Miyakogusa Predicted Gene
- Lj0g3v0348219.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0348219.1 tr|G7L6K3|G7L6K3_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_7g0,23.04,5e-18,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
,CUFF.23910.1
(378 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 400 e-112
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 2e-50
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 127 2e-29
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 7e-29
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 7e-29
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 7e-27
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 1e-26
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 117 2e-26
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 1e-25
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 112 5e-25
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 7e-25
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 7e-25
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 2e-24
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 6e-24
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 1e-23
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 4e-23
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 5e-23
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 5e-23
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 6e-23
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 6e-23
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 1e-22
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 1e-22
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 103 1e-22
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 2e-22
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 3e-22
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 4e-22
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 8e-22
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 8e-22
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 9e-22
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 100 2e-21
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 6e-21
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 8e-21
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 97 2e-20
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 2e-20
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 4e-20
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 6e-20
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 7e-20
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 8e-20
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 8e-20
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 9e-20
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 3e-19
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 1e-18
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 2e-18
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 90 3e-18
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 87 2e-17
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 5e-17
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 85 7e-17
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 9e-17
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 84 1e-16
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 82 4e-16
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 3e-15
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 6e-15
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 78 8e-15
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 8e-15
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 9e-15
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 76 4e-14
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 76 4e-14
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 6e-14
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 74 2e-13
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 74 2e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 74 2e-13
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 74 2e-13
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 70 2e-12
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 69 5e-12
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 9e-12
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 5e-11
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 6e-11
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 64 2e-10
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 62 8e-10
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 8e-10
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 60 3e-09
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 58 1e-08
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 57 2e-08
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 56 5e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 55 9e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 54 1e-07
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 54 1e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 54 2e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 54 2e-07
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 3e-07
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 53 3e-07
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 3e-07
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 3e-07
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 53 4e-07
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 5e-07
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 5e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 7e-07
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 1e-06
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 50 4e-06
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 5e-06
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 49 5e-06
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 400 bits (1027), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/361 (55%), Positives = 266/361 (73%), Gaps = 1/361 (0%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
F+PD CTFN LI +HC AG+LD A+KVF+ M N ++ DSASYS+LIR LC R ++D+AE
Sbjct: 349 FAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAE 408
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYM 126
LF+ELFEKE++L K +PLAA+Y P+F+YLC +GKT++AE+V RQ+MKRG QDP SY
Sbjct: 409 TLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYK 468
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
T+I GHCREG ++ YELL+ MLRR+F+PD+E Y+ LIDG L+ + LLA +TL++ML+S
Sbjct: 469 TLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRS 528
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
SYLP +T+HS+LA L ++ F +ES + +ML++ IRQNI+LST+ + LLF ++KA
Sbjct: 529 SYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKA 588
Query: 247 FEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCE 306
F IV LLY G+ VK+EE++ +LC+ KL +A L+LF L+ VDID CN VI GLC+
Sbjct: 589 FLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCK 648
Query: 307 INRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGL-ENLDRSV 365
R EAF L ELVE G HQ+L+C L ALEA GK EE F+SKR+ L E+ D SV
Sbjct: 649 HKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWEELQFVSKRMATLRESDDCSV 708
Query: 366 L 366
L
Sbjct: 709 L 709
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 158/383 (41%), Gaps = 26/383 (6%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M+ G +PD+ TFNTLI+ C +DEA ++F++M+ + D +Y+ +I LC+ G
Sbjct: 199 MRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAG 258
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
A + + +K P SY + + C + +A V ++ RG +
Sbjct: 259 KVKIAHNVLSGMLKKAT-----DVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLK 313
Query: 121 -DPLSYMTVIMGHCREGAYENGYELLIWM--LRRDFLPDVEIYDCLIDGFLQKDKPLLAM 177
+ ++Y T+I G Y+ ++LI F PD ++ LI AM
Sbjct: 314 PNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAM 373
Query: 178 ETLEKMLKSSYLPKTSTWHSILARLL--------EKGFPHESARVTVMMLDRNIRQNINL 229
+ ++ML P ++++ S+L R L + +E V++ +
Sbjct: 374 KVFQEMLNMKLHPDSASY-SVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAA 432
Query: 230 STKSIELLFGHGHRDKAFEIVELLYKKGF--CVKIEEVVQFLCKRGKLPEARKLLLFSLK 287
E L +G +A ++ L K+G + ++ C+ GK A +LL+ L+
Sbjct: 433 YNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLR 492
Query: 288 NHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEE 347
D++ +I GL +I L A ++ T + ++ L R E
Sbjct: 493 REFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANE 552
Query: 348 A-----AFISKRIPGLENLDRSV 365
+ + KRI +N+D S
Sbjct: 553 SFCLVTLMLEKRIR--QNIDLST 573
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 14 FNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELF 73
FN+LI S+ +AG E++K+F+ MK ++ +++ L+ L +RG A LFDE+
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 74 EKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDPLSYMTVIMGH 132
+G P + ++ + C++ +A R+ + + + D ++Y T+I G
Sbjct: 201 R------TYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGL 254
Query: 133 CREGAYENGYELLIWMLRR--DFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLP 190
CR G + + +L ML++ D P+V Y L+ G+ K + A+ ML P
Sbjct: 255 CRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKP 314
Query: 191 KTSTWHSILARLLE 204
T+++++ L E
Sbjct: 315 NAVTYNTLIKGLSE 328
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 31/297 (10%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENM-KNFQVTADSASYSILIRNLCQRGDYDK 64
G SP TFN+L+ G A +F+ M + + VT DS +++ LI C+ D+
Sbjct: 168 GISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDE 227
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ---D 121
A ++F ++ E+ C P +Y I LC GK + A VL ++K+ T +
Sbjct: 228 AFRIFKDM---ELYHC----NPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPN 280
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+SY T++ G+C + + + ML R P+ Y+ LI G + + + ++
Sbjct: 281 VVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR----YDEIK 336
Query: 182 KMLK------SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIE 235
+L +++ P T++ ++ + G + +V ML+ + + + I
Sbjct: 337 DILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIR 396
Query: 236 LLFGHGHRDKAFEIVELLYKKGFCVKIEE----------VVQFLCKRGKLPEARKLL 282
L D+A + L++K + +E + ++LC GK +A K+
Sbjct: 397 TLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVF 453
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 191/349 (54%), Gaps = 3/349 (0%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D F L+ S AG++ A +V + M V A++ Y +LI N C+ Y++A KL
Sbjct: 395 DNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLL 454
Query: 70 DELFEKEIVLCKFGSQPLAAS-YKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTV 128
D L EKEI+L + + S Y PI +YLC +G+T KAE + RQ+MKRG QD + +
Sbjct: 455 DTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNL 514
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
I GH +EG ++ YE+L M RR + Y+ LI ++ K +P A L+ M++ +
Sbjct: 515 IRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGH 574
Query: 189 LPKTSTWHSILARLLEKGFPHESARVTVMMLDRN--IRQNINLSTKSIELLFGHGHRDKA 246
+P +S + S++ L E G ++RV ++M+D+N I N++L K +E L GH ++A
Sbjct: 575 VPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEA 634
Query: 247 FEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCE 306
++LL + G ++ ++ L ++GK A KLL F L+ +++ + V+ L
Sbjct: 635 LGRIDLLNQNGHTADLDSLLSVLSEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLG 694
Query: 307 INRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
+ L A+ + +++EKG + ++L+ +L G ++A +S+ I
Sbjct: 695 AGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQEGNTKQADVLSRMI 743
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 166/369 (44%), Gaps = 45/369 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SPD TFNT+I+ C +DEA K+F MK ++ SY+ +I+ D
Sbjct: 285 GISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDG 344
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKR--GTQDPL 123
++F+E+ G +P A +Y + LC+ GK +A+ +L+ +M + +D
Sbjct: 345 LRIFEEMRSS-------GIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNS 397
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLI----------------DGF 167
++ +++ + G E+L M + + Y LI D
Sbjct: 398 IFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTL 457
Query: 168 LQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNI 227
++K+ L +TLE M S+Y P I+ L G ++ + ++ R ++
Sbjct: 458 IEKEIILRHQDTLE-MEPSAYNP-------IIEYLCNNGQTAKAEVLFRQLMKRGVQDQD 509
Query: 228 NLSTKSIELLFGH---GHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKL 281
L+ L+ GH G+ D ++EI++++ ++G E +++ +G+ +A+
Sbjct: 510 ALNN----LIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTA 565
Query: 282 LLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEK--GLHQELTCLNDLVTAL 339
L +++ H D L +VI L E RV A + +++K G+ + + ++ AL
Sbjct: 566 LDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEAL 625
Query: 340 EARGKVEEA 348
RG VEEA
Sbjct: 626 LMRGHVEEA 634
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 154/358 (43%), Gaps = 30/358 (8%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D F LI S+ AG + E++K+F+ MK+ V SY+ L + + +RG Y A
Sbjct: 180 GVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMA 239
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
++ F+++ + G +P +Y + + A R + RG + D +
Sbjct: 240 KRYFNKMVSE-------GVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDAT 292
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ T+I G CR + +L + M P V Y +I G+L D+ + E+M
Sbjct: 293 FNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMR 352
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH---G 241
S P +T+ ++L L + G E+ + M+ ++I N + ++LL G
