Miyakogusa Predicted Gene

Lj0g3v0349569.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0349569.1 Non Chatacterized Hit- tr|I3S5S1|I3S5S1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.16,0,vATP-synt_E,ATPase, V1/A1 complex, subunit E; VACUOLAR
ATP SYNTHASE SUBUNIT E,NULL,CUFF.24023.1
         (163 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G11150.1 | Symbols: TUF, emb2448, TUFF, VHA-E1 | vacuolar ATP...   240   3e-64
AT1G64200.1 | Symbols: VHA-E3 | vacuolar H+-ATPase subunit E iso...   232   7e-62
AT3G08560.1 | Symbols: VHA-E2 | vacuolar H+-ATPase subunit E iso...   197   2e-51

>AT4G11150.1 | Symbols: TUF, emb2448, TUFF, VHA-E1 | vacuolar ATP
           synthase subunit E1 | chr4:6800091-6801696 FORWARD
           LENGTH=230
          Length = 230

 Score =  240 bits (613), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 119/162 (73%), Positives = 132/162 (81%)

Query: 1   IEYSMQLNASRIKVLQAQDDVVNKMKESATKELLNAGRDHHVYKNLLKDLIVQGLLRLKE 60
           I+YSMQLNASRIKVLQAQDD+VN MK+ A K+LLN  RD + YK LLKDLIVQ LLRLKE
Sbjct: 68  IDYSMQLNASRIKVLQAQDDIVNAMKDQAAKDLLNVSRDEYAYKQLLKDLIVQCLLRLKE 127

Query: 61  PAVLLRCRKDDLQLVEAVLDSAAEEYAGKANVNQPEIIVDHNIYLPSAPSHYESHEPYCS 120
           P+VLLRCR++DL LVEAVLD A EEYAGKA V+ PE+ VD  I+LP  P   + H  +CS
Sbjct: 128 PSVLLRCREEDLGLVEAVLDDAKEEYAGKAKVHAPEVAVDTKIFLPPPPKSNDPHGLHCS 187

Query: 121 GGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFGQVA 162
           GGVVLASRDGKIVCENTLDARLDV FR KLP IRK LFGQV 
Sbjct: 188 GGVVLASRDGKIVCENTLDARLDVAFRMKLPVIRKSLFGQVT 229


>AT1G64200.1 | Symbols: VHA-E3 | vacuolar H+-ATPase subunit E
           isoform 3 | chr1:23828537-23830002 REVERSE LENGTH=237
          Length = 237

 Score =  232 bits (592), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 117/168 (69%), Positives = 135/168 (80%), Gaps = 6/168 (3%)

Query: 1   IEYSMQLNASRIKVLQAQDDVVNKMKESATKELLNAGRD------HHVYKNLLKDLIVQG 54
           I+YSMQLNASRIKVLQAQDD+VN MKE A K+LL   +       HH YK+LLKDLIVQ 
Sbjct: 68  IDYSMQLNASRIKVLQAQDDIVNAMKEEAAKQLLKVSQHGFFNHHHHQYKHLLKDLIVQC 127

Query: 55  LLRLKEPAVLLRCRKDDLQLVEAVLDSAAEEYAGKANVNQPEIIVDHNIYLPSAPSHYES 114
           LLRLKEPAVLLRCR++DL +VE++LD A+EEY  KA V+ PEIIVD +I+LP APS  + 
Sbjct: 128 LLRLKEPAVLLRCREEDLDIVESMLDDASEEYCKKAKVHAPEIIVDKDIFLPPAPSDDDP 187

Query: 115 HEPYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFGQVA 162
           H   C+GGVVLASRDGKIVCENTLDARL+V FR KLPEIRK LFG+V 
Sbjct: 188 HALSCAGGVVLASRDGKIVCENTLDARLEVAFRNKLPEIRKSLFGKVG 235


>AT3G08560.1 | Symbols: VHA-E2 | vacuolar H+-ATPase subunit E
           isoform 2 | chr3:2600130-2601907 FORWARD LENGTH=235
          Length = 235

 Score =  197 bits (502), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 99/161 (61%), Positives = 124/161 (77%), Gaps = 2/161 (1%)

Query: 1   IEYSMQLNASRIKVLQAQDDVVNKMKESATKELLNAGRDHHVYKNLLKDLIVQGLLRLKE 60
           I+YS QLNASRIK LQAQDDVV  MK+SA K+LL    D + YK LLK LI++ LLRLKE
Sbjct: 68  IDYSTQLNASRIKYLQAQDDVVTAMKDSAAKDLLRVSNDKNNYKKLLKSLIIESLLRLKE 127

Query: 61  PAVLLRCRKDDLQLVEAVLDSAAEEYAGKANVNQPEIIVDHNIY--LPSAPSHYESHEPY 118
           P+VLLRCR+ D ++VE+V++ A  +YA KA V  P+I +D  ++   P  P   +SH+P+
Sbjct: 128 PSVLLRCREMDKKVVESVIEDAKRQYAEKAKVGSPKITIDEKVFLPPPPNPKLPDSHDPH 187

Query: 119 CSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFG 159
           CSGGVVLAS+DGKIVCENTLDARLDV FR+KLP+IR +L G
Sbjct: 188 CSGGVVLASQDGKIVCENTLDARLDVAFRQKLPQIRTRLVG 228