEKESVMLDLDSYKVLIDGFTSYGKVEEAERL 303
Query: 270 LKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIGLQCN 329
+ +M D + ++ + + I L+ M + G+ PN Y ++ C
Sbjct: 304 VLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCK 363
Query: 330 NGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSN 389
G+V A L+E+ ++ D Y+ + + R + ++ AEM+++ + P ++
Sbjct: 364 AGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATI 423
Query: 390 CAAAIAMLFDCDDPEAAHEIWSYMVENHVKP 420
C LF+ + EA I + +V+ +KP
Sbjct: 424 CERLADSLFEVNRKEAQMLI-TIVVKCGIKP 453
>AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=773
Length = 773
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 84/209 (40%), Gaps = 22/209 (10%)
Query: 250 YDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMV 309
Y+ L +LL A++ + V+ K MK C + + +D + A L M+
Sbjct: 528 YNIVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMI 587
Query: 310 AGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVR 369
G P + + A++ + N+ + A LLD+ L D L+YN I + +
Sbjct: 588 RDGFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMID 647
Query: 370 ETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALL 429
E +M + + P DP H ++S VE K H +A L
Sbjct: 648 VIEYIVEQMHREKVNP----------------DPTTCHYVFSCYVE---KGYHATAIEAL 688
Query: 430 IGICSLSRFSEVRRHAEDMLDRRIIIYES 458
+ SL +E + E + D++I + E+
Sbjct: 689 -NVLSLRMLNEEDK--ESLQDKKIELEEN 714
>AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=801
Length = 801
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 84/209 (40%), Gaps = 22/209 (10%)
Query: 250 YDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMV 309
Y+ L +LL A++ + V+ K MK C + + +D + A L M+
Sbjct: 556 YNIVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMI 615
Query: 310 AGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVR 369
G P + + A++ + N+ + A LLD+ L D L+YN I + +
Sbjct: 616 RDGFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMID 675
Query: 370 ETESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALL 429
E +M + + P DP H ++S VE K H +A L
Sbjct: 676 VIEYIVEQMHREKVNP----------------DPTTCHYVFSCYVE---KGYHATAIEAL 716
Query: 430 IGICSLSRFSEVRRHAEDMLDRRIIIYES 458
+ SL +E + E + D++I + E+
Sbjct: 717 -NVLSLRMLNEEDK--ESLQDKKIELEEN 742
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 6/130 (4%)
Query: 263 IEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNA 322
+++ K + H P + + + F +D + A L+ M+ ++P++ Y
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 323 MIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE 382
+I C G+V+ A LLD+M+ G PD + L E + + EM+
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKG 286
Query: 383 WPP--TSSNC 390
+ P + SNC
Sbjct: 287 FSPHFSVSNC 296
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 75/191 (39%), Gaps = 5/191 (2%)
Query: 283 KFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNAMIG-LQCNNGEVDNAFRLLD 341
+ FTY + V+ + + + M+ P N ++ L + G + AF L
Sbjct: 120 EIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFK 179
Query: 342 EMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNEWPPTSSNCAAAIAMLFDCD 401
LHG P++ +YN++ + N + F +M++ + P + I
Sbjct: 180 SSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKG 239
Query: 402 DPEAAHEIWSYMVENHVKPLHESANALLIGICSLSRFSEVRRHAEDMLDRRIIIYESTMN 461
A E+ M+ P L+ G+C F E +++ E+M+ + + S N
Sbjct: 240 QVNGAMELLDDMLNKGFVP----DRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSN 295
Query: 462 KLKDAFYTEGR 472
L F + G+
Sbjct: 296 CLVKGFCSFGK 306
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/371 (18%), Positives = 149/371 (40%), Gaps = 41/371 (11%)