Sbjct: 353 SSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDN--SIFLKLLVSQSKAG 410
Query: 242 HRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLL--------LFSLKNHH 290
A E+++ + + +++ CK A KLL + ++
Sbjct: 411 DMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTL 470
Query: 291 NVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
++ N +I LC + +A L +L+++G+ Q+ LN+L+ RG +E
Sbjct: 471 EMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGV-QDQDALNNLI-----RGHAKEG 522
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 176/370 (47%), Gaps = 13/370 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENM-KNFQVTADSASYSILIRNLCQRGDYDK 64
GF D+ +L+ C NL +ALKVF+ M K +S SYSILI LC+ G ++
Sbjct: 225 GFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEE 284
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL- 123
A L D++ EK G QP +Y + + LC+ G KA + +++ RG + +
Sbjct: 285 AFGLKDQMGEK-------GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH 337
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y +I G CR+G E + M++ P V Y+ LI+G+ + + + A E L M
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
K + P T++ ++ L G P+++ + MLD + +I I+ L GH
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457
Query: 244 DKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
+ A++++ + C+ ++ CK+GK A L L+ ++D +
Sbjct: 458 NTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTL 517
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLEN 360
I G+C++ + +A + LV+ + LN ++ L KV+E + +I L
Sbjct: 518 IDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKL-G 576
Query: 361 LDRSVLSYSS 370
L SV++Y++
Sbjct: 577 LVPSVVTYTT 586
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 110/256 (42%), Gaps = 8/256 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G SPD ++N LI C G+++ A K+ +M F + D +++ +I C++G D
Sbjct: 434 DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKAD 493
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
A + K I L + L +C+ GKTR A +L ++K
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTL-------IDGVCKVGKTRDALFILETLVKMRILTTP 546
Query: 124 SYMTVIMGHCREGA-YENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+ VI+ +G + +L + + +P V Y L+DG ++ + LE
Sbjct: 547 HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILEL 606
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M S LP + I+ L + G E+ ++ M D + N T ++ +G
Sbjct: 607 MKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGK 666
Query: 243 RDKAFEIVELLYKKGF 258
D+A E V + ++G+
Sbjct: 667 LDRALETVRAMVERGY 682
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 161/382 (42%), Gaps = 40/382 (10%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G+ G P T T+ LI + C G +D+A +F+ M + +Y++LI LC+ G
Sbjct: 293 GEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKI 352
Query: 63 DKA---------EKLFDEL-------------------FEKEIVLCKFGSQPLAASYKPI 94
++A +++F + FE V+ K +P ++ +
Sbjct: 353 EEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 95 FQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDF 153
+ LC GK KA +L++++ G + D +SY +I G CREG Y+LL M D
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 154 LPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESAR 213
PD + +I+ F ++ K +A L ML+ T +++ + + G R
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVG----KTR 528
Query: 214 VTVMMLDRNIRQNINLSTKSIELLFGHGHRD-KAFEIVELLYKKGFCVKIEEVVQF---- 268
+ +L+ ++ I + S+ ++ + K E + +L K + VV +
Sbjct: 529 DALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLV 588
Query: 269 --LCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLH 326
L + G + + ++L + ++ +I GLC+ RV EA L + + G+
Sbjct: 589 DGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Query: 327 QELTCLNDLVTALEARGKVEEA 348
+V GK++ A
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRA 670
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 114/263 (43%), Gaps = 5/263 (1%)
Query: 91 YKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWML 149
Y+ I LC++G T AE + +I+K G D ++++G CR + ++ M
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 150 RR-DFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFP 208
+ P+ Y LI G + + A ++M + P T T+ ++ L ++G
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 209 HESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEV 265
++ + M+ R + N++ T I+ L G ++A + + K + +
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377
Query: 266 VQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGL 325
+ CK G++ A +LL K ++ N ++ GLC + + +A L +++ GL
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437
Query: 326 HQELTCLNDLVTALEARGKVEEA 348
++ N L+ L G + A
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNTA 460
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 113/252 (44%), Gaps = 7/252 (2%)
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+ Y T++ C+ G E + +L+ F+ D I L+ GF + A++ +
Sbjct: 196 IDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDV 255
Query: 183 MLKSSYLPKTSTWHSILAR-LLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
M K S +SIL L E G E+ + M ++ + + T I+ L G
Sbjct: 256 MSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315
Query: 242 HRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
DKAF + + + +G + ++ LC+ GK+ EA + +K+ + N
Sbjct: 316 LIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYN 375
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGL 358
A+I G C+ RV+ AF L + ++ + N+L+ L GK +A + KR+ L
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM--L 433
Query: 359 EN-LDRSVLSYS 369
+N L ++SY+
Sbjct: 434 DNGLSPDIVSYN 445
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 149/345 (43%), Gaps = 60/345 (17%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D GFSP T+N LI+ HC G +++A+ V E+MK ++ D SYS ++ C+ D D
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
+A ++ E+ EK G +P +Y + Q CE +T++A + ++++ G D
Sbjct: 468 EALRVKREMVEK-------GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y +I +C EG E +L M+ + LPDV Y LI+G ++ + A L K
Sbjct: 521 FTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLK 580
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
+ +P T+H++ I N+ KS+ L
Sbjct: 581 LFYEESVPSDVTYHTL------------------------IENCSNIEFKSVVSLI---- 612
Query: 243 RDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
KGFC+K G + EA ++ L +H D N +I
Sbjct: 613 -------------KGFCMK-----------GMMTEADQVFESMLGKNHKPDGTAYNIMIH 648
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEE 347
G C + +A+ L E+V+ G + LV AL GKV E
Sbjct: 649 GHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 156/348 (44%), Gaps = 17/348 (4%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SP+ T+N LI C AGN+D AL +F+ M+ + +Y+ LI C+ D K
Sbjct: 202 SPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFK 261
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYM 126
L + K G +P SY + LC G+ ++ VL ++ +RG + D ++Y
Sbjct: 262 LLRSMALK-------GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 314
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
T+I G+C+EG + + MLR P V Y LI + AME L++M
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH---GHR 243
P T+ +++ +KG+ +E+ RV M D ++ L+ GH G
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSV---VTYNALINGHCVTGKM 431
Query: 244 DKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
+ A ++E + +KG V V+ C+ + EA ++ ++ D +++
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
I G CE R EA L E++ GL + L+ A G +E+A
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 166/356 (46%), Gaps = 15/356 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ P+T TF+TLI+ C G + EAL++ + M D + + L+ LC G +A
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L D++ E +G QP A +Y P+ +C+ G+T A +LR++ +R + D +
Sbjct: 213 MLLIDKMVE-------YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C+ G+ +N + L M + ++ Y+ LI GF + + L M+
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K P T+ ++ +++G E+ + M+ R I + T I+ H D
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC--NA 299
KA ++V+L+ KG I ++ CK ++ + L LF + V D N
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG--LELFRKMSLRGVVADTVTYNT 443
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
+I G CE+ ++ A L E+V + + + L+ L G+ E+A I ++I
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 159/347 (45%), Gaps = 40/347 (11%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D ++ +I C G+LD A +F M+ +T + +Y+ILI C G +D KL
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTV 128
++ +++I P ++ + + GK R+AE + ++++ RG D ++Y ++
Sbjct: 322 RDMIKRKI-------NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
I G C+E + +++ M+ + P++ ++ LI+G+ + ++ +E KM
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 189 LPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFE 248
+ T T+++++ E G + + + M+ R + NI ++ L +G +KA E
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 494
Query: 249 IVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEIN 308
I E KIE K+ +DI + N +I G+C +
Sbjct: 495 IFE---------KIE-----------------------KSKMELDIGIYNIIIHGMCNAS 522
Query: 309 RVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
+V +A+ L L KG+ + N ++ L +G + EA + +++
Sbjct: 523 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 106/211 (50%), Gaps = 10/211 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ TFN LI+ +C A +D+ L++F M V AD+ +Y+ LI+ C+ G + A
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
++LF E+ +++ P +YK + LC++G++ KA + +I K + D
Sbjct: 458 KELFQEMVSRKV-------PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL-EKM 183
Y +I G C ++ ++L + + P V+ Y+ +I G +K PL E L KM
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG-PLSEAELLFRKM 569
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARV 214
+ + P T++ ++ L G +S ++
Sbjct: 570 EEDGHAPDGWTYNILIRAHLGDGDATKSVKL 600
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 187/424 (44%), Gaps = 81/424 (19%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT TF+TL++ C G + EA+ + + M + D + S LI LC +G +A
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ----- 120
L D + E +G QP +Y P+ LC+ G + A + R++ +R +
Sbjct: 195 LVLIDRMVE-------YGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 121 -------------------------------DPLSYMTVIMGHCREGAYENGYELLIWML 149
D ++Y ++I G C +G +++G ++L M+
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 150 RRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPH 209
R+ +PDV + LID F+++ K L A E +M+ P T T++S++ ++ H
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 210 ESARVTVMMLDRNIRQNI------------------------NLSTKSI--------ELL 237
E+ ++ +M+ + +I +S+K + L+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 238 FG---HGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHN 291
G G + A E+ + + +G V ++ LC G+L +A ++ K+
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 292 VDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
+ I + N +I G+C ++V +A+ L L +KG+ ++ N ++ L +G + EA +
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547
Query: 352 SKRI 355
+++
Sbjct: 548 FRKM 551
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 12/207 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+T T+NTL+ C +G L+ A ++F+ M + V +Y IL+ LC G+ +KA
Sbjct: 415 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 474
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
++F+++ + + L Y I +C K A + + +G + D ++
Sbjct: 475 LEIFEKMQKSRMTLG-------IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C++G+ L M PD Y+ LI L + ++E +E+M
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587
Query: 185 KSSYLPKTSTWHSIL----ARLLEKGF 207
+ +ST ++ R L+K F
Sbjct: 588 VCGFSADSSTIKMVIDMLSDRRLDKSF 614
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 107/248 (43%), Gaps = 20/248 (8%)
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+++G C+ G NG E D+ +I+ + +K K L A L + K
Sbjct: 88 LVLGFCK-GMELNGIE-----------HDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLG 135
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
Y P T T+ +++ +G E+ + M++ R ++ + I L G +A
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195
Query: 248 EIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC--NAVIL 302
+++ + + GF V V+ LCK G A L LF N+ + + VI
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGN--SALALDLFRKMEERNIKASVVQYSIVID 253
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLD 362
LC+ +A L E+ KG+ ++ + L+ L GK ++ A + + + G N+
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG-RNII 312
Query: 363 RSVLSYSS 370
V+++S+
Sbjct: 313 PDVVTFSA 320
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 139/352 (39%), Gaps = 56/352 (15%)
Query: 41 QVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPI-FQYLC 99
+T SY +RN + A LF+ + + S+PL PI F LC
Sbjct: 30 SITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQ---------SRPLPT---PIDFNRLC 77
Query: 100 EH-GKTRKAERVL---RQIMKRGTQDPLSYMTVIMG-HCREGAYENGYELLIWMLRRDFL 154
+T++ + VL + + G + + MT+++ +CR+ + +L + +
Sbjct: 78 SAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYE 137
Query: 155 PDVEIYDCLIDGFL-----------------QKDKPLL------------------AMET 179
PD + L++GF K +P L A+
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
+++M++ + P T+ +L RL + G + + M +RNI+ ++ + I+ L
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 240 HGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL 296
G D A + + KG V ++ LC GK + K+L + + D+
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+A+I + ++LEA L E++ +G+ + N L+ + EA
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 369
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 162/356 (45%), Gaps = 15/356 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT TF+TLI+ C G + EAL++ + M + + L+ LC G A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L D + E G QP +Y P+ + +C+ G+T A +LR++ +R + D +
