Miyakogusa Predicted Gene

Lj0g3v0348419.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0348419.1 tr|I0Z139|I0Z139_9CHLO DUF1350-domain-containing
protein OS=Coccomyxa subellipsoidea C-169 PE=4
SV=1,38.33,0.0000000000005,DUF1350,Protein of unknown function
DUF1350,NODE_47747_length_1694_cov_56.427391.path2.1
         (409 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G43540.1 | Symbols:  | Protein of unknown function (DUF1350) ...   506   e-143
AT3G43540.2 | Symbols:  | Protein of unknown function (DUF1350) ...   449   e-126
AT5G47860.1 | Symbols:  | Protein of unknown function (DUF1350) ...   139   5e-33

>AT3G43540.1 | Symbols:  | Protein of unknown function (DUF1350) |
           chr3:15430770-15433035 FORWARD LENGTH=373
          Length = 373

 Score =  506 bits (1302), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 242/371 (65%), Positives = 302/371 (81%), Gaps = 1/371 (0%)

Query: 39  GLFSKSFHFYTLSPRMVAGRTKMVSNVYVGRDTSIRISSKMFTELDSCLVIPPTPYRAKP 98
           GL + SF    L P  +  +     ++ V      R ++K++T LDSCLVIPP P   KP
Sbjct: 4   GLATSSFLGTQLIPATLFSKRARALSLTVTATGGSR-NNKVYTRLDSCLVIPPPPKFKKP 62

Query: 99  RAIVKFLGGAFIGAVPEVTYGYLIECLAKEGFLVVVVPYNVTFDHAQAAKQVYEKFHTCL 158
           RAIVKFLGGAF+GAVPE+TY YL E LAKEG+L+V VPYNVTFDH QAAKQVYE+F++CL
Sbjct: 63  RAIVKFLGGAFVGAVPELTYSYLKELLAKEGYLIVSVPYNVTFDHEQAAKQVYERFNSCL 122

Query: 159 DTLLTSGLPQANLSPAQLGDLPLFCVGHSNGALLQLLTGSLFSEKLPKANAIIAYNNRPA 218
           DT+++SG+P +NL P  L DLPLF VGHSNGALLQ+LTGS F+EK+PK NAII++NN+ A
Sbjct: 123 DTIVSSGIPNSNLKPGDLADLPLFSVGHSNGALLQVLTGSYFAEKIPKVNAIISFNNKSA 182

Query: 219 TEAVPYFEQLGPAVSQMMPVMETNPVYSIARNASGDAWKMMLDSFGSIIQESEQELLNSL 278
           TEAVPYFEQLGP + QM+P++E +PVY +ARNASGD  K++LD+ G+ I  ++QE L S 
Sbjct: 183 TEAVPYFEQLGPLIQQMLPMVEASPVYEMARNASGDVLKLLLDTAGTTILNNDQEALKSF 242

Query: 279 TKFVDQLPSVMNEITQGVSEFKPTPSENRDCFKCSYNVENTLLVKFNSDAIDETDILEET 338
           TK VDQLPSV  E+ QGVSEF+P+P ENR+CFKCSY+V +TLLV+FNSDAIDETD+LEET
Sbjct: 243 TKLVDQLPSVFGEVGQGVSEFRPSPLENRNCFKCSYSVPHTLLVQFNSDAIDETDLLEET 302

Query: 339 LKPRVESFGGTLEKVLLNGNHITACIQEPRWQVGKLYTPADAVAQVLKSLSLSDTRILAR 398
           L+PR+ES GGTLEKV LNGNH+T CIQ+P+WQ+G +YTPADAVAQ LK++ LS+TR+L+R
Sbjct: 303 LRPRIESIGGTLEKVRLNGNHLTPCIQDPKWQIGTVYTPADAVAQALKTIPLSETRVLSR 362

Query: 399 TISDWFRRFED 409
           TI DWFRRFE+
Sbjct: 363 TIVDWFRRFEN 373


>AT3G43540.2 | Symbols:  | Protein of unknown function (DUF1350) |
           chr3:15431063-15433035 FORWARD LENGTH=301
          Length = 301

 Score =  449 bits (1154), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 203/294 (69%), Positives = 252/294 (85%)

