Miyakogusa Predicted Gene
- Lj0g3v0349149.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0349149.2 tr|F6LPU5|F6LPU5_MEDTR Rop guanine nucleotide
exchange factor OS=Medicago truncatula
GN=MTR_5g081410,78.44,0,PRONE,Plant specific Rop nucleotide exchanger,
PRONE; seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT,CUFF.23987.2
(378 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G05940.1 | Symbols: ATROPGEF5, ROPGEF5 | ROP guanine nucleoti... 385 e-107
AT5G02010.1 | Symbols: ATROPGEF7, ROPGEF7 | RHO guanyl-nucleotid... 339 1e-93
AT3G55660.1 | Symbols: ATROPGEF6, ROPGEF6 | ROP (rho of plants) ... 305 3e-83
AT4G38430.1 | Symbols: ATROPGEF1, ROPGEF1 | rho guanyl-nucleotid... 274 8e-74
AT1G01700.1 | Symbols: ATROPGEF2, ROPGEF2 | RHO guanyl-nucleotid... 249 3e-66
AT4G00460.2 | Symbols: ATROPGEF3, ROPGEF3 | RHO guanyl-nucleotid... 248 4e-66
AT2G45890.1 | Symbols: ATROPGEF4, ROPGEF4, RHS11 | RHO guanyl-nu... 233 1e-61
AT1G52240.1 | Symbols: ATROPGEF11, ROPGEF11, PIRF1 | RHO guanyl-... 223 1e-58
AT3G24620.1 | Symbols: ATROPGEF8, ROPGEF8 | RHO guanyl-nucleotid... 218 4e-57
AT4G13240.1 | Symbols: ATROPGEF9, ROPGEF9 | RHO guanyl-nucleotid... 216 2e-56
AT1G79860.1 | Symbols: ATROPGEF12, ROPGEF12, MEE64 | RHO guanyl-... 210 1e-54
AT5G19560.1 | Symbols: ATROPGEF10, ROPGEF10 | ROP uanine nucleot... 207 1e-53
AT3G16130.1 | Symbols: ATROPGEF13, ROPGEF13, PIRF2 | RHO guanyl-... 204 6e-53
AT1G31650.1 | Symbols: ATROPGEF14, ROPGEF14 | RHO guanyl-nucleot... 159 4e-39
AT4G00460.1 | Symbols: ATROPGEF3, ROPGEF3 | RHO guanyl-nucleotid... 119 3e-27
>AT5G05940.1 | Symbols: ATROPGEF5, ROPGEF5 | ROP guanine nucleotide
exchange factor 5 | chr5:1786028-1788363 FORWARD
LENGTH=611
Length = 611
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/353 (55%), Positives = 250/353 (70%), Gaps = 14/353 (3%)
Query: 1 MLLDILDSYKAKEFWYVDQGIVSQDADGSASFRKRIQREEEKWWLPVPQVPPAGLSDNSR 60
MLLDIL S+K EFWYVDQGIV+ + DGSASFR++IQR+EEKWWLPVP++ P GL++ +R
Sbjct: 215 MLLDILASFKKTEFWYVDQGIVASENDGSASFRRKIQRQEEKWWLPVPRLAPNGLTEEAR 274
Query: 61 KQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYITSEQFX 120
+LNH RECA+QILKAAM+IN AL EM+VP+SYLE LPKNGR+CLGD IYRY+TS++F
Sbjct: 275 TELNHKRECATQILKAAMAINSLALTEMDVPKSYLETLPKNGRSCLGDVIYRYVTSDKFS 334
Query: 121 XXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXX--XXWEIVKDFM 178
H+AL+IANRVEASI+VW WE+VK+ M
Sbjct: 335 AESLLDCLDLSSEHIALDIANRVEASIYVWRRRVQTKLGVNNNTSSTTPKLTWEMVKELM 394