Sbjct: 197 VLLIDRMVET-------GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C++G+ +N + L M + F D+ IY LI GF + + L M+
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K P + +++ +++G E+ + M+ R I + T I+ D
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC--NA 299
KA +++L+ KG I ++ CK + + L LF + V D N
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG--LELFRKMSLRGVVADTVTYNT 427
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
+I G CE+ ++ A L E+V + + ++ L+ L G+ E+A I ++I
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 158/347 (45%), Gaps = 40/347 (11%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D ++ +I C G+LD A +F M+ AD Y+ LIR C G +D KL
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTV 128
++ +++I P ++ + + GK R+AE + +++++RG + D ++Y ++
Sbjct: 306 RDMIKRKIT-------PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
I G C+E + +L M+ + P++ ++ LI+G+ + + +E KM
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 189 LPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFE 248
+ T T+++++ E G + + M+ R +R +I ++ L +G +KA E
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 249 IVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEIN 308
I E KIE K+ +DI + N +I G+C +
Sbjct: 479 IFE---------KIE-----------------------KSKMELDIGIYNIIIHGMCNAS 506
Query: 309 RVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
+V +A+ L L KG+ ++ N ++ L +G + EA + +++
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 8/210 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ TFN LI+ +C A +D+ L++F M V AD+ +Y+ LI+ C+ G + A
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
++LF E+ + + +P SYK + LC++G+ KA + +I K + D
Sbjct: 442 KELFQEMVSRRV-------RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C ++ ++L + + PDV+ Y+ +I G +K A KM
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARV 214
+ + P T++ ++ L +G +SA++
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKL 584
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 33/198 (16%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G DT T+NTLI C G L+ A ++F+ M + +V D SY IL+ LC G+ +KA
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKA 476
Query: 66 EKLFDELFEKEI-------------------------VLCKF---GSQPLAASYKPIFQY 97
++F+++ + ++ + C G +P +Y +
Sbjct: 477 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG 536
Query: 98 LCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
LC+ G +A+ + R++ + G + + +Y +I H EG +L+ + R F D
Sbjct: 537 LCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVD 596
Query: 157 VE----IYDCLIDGFLQK 170
+ D L DG L+K
Sbjct: 597 ASTVKMVVDMLSDGRLKK 614
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 160/375 (42%), Gaps = 34/375 (9%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
FSPDT T+N +I S CS G LD ALKV + + +Y+ILI G D+A
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL 248
Query: 67 KLFDELFEKEIV------------LCK----------------FGSQPLAASYKPIFQYL 98
KL DE+ + + +CK G +P SY + + L
Sbjct: 249 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRAL 308
Query: 99 CEHGKTRKAERVLRQIMKRGTQDP--LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
GK + E+++ ++ DP ++Y +I CR+G E LL M + PD
Sbjct: 309 LNQGKWEEGEKLMTKMFSEKC-DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 367
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
YD LI F ++ + +A+E LE M+ LP ++++LA L + G ++ +
Sbjct: 368 AYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFG 427
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRG 273
+ + N + L+ G + +A ++ + G + ++ LC+ G
Sbjct: 428 KLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487
Query: 274 KLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLN 333
+ EA +LL+ + + N V+LG C+ +R+ +A + +V G T
Sbjct: 488 MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547
Query: 334 DLVTALEARGKVEEA 348
L+ + G EA
Sbjct: 548 VLIEGIGFAGYRAEA 562
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 151/344 (43%), Gaps = 11/344 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD +N LI+ C +D+A +V + M++ + D+ +Y+I+I +LC RG D A K+
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
++L QP +Y + + G +A +++ +++ RG + D +Y T
Sbjct: 216 LNQLLSDN-------CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G C+EG + +E++ + + PDV Y+ L+ L + K + + KM
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T+ ++ L G E+ + +M ++ + + I G D A
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388
Query: 248 EIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
E +E + G V V+ LCK GK +A ++ + + + N + L
Sbjct: 389 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+ A + E++ G+ + N +++ L G V+EA
Sbjct: 449 WSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEA 492
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 131/297 (44%), Gaps = 14/297 (4%)
Query: 57 CQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK 116
C+ G+Y ++ L + + K G P + + KA RV+ + K
Sbjct: 100 CRSGNYIESLHLLETMVRK-------GYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK 152
Query: 117 RGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLA 176
G D +Y +I G C+ ++ +L M +DF PD Y+ +I + K LA
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 177 METLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIEL 236
++ L ++L + P T+ ++ + +G E+ ++ ML R ++ ++ I
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 237 LFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLL--LFSLKNHHN 291
+ G D+AFE+V L KG + +++ L +GK E KL+ +FS K N
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 292 VDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
V + +I LC ++ EA L + EKGL + + L+ A G+++ A
Sbjct: 333 VVT--YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 108/247 (43%), Gaps = 19/247 (7%)
Query: 133 CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFL---QKDKPLLAMETLEKMLKSSYL 189
CR G Y LL M+R+ + PDV + LI GF K + ME LEK +
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ---- 155
Query: 190 PKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG----HGHRDK 245
P +++++ + ++ RV LDR ++ + T + ++ G G D
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRV----LDRMRSKDFSPDTVTYNIMIGSLCSRGKLDL 211
Query: 246 AFEIVELLYK---KGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
A +++ L + + +++ G + EA KL+ L D+ N +I
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIR 271
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLD 362
G+C+ V AF + L KG ++ N L+ AL +GK EE + ++ E D
Sbjct: 272 GMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS-EKCD 330
Query: 363 RSVLSYS 369
+V++YS
Sbjct: 331 PNVVTYS 337
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 163/382 (42%), Gaps = 32/382 (8%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ P+T TFNTLIH EA+ + + M D +Y +++ LC+RGD D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 66 EKLFDELFEKEI------------VLCKF----------------GSQPLAASYKPIFQY 97
L +++ + ++ LCK+ G +P +Y +
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 98 LCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
LC +G+ A R+L +++R D ++ +I +EG +L M++R P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
+ Y LI+GF D+ A + E M+ P T+++++ + E V
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRG 273
M R + N I+ LF G D A EI + + G I ++ LCK G
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 274 KLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLN 333
KL +A + + ++ I N +I G+C+ +V + + L L KG+ ++ N
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 334 DLVTALEARGKVEEAAFISKRI 355
+++ +G EEA + K +
Sbjct: 541 TMISGFCRKGSKEEADALFKEM 562
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 159/357 (44%), Gaps = 15/357 (4%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G P +NT+I C ++D+AL +F+ M+ + + +YS LI LC G +
Sbjct: 250 GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 309
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP-- 122
A +L ++ E++I P ++ + + GK +AE++ +++KR DP
Sbjct: 310 ASRLLSDMIERKI-------NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI-DPSI 361
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
++Y ++I G C + ++ +M+ + PDV Y+ LI GF + + ME +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M + + T T++ ++ L + G + + M+ + NI ++ L +G
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 243 RDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLL-FSLKNHHNVDIDLCN 298
+KA + E L + I +++ +CK GK+ + L SLK D+ N
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP-DVVAYN 540
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
+I G C EA L E+ E G C N L+ A G E +A + K +
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 167/394 (42%), Gaps = 33/394 (8%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P F+ L+ + D + + E M+N + + +YSILI C+R A +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 69 FDEL----FEKEIV------------------------LCKFGSQPLAASYKPIFQYLCE 100
++ +E IV + G QP ++ + L
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 101 HGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEI 159
H K +A ++ +++ +G Q D ++Y V+ G C+ G + + LL M + P V I
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 160 YDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMML 219
Y+ +IDG + A+ ++M P T+ S+++ L G +++R+ M+
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 220 DRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLP 276
+R I ++ + I+ G +A ++ + + K+ V ++ C +L
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 277 EARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLV 336
EA+++ F + H D+ N +I G C+ RV E + E+ ++GL N L+
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 337 TALEARGKVEEAAFISKRIPGLENLDRSVLSYSS 370
L G + A I K + + + ++++Y++
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVS-DGVPPNIMTYNT 471
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 172/382 (45%), Gaps = 32/382 (8%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT TF TLIH EA+ + + M + +Y +++ LC+RGD D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 66 EKLFDEL----FEKEIV--------LCKF----------------GSQPLAASYKPIFQY 97
L +++ E ++V LCK+ G +P +Y +
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 98 LCEHGKTRKAERVLRQIM-KRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
LC +G+ A ++L ++ K+ + +++ +I +EG + +L M++R PD
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
+ Y+ L++GF D+ A + E M+ P T+++++ + + +
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRG 273
M R + + T I+ LF G D A ++ + + G I ++ LC G
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484
Query: 274 KLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLN 333
KL +A ++ + K+ +DI + +I G+C+ +V + + L L KG+ + N
Sbjct: 485 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 544
Query: 334 DLVTALEARGKVEEAAFISKRI 355
+++ L ++ ++EA + K++
Sbjct: 545 TMISGLCSKRLLQEAYALLKKM 566
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 153/334 (45%), Gaps = 13/334 (3%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D FNT+I S C ++D+AL +F+ M+ + + +YS LI LC G + A +L
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTV 128
++ EK+I P ++ + + GK +AE++ ++KR D +Y ++
Sbjct: 319 SDMIEKKI-------NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
+ G C + ++ +M+ +D PDV Y+ LI GF + + E +M
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431
Query: 189 LPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFE 248
+ T T+ +++ L G + +V M+ + +I + ++ L +G +KA E
Sbjct: 432 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 491
Query: 249 IVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLL-FSLKNHHNVDIDLCNAVILGL 304
+ + + K + I +++ +CK GK+ + L SLK ++ N +I GL
Sbjct: 492 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP-NVVTYNTMISGL 550
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTA 338
C + EA+ L ++ E G N L+ A
Sbjct: 551 CSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 114/241 (47%), Gaps = 11/241 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T+NTLI C + +++ ++F M + + D+ +Y+ LI+ L GD D A+K+
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
F ++ G P +Y + LC +GK KA V + K + D Y T
Sbjct: 458 FKQMVSD-------GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 510
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G C+ G ++G++L + + P+V Y+ +I G K A L+KM +
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH-GHRDKA 246
LP + T+++++ L G SA + M R+ R + ST + H G DK+
Sbjct: 571 PLPNSGTYNTLIRAHLRDGDKAASAELIREM--RSCRFVGDASTIGLVANMLHDGRLDKS 628
Query: 247 F 247
F
Sbjct: 629 F 629
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G DT T+ TLI G+ D A KVF+ M + V D +YSIL+ LC G +KA
Sbjct: 430 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 489
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
++FD + + EI L + Y + + +C+ GK + + +G + + ++
Sbjct: 490 LEVFDYMQKSEIKLDIY-------IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 542
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G C + + Y LL M LP+ Y+ LI L+ + E + +M
Sbjct: 543 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
Query: 185 KSSYLPKTSTWHSILARLLEKG 206
++ ST ++A +L G
Sbjct: 603 SCRFVGDASTI-GLVANMLHDG 623
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/347 (18%), Positives = 147/347 (42%), Gaps = 11/347 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
FS + + ++ + LD+A+ +F M + ++ L+ + + +D
Sbjct: 45 AFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVV 104
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
L +++ EIV + +Y + C + A +L ++MK G + +
Sbjct: 105 ISLGEKMQRLEIVHGLY-------TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT 157