Query: 52 LLTRTSPPEIET---ALTSSGIHPSDDCVREVL-----KLSYNYPHSAVKFFRWAGRLQK 103
L+ R P E +T L +G PS +L + Y S V +G K
Sbjct: 55 LIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG--TK 112
Query: 104 HSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGV-LTLRTFVSAFQSYCVAGRFNEAIMS 162
+N +++ ++ + A+ MK+ G+ T T+ + + Y +AG+ +
Sbjct: 113 LDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSEL 172
Query: 163 FDVMDNHG---IEKDVVAVNSLLSSICCEENQTSTAMEFFEEVKG-KIAPDGDSFAILLE 218
D+M G + ++ N L+ + C ++ + A E ++++ + PD ++ +
Sbjct: 173 LDLMLEEGNVDVGPNIRTFNVLVQAWC-KKKKVEEAWEVVKKMEECGVRPDTVTYNTIAT 231
Query: 219 GWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLLRASQIEEVLRFLKVMKDHDC 278
+ ++G +A++ E ++ +K N + R ++ + LRF++ MK+
Sbjct: 232 CYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRV 291
Query: 279 FPGLKFFTYALDVFVKEND-------------------------AAHAIPLWDAMVAGGI 313
L F ++ FV+ D + + M +
Sbjct: 292 EANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNV 351
Query: 314 MPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETES 373
++I Y+ ++ + G ++ A ++ EMV G PD+ Y+++ K VR K+ ++ E
Sbjct: 352 KADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEE 411
Query: 374 FFAEMVKNEWP 384
++ P
Sbjct: 412 LLETLIVESRP 422
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 93/232 (40%), Gaps = 21/232 (9%)
Query: 132 MKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQ 191
MK++ RT YC GR + + M +E ++V NSL++
Sbjct: 252 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLING------- 304
Query: 192 TSTAMEFFEEVKGKIAPDGDSFAILLEGWEKE----GNAAKAKTTFGEMVIRVGWSKENV 247
F EV + D + +LL + +E GN K K ++ K +V
Sbjct: 305 -------FVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQ-KMKVQVLTLMKECN-VKADV 355
Query: 248 MAYDAFLLTLLRASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDA 307
+ Y + A +E+ + K M P ++ +V+ + A L +
Sbjct: 356 ITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLET 415
Query: 308 MVAGGIMPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIF 359
++ PN++++ +I C+NG +D+A R+ ++M G P+ T+ +
Sbjct: 416 LIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLM 466
>AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5213290-5215296 FORWARD
LENGTH=668
Length = 668
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 18/149 (12%)
Query: 43 SPVARTLCNLLTRTS-PPEIETALTSSGIHPSDDCVREVLKLSYNYPHSAVKFFRWAGRL 101
S T+ ++ +R S EI L SSG+ S D +VL+ + P A FF+W
Sbjct: 84 SSAEATVIDIFSRLSGEDEIRKELESSGVVISQDLALKVLRKLESNPDVAKSFFQWIKEA 143
Query: 102 --QKHSPHAWNLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEA 159
++ S +N+M+ +LG N L D W + MK++G +SA V +F +
Sbjct: 144 SPEELSSKNYNMMLRILGGNGLVDEFWGLVDVMKKKG-----HGLSANVRDKVGDKFQK- 197
Query: 160 IMSFDVMDNHGIEKDVVAVNSLLSSICCE 188
G+E D++ + L +S C +
Sbjct: 198 ---------DGLESDLLRLRKLFTSDCLD 217
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 127/320 (39%), Gaps = 37/320 (11%)
Query: 138 LTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNHGIEKDVVAVNSLLSSICCEENQTSTAME 197
L L S Y GR +A FD +DVV+ +L+ A +
Sbjct: 167 LDLYVHTSLISMYVQNGRLEDAHKVFD----KSPHRDVVSYTALIKGYA-SRGYIENAQK 221
Query: 198 FFEEVKGKIAPDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTL 257
F+E+ K D S+ ++ G+ + GN +A F +M+ K NV ++ ++T+
Sbjct: 222 LFDEIPVK---DVVSWNAMISGYAETGNYKEALELFKDMM------KTNVRPDESTMVTV 272
Query: 258 LRA----SQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGI 313
+ A IE + + DH LK +D++ K + A L++ +
Sbjct: 273 VSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP---- 328
Query: 314 MPNLIMYNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKV---RE 370
++I +N +IG + A L EM+ G P+ +T I + R