Query: 179 ADGDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYSRVLESMAF 238
A GDKR LL ER+E +L LKQRFP LTQT+LD SKIQ NKD+GK+ILE YSR LES+A
Sbjct: 395 AAGDKRGLLVERSETLLRCLKQRFPSLTQTSLDISKIQWNKDIGKSILESYSRALESLAS 454
Query: 239 NIVARIDDLLYVDDLTKHSDRFPLV--PPTVNVVSQQK-LSRSMAVSVSGTPHK-ALSPV 294
NI+ARIDDLLYVDDLTK SD L+ P ++++ +K + +S SGTP++ + S
Sbjct: 455 NIIARIDDLLYVDDLTKQSDDNNLLSSPAVSSIIAHKKVVPLPYLISASGTPYRTSFSTT 514
Query: 295 P-----LISPARGDRERTPFLNINNNNIIKPQ--RRGFGVRRALSNYLGGETK 340
P +ISP +G+R RTP+ + + N II+ RG+GVRR L+NYLG E+K
Sbjct: 515 PGFSPSMISPKKGER-RTPYSSKDTNKIIEKGLPSRGYGVRRVLNNYLGMESK 566
>AT5G02010.1 | Symbols: ATROPGEF7, ROPGEF7 | RHO guanyl-nucleotide
exchange factor 7 | chr5:383493-385698 FORWARD
LENGTH=546
Length = 546
Score = 339 bits (870), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 171/296 (57%), Positives = 212/296 (71%), Gaps = 12/296 (4%)
Query: 1 MLLDILDSYKAKEFWYVDQGIVSQD--ADGSASFRKRIQREEEKWWLPVPQVPPAGLSDN 58
MLL+ILDS++ EFWYVDQGI++ + ADGS+SFRK QR+E+KWWLPVP+V P GL +N
Sbjct: 183 MLLEILDSFEETEFWYVDQGIMAHESAADGSSSFRKSFQRQEDKWWLPVPRVSPGGLQEN 242
Query: 59 SRKQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYITSEQ 118
SRKQL H R+C +QILKAAM+IN LA+ME+PESYLE+LP+ GR+CLGD IYRYI+S+Q
Sbjct: 243 SRKQLQHKRDCTNQILKAAMAINSITLADMEIPESYLESLPRKGRSCLGDLIYRYISSDQ 302
Query: 119 FXXXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXWEIVKDFM 178
F H A+EIANRVE+SI++W WE+VK+ M
Sbjct: 303 FSPECLLDCLDLSSEHQAIEIANRVESSIYLW-----HKRTNSKPATNTKTSWEMVKELM 357
Query: 179 ADGDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYSRVLESMAF 238
D DK EL+A+RAE++LLSLKQRFPGL QT LD SKIQ NKD+GK+ILE YSRVLES+AF
Sbjct: 358 VDADKLELMADRAESLLLSLKQRFPGLPQTALDMSKIQYNKDIGKSILESYSRVLESLAF 417
Query: 239 NIVARIDDLLYVDDLTKH-SDRFPLVPPTVNVVSQQKLSRSMAVSVSGTPHKALSP 293
NIVARIDDLL+VDDLT+H SD+ PT + +S+AV VS + SP
Sbjct: 418 NIVARIDDLLFVDDLTRHSSDQI----PTTLGNNGNDAPKSIAVPVSNYTTPSYSP 469
>AT3G55660.1 | Symbols: ATROPGEF6, ROPGEF6 | ROP (rho of plants)
guanine nucleotide exchange factor 6 |
chr3:20649051-20651290 REVERSE LENGTH=579
Length = 579
Score = 305 bits (782), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 181/371 (48%), Positives = 233/371 (62%), Gaps = 45/371 (12%)
Query: 1 MLLDILDSYKAKEFWYVDQGIVSQDADGSASFRKRIQREEEKWWLPVPQVPPAGLSDNSR 60
ML++ILDS+ EFWYVDQGIV+ ++ S SFR+ + +KWWLP+P+VP GL++ +R
Sbjct: 220 MLIEILDSFGETEFWYVDQGIVAAESARSNSFRE----DGDKWWLPLPRVPSDGLTEQTR 275