Query: 126 MTVIM-GHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
++ ++ G+C + L+ M+ + PD + LI G +K A+ +++M+
Sbjct: 158 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 217
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T+ ++ L ++G + + M I ++ + I+ L + H D
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
A + + + KG V ++ LC G+ +A +LL ++ N ++ NA+I
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 337
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+ + +EA L +++++ + ++ N LV ++++A
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 149/356 (41%), Gaps = 45/356 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT FNTL++ C + EAL++ + M + + L+ LC G A
Sbjct: 153 GYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDA 212
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L D + E G QP +Y P+ +C+ G+T A +LR++ +R + D +
Sbjct: 213 VVLIDRMVET-------GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C++G+ +N + L M + F D+ Y+ LI GF + + L M+
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K P T+ ++ +++G E+ ++ M+ R I N
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT----------------- 368
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
+ ++ CK +L EA +++ + + DI N +I G
Sbjct: 369 ---------------ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA-----FISKRI 355
C+ NR+ + L E+ +G+ N LV GK+E A +S+R+
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 165/365 (45%), Gaps = 32/365 (8%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P+ T+ +++ C +G A+++ M+ + D+ YSI+I LC+ G D A
Sbjct: 223 GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA 282
Query: 66 EKLFDEL----FEKEIV--------LCKFGS----------------QPLAASYKPIFQY 97
LF+E+ F+ +I+ C G P ++ +
Sbjct: 283 FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDS 342
Query: 98 LCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
+ GK R+A+++L+++M+RG + ++Y ++I G C+E E +++ M+ + PD
Sbjct: 343 FVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPD 402
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
+ ++ LI+G+ + ++ +E +M + T T+++++ + G + ++
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRG 273
M+ R +R +I ++ L +G +KA EI + K + I ++ +C
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNAS 522
Query: 274 KLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLN 333
K+ +A L +D N +I LC + + +A L ++ E+G + N
Sbjct: 523 KVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYN 582
Query: 334 DLVTA 338
L+ A
Sbjct: 583 ILIRA 587
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 24/230 (10%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TFN LI+ +C A +D+ L++F M V A++ +Y+ L++ CQ G + A
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+KLF E+ + + +P SYK + LC++G+ KA + +I K + D
Sbjct: 458 KKLFQEMVSRRV-------RPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
YM +I G C ++ ++L + + D Y+ +I +KD A KM
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 185 KSSYLPKTSTWHSIL------------ARLLEK----GFPHESARVTVMM 218
+ + P T++ ++ A L+E+ GFP + + V +++
Sbjct: 571 EEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 172/382 (45%), Gaps = 32/382 (8%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT TF TLIH EA+ + + M + +Y +++ LC+RGD D A
Sbjct: 110 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169
Query: 66 EKLFDEL----FEKEIV--------LCKF----------------GSQPLAASYKPIFQY 97
L +++ E ++V LCK+ G +P +Y +
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 98 LCEHGKTRKAERVLRQIM-KRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
LC +G+ A ++L ++ K+ + +++ +I +EG + +L M++R PD
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
+ Y+ LI+GF D+ A + E M+ P T+++++ + + +
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 349
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRG 273
M R + + T I+ LF G D A ++ + + G I ++ LC G
Sbjct: 350 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 274 KLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLN 333
KL +A ++ + K+ +DI + +I G+C+ +V + + L L KG+ + N
Sbjct: 410 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 469
Query: 334 DLVTALEARGKVEEAAFISKRI 355
+++ L ++ ++EA + K++
Sbjct: 470 TMISGLCSKRLLQEAYALLKKM 491
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 155/334 (46%), Gaps = 13/334 (3%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D FNT+I S C ++D+AL +F+ M+ + + +YS LI LC G + A +L
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTV 128
++ EK+I P ++ + + GK +AE++ ++KR D +Y ++
Sbjct: 244 SDMIEKKI-------NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
I G C + ++ +M+ +D PD++ Y+ LI GF + + E +M
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356
Query: 189 LPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFE 248
+ T T+ +++ L G + +V M+ + +I + ++ L +G +KA E
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416
Query: 249 IVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLL-FSLKNHHNVDIDLCNAVILGL 304
+ + + K + I +++ +CK GK+ + L SLK ++ N +I GL
Sbjct: 417 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP-NVVTYNTMISGL 475
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTA 338
C + EA+ L ++ E G + N L+ A
Sbjct: 476 CSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 114/241 (47%), Gaps = 11/241 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T+NTLI C + +++ ++F M + + D+ +Y+ LI+ L GD D A+K+
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
F ++ G P +Y + LC +GK KA V + K + D Y T
Sbjct: 383 FKQMVSD-------GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G C+ G ++G++L + + P+V Y+ +I G K A L+KM +
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH-GHRDKA 246
LP + T+++++ L G SA + M R+ R + ST + H G DK+
Sbjct: 496 PLPDSGTYNTLIRAHLRDGDKAASAELIREM--RSCRFVGDASTIGLVANMLHDGRLDKS 553
Query: 247 F 247
F
Sbjct: 554 F 554
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/393 (20%), Positives = 163/393 (41%), Gaps = 33/393 (8%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P FN L+ + D + + E M+ ++ + +Y+ILI C+R A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 69 FDEL----FEKEIV------------------------LCKFGSQPLAASYKPIFQYLCE 100
++ +E IV + + G +P ++ + L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 101 HGKTRKAERVLRQIMKRGTQDPL-SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEI 159
H K +A ++ ++++RG Q L +Y V+ G C+ G + + LL M DV I
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 160 YDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMML 219
++ +ID + A+ ++M P T+ S+++ L G +++++ M+
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 220 DRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLP 276
++ I N+ I+ G +A ++ + + K+ I ++ C +L
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 277 EARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLV 336
+A+++ F + D+D N +I G C+ RV + L E+ +GL + L+
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 337 TALEARGKVEEAAFISKRIPGLENLDRSVLSYS 369
L G + A + K++ + + +++YS
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVS-DGVPPDIMTYS 399
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G DT T+ TLI G+ D A KVF+ M + V D +YSIL+ LC G +KA
Sbjct: 355 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 414
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
++FD + + EI L + Y + + +C+ GK + + +G + + ++
Sbjct: 415 LEVFDYMQKSEIKLDIY-------IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 467
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G C + + Y LL M LPD Y+ LI L+ + E + +M
Sbjct: 468 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
Query: 185 KSSYLPKTSTWHSILARLLEKG 206
++ ST ++A +L G
Sbjct: 528 SCRFVGDASTI-GLVANMLHDG 548
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 165/351 (47%), Gaps = 16/351 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TFN LI + C A L A+ + E+M ++ + D +++ +++ + GD D A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT--QDPL 123
++ +++ E FG S I C+ G+ A ++++ + D
Sbjct: 244 LRIREQMVE-------FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY 296
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
++ T++ G C+ G ++ E++ ML+ + PDV Y+ +I G + + A+E L++M
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIE-LLFGHGH 242
+ P T T++++++ L ++ E+ + ++ + I ++ I+ L H
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 243 RDKAFEIVELLYKKGFCVKIE----EVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
R A E+ E + KG C E ++ LC +GKL EA +L + + N
Sbjct: 417 R-VAMELFEEMRSKG-CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
+I G C+ N+ EA + E+ G+ + N L+ L +VE+AA
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAA 525
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 157/367 (42%), Gaps = 42/367 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PDT +N +++ +L M + + D +++++LI+ LC+ A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+ ++ + +G P ++ + Q E G A R+ Q+++ G + +S
Sbjct: 209 ILMLED-------MPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVS 261
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRD-FLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
++ G C+EG E+ + M +D F PD ++ L++G + A+E ++ M
Sbjct: 262 VNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVM 321
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
L+ Y P T++S+++ L + G E+ V M+ R+ N I L
Sbjct: 322 LQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQV 381
Query: 244 DKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
++A E+ +L KG LP D+ N++I G
Sbjct: 382 EEATELARVLTSKGI----------------LP----------------DVCTFNSLIQG 409
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDR 363
LC A L E+ KG + N L+ +L ++GK++EA + K++ L R
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME-LSGCAR 468
Query: 364 SVLSYSS 370
SV++Y++
Sbjct: 469 SVITYNT 475
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 143/326 (43%), Gaps = 19/326 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PD T+N++I C G + EA++V + M + ++ +Y+ LI LC+ ++A
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+L L K I+ P ++ + Q LC R A + ++ +G + D +
Sbjct: 385 TELARVLTSKGIL-------PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 437
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I C +G + +L M V Y+ LIDGF + +K A E ++M
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH---- 240
+ T+++++ L + ++A+ ++D+ I + + L H
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQ----LMDQMIMEGQKPDKYTYNSLLTHFCRG 553
Query: 241 GHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
G KA +IV+ + G V ++ LCK G++ A KLL N+
Sbjct: 554 GDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAY 613
Query: 298 NAVILGLCEINRVLEAFGLCYELVEK 323
N VI GL + EA L E++E+
Sbjct: 614 NPVIQGLFRKRKTTEAINLFREMLEQ 639
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 149/352 (42%), Gaps = 11/352 (3%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M GF PD TFNTL++ C AG++ A+++ + M D +Y+ +I LC+ G
Sbjct: 285 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT- 119
+ +A ++ D++ ++ P +Y + LC+ + +A + R + +G
Sbjct: 345 EVKEAVEVLDQMITRD-------CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
D ++ ++I G C + EL M + PD Y+ LID K K A+
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
L++M S T+++++ + E+ + M + +N I+ L
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 240 HGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL 296
+ A ++++ + +G ++ C+ G + +A ++ N DI
Sbjct: 518 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVT 577
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+I GLC+ RV A L + KG++ N ++ L + K EA
Sbjct: 578 YGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEA 629
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 115/256 (44%), Gaps = 10/256 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+N LI S CS G LDEAL + + M+ +Y+ LI C+ +A
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
E++FDE+ E+ G + +Y + LC+ + A +++ Q++ G + D +
Sbjct: 490 EEIFDEM---EV----HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +++ CR G + +++ M PD+ Y LI G + + +A + L +
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSI--ELLFGHGH 242
++ ++ L K E+ + ML++N +S + + L G G
Sbjct: 603 MKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGP 662
Query: 243 RDKAFEIVELLYKKGF 258
+A + + L +KGF
Sbjct: 663 IREAVDFLVELLEKGF 678
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 147/352 (41%), Gaps = 46/352 (13%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
FSP+ + ++ +G+ D+ K+ E+MK+ + ++++ ILI + Q D+
Sbjct: 79 FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEIL 138
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYM 126
+ D + ++ FG +P Y + L + + E
Sbjct: 139 SVVDWMIDE------FGLKPDTHFYNRMLNLLVDGNSLKLVE------------------ 174
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+ H + + +W ++ PDV ++ LI + + A+ LE M
Sbjct: 175 ---ISHAK---------MSVWGIK----PDVSTFNVLIKALCRAHQLRPAILMLEDMPSY 218
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF-GHGHRDK 245
+P T+ +++ +E+G + R+ M++ + N+S I F G +
Sbjct: 219 GLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWS-NVSVNVIVHGFCKEGRVED 277
Query: 246 AFEIV-ELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
A + E+ + GF +V LCK G + A +++ L+ ++ D+ N+VI
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISK 353
GLC++ V EA + +++ + N L++ L +VEEA +++
Sbjct: 338 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 159/351 (45%), Gaps = 43/351 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PD +NT+I C G +++A+++F+ M+ V AD+ +Y+ L+ LC G + A
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+L ++ ++IV P ++ + + GK +A ++ ++ +R D +
Sbjct: 229 ARLMRDMVMRDIV-------PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I G C G + ++L M+ + LPDV Y+ LI+GF + + + +M
