Miyakogusa Predicted Gene

Lj0g3v0348699.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0348699.1 Non Chatacterized Hit- tr|I1MYK3|I1MYK3_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,81.25,0,RING/U-box,NULL; ZF_RING_2,Zinc finger, RING-type; ZINC
FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTE,CUFF.23943.1
         (239 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G24440.1 | Symbols:  | RING/U-box superfamily protein | chr1:...   299   1e-81
AT1G13195.1 | Symbols:  | RING/U-box superfamily protein | chr1:...   269   1e-72
AT1G13195.2 | Symbols:  | RING/U-box superfamily protein | chr1:...   233   7e-62
AT5G01520.1 | Symbols:  | RING/U-box superfamily protein | chr5:...   207   7e-54
AT3G47160.1 | Symbols:  | RING/U-box superfamily protein | chr3:...   202   1e-52
AT3G47160.2 | Symbols:  | RING/U-box superfamily protein | chr3:...   194   6e-50
AT5G58787.1 | Symbols:  | RING/U-box superfamily protein | chr5:...   187   5e-48
AT5G58787.2 | Symbols:  | RING/U-box superfamily protein | chr5:...   169   2e-42
AT5G01520.2 | Symbols:  | RING/U-box superfamily protein | chr5:...   150   6e-37

>AT1G24440.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:8662340-8663777 FORWARD LENGTH=251
          Length = 251

 Score =  299 bits (766), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 150/241 (62%), Positives = 180/241 (74%), Gaps = 12/241 (4%)

Query: 4   MAYQLSRLPYQDSLKLLEADIQHANALAAAIPTTKGGSLLQMKLVCNQLAPLFLLFLQWI 63
           M YQL++  Y+DSLK+LEADI+HAN LAA IP  K G  LQMKLVC+ LAP F+  LQW+
Sbjct: 1   MYYQLTKSSYRDSLKILEADIEHANGLAAEIPMGKSGVRLQMKLVCSNLAPFFIFLLQWM 60

Query: 64  DCSCSGFLHRYLDLFHIVIYKVNSDGRSIMSTHRRKATIGDFYAVILPSLQRLLGSFDKS 123
           D SC   L RY D FHI+IYKV +DGR   S + RKATI +FY VILPSL+RL  +F  +
Sbjct: 61  DFSC--LLPRYFDFFHILIYKVRADGRWNRSRYGRKATIREFYGVILPSLERLHINF--A 116

Query: 124 ELSDQ-----GPSSIEGSRYGKKVIEGDEKLTNVDLQREDECGICLEPCTKIVLPYCCHA 178
           +L D+      P +I   +Y    IEG   + ++DL+REDECGICLEPCTK+VLP CCHA
Sbjct: 117 DLPDESLWYPNPKAITKKQYD---IEGSRYMNSIDLEREDECGICLEPCTKMVLPNCCHA 173

Query: 179 MCIKCYCKWNRKSESCPFCRSSLRRVKSEDLWVLTCNEDVVDAETVSREDLLHFYLYINK 238
           MCIKCY  WN KSESCPFCR S++RV SEDLWVLTC+EDVVD ETV++EDLL FYL+IN 
Sbjct: 174 MCIKCYRNWNTKSESCPFCRGSIKRVNSEDLWVLTCDEDVVDPETVTKEDLLRFYLHINS 233

Query: 239 L 239
           L
Sbjct: 234 L 234


>AT1G13195.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:4501778-4503347 REVERSE LENGTH=260
          Length = 260

 Score =  269 bits (688), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 132/229 (57%), Positives = 163/229 (71%), Gaps = 5/229 (2%)

Query: 13  YQDSLKLLEADIQHANALAAAIPTTKGGSLLQMKLVCNQLAPLFLLFLQWIDCSCSGFLH 72
           Y +SLK+LEAD+QHAN+LA AIP  K    LQMKLV +  A L L  L+WID S S  + 
Sbjct: 16  YYESLKVLEADVQHANSLAEAIPMGKNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLIP 75