Query: 61 KQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYITSEQFX 120
K+L+HTRE +QILKA MSIN ALAEMEVP+SYLEALPKNGR+CLGDF+YR ITS+ F
Sbjct: 276 KKLDHTREFTNQILKACMSINSIALAEMEVPQSYLEALPKNGRSCLGDFLYRNITSDNFS 335
Query: 121 XXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXWEIVKDFM-- 178
+E+ANRVEAS++VW IVK+ M
Sbjct: 336 ADHLLESIDLSSELAVVEMANRVEASMYVWRRRAHSRHLISLYRSTSTRWGMIVKEMMMH 395
Query: 179 -ADGDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYSRVLESMA 237
DGDKRE+ AERAE++L+ LKQRFPGL QT LDTSKIQ NKDVGK+ILE YSRVLES+A
Sbjct: 396 QTDGDKREIFAERAESLLIRLKQRFPGLRQTALDTSKIQYNKDVGKSILESYSRVLESLA 455
Query: 238 FNIVARIDDLLYVDD-------------------LTKH-------SDRFPLVPPTVNVVS 271
++I RI+++L++DD L+K S R L P++ VS
Sbjct: 456 YSIGVRIEEVLFMDDISKDDGDGDDDSCSDKLRLLSKEAASGGSGSLREKLSAPSLFSVS 515
Query: 272 QQKLS---RSMAVSVSGTPHKALSPVPLISPARGDR--ERTPFLNINNNNIIKPQRRGFG 326
S R+++ S S TP + SP+PLISP G R ER PFL+ N +R GFG
Sbjct: 516 FSGTSTPYRTLSFSAS-TP--SYSPMPLISPINGGRGGERAPFLSGRNIR----ERCGFG 568
Query: 327 VRRALSNYLGG 337
++AL+NYL G
Sbjct: 569 PKKALANYLRG 579
>AT4G38430.1 | Symbols: ATROPGEF1, ROPGEF1 | rho guanyl-nucleotide
exchange factor 1 | chr4:17986643-17988659 FORWARD
LENGTH=548
Length = 548
Score = 274 bits (700), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 195/317 (61%), Gaps = 5/317 (1%)
Query: 1 MLLDILDSYKAKEFWYVDQGIVSQDADGSASFRKRIQREEEKWWLPVPQVPPAGLSDNSR 60
ML+D+LD++ EFWY D+GIV D D + R+E+KWWLP P+VPP GLS+ +R
Sbjct: 203 MLIDMLDAFSDTEFWYTDRGIVLGDCDKDSYNSPASVRQEDKWWLPCPKVPPNGLSEEAR 262
Query: 61 KQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYITSEQFX 120
K+L R+ A+QILKAA++IN LAEME+P+ YLE LPK+G+ CLG+ IY+Y+T+ +F
Sbjct: 263 KKLQQCRDFANQILKAALAINSGVLAEMEIPDPYLETLPKSGKECLGEIIYQYLTANKFS 322
Query: 121 XXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMAD 180
H LEIANR+EA++HVW + VK + D
Sbjct: 323 PECLLDCLDLSSEHQTLEIANRIEAAVHVWRQKNGRRHKKQAKLKLSSWGGK-VKGLVND 381
Query: 181 GDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYSRVLESMAFNI 240
++ + L +RAE +L SL+ RFPGL QTTLD +KIQ NKDVG++ILE YSRV+ESMAFNI
Sbjct: 382 NERNDFLVQRAETLLQSLRIRFPGLPQTTLDMNKIQYNKDVGQSILESYSRVMESMAFNI 441
Query: 241 VARIDDLLYVDDLTKHSDRFPLVPPTVNVVSQQKLSRSMAVSVSGTPHKALSPVPLISPA 300
ARIDD+LYVDD + S V ++++ S L+ A SV +PH + P +S A
Sbjct: 442 TARIDDVLYVDDAMRRSIS---VTESLSLFSINGLNPQKAFSVQSSPHGSPFATPALSVA 498
Query: 301 -RGDRERTPFLNINNNN 316
R R P ++ N
Sbjct: 499 SRSPRRAPPLYSVKRNG 515
>AT1G01700.1 | Symbols: ATROPGEF2, ROPGEF2 | RHO guanyl-nucleotide