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ + T T+++I+ + G P + + M R N+ T SI LL+G
Sbjct: 342 QRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP-----NIRTYSI-LLYG----- 390
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
LC ++ +A L K+ +DI N VI G+
Sbjct: 391 ------------------------LCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 426
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
C+I V +A+ L L KGL ++ +++ + + +++ + +++
Sbjct: 427 CKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 477
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 160/353 (45%), Gaps = 16/353 (4%)
Query: 23 SAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKF 82
S+ NL+E + +F M + +S ++ + + +YD LF + +C
Sbjct: 46 SSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHM-----EVCGI 100
Query: 83 GSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENG 141
G SY + LC + A V+ ++MK G + D ++ ++I G C+ +
Sbjct: 101 GHD--LYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158
Query: 142 YELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILAR 201
+L+ M F PDV IY+ +IDG + A+E ++M + T++S++A
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 218
Query: 202 LLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVK 261
L G ++AR+ M+ R+I N+ T I++ G +A ++ E + ++ CV
Sbjct: 219 LCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRR--CVD 276
Query: 262 IE-----EVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGL 316
+ ++ LC G++ EA+++L + D+ N +I G C+ RV E L
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 336
Query: 317 CYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENL-DRSVLSY 368
E+ ++GL + N ++ G+ + A I R+ N+ S+L Y
Sbjct: 337 FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLY 389
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 11/151 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G DT T+NT+I + AG D A ++F M + + +YSIL+ LC +KA
Sbjct: 344 GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKA 400
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
LF+ + + EI L +Y + +C+ G A + R + +G + D +S
Sbjct: 401 LVLFENMQKSEIEL-------DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVS 453
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLP 155
Y T+I G CR+ ++ L M LP
Sbjct: 454 YTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 153/340 (45%), Gaps = 15/340 (4%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G D ++T+I S C ++D+AL +F M N + D +YS LI LC G +
Sbjct: 234 GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 293
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP-- 122
A +L ++ E++I P ++ + + GK +AE++ ++++R DP
Sbjct: 294 ASRLLSDMLERKI-------NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI-DPNI 345
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
++Y ++I G C + ++ M+ +D LPDV Y+ LI+GF + K + ME
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M + + T T+ +++ + + V M+ + NI ++ L +G
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 243 RDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLL-FSLKNHHNVDIDLCN 298
+KA + E L K I + + +CK GK+ + L SLK D+ N
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP-DVIAYN 524
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTA 338
+I G C+ EA+ L ++ E G + N L+ A
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 163/380 (42%), Gaps = 42/380 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT TF TL+H EA+ + E M D +Y +I LC+RG+ D A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 66 EKLFDEL----FEKEIV--------LCKF----------------GSQPLAASYKPIFQY 97
L +++ E ++V LCK+ G +P +Y +
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 98 LCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
LC +G+ A R+L +++R + +++ ++I +EG +L M++R P+
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
+ Y+ LI+GF D+ A + M+ LP T+++++ GF V
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI-----NGFCKAKKVVDG 399
Query: 217 MMLDRNIRQ-----NINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKI---EEVVQF 268
M L R++ + N T I F D A + + + G I ++
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459
Query: 269 LCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQE 328
LCK GKL +A + + K+ DI N + G+C+ +V + + L L KG+ +
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD 519
Query: 329 LTCLNDLVTALEARGKVEEA 348
+ N +++ +G EEA
Sbjct: 520 VIAYNTMISGFCKKGLKEEA 539
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 13/242 (5%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T+NTLI+ C A + + +++F +M + ++ +Y+ LI Q D D A+ +
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTV 128
F ++ G P +Y + LC++GK KA V+ + +++ +P Y
Sbjct: 438 FKQMVSD-------GVHPNIMTYNTLLDGLCKNGKLEKA-MVVFEYLQKSKMEPDIYTYN 489
Query: 129 IM--GHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
IM G C+ G E+G++L + + PDV Y+ +I GF +K A KM +
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH-GHRDK 245
LP + T+++++ L G SA + M R+ R + ST + H G DK
Sbjct: 550 GPLPDSGTYNTLIRAHLRDGDKAASAELIKEM--RSCRFAGDASTYGLVTDMLHDGRLDK 607
Query: 246 AF 247
F
Sbjct: 608 GF 609
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 143/350 (40%), Gaps = 11/350 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ P T N+L++ C + EA+ + + M D+ +++ L+ L Q +A
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 189
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L + + K G QP +Y + LC+ G+ A +L ++ K + D +
Sbjct: 190 VALVERMVVK-------GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y TVI C+ ++ L M + PDV Y LI + A L ML
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T++S++ ++G E+ ++ M+ R+I NI I H D
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A +I L+ K V ++ CK K+ + +L + + +I
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
G + + A + ++V G+H + N L+ L GK+E+A +
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 153/369 (41%), Gaps = 12/369 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G S + T+N +I+ C L AL + M + + L+ C +A
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L D++ E G QP ++ + L +H K +A ++ +++ +G Q D ++
Sbjct: 155 VALVDQMVE-------MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 207
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y VI G C+ G + LL M + DV IY +ID + A+ +M
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
P T+ S+++ L G +++R+ ML+R I N+ I+ G
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A ++ + + ++ V ++ C +L EA+++ + D+ N +I
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENL 361
G C+ +V++ L ++ +GL L+ + A + K++ + +
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS-DGV 446
Query: 362 DRSVLSYSS 370
++++Y++
Sbjct: 447 HPNIMTYNT 455
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 142/333 (42%), Gaps = 17/333 (5%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P F+ L+ + D + E M+ V+ + +Y+I+I LC+R A +
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
++ K G P + + C + +A ++ Q+++ G Q D +++ T
Sbjct: 123 LGKMM-------KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTT 175
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G + L+ M+ + PD+ Y +I+G ++ +P LA+ L KM K
Sbjct: 176 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 235
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
+ +++ L + ++ + M ++ IR ++ + I L +G A
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295
Query: 248 EIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
++ + ++ V ++ K GKL EA KL ++ + +I N++I G
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVT 337
C +R+ EA + +V K CL D+VT
Sbjct: 356 CMHDRLDEAQQIFTLMVSK------DCLPDVVT 382
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 136/326 (41%), Gaps = 11/326 (3%)
Query: 27 LDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQP 86
LDEA+ +F M + +S L+ + + +D L EK +L G
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFD----LVISFGEKMEIL---GVSH 98
Query: 87 LAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIM-GHCREGAYENGYELL 145
+Y + LC + A +L ++MK G + + ++ G C L+
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 146 IWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEK 205
M+ + PD + L+ G Q +K A+ +E+M+ P T+ +++ L ++
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218
Query: 206 GFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKI 262
G P + + M I ++ + + I+ L + H D A + + KG
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 263 EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVE 322
++ LC G+ +A +LL L+ N ++ N++I + +++EA L E+++
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 323 KGLHQELTCLNDLVTALEARGKVEEA 348
+ + + N L+ +++EA
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEA 364
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 155/353 (43%), Gaps = 46/353 (13%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD ++NT+I C L++AL++ MK + ++ ILI C+ G D+A
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 69 FDELFEKEIVLCKF-GSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQD-PLSYM 126
E+ KF G + Y + + C+ G+ + + + ++++RG ++Y
Sbjct: 235 LKEM--------KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYN 286
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
T+I G C+ G + E+ +M+ R P+V Y LIDG K A++ L M++
Sbjct: 287 TLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIR-QNINLSTKSIELLFGHGHRDK 245
P T++ I+ +L + G ++ + +M R R NI + +L G
Sbjct: 347 DEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI-----TYNILLGG----- 396
Query: 246 AFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC--NAVILG 303
LC +G L EA KLL LK+ D D+ NA+I G
Sbjct: 397 -----------------------LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHG 433
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIP 356
LC+ NR+ +A + LVEK + N L+ + G V +A + K+I
Sbjct: 434 LCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQIS 486
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 167/354 (47%), Gaps = 14/354 (3%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
MKG G S T+ LI + C AG +DEA+ + MK + AD Y+ LIR C G
Sbjct: 203 MKG-SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
+ D+ + LFDE+ E+ G P A +Y + + C+ G+ ++A + +++RG +
Sbjct: 262 ELDRGKALFDEVLER-------GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
Query: 121 -DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
+ +Y +I G C G + +LL M+ +D P+ Y+ +I+ + A+E
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKS--IELL 237
+E M K P T++ +L L KG E++++ +ML + + ++ + + I L
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434
Query: 238 FGHGHRDKAFEIVELLYKK---GFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDI 294
+A +I +LL +K G V ++ K G + +A +L + +
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494
Query: 295 DLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
D A+I G C+ + A GL ++ L + N L+++L G +++A
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQA 548
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 172/392 (43%), Gaps = 36/392 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SP T+NTLI C G L EA ++FE M V + +Y+ LI LC G +A
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+L + + EK+ +P A +Y I LC+ G A ++ + KR T+ D ++
Sbjct: 337 LQLLNLMIEKD-------EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNIT 389
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFL--PDVEIYDCLIDGFLQKDKPLLAMETLEK 182
Y ++ G C +G + +LL ML+ PDV Y+ LI G ++++ A++ +
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
+++ T + +L L+ G +++ + + D I +N + T I+ G
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509
Query: 243 RDKAFEIVELLYKKGFCVKIEE------------VVQFLCKRGKLPEARKLLLFSLKNHH 290
+ A KG K+ ++ LCK G L +A +L ++++
Sbjct: 510 LNVA---------KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNN 560
Query: 291 NVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA-A 349
D+ N +I G + + A L + GL +L + L+ G ++EA +
Sbjct: 561 FPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAIS 620
Query: 350 FISKRI-PGLE---NLDRSVLSYSSKKSRPNK 377
F K + G E ++ SVL Y + +K
Sbjct: 621 FFDKMVDSGFEPDAHICDSVLKYCISQGETDK 652
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 126/279 (45%), Gaps = 12/279 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD ++N LIH C L +AL +++ + D + +IL+ + + GD +KA +L
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYMT 127
+ ++ + +IV + +Y + C+ G A+ +L ++ Q + Y
Sbjct: 482 WKQISDSKIV-------RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNC 534
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ C+EG+ + + L M R + PDV ++ +IDG L+ A L M ++
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T+ ++ R L+ G+ E+ M+D + ++ ++ G DK
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLT 654
Query: 248 EIVELLYKKGFCVKIE---EVVQFLCK-RGKLPEARKLL 282
E+V+ L K + E V+ ++C + A++LL
Sbjct: 655 ELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLL 693
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 105/253 (41%), Gaps = 4/253 (1%)
Query: 103 KTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYD 161
KT A VL ++KRG + ++ ++ G CR LL M R +PDV Y+
Sbjct: 122 KTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYN 181
Query: 162 CLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDR 221
+I GF + + A+E +M S TW ++ + G E+ M
Sbjct: 182 TVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFM 241
Query: 222 NIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKG---FCVKIEEVVQFLCKRGKLPEA 278
+ ++ + T I G D+ + + + ++G + +++ CK G+L EA
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301
Query: 279 RKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTA 338
++ F ++ ++ +I GLC + + EA L ++EK N ++
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINK 361
Query: 339 LEARGKVEEAAFI 351
L G V +A I
Sbjct: 362 LCKDGLVADAVEI 374