Query: 73  RYLDLFHIVIYKVNSDGRSIMSTHRRKATIGDFYAVILPSLQRLLGSFDKSELSDQGPSS 132
           RYL+LFH+++YKV SDG+  ++TH RKATI +FY VILPSLQ L  + D+ E +D G   
Sbjct: 76  RYLNLFHVLVYKVQSDGQPKLTTHGRKATISEFYGVILPSLQLLHSNLDELETTDIG--- 132

Query: 133 IEGSRYGKKVIEG--DEKLTNVDLQREDECGICLEPCTKIVLPYCCHAMCIKCYCKWNRK 190
            +  R  KK+ +     + +N  L+RE+ECGICLE CTK+VLP CCH+MCIKCY  WN K
Sbjct: 133 FDLKRLSKKITKEARSSRFSNAGLEREEECGICLETCTKMVLPNCCHSMCIKCYRNWNLK 192

Query: 191 SESCPFCRSSLRRVKSEDLWVLTCNEDVVDAETVSREDLLHFYLYINKL 239
           S+SCPFCR S++RV SEDLWVL  + DVVD  T SREDL  FYLYIN L
Sbjct: 193 SQSCPFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSL 241


>AT1G13195.2 | Symbols:  | RING/U-box superfamily protein |
           chr1:4501778-4502855 REVERSE LENGTH=222
          Length = 222

 Score =  233 bits (595), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 115/204 (56%), Positives = 142/204 (69%), Gaps = 5/204 (2%)

Query: 38  KGGSLLQMKLVCNQLAPLFLLFLQWIDCSCSGFLHRYLDLFHIVIYKVNSDGRSIMSTHR 97
           K    LQMKLV +  A L L  L+WID S S  + RYL+LFH+++YKV SDG+  ++TH 
Sbjct: 3   KNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLIPRYLNLFHVLVYKVQSDGQPKLTTHG 62

Query: 98  RKATIGDFYAVILPSLQRLLGSFDKSELSDQGPSSIEGSRYGKKVIEG--DEKLTNVDLQ 155
           RKATI +FY VILPSLQ L  + D+ E +D G    +  R  KK+ +     + +N  L+
Sbjct: 63  RKATISEFYGVILPSLQLLHSNLDELETTDIG---FDLKRLSKKITKEARSSRFSNAGLE 119

Query: 156 REDECGICLEPCTKIVLPYCCHAMCIKCYCKWNRKSESCPFCRSSLRRVKSEDLWVLTCN 215
           RE+ECGICLE CTK+VLP CCH+MCIKCY  WN KS+SCPFCR S++RV SEDLWVL  +
Sbjct: 120 REEECGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQSCPFCRGSMKRVNSEDLWVLAGD 179

Query: 216 EDVVDAETVSREDLLHFYLYINKL 239
            DVVD  T SREDL  FYLYIN L
Sbjct: 180 NDVVDTRTASREDLFRFYLYINSL 203


>AT5G01520.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:206797-208399 FORWARD LENGTH=242
          Length = 242

 Score =  207 bits (526), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 105/230 (45%), Positives = 143/230 (62%), Gaps = 6/230 (2%)

Query: 10  RLPYQDSLKLLEADIQHANALAAAIPTTKGGSLLQMKLVCNQLAPLFLLFLQWIDCSCSG 69
           R  ++DSLK LEADIQ AN LA+  P    G  +QM+L  +  A LFL  LQW DC  +G
Sbjct: 2   RKSFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFAG 61

Query: 70  FLHRYLDLFHIVIYKVNSDGRSIMSTHRRKATIGDFYAVILPSLQRLLGSFDKSELSDQG 129
            L     L  I+IYK   DG++ MS H RK +I +FY V+ PSL +L G    +++ ++ 
Sbjct: 62  AL----GLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGI--TDVEERK 115

Query: 130 PSSIEGSRYGKKVIEGDEKLTNVDLQREDECGICLEPCTKIVLPYCCHAMCIKCYCKWNR 189
              I   RY KK      K++ +DL+RE+ECGICLE   K+VLP C H+MCI CY  W  
Sbjct: 116 QKEICDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRA 175

Query: 190 KSESCPFCRSSLRRVKSEDLWVLTCNEDVVDAETVSREDLLHFYLYINKL 239
           +S+SCPFCR SL+RV S DLW+ TC+ ++ D   + +E+L    +YI+KL
Sbjct: 176 RSQSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKL 225