exchange factor 2 | chr1:259495-261474 REVERSE
LENGTH=485
Length = 485
Score = 249 bits (635), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 130/258 (50%), Positives = 170/258 (65%), Gaps = 15/258 (5%)
Query: 1 MLLDILDSYKAKEFWYVDQGIVSQDADGSA--SFRKRI-QREEEKWWLPVPQVPPAGLSD 57
ML++ LDS++ EFWY ++G +S + SA SFRK I QR+EEKWWLP+P VP GLS+
Sbjct: 229 MLMEALDSFQKTEFWYAEEGSLSMKSTRSATGSFRKVIVQRKEEKWWLPIPLVPLQGLSE 288
Query: 58 NSRKQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYITSE 117
+RKQL RE +QI KAAM+IN + L EM++P+SY+ LPK+G+ GD IYR++TS
Sbjct: 289 KARKQLKSKRESTNQIHKAAMAINSSILGEMDIPDSYMATLPKSGKASTGDAIYRHMTSS 348
Query: 118 -QFXXXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXWEIVKD 176
+F H AL++A+RVEAS++ W W +VKD
Sbjct: 349 GRFSPEKLLDRLKIVSEHEALQLADRVEASMYTW--------RRKACLNNSKSSWNMVKD 400
Query: 177 FMA---DGDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYSRVL 233
M+ DK +LAERAE++L LKQR+P L+QT+LD KI CNKDVGKA+LE YSRVL
Sbjct: 401 LMSITERSDKNYVLAERAESLLFCLKQRYPELSQTSLDICKIHCNKDVGKAVLESYSRVL 460
Query: 234 ESMAFNIVARIDDLLYVD 251
E +AFNIVA IDD+LYVD
Sbjct: 461 EGLAFNIVAWIDDVLYVD 478
>AT4G00460.2 | Symbols: ATROPGEF3, ROPGEF3 | RHO guanyl-nucleotide
exchange factor 3 | chr4:211146-213094 REVERSE
LENGTH=473
Length = 473
Score = 248 bits (634), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 130/265 (49%), Positives = 174/265 (65%), Gaps = 15/265 (5%)
Query: 1 MLLDILDSYKAKEFWYVDQGIVSQDA--DGSASFRKRI-QREEEKWWLPVPQVPPAGLSD 57
ML++ LDS++ EFWY ++G +S + + SFRK I QR+EEKWWLPVP VP GLSD
Sbjct: 217 MLMEALDSFQNTEFWYAEEGSLSMKSARSSTGSFRKVIVQRKEEKWWLPVPLVPSEGLSD 276
Query: 58 NSRKQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYIT-S 116
+RKQL + RE +QI KAAM+IN + L+EME+P+SY+ LPK G++ +GD IYRY++ S
Sbjct: 277 KARKQLKNKRESTNQIHKAAMAINSSILSEMEIPDSYMTTLPKCGKSSVGDSIYRYMSGS 336
Query: 117 EQFXXXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXWEIVKD 176
+F H A+++A+RVEAS++ W W +VKD
Sbjct: 337 GRFFPEQLLDCLNISSEHEAVQLADRVEASMYTW--------RRKSCLSNSKNSWNMVKD 388
Query: 177 FMAD---GDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYSRVL 233
M+ DK ++AERAE +L LKQR+P L+QT+LD KIQ NKDVGKA+LE YSRVL
Sbjct: 389 LMSTTERTDKNYVMAERAETLLFCLKQRYPELSQTSLDICKIQYNKDVGKAVLESYSRVL 448
Query: 234 ESMAFNIVARIDDLLYVDDLTKHSD 258
E +AFNIVA IDD+LYVD + S+
Sbjct: 449 EGLAFNIVAWIDDVLYVDKTMRGSE 473
>AT2G45890.1 | Symbols: ATROPGEF4, ROPGEF4, RHS11 | RHO
guanyl-nucleotide exchange factor 4 |