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 119/303 (39%), Gaps = 40/303 (13%)
Query: 48 SYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKA 107
+++IL++ LC+ + KA L E+ ++ P SY + + CE + KA
Sbjct: 144 NHNILLKGLCRNLECGKAVSLLREMRRNSLM-------PDVFSYNTVIRGFCEGKELEKA 196
Query: 108 ERVLRQIMKRGTQDPL-SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDG 166
+ ++ G L ++ +I C+ G + L M D+ +Y LI G
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 167 FLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN 226
F + +++L+ P T+++++ + G E++ + M++R +R N
Sbjct: 257 FCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPN 316
Query: 227 INLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSL 286
+ T ++ LC GK EA +LL +
Sbjct: 317 VYTYTG--------------------------------LIDGLCGVGKTKEALQLLNLMI 344
Query: 287 KNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVE 346
+ + N +I LC+ V +A + + ++ + N L+ L A+G ++
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404
Query: 347 EAA 349
EA+
Sbjct: 405 EAS 407
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 165/356 (46%), Gaps = 12/356 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G PD T+ +LI +C +LD A KVF M + +Y+ LI LC D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
+A LF ++ + E P +Y + + LC + +A +++++ + G + +
Sbjct: 306 EAMDLFVKMKDDECF-------PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 124 -SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y +I C + +E ELL ML + +P+V Y+ LI+G+ ++ A++ +E
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M P T T++ ++ + H++ V ML+R + ++ I+ G+
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 243 RDKAFEIVELLYKKGFCV---KIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNA 299
D A+ ++ L+ +G ++ LCK ++ EA L + N ++ + A
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
+I G C+ +V EA + +++ K N L+ L A GK++EA + +++
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 153/323 (47%), Gaps = 12/323 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+N LI+ +C G +++A+ V E M++ +++ ++ +Y+ LI+ C + + KA
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKA 446
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+ +++ E++++ P +Y + C G A R+L + RG D +
Sbjct: 447 MGVLNKMLERKVL-------PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I C+ E +L + ++ P+V +Y LIDG+ + K A LEKML
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ LP + T+++++ L G E+ + M+ ++ ++ T I L G D
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFL---CKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
A+ + + G F+ C+ G+L +A ++ +N + D+ +++I
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 302 LGLCEINRVLEAFGLCYELVEKG 324
G ++ + AF + + + G
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTG 702
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 162/402 (40%), Gaps = 67/402 (16%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T+ ++I S C + ++EA +F++++ V + Y+ LI C+ G D
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 64 KAEKLFDELFEKEIV------------LC----------------KFGSQPLAASYKPIF 95
+A + +++ K + LC K G QP ++ +
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Query: 96 QYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
L + G A +Q++ GT+ D +Y T I +CREG + +++ M
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS 669
Query: 155 PDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLE------KGFP 208
PD+ Y LI G+ + A + L++M + P T+ S++ LLE KG
Sbjct: 670 PDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSE 729
Query: 209 HESARVTVMM--------LDRNIRQNINLSTKSIELL----------------FGHGHRD 244
E ++ MM L++ + ++ + KS E L F H R+
Sbjct: 730 PELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRN 789
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
+ EL++ ++ CK K EA K++ + H ++ C +I GL
Sbjct: 790 EGISPSELVFNA--------LLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGL 841
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVE 346
+ + L++ G +++ ++ + +G VE
Sbjct: 842 YKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVE 883
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENM-KNFQVTADSASYSILIRNLCQRGDYDKAE 66
+P+ ++ LI C GNL A KVF++M +N ++ ++ L+ C+ +++A
Sbjct: 757 TPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAA 816
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSY 125
K+ D++ +C G P S K + L + G+ + V + +++ G +D L++
Sbjct: 817 KVVDDM------IC-VGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAW 869
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDG 166
+I G ++G E YEL M + + Y LI+G
Sbjct: 870 KIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 162/386 (41%), Gaps = 40/386 (10%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT TF TLIH EA+ + + M D +Y ++ LC+RGD D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 66 EKLFDEL----FEKEIV--------LCKF----------------GSQPLAASYKPIFQY 97
L ++ E ++V LCK+ G +P +Y +
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 98 LCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
LC +G+ A R+L +++R + +++ +I +EG +L M++R PD
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
+ Y LI+GF D+ A E M+ P T+ +++ + E +
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE-------VVQFL 269
M R + N T I F D A ++++K+ V + ++ L
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNA----QMVFKQMVSVGVHPNILTYNILLDGL 478
Query: 270 CKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQEL 329
CK GKL +A + + ++ DI N +I G+C+ +V + + L L KG+ +
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV 538
Query: 330 TCLNDLVTALEARGKVEEAAFISKRI 355
N +++ +G EEA + K++
Sbjct: 539 IAYNTMISGFCRKGSKEEADSLLKKM 564
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 162/393 (41%), Gaps = 33/393 (8%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P FN L+ + + + + E M+ ++ D +YSI I C+R A +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 69 FDEL----FEKEIV------------------------LCKFGSQPLAASYKPIFQYLCE 100
++ +E +IV + + G +P ++ + L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 101 HGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEI 159
H K +A ++ Q+++RG Q D ++Y TV+ G C+ G + LL M + DV I
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 160 YDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMML 219
Y+ +IDG + A+ +M P T+ S+++ L G +++R+ M+
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 220 DRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLP 276
+R I N+ + I+ G +A ++ + + K+ I ++ C +L
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 277 EARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLV 336
EA+ + + ++ + +I G C+ RV E L E+ ++GL L+
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 337 TALEARGKVEEAAFISKRIPGLENLDRSVLSYS 369
+ A + K++ + + ++L+Y+
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSV-GVHPNILTYN 472
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 8/190 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +T T+ TLIH A + D A VF+ M + V + +Y+IL+ LC+ G KA
Sbjct: 428 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+F+ L + +P +Y + + +C+ GK + + +G + + ++
Sbjct: 488 MVVFEYLQRSTM-------EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G CR+G+ E LL M LP+ Y+ LI L+ + E +++M
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600
Query: 185 KSSYLPKTST 194
+ ST
Sbjct: 601 SCGFAGDAST 610
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 107/251 (42%), Gaps = 8/251 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T+++LI+ C LDEA +FE M + + +YS LI+ C+ ++ +L
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
F E+ ++ +V G+ +Y + + A+ V +Q++ G + L+Y
Sbjct: 421 FREMSQRGLV----GN---TVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G C+ G + ++ R PD+ Y+ +I+G + K E +
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P ++++++ KG E+ + M + N I G R+ +
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA 593
Query: 248 EIVELLYKKGF 258
E+++ + GF
Sbjct: 594 ELIKEMRSCGF 604
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 112/275 (40%), Gaps = 39/275 (14%)
Query: 82 FGSQPLAASYKPIFQY---LCEHGKTRKAERVL---RQIMKRG-TQDPLSYMTVIMGHCR 134
FG + + I ++ L K K E V+ Q+ G + D +Y I CR
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCR 130
Query: 135 EGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTST 194
+L M++ + PD+ L++G+ + A+ +++M++ Y P T T
Sbjct: 131 RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 195 WHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLY 254
+ +++ L F H A V ++D+ +++ L +G
Sbjct: 191 FTTLIHGL----FLHNKASEAVALVDQMVQRGCQPD------LVTYG------------- 227
Query: 255 KKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAF 314
VV LCKRG + A LL K D+ + N +I GLC+ + +A
Sbjct: 228 ---------TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDAL 278
Query: 315 GLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
L E+ KG+ ++ + L++ L G+ +A+
Sbjct: 279 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 158/357 (44%), Gaps = 14/357 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD + T+I S C G+++ AL +F+ M+N+ + D Y+ L+ LC G + A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+ L + +++I +P ++ + + GK AE + ++++ + +
Sbjct: 232 DSLLRGMTKRKI-------KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFT 284
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I G C EG + ++ M + PDV Y LI+GF + K AM+ +M
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ T T+ +++ + G P+ + V M+ R + NI + L +G
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 245 KAFEIVELLYKK---GFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
KA I E + K+ G I ++ LC GKL +A + K ++ I
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYT 464
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
+I G+C+ +V A L L KG+ + +++ L G EA + +++
Sbjct: 465 IIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/358 (18%), Positives = 136/358 (37%), Gaps = 24/358 (6%)
Query: 12 CTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDE 71
C + ++ + + +EAL +F +M + ++ L+ + + +D L D
Sbjct: 38 CNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDH 97
Query: 72 L----FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
L ++ C + C+ + A L ++MK G + D +++
Sbjct: 98 LQIMGVSHDLYTCNL-----------LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFT 146
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
++I G C E ++ M+ PDV +Y +ID + A+ ++M
Sbjct: 147 SLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENY 206
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P + S++ L G ++ + M R I+ ++ I+ G A
Sbjct: 207 GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDA 266
Query: 247 FEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
E+ + + I ++ C G + EAR++ D+ ++I G
Sbjct: 267 EELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLING 326
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGK--VEEAAF---ISKRIP 356
C+ +V +A + YE+ +KGL L+ GK V + F +S+ +P
Sbjct: 327 FCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P+ T+N L+H C G L++AL VFE+M+ ++ +Y+I+I+ +C+ G A
Sbjct: 420 GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNA 479
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
LF L K G +P +Y + L G +A + R++ + G
Sbjct: 480 VNLFCSLPSK-------GVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 158/344 (45%), Gaps = 14/344 (4%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SP+ T++T I + C +G L ALK F +MK ++ + +++ LI C+ GD + A
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVL-RQIMKRGTQDPLSYM 126
L+ E+ + L +Y + C+ G+ ++AE + R + R + L Y
Sbjct: 220 LYKEMRRVRMSLN-------VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYT 272
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
T+I G + G +N + L ML + D+ Y +I G K A E +E M KS
Sbjct: 273 TIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKS 332
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
+P + +++ + G + + +++R ++ + I+ + +G +A
Sbjct: 333 DLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA 392
Query: 247 FEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDID--LCNAVILGL 304
IV +K V ++ LCK G E + LFS + + D + + I GL
Sbjct: 393 --IVYFCIEKANDVMYTVLIDALCKEGDFIEVER--LFSKISEAGLVPDKFMYTSWIAGL 448
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
C+ +++AF L +V++GL +L L+ L ++G + EA
Sbjct: 449 CKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEA 492
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 151/346 (43%), Gaps = 7/346 (2%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G++P +FN+++ C G + A + +M F D SY+ LI C+ GD A
Sbjct: 51 GYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA 110
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
+ + L +CK P S+ +F + + + ++K + + ++Y
Sbjct: 111 SLVLESLRASHGFICK----PDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTY 166
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
T I C+ G + + M R P+V + CLIDG+ + +A+ ++M +
Sbjct: 167 STWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRR 226
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
T+ +++ +KG + + M++ + N + T I+ F G D
Sbjct: 227 VRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDN 286
Query: 246 AFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
A + + + +G + I ++ LC GKL EA +++ K+ D+ + ++
Sbjct: 287 AMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMN 346
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+ R+ A + ++L+E+G ++ L+ ++ + G++ EA
Sbjct: 347 AYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA 392
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/287 (16%), Positives = 111/287 (38%), Gaps = 38/287 (13%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P++ + T+I G+ D A+K M N + D +Y ++I LC G +A ++
Sbjct: 266 PNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEI 325