>AT3G47160.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:17360238-17361879 REVERSE LENGTH=245
          Length = 245

 Score =  202 bits (515), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 101/232 (43%), Positives = 143/232 (61%), Gaps = 6/232 (2%)

Query: 8   LSRLPYQDSLKLLEADIQHANALAAAIPTTKGGSLLQMKLVCNQLAPLFLLFLQWIDCSC 67
           ++++ ++DSLK LEADIQHAN +A   P  K G+ +QM+L     A   L  +QW DC  
Sbjct: 1   MAKVSFKDSLKALEADIQHANTVALDYPREKDGARVQMRLSYTPAAQFLLFLVQWTDCHL 60

Query: 68  SGFLHRYLDLFHIVIYKVNSDGRSIMSTHRRKATIGDFYAVILPSLQRLLGSFDKSELSD 127
           +G     L L  ++IY   +DG++ MS + RK +I DFYAVI PSL +L      ++L D
Sbjct: 61  AG----TLGLLRVLIYMTYADGKTTMSVYERKTSIKDFYAVIFPSLLQLERGI--TDLDD 114

Query: 128 QGPSSIEGSRYGKKVIEGDEKLTNVDLQREDECGICLEPCTKIVLPYCCHAMCIKCYCKW 187
           +    +   RY  K      KL+ +D++RE+ECGIC+E    +VLP C H++CIKCY  W
Sbjct: 115 RKQKEVCKIRYRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCIKCYRDW 174

Query: 188 NRKSESCPFCRSSLRRVKSEDLWVLTCNEDVVDAETVSREDLLHFYLYINKL 239
           + +SESCPFCR SL+RV S DLW+L    D V+  T+ RE+    ++YI KL
Sbjct: 175 HGRSESCPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKL 226


>AT3G47160.2 | Symbols:  | RING/U-box superfamily protein |
           chr3:17360238-17361879 REVERSE LENGTH=257
          Length = 257

 Score =  194 bits (492), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 101/244 (41%), Positives = 143/244 (58%), Gaps = 18/244 (7%)

Query: 8   LSRLPYQDSLKLLEADIQHANAL------------AAAIPTTKGGSLLQMKLVCNQLAPL 55
           ++++ ++DSLK LEADIQHAN +            A   P  K G+ +QM+L     A  
Sbjct: 1   MAKVSFKDSLKALEADIQHANTVLSNELGDEVIFRALDYPREKDGARVQMRLSYTPAAQF 60

Query: 56  FLLFLQWIDCSCSGFLHRYLDLFHIVIYKVNSDGRSIMSTHRRKATIGDFYAVILPSLQR 115
            L  +QW DC  +G     L L  ++IY   +DG++ MS + RK +I DFYAVI PSL +
Sbjct: 61  LLFLVQWTDCHLAG----TLGLLRVLIYMTYADGKTTMSVYERKTSIKDFYAVIFPSLLQ 116

Query: 116 LLGSFDKSELSDQGPSSIEGSRYGKKVIEGDEKLTNVDLQREDECGICLEPCTKIVLPYC 175
           L      ++L D+    +   RY  K      KL+ +D++RE+ECGIC+E    +VLP C
Sbjct: 117 LERGI--TDLDDRKQKEVCKIRYRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNC 174

Query: 176 CHAMCIKCYCKWNRKSESCPFCRSSLRRVKSEDLWVLTCNEDVVDAETVSREDLLHFYLY 235
            H++CIKCY  W+ +SESCPFCR SL+RV S DLW+L    D V+  T+ RE+    ++Y
Sbjct: 175 THSLCIKCYRDWHGRSESCPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVY 234

Query: 236 INKL 239
           I KL
Sbjct: 235 IEKL 238


>AT5G58787.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:23742733-23744324 FORWARD LENGTH=242
          Length = 242

 Score =  187 bits (475), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 100/232 (43%), Positives = 148/232 (63%), Gaps = 9/232 (3%)