chr2:18883540-18885440 FORWARD LENGTH=463
Length = 463
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 123/268 (45%), Positives = 172/268 (64%), Gaps = 17/268 (6%)
Query: 1 MLLDILDSYKAKEFWYVDQGIVSQDAD----GSASFRKRI-QREEEKWWLPVPQVPPAGL 55
ML++ILDS+ EFWYV++G S ++ S +FRK + QR++EKWWLPVP VP GL
Sbjct: 202 MLMEILDSFTENEFWYVERGSSSMNSGGGGRDSGTFRKVVVQRKDEKWWLPVPCVPAEGL 261
Query: 56 SDNSRKQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYI- 114
S+ RK L H R+CASQI KAA++IN + L +M++P+SYL LPK+G+ +GD IY+ +
Sbjct: 262 SEEERKHLRHKRDCASQIHKAALAINDSTLNDMDIPDSYLTTLPKSGKASVGDVIYKQLC 321
Query: 115 TSEQFXXXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXWEIV 174
T+E+F H ALE+A++VEAS+ W W+++
Sbjct: 322 TAEKFYPDQLLDILKITSEHEALELADKVEASLVTW-------RRKTGGLTHSKSSWDMM 374
Query: 175 KDFMADG----DKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYS 230
KD D DK +LA RA ++L LKQR+P L+QT+LD KIQ N+DVGKA+LE YS
Sbjct: 375 KDISGDADRGNDKNHILAARARSLLFCLKQRYPELSQTSLDICKIQFNRDVGKAVLESYS 434
Query: 231 RVLESMAFNIVARIDDLLYVDDLTKHSD 258
RVLE +A+N+V+ IDD+LYVD ++ D
Sbjct: 435 RVLEGLAYNVVSWIDDVLYVDRTVRNRD 462
>AT1G52240.1 | Symbols: ATROPGEF11, ROPGEF11, PIRF1 | RHO
guanyl-nucleotide exchange factor 11 |
chr1:19455766-19459235 REVERSE LENGTH=607
Length = 607
Score = 223 bits (569), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/277 (45%), Positives = 162/277 (58%), Gaps = 31/277 (11%)
Query: 1 MLLDILDSYKAK-EFWYVDQGIVSQDADGSASFRKRIQREEEKWWLPVPQVPPAGLSDNS 59
MLLD LD +K + EF+YV +D+ S R +EKWWLP +VPP GLS+ S
Sbjct: 281 MLLDCLDKFKDQDEFYYV-----KKDSPDSCE-----TRNDEKWWLPAVKVPPNGLSEIS 330
Query: 60 RKQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYITSEQF 119
R+ L +EC +Q+LKAAM+IN L+EME+PESYLE+LPKNGR LGD IYR IT E F
Sbjct: 331 RRFLQSQKECVNQVLKAAMAINAQVLSEMEIPESYLESLPKNGRASLGDVIYRMITVEMF 390
Query: 120 XXXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMA 179
H L++ NR+EASI +W W
Sbjct: 391 DADQFLIEMDLSSEHKILDLKNRIEASIVIW--------KRKMVQKDTKSPWGSTVSI-- 440
Query: 180 DGDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYSRVLESMAFN 239
+KRE ERAE ILL LKQ FPG++Q++LD SKIQ N+DVG AILE YSRVLES+A
Sbjct: 441 --EKREQFEERAETILLLLKQGFPGISQSSLDISKIQFNRDVGLAILESYSRVLESLAHT 498
Query: 240 IVARIDDLLYVDDLTKHSDRFPLVPPTVNVVSQQKLS 276
+++RI+D+LY D LT+ PT N S+ + S
Sbjct: 499 VMSRIEDVLYADQLTQE--------PTNNAPSKNRYS 527
>AT3G24620.1 | Symbols: ATROPGEF8, ROPGEF8 | RHO guanyl-nucleotide
exchange factor 8 | chr3:8980695-8982793 REVERSE