Query: 116 VTYGYLIECLAKEGFLVVVVPYNVTFDHAQAAKQVYEKFHTCLDTLLTSGLPQANLSPAQ 175
           V   YL E LAKEG+L+V VPYNVTFDH QAAKQVYE+F++CLDT+++SG+P +NL P  
Sbjct: 8   VICSYLKELLAKEGYLIVSVPYNVTFDHEQAAKQVYERFNSCLDTIVSSGIPNSNLKPGD 67

Query: 176 LGDLPLFCVGHSNGALLQLLTGSLFSEKLPKANAIIAYNNRPATEAVPYFEQLGPAVSQM 235
           L DLPLF VGHSNGALLQ+LTGS F+EK+PK NAII++NN+ ATEAVPYFEQLGP + QM
Sbjct: 68  LADLPLFSVGHSNGALLQVLTGSYFAEKIPKVNAIISFNNKSATEAVPYFEQLGPLIQQM 127

Query: 236 MPVMETNPVYSIARNASGDAWKMMLDSFGSIIQESEQELLNSLTKFVDQLPSVMNEITQG 295
           +P++E +PVY +ARNASGD  K++LD+ G+ I  ++QE L S TK VDQLPSV  E+ QG
Sbjct: 128 LPMVEASPVYEMARNASGDVLKLLLDTAGTTILNNDQEALKSFTKLVDQLPSVFGEVGQG 187

Query: 296 VSEFKPTPSENRDCFKCSYNVENTLLVKFNSDAIDETDILEETLKPRVESFGGTLEKVLL 355
           VSEF+P+P ENR+CFKCSY+V +TLLV+FNSDAIDETD+LEETL+PR+ES GGTLEKV L
Sbjct: 188 VSEFRPSPLENRNCFKCSYSVPHTLLVQFNSDAIDETDLLEETLRPRIESIGGTLEKVRL 247

Query: 356 NGNHITACIQEPRWQVGKLYTPADAVAQVLKSLSLSDTRILARTISDWFRRFED 409
           NGNH+T CIQ+P+WQ+G +YTPADAVAQ LK++ LS+TR+L+RTI DWFRRFE+
Sbjct: 248 NGNHLTPCIQDPKWQIGTVYTPADAVAQALKTIPLSETRVLSRTIVDWFRRFEN 301


>AT5G47860.1 | Symbols:  | Protein of unknown function (DUF1350) |
           chr5:19381656-19384310 FORWARD LENGTH=431
          Length = 431

 Score =  139 bits (349), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 137/268 (51%), Gaps = 37/268 (13%)

Query: 80  FTELDSCLVIPPTPYRAKPRAIVKFLGGAFIGAVPEVTYGYLIECLAKEGFLVVVVPYNV 139
           ++E++   V+   P  +KP+ +V F+GG F+GA P++TY   +E LA++  LV+  PY  
Sbjct: 89  WSEVEGAWVL--KPRNSKPKMVVHFIGGIFVGAAPQLTYRLFLERLAEKDVLVIATPYAS 146

Query: 140 TFDHAQAAKQVYEKFHTCLDTLLTSGLPQANLSPAQLGDLPLFCVGHSNGALLQLLTGSL 199
            FDH   A +V  K+  C  +L             ++ DLP F +GHS G+++ LL GS 
Sbjct: 147 GFDHFNIADEVQFKYDRCCRSL-----------QEEVQDLPSFGIGHSLGSVIHLLIGSR 195

Query: 200 FSEKLPKANAIIAYNNRPATEAVPYF--------EQLGPAVSQMMPVMETNPVYSIARNA 251
           ++ +    N  +A+NN+ A+ A+P F        + LGP +SQ    + T+P   +    
Sbjct: 196 YAVQR-NGNVFMAFNNKEASLAIPLFSPVLVPMAQSLGPLLSQ----VATSPTIRLG--- 247

Query: 252 SGDAWKMMLDSFGSIIQESEQELLNSLTKFVDQLPSVMNEITQGVSEFKPTPSENRDCFK 311
             +  +  L++    I       +  +   V+QLP +  ++ +G  +F P P E R   +
Sbjct: 248 -AEMTRKQLETLSPPI-------MKQILPLVEQLPPLYMDLVKGREDFVPKPEETRRLIR 299

Query: 312 CSYNVENTLLVKFNSDAIDETDILEETL 339
             Y +   LL+KF  D+IDET IL + L
Sbjct: 300 SYYGISRNLLIKFEDDSIDETSILAQVL 327