Query: 8   LSRLPYQDSLKLLEADIQHANALAAAIPTTKGGSLLQMKLVCNQLAPLFLLFLQWIDCSC 67
           +++L ++DSLK LEADIQHAN LA   P  K G+ +QM+L  +  A  FL  +QW DC  
Sbjct: 1   MAKLSFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKL 60

Query: 68  SGFLHRYLDLFHIVIYKVNSDGRSIMSTHRRKATIGDFYAVILPSLQRLLGSFDKSELSD 127
           +GFL     L  ++IY   +DG++ MS + RKA+I +F AVILPSL +L      +++ D
Sbjct: 61  AGFLG----LLRVLIYMTYADGKTTMSVYERKASIREFQAVILPSLSQLQRGV--TDIDD 114

Query: 128 QGPSSIEGSRYGKKVIEGDEKLTNVDLQREDECGICLEPCTKIVLPYCCHAMCIKCYCKW 187
                +   RY KK    + +++ ++++RE+ECGIC+E  +K+VLP C H++CIKCY  W
Sbjct: 115 SKQKEVCKMRYRKK---DESEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDW 171

Query: 188 NRKSESCPFCRSSLRRVKSEDLWVLTCNEDVVDAETVSREDLLHFYLYINKL 239
             +S+SCPFCR SL+RV S DLW+     D V+   ++RE+    ++YI KL
Sbjct: 172 RGRSQSCPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKL 223


>AT5G58787.2 | Symbols:  | RING/U-box superfamily protein |
           chr5:23742733-23744324 FORWARD LENGTH=227
          Length = 227

 Score =  169 bits (427), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 92/232 (39%), Positives = 138/232 (59%), Gaps = 24/232 (10%)

Query: 8   LSRLPYQDSLKLLEADIQHANALAAAIPTTKGGSLLQMKLVCNQLAPLFLLFLQWIDCSC 67
           +++L ++DSLK LEADIQHAN LA   P  K G+ +QM+L  +  A  FL  +QW DC  
Sbjct: 1   MAKLSFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKL 60

Query: 68  SGFLHRYLDLFHIVIYKVNSDGRSIMSTHRRKATIGDFYAVILPSLQRLLGSFDKSELSD 127
           +GFL     L  ++IY   +DG++ MS + RKA+I +F                  ++ D
Sbjct: 61  AGFLG----LLRVLIYMTYADGKTTMSVYERKASIREF-----------------QDIDD 99

Query: 128 QGPSSIEGSRYGKKVIEGDEKLTNVDLQREDECGICLEPCTKIVLPYCCHAMCIKCYCKW 187
                +   RY KK    + +++ ++++RE+ECGIC+E  +K+VLP C H++CIKCY  W
Sbjct: 100 SKQKEVCKMRYRKK---DESEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDW 156

Query: 188 NRKSESCPFCRSSLRRVKSEDLWVLTCNEDVVDAETVSREDLLHFYLYINKL 239
             +S+SCPFCR SL+RV S DLW+     D V+   ++RE+    ++YI KL
Sbjct: 157 RGRSQSCPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKL 208


>AT5G01520.2 | Symbols:  | RING/U-box superfamily protein |
           chr5:206797-208170 FORWARD LENGTH=172
          Length = 172

 Score =  150 bits (380), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 106/175 (60%), Gaps = 6/175 (3%)

Query: 10  RLPYQDSLKLLEADIQHANALAAAIPTTKGGSLLQMKLVCNQLAPLFLLFLQWIDCSCSG 69
           R  ++DSLK LEADIQ AN LA+  P    G  +QM+L  +  A LFL  LQW DC  +G
Sbjct: 2   RKSFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFAG 61

Query: 70  FLHRYLDLFHIVIYKVNSDGRSIMSTHRRKATIGDFYAVILPSLQRLLGSFDKSELSDQG 129
                L L  I+IYK   DG++ MS H RK +I +FY V+ PSL +L G    +++ ++ 
Sbjct: 62  ----ALGLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGI--TDVEERK 115

Query: 130 PSSIEGSRYGKKVIEGDEKLTNVDLQREDECGICLEPCTKIVLPYCCHAMCIKCY 184
              I   RY KK      K++ +DL+RE+ECGICLE   K+VLP C H+MCI CY
Sbjct: 116 QKEICDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCY 170