LENGTH=523
Length = 523
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 112/254 (44%), Positives = 153/254 (60%), Gaps = 20/254 (7%)
Query: 1 MLLDILDSYKA-KEFWYVDQGIVSQDADGSASFRKRIQREEEKWWLPVPQVPPAGLSDNS 59
ML+D LD+++ EFWYV + D + R R +KWWLP +VPP GLS+ S
Sbjct: 198 MLIDTLDNFRGHNEFWYVSR-------DSEEGQQARNDRTNDKWWLPPVKVPPGGLSEPS 250
Query: 60 RKQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYITSEQF 119
R+ L ++ +Q+ KAAM+IN L+EME+PESY+++LPKNGR LGD IY+ IT E F
Sbjct: 251 RRMLYFQKDSVTQVQKAAMAINAQVLSEMEIPESYIDSLPKNGRASLGDSIYKSITEEWF 310
Query: 120 XXXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMA 179
H L++ NR+EAS+ +W W
Sbjct: 311 DPEQFLAMLDMSTEHKVLDLKNRIEASVVIW--------KRKLHTKDTKSSWGSAVSL-- 360
Query: 180 DGDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYSRVLESMAFN 239
+KREL ERAE IL+ LKQ+FPGL Q++LD SKIQ NKDVG+A+LE YSR+LES+A+
Sbjct: 361 --EKRELFEERAETILVLLKQKFPGLPQSSLDISKIQFNKDVGQAVLESYSRILESLAYT 418
Query: 240 IVARIDDLLYVDDL 253
+++RI+D+LY D L
Sbjct: 419 VMSRIEDVLYTDTL 432
>AT4G13240.1 | Symbols: ATROPGEF9, ROPGEF9 | RHO guanyl-nucleotide
exchange factor 9 | chr4:7680153-7682414 FORWARD
LENGTH=517
Length = 517
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/256 (43%), Positives = 154/256 (60%), Gaps = 20/256 (7%)
Query: 1 MLLDILDSYKA-KEFWYVDQGIVSQDADGSASFRKRIQREEEKWWLPVPQVPPAGLSDNS 59
ML+D LD+++ EFWYV + D + R +R ++KWWLP +VPP GLS+++
Sbjct: 187 MLIDTLDNFRGHNEFWYVSR-------DSEEGKQARNERTKDKWWLPPVKVPPNGLSESA 239
Query: 60 RKQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYITSEQF 119
R+ L+ ++ SQ+ KAAM+IN L+EM +P+SY+E+LPKNGR LGD +Y+ IT E F
Sbjct: 240 RRMLHFQKDSVSQVQKAAMAINAQVLSEMAIPDSYIESLPKNGRVSLGDSLYKSITEEWF 299
Query: 120 XXXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMA 179
H L++ NR+EASI +W W
Sbjct: 300 DPEQFLSTLDLSTEHKVLDVKNRIEASIVIW--------KRKLHLKDNKSSWGSAVSL-- 349
Query: 180 DGDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYSRVLESMAFN 239
+KREL ERAE IL+ LKQ+FPGL Q++LD SKIQ NKDVG A+LE YSR+LES+ +
Sbjct: 350 --EKRELFEERAETILVLLKQKFPGLPQSSLDISKIQYNKDVGHAVLESYSRILESLGYT 407
Query: 240 IVARIDDLLYVDDLTK 255
++RIDD+LY D L +
Sbjct: 408 EMSRIDDVLYADSLAR 423
>AT1G79860.1 | Symbols: ATROPGEF12, ROPGEF12, MEE64 | RHO
guanyl-nucleotide exchange factor 12 |
chr1:30042172-30044092 REVERSE LENGTH=515
Length = 515
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/252 (43%), Positives = 156/252 (61%), Gaps = 21/252 (8%)
Query: 1 MLLDILDSYKAK-EFWYVDQGIVSQDADGSASFRKRIQREEEKWWLPVPQVPPAGLSDNS 59
ML+D L+++K + EF Y+ + S D DG +R +EKWW+P +VPP GLS+ S
Sbjct: 205 MLIDCLENFKDQSEFSYISKD--SPDLDG--------KRNDEKWWIPTVKVPPDGLSEAS 254
Query: 60 RKQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYITSEQF 119
R+ L + ++C +Q+LKAAM+IN L EME+PESY+++LPKNGR LGD +Y+ IT + F
Sbjct: 255 RRFLQYQKDCVNQVLKAAMAINAQVLFEMEIPESYIDSLPKNGRASLGDQMYKNITVDFF 314
Query: 120 XXXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMA 179
H +++ NR+EASI +W E
Sbjct: 315 DPDQFLSSMDMSSEHKIVDLKNRIEASIIIWKRKMVYKDNKSSAPWASGVSLE------- 367
Query: 180 DGDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYSRVLESMAFN 239
KRE+ ERAE ILL LKQR+PG++Q++LD SKIQ N+DVG+A+LE YSR+LES+A+
Sbjct: 368 ---KREVFEERAETILLILKQRYPGISQSSLDISKIQFNEDVGQAVLESYSRILESLAYT 424
Query: 240 IVARIDDLLYVD 251
+++RIDD+L D
Sbjct: 425 VLSRIDDVLEAD 436
>AT5G19560.1 | Symbols: ATROPGEF10, ROPGEF10 | ROP uanine nucleotide
exchange factor 10 | chr5:6603291-6606130 FORWARD
LENGTH=493
Length = 493
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 159/256 (62%), Gaps = 18/256 (7%)
Query: 1 MLLDILDSYK-AKEFWYVDQGIVSQDADGSASFRKRIQREEEKWWLPVPQVPPAGLSDNS 59
+LL+ LD++K K+FWYV + + +DAD + +R+ +E WWLPV +VP GLS+ S
Sbjct: 157 VLLETLDNFKDQKDFWYVPRDM--EDADHNGDWRR-----DENWWLPVVKVPTDGLSEES 209
Query: 60 RKQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYITSEQF 119
R+ L + ++ +Q+LKAA +IN + L+EM VPE+Y+++LPKNG+T LGDF+Y+ IT E F
Sbjct: 210 RRWLQNQKDSVAQVLKAATAINAHVLSEMHVPENYIDSLPKNGKTSLGDFLYKSITEESF 269
Query: 120 XXXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMA 179
H L++ NR+EAS+ +W E
Sbjct: 270 DPDYFVSFLDLSTEHKVLDLKNRIEASMVIWKRKMCQKEKDGKSQWGSTVSLE------- 322
Query: 180 DGDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYSRVLESMAFN 239
KREL RAE IL+ LKQ+FPG+ Q++L+ SKI+ NKDVG+AILE YSRVLES+A
Sbjct: 323 ---KRELFEVRAETILVMLKQQFPGIPQSSLEVSKIKNNKDVGQAILESYSRVLESLASK 379
Query: 240 IVARIDDLLYVDDLTK 255
I++RI+D+L D L +
Sbjct: 380 IMSRIEDVLEADRLVQ 395
>AT3G16130.1 | Symbols: ATROPGEF13, ROPGEF13, PIRF2 | RHO
guanyl-nucleotide exchange factor 13 |
chr3:5466246-5468512 FORWARD LENGTH=576
Length = 576
Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 110/257 (42%), Positives = 152/257 (59%), Gaps = 18/257 (7%)
Query: 1 MLLDILDSYKAK-EFWYVDQGIVSQDADGSASFRKRIQREEEKWWLPVPQVPPAGLSDNS 59
MLLD LD +K + EF+YV G S +++ S S R ++KWWLP+ +VPP GLS+
Sbjct: 241 MLLDCLDKFKDQDEFYYVTPG--SPESENSNS-----TRNDDKWWLPIVKVPPKGLSETL 293
Query: 60 RKQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYITSEQF 119
++ L REC Q+L +AM+IN L EME+PESY+++LPK GR LGD IYR IT E F
Sbjct: 294 KRFLLSQRECVCQVLNSAMAINSQVLTEMEIPESYIDSLPKKGRASLGDMIYRMITLEMF 353
Query: 120 XXXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMA 179
H L++ N+ EAS+ +W W
Sbjct: 354 DAEQFLLEMDLSSEHKILDLKNKFEASVVIW------QRKIVQIDNKSSSPWSTNLSM-- 405
Query: 180 DGDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYSRVLESMAFN 239
DKR+ L ERA IL +KQ FPG++Q+TLD SKIQ N+D+G AI+E YSR+LES+A
Sbjct: 406 --DKRQQLEERAATILQLIKQEFPGISQSTLDISKIQFNRDIGLAIVESYSRILESLAHT 463
Query: 240 IVARIDDLLYVDDLTKH 256
+++RI+D+L D LT++
Sbjct: 464 VMSRIEDVLEADQLTQN 480
>AT1G31650.1 | Symbols: ATROPGEF14, ROPGEF14 | RHO guanyl-nucleotide
exchange factor 14 | chr1:11326474-11329767 REVERSE
LENGTH=576
Length = 576
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 133/254 (52%), Gaps = 9/254 (3%)
Query: 1 MLLDILDSYKAKEFWYVDQGIVSQDADGSASFRKRIQREEEKWWLPVPQVPPAGLSDNSR 60
ML++ LDS EFWY + G ++ + S S E ++WWLP PQVP GLS++ R
Sbjct: 249 MLIETLDSMVNTEFWYSEIGSRAEGKNKSTS-------ESKRWWLPSPQVPKPGLSNSGR 301
Query: 61 KQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYITSEQFX 120
K+L + Q+ KA +IN N L EM VP EA+PK+G+ LGD +Y+ + E
Sbjct: 302 KKLLDKGKVVYQVFKATKAINENILLEMPVPIVIKEAIPKSGKNSLGDELYKMLAVESAT 361
Query: 121 XXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMAD 180
H ALE N++E+++ W W KD +++
Sbjct: 362 VDEIFISLNLGTEHAALETVNKLESAMFAW--KERITEQGSNGKSPVRASWSFAKDPLSE 419
Query: 181 GDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYSRVLESMAFNI 240
+ E L RAE + +K + P L + LD +KIQ +KD+G A+LE YSR L ++AF I
Sbjct: 420 IGRNESLLNRAEALRTQIKSKHPNLPHSFLDATKIQYDKDIGHAVLEAYSRTLANLAFRI 479
Query: 241 VARIDDLLYVDDLT 254
++R+ ++L D L+
Sbjct: 480 LSRMGEILKEDSLS 493
>AT4G00460.1 | Symbols: ATROPGEF3, ROPGEF3 | RHO guanyl-nucleotide
exchange factor 3 | chr4:211731-213094 REVERSE
LENGTH=337
Length = 337
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 81/117 (69%), Gaps = 5/117 (4%)
Query: 1 MLLDILDSYKAKEFWYVDQGIVSQDA--DGSASFRKRI-QREEEKWWLPVPQVPPAGLSD 57
ML++ LDS++ EFWY ++G +S + + SFRK I QR+EEKWWLPVP VP GLSD
Sbjct: 217 MLMEALDSFQNTEFWYAEEGSLSMKSARSSTGSFRKVIVQRKEEKWWLPVPLVPSEGLSD 276
Query: 58 NSRKQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYI 114
+RKQL + RE +QI KAAM+IN + L+EME+P+SY+ LPK FI+ Y+
Sbjct: 277 KARKQLKNKRESTNQIHKAAMAINSSILSEMEIPDSYMTTLPK--VFFFVTFIHSYL 331