Sbjct: 329 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 388
Query: 371 TESFFAEMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLI 430
+ + +K SS + I M C D EAAH++++ ++ + S NA++
Sbjct: 389 IHVYIDKRLKGV-TNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL----SSWNAMIF 443
Query: 431 GI-------CSLSRFSEVRR 443
G S FS +R+
Sbjct: 444 GFAMHGRADASFDLFSRMRK 463
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/364 (20%), Positives = 142/364 (39%), Gaps = 44/364 (12%)
Query: 110 NLMVDLLGKNELFDPMWDAIRSMKQEGVLTLRTFVSAFQSYCVAGRFNEAIMSFDVMDNH 169
N ++ + +N + SMK L ++ S SY G ++AI D M+
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDR---NLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 170 GIEKDVVAVNSLLSSICCEENQTSTAMEFFEEVK-GKIAPDGDSFAILLEGWEKEGNAAK 228
G++ D+V NSLLS + + A+ + ++ + P S + LL+ + G+
Sbjct: 185 GLKPDIVTWNSLLSGYA-SKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 229 AK------------------TTFGEMVIRVGW-----------SKENVMAYDAFLLTLLR 259
K TT +M I+ G+ +N++A+++ + L
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSY 303
Query: 260 ASQIEEVLRFLKVMKDHDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIM 319
A +++ + M+ P + + A+ + M G+ PN++
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVS 363
Query: 320 YNAMIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFK---CLVRNKKVRETESFFA 376
+ A+ NG NA ++ +M G P++ T + + K CL +E F
Sbjct: 364 WTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGF-- 421
Query: 377 EMVKNEWPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLIGICSLS 436
++ + A + M D ++A EI+ + ++N K L S N +L+G
Sbjct: 422 -CLRKNLICDAYVATALVDMYGKSGDLQSAIEIF-WGIKN--KSL-ASWNCMLMGYAMFG 476
Query: 437 RFSE 440
R E
Sbjct: 477 RGEE 480
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 113/272 (41%), Gaps = 13/272 (4%)
Query: 208 PDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLL----RASQI 263
PD ++ L+ K+G A F EM + + + Y+A + L +A +
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEM--KNSGCRPDASVYNALITAHLHTRDKAKAL 188
Query: 264 EEVLRFLKVMKD-HDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNA 322
E+V +L MK C P + + L F + L+ + + P++ +N
Sbjct: 189 EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 323 MIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE 382
++ NG + +L M + PD +T+N++ + ++ + E F +++++
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Query: 383 WPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLI--GIC-SLSRFS 439
PT + I + A ++ M + + P + +++ G C S+SR
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAR 368
Query: 440 EVRRHAEDMLDRRIIIYESTMNKLKDAFYTEG 471
E+ E++ + ++ ST+N + + + G
Sbjct: 369 EI---FEEVGESDRVLKASTLNAMLEVYCRNG 397
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 113/272 (41%), Gaps = 13/272 (4%)
Query: 208 PDGDSFAILLEGWEKEGNAAKAKTTFGEMVIRVGWSKENVMAYDAFLLTLL----RASQI 263
PD ++ L+ K+G A F EM + + + Y+A + L +A +
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEM--KNSGCRPDASVYNALITAHLHTRDKAKAL 188
Query: 264 EEVLRFLKVMKD-HDCFPGLKFFTYALDVFVKENDAAHAIPLWDAMVAGGIMPNLIMYNA 322
E+V +L MK C P + + L F + L+ + + P++ +N
Sbjct: 189 EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 323 MIGLQCNNGEVDNAFRLLDEMVLHGAFPDSLTYNMIFKCLVRNKKVRETESFFAEMVKNE 382
++ NG + +L M + PD +T+N++ + ++ + E F +++++
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Query: 383 WPPTSSNCAAAIAMLFDCDDPEAAHEIWSYMVENHVKPLHESANALLI--GIC-SLSRFS 439
PT + I + A ++ M + + P + +++ G C S+SR
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAR 368
Query: 440 EVRRHAEDMLDRRIIIYESTMNKLKDAFYTEG 471
E+ E++ + ++ ST+N + + + G
Sbjct: 369 EI---FEEVGESDRVLKASTLNAMLEVYCRNG 397