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-------- 120
+++ + ++V P + + + G+ + A + ++++RG +
Sbjct: 326 VEDMEKSDLV-------PDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALST 378
Query: 121 -----------------------DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDV 157
+ + Y +I C+EG + L + +PD
Sbjct: 379 MIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDK 438
Query: 158 EIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVM 217
+Y I G ++ + A + +M++ L + +++ L KG E+ +V
Sbjct: 439 FMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDE 498
Query: 218 MLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE 264
ML+ I + + I G+ A +++ + ++G + +
Sbjct: 499 MLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVSD 545
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 163/375 (43%), Gaps = 42/375 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTA----DSASYSILIRNLCQRGD 61
G PD TFN+ I + C G + +A ++F +M+ + +S +Y+++++ C+ G
Sbjct: 247 GLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGL 306
Query: 62 YDKAEKLFDELFEKEIVLCKFGSQPLAA--SYKPIFQYLCEHGKTRKAERVLRQIMKRGT 119
+ A+ LF+ + E + LA+ SY Q L HGK +AE VL+Q+ +G
Sbjct: 307 LEDAKTLFESIREND---------DLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGI 357
Query: 120 QDPL-SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME 178
+ SY ++ G C+ G + ++ M R PD Y CL+ G+ K A
Sbjct: 358 GPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKS 417
Query: 179 TLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
L++M++++ LP T + +L L + G E+ + M ++ + ++ L
Sbjct: 418 LLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLC 477
Query: 239 GHGHRDKAFEIVELLYKKGFC--------------------------VKIEEVVQFLCKR 272
G G DKA EIV+ + G + ++ LCK
Sbjct: 478 GSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKA 537
Query: 273 GKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCL 332
G+ EA+ L + D N I C+ ++ AF + ++ +KG H+ L
Sbjct: 538 GRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETY 597
Query: 333 NDLVTALEARGKVEE 347
N L+ L + ++ E
Sbjct: 598 NSLILGLGIKNQIFE 612
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 166/375 (44%), Gaps = 20/375 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P T TFN LI + C + +D A ++F+ M + ++ IL+R C+ G DK
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+L + + FG P Y I C G+ +E+++ ++ + G D ++
Sbjct: 202 LELLN-------AMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVT 254
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFL----PDVEIYDCLIDGFLQKDKPLLAMETL 180
+ + I C+EG + + M ++L P+ Y+ ++ GF + A
Sbjct: 255 FNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLF 314
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
E + ++ L +++ L L+ G E+ V M D+ I +I ++ L
Sbjct: 315 ESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKL 374
Query: 241 GHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
G A IV L+ + G C V ++ C GK+ A+ LL ++N+ + C
Sbjct: 375 GMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTC 434
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISK--RI 355
N ++ L ++ R+ EA L ++ EKG + N +V L G++++A I K R+
Sbjct: 435 NILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRV 494
Query: 356 PG---LENLDRSVLS 367
G L NL S +
Sbjct: 495 HGSAALGNLGNSYIG 509
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 155/352 (44%), Gaps = 23/352 (6%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P +N L+ S ++ ++++M + + ++++LIR LC D A +L
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYMT 127
FDE+ EK G +P ++ + + C+ G T K +L + G + + Y T
Sbjct: 170 FDEMPEK-------GCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNT 222
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ CREG ++ +++ M +PD+ ++ I ++ K L A M
Sbjct: 223 IVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDE 282
Query: 188 Y--LPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKS-----IELLFGH 240
Y LP+ +SI L+ KGF L +IR+N +L++ ++ L H
Sbjct: 283 YLGLPRP---NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRH 339
Query: 241 GHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
G +A +++ + KG I ++ LCK G L +A+ ++ +N D
Sbjct: 340 GKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTY 399
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKG-LHQELTCLNDLVTALEARGKVEEA 348
++ G C + +V A L E++ L TC N L+ +L G++ EA
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTC-NILLHSLWKMGRISEA 450
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 153/368 (41%), Gaps = 23/368 (6%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ T N L+HS G + EA ++ M D+ + +I++ LC G+ DKA ++
Sbjct: 429 PNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEI 488
Query: 69 FDEL-FEKEIVLCKFGSQ---------------PLAASYKPIFQYLCEHGKTRKAERVLR 112
+ L G+ P +Y + LC+ G+ +A+ +
Sbjct: 489 VKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFA 548
Query: 113 QIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKD 171
++M Q D ++Y I C++G + + +L M ++ +E Y+ LI G K+
Sbjct: 549 EMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKN 608
Query: 172 KPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLST 231
+ +++M + P T+++ + L E ++ + M+ +NI N+
Sbjct: 609 QIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFK 668
Query: 232 KSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQF----LCKRGKLPEARKLLLFSLK 287
IE D A E+ E C + E + L G+L +A +LL L
Sbjct: 669 YLIEAFCKVPDFDMAQEVFETAVS--ICGQKEGLYSLMFNELLAAGQLLKATELLEAVLD 726
Query: 288 NHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEE 347
+ L ++ LC+ + + A G+ ++++++G + L ++ L G +E
Sbjct: 727 RGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKE 786
Query: 348 AAFISKRI 355
A + ++
Sbjct: 787 ANSFADKM 794
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 129/315 (40%), Gaps = 41/315 (13%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T++TL++ C AG EA +F M ++ DS +Y+I I + C++G A ++
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYMT 127
++ +K G +Y + L + + ++ ++ ++G + +Y T
Sbjct: 582 LKDMEKK-------GCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNT 634
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
I C E+ LL M++++ P+V + LI+ F + +A E E + S
Sbjct: 635 AIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAV-SI 693
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
K + + LL G ++ + +LDR F
Sbjct: 694 CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDR------------------------GF 729
Query: 248 EIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEI 307
E+ LYK ++V+ LCK+ +L A +L + + D VI GL ++
Sbjct: 730 ELGTFLYK--------DLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKM 781
Query: 308 NRVLEAFGLCYELVE 322
EA +++E
Sbjct: 782 GNKKEANSFADKMME 796
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SP+ CT+NT I C +++A + + M + + S+ LI C+ D+D A
Sbjct: 624 GISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMA 683
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ E+FE + +C G + Y +F L G+ KA +L ++ RG +
Sbjct: 684 Q----EVFETAVSIC--GQK--EGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFL 735
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGF 167
Y ++ C++ E +L M+ R + D +IDG
Sbjct: 736 YKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGL 778
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 148/334 (44%), Gaps = 11/334 (3%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
FSP ++L+ G ++EAL + + + +F V+ + Y+ LI +LC+ + +AE
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAE 387
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSY 125
LFD + K G +P +Y + C GK A L +++ G + Y
Sbjct: 388 LLFDRM-------GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY 440
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
++I GHC+ G + M+ + P V Y L+ G+ K K A+ +M
Sbjct: 441 NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
P T+ ++L+ L G ++ ++ M + N++ N IE G K
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 560
Query: 246 AFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
AFE ++ + +KG ++ LC G+ EA+ + K + ++ ++
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLV 336
G C ++ EA +C E+V++G+ +L C L+
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 160/383 (41%), Gaps = 46/383 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P TF TL+ AG + +A+K+F M + V + +Y+++I C+ GD KA
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ E+ EK IV P SY+P+ LC G+ +A+ + + K + + +
Sbjct: 562 FEFLKEMTEKGIV-------PDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC 614
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQ-KDKPLL-------- 175
Y ++ G CREG E + M++R D+ Y LIDG L+ KD+ L
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 176 --------------------------AMETLEKMLKSSYLPKTSTWHSILARLLEKGFPH 209
A + M+ +P T+ +++ L + GF +
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 210 ESARVTVMMLDRNIRQNINLSTKSIELLF-GHGHRDKAFEIVELLYKK--GFCVKIEEVV 266
E+ + M + N +++L G KA E+ + K ++
Sbjct: 735 EAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLI 794
Query: 267 QFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLH 326
+ C++G++ EA +L+ + + + D +I LC N V +A L + EKG+
Sbjct: 795 RGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 854
Query: 327 QELTCLNDLVTALEARGKVEEAA 349
+ N L+ G++ +A
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKAT 877
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 162/397 (40%), Gaps = 38/397 (9%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G SP+ +N LI S C EA +F+ M + + +YSILI C+RG D
Sbjct: 360 DFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLD 419
Query: 64 KAEKLFDELFEKEIVL------------CKFGS----------------QPLAASYKPIF 95
A E+ + + L CKFG +P +Y +
Sbjct: 420 TALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLM 479
Query: 96 QYLCEHGKTRKAERVLRQIMKRGTQDPL-SYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
C GK KA R+ ++ +G + ++ T++ G R G + +L M +
Sbjct: 480 GGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVK 539
Query: 155 PDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARV 214
P+ Y+ +I+G+ ++ A E L++M + +P T ++ ++ L G E A+V
Sbjct: 540 PNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE-AKV 598
Query: 215 TVMMLDR-NIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRG 273
V L + N N T + G ++A + + + ++G V ++ V + G
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG--VDLDLVCYGVLIDG 656
Query: 274 KLP-EARKLLLFSLKNHHN----VDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQE 328
L + RKL LK H+ D + ++I + EAFG+ ++ +G
Sbjct: 657 SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716
Query: 329 LTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSV 365
++ L G V EA + ++ + ++ V
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQV 753
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/345 (19%), Positives = 147/345 (42%), Gaps = 11/345 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ T + L+H + A+++F +M + + D Y+ +IR+LC+ D +A+++
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
+ E C P Y + LC+ K +A + + + + + D ++Y T
Sbjct: 250 IAHM---EATGCDVNIVP----YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G C+ +E G E++ ML F P L++G ++ K A+ +++++
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P +++++ L + HE+ + M +R N + I++ G D A
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 248 EIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
+ + G + + ++ CK G + A + + + +++ G
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
C ++ +A L +E+ KG+ + L++ L G + +A
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 16/201 (7%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD + ++I + G+ EA +++ M N + +Y+ +I LC+ G +
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 64 KAEKLFDELFEKEIVLCK----FGSQPLAASYKPIFQYLCE-HGKTRKAERVLRQIMKRG 118
+AE VLC S P +Y L + +KA + I+K
Sbjct: 735 EAE-----------VLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGL 783
Query: 119 TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME 178
+ +Y +I G CR+G E EL+ M+ PD Y +I+ +++ A+E
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIE 843
Query: 179 TLEKMLKSSYLPKTSTWHSIL 199
M + P +++++
Sbjct: 844 LWNSMTEKGIRPDRVAYNTLI 864
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +T T+N LI C G ++EA ++ M V+ D +Y+ +I LC+R D KA
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKA 841
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
+L++ + EK G +P +Y + C G+ KA + +++++G
Sbjct: 842 IELWNSMTEK-------GIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 105/272 (38%), Gaps = 11/272 (4%)
Query: 14 FNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELF 73
+ L+H C G L+EAL V + M V D Y +LI + D L E+
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 74 EKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGH 132
++ G +P Y + + G ++A + ++ G + ++Y VI G
Sbjct: 675 DR-------GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727
Query: 133 CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKT 192
C+ G L M +P+ Y C +D + + + L + L T
Sbjct: 728 CKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANT 787
Query: 193 STWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVEL 252
+T++ ++ +G E++ + M+ + + T I L KA E+
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 253 LYKKGF---CVKIEEVVQFLCKRGKLPEARKL 281
+ +KG V ++ C G++ +A +L
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATEL 879
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 165/382 (43%), Gaps = 42/382 (10%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G +P+ TF TLI+ C G +D A +F+ M+ + D +YS LI + G
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLG 338
Query: 64 KAEKLFDELFEKEI-----------------------------VLCKFGSQPLAASYKPI 94
KLF + K + +LC+ G P +Y +
Sbjct: 339 MGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ-GISPNVVTYTIL 397
Query: 95 FQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYMTVIMGHCREGAYENGYELLIWMLRRDF 153
+ LC+ G+ +A + QI+KRG + + +Y ++I G C+ G +G+ L M++ +
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 154 LPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESAR 213
PDV IY L+DG ++ L AM KML S ++S++ E+ +
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 214 VTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKG-------FCVKIEEVV 266
V +M I+ ++ T + + G ++A + ++K G +C I+
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA-- 575
Query: 267 QFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLH 326
CK K +L +N + DI +CN VI L + +R+ +A L+E +
Sbjct: 576 --FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 633
Query: 327 QELTCLNDLVTALEARGKVEEA 348
++ N ++ + +++EA
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEA 655
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 8/188 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+G PD T+NT+I +CS LDEA ++FE +K ++ + +ILI LC+ D D
Sbjct: 629 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 688
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
A ++F + EK GS+P A +Y + + + + ++ ++ ++G +
Sbjct: 689 GAIRMFSIMAEK-------GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSI 741
Query: 124 -SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
SY +I G C+ G + + + LPDV Y LI G+ + + + A E
Sbjct: 742 VSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEH 801
Query: 183 MLKSSYLP 190
ML++ P
Sbjct: 802 MLRNGVKP 809
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 143/324 (44%), Gaps = 32/324 (9%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
+ FN+LI C DEALKVF M + + D A+++ ++R G ++A LF
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVI 129
+F K G +P A +Y + C+H K ++ + + ++ V+
Sbjct: 555 FRMF-------KMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVV 607
Query: 130 MG---HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+ C E+ + ++ PD+ Y+ +I G+ + A E + +
Sbjct: 608 IHLLFKCHR--IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVT 665
Query: 187 SYLPKTSTWHSILARLLEKGFPHESA-RVTVMMLDRNIRQN-------INLSTKSIELLF 238
+ P T T +IL +L K + A R+ +M ++ + N ++ +KS+++
Sbjct: 666 PFGPNTVTL-TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI-- 722
Query: 239 GHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDID 295
+ +F++ E + +KG I ++ LCKRG++ EA + ++ D+
Sbjct: 723 -----EGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVV 777
Query: 296 LCNAVILGLCEINRVLEAFGLCYE 319
+I G C++ R++EA L YE
Sbjct: 778 AYAILIRGYCKVGRLVEA-ALLYE 800
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 143/356 (40%), Gaps = 23/356 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P T+++LI C GNL ++E+M D Y +L+ L ++G A
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ ++ + I L + + C + +A +V R + G + D +
Sbjct: 481 MRFSVKMLGQSIRLN-------VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ TV+ EG E L M + PD Y LID F + KP + ++ + M
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQ 593
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
++ + + ++ L + ++++ +++ + +I I D
Sbjct: 594 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLD 653
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A I ELL F V + ++ LCK + A ++ FS+ NAV
Sbjct: 654 EAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM--FSIMAEKGSK---PNAVT 708
Query: 302 LGLCEIN------RVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
G C ++ + +F L E+ EKG+ + + ++ L RG+V+EA I
Sbjct: 709 YG-CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 763
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 99/257 (38%), Gaps = 31/257 (12%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
+ G G PD TF T++ G L+EAL +F M + D+ +Y LI C+
Sbjct: 521 LMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHM 580
Query: 61 DYDKAEKLFDEL----FEKEIVLC-----------------KFGS-------QPLAASYK 92
+LFD + +I +C KF + +P +Y
Sbjct: 581 KPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYN 640
Query: 93 PIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGH--CREGAYENGYELLIWMLR 150
+ C + +AER+ +++K P + I+ H C+ + + M
Sbjct: 641 TMICGYCSLRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 699
Query: 151 RDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHE 210
+ P+ Y CL+D F + + + E+M + P ++ I+ L ++G E
Sbjct: 700 KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDE 759
Query: 211 SARVTVMMLDRNIRQNI 227
+ + +D + ++
Sbjct: 760 ATNIFHQAIDAKLLPDV 776
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 158/374 (42%), Gaps = 32/374 (8%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
+ P+T TFNTLIH EA+ + + M D +Y ++ LC+RGD D A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 67 KLFDEL----FEKEIV--------LCKF----------------GSQPLAASYKPIFQYL 98
L ++ E ++V LC + G +P +Y + + L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 99 CEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDV 157
C +G+ A R+L +++R + +++ +I +EG +L M++R PD+
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 158 EIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVM 217
Y LI+GF D+ A E M+ P T+++++ + E +
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 218 MLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGK 274
M R + N I+ LF G D A +I + + G + ++ LCK GK
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 275 LPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLND 334
L +A + + K+ DI N +I G+C+ +V + + L L KG+ +
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 335 LVTALEARGKVEEA 348
+++ +G EEA
Sbjct: 541 MISGFCRKGLKEEA 554
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 152/339 (44%), Gaps = 13/339 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G D + T+I + C+ N+++AL +F M N + + +Y+ LIR LC G +
Sbjct: 249 GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 308
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPL 123
A +L ++ E++I P ++ + + GK +AE++ +++KR D
Sbjct: 309 ASRLLSDMIERKI-------NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y ++I G C + + M+ +D P+V Y+ LI GF + + ME +M
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ + T T+++++ L + G + ++ M+ + +I + ++ L +G
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 244 DKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLL-FSLKNHHNVDIDLCNA 299
+KA + E L K I +++ +CK GK+ + L SLK ++ +
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP-NVIIYTT 540
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTA 338
+I G C EA L E+ E G N L+ A
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 8/207 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ T+NTLI C A ++E +++F M + ++ +Y+ LI+ L Q GD D A+K+
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
F ++ G P +Y + LC++GK KA V + K + D +Y
Sbjct: 453 FKKMVSD-------GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G C+ G E+G++L + + P+V IY +I GF +K A +M +
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Query: 188 YLPKTSTWHSILARLLEKGFPHESARV 214
LP + T+++++ L G SA +
Sbjct: 566 TLPNSGTYNTLIRARLRDGDKAASAEL 592
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 152/367 (41%), Gaps = 12/367 (3%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
S D ++N LI+ C L AL V M D + S L+ C +A
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSY 125
L D++F E QP ++ + L H K +A ++ +++ RG Q D +Y
Sbjct: 171 ALVDQMFVMEY-------QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY 223
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
TV+ G C+ G + LL M + DV IY +ID A+ +M
Sbjct: 224 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN 283
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
P T++S++ L G +++R+ M++R I N+ + I+ G +
Sbjct: 284 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 246 AFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
A ++ + + K+ I ++ C +L EA+ + + ++ N +I
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLD 362
G C+ RV E L E+ ++GL N L+ L G + A I K++ + +
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS-DGVP 462
Query: 363 RSVLSYS 369
+++YS
Sbjct: 463 PDIITYS 469
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 12/207 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +T T+NTLI AG+ D A K+F+ M + V D +YSIL+ LC+ G +KA
Sbjct: 425 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+F+ L + ++ +P +Y + + +C+ GK + + +G + + +
Sbjct: 485 LVVFEYLQKSKM-------EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 537
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G CR+G E L M LP+ Y+ LI L+ + E +++M
Sbjct: 538 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 597
Query: 185 KSSYLPKTSTWHSILARL----LEKGF 207
++ ST ++ L LEK +
Sbjct: 598 SCGFVGDASTISMVINMLHDGRLEKSY 624
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 120/311 (38%), Gaps = 49/311 (15%)
Query: 46 SASYSI---LIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHG 102
+ASY L RN+ D A LF E+ + S+PL S + L
Sbjct: 42 AASYDYREKLSRNVLLDLKLDDAVDLFGEMVQ---------SRPLP-SIVEFNKLLSAIA 91
Query: 103 KTRKAERVL----RQIMKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVE 158
K K + V+ R R + D SY +I CR +L M++ + PD+
Sbjct: 92 KMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIV 151
Query: 159 IYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMM 218
L++G+ + A+ +++M Y P T T+++++ L F H A V +
Sbjct: 152 TLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL----FLHNKASEAVAL 207
Query: 219 LDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEA 278
+DR + + LF +G VV LCKRG + A
Sbjct: 208 IDRMVARGCQPD------LFTYG----------------------TVVNGLCKRGDIDLA 239
Query: 279 RKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTA 338
LL K D+ + +I LC V +A L E+ KG+ + N L+
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 339 LEARGKVEEAA 349
L G+ +A+
Sbjct: 300 LCNYGRWSDAS 310
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 157/351 (44%), Gaps = 22/351 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+N +I +C AG ++ AL V + M V+ D +Y+ ++R+LC G +A
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQA 223
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
++ D + +++ P +Y + + C A ++L ++ RG T D ++
Sbjct: 224 MEVLDRMLQRDCY-------PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 276
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ G C+EG + + L M P+V ++ ++ + + A + L ML
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG---HG 241
+ + P T++ ++ L KG + + M + N S LL G
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN---SLSYNPLLHGFCKEK 393
Query: 242 HRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLL-LFSLKNHHNVDIDLC 297
D+A E +E + +G V ++ LCK GK+ +A ++L S K V I
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY- 452
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
N VI GL + + +A L E+ K L + + LV L GKV+EA
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 148/329 (44%), Gaps = 11/329 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G +PD T+N L++ C G LDEA+K +M + + +++I++R++C G +
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
AEKL ++ K G P ++ + +LC G +A +L ++ + G Q +
Sbjct: 327 DAEKLLADMLRK-------GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
LSY ++ G C+E + E L M+ R PD+ Y+ ++ + K A+E L +
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
+ P T+++++ L + G ++ ++ M ++++ + + + L G
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 243 RDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNA 299
D+A + + G V ++ LCK + A L+F + +
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQE 328
+I GL EA L EL KGL ++
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGLMKK 588
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 159/369 (43%), Gaps = 15/369 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TLI C G +A K+ E ++ D +Y+++I C+ G+ + A
Sbjct: 132 GNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
+ D + P +Y I + LC+ GK ++A VL ++++R D ++
Sbjct: 192 LSVLD----------RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVIT 241
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I CR+ + +LL M R PDV Y+ L++G ++ + A++ L M
Sbjct: 242 YTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMP 301
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
S P T + IL + G ++ ++ ML + ++ I L G
Sbjct: 302 SSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLG 361
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A +I+E + + G + ++ CK K+ A + L + DI N ++
Sbjct: 362 RAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTML 421
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENL 361
LC+ +V +A + +L KG L N ++ L GK +A + + ++L
Sbjct: 422 TALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA-KDL 480
Query: 362 DRSVLSYSS 370
++YSS
Sbjct: 481 KPDTITYSS 489
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 153/344 (44%), Gaps = 11/344 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T+ LI + C + A+K+ + M++ T D +Y++L+ +C+ G D+A K
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTV 128
+++ G QP ++ I + +C G+ AE++L ++++G + +
Sbjct: 297 LNDMPSS-------GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 129 IMGH-CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ CR+G ++L M + P+ Y+ L+ GF ++ K A+E LE+M+
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T++++L L + G ++ + + + + I+ L G KA
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 248 EIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
++++ + K + +V L + GK+ EA K + + N+++LGL
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
C+ + A ++ +G T L+ L G +EA
Sbjct: 530 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 155/359 (43%), Gaps = 19/359 (5%)
Query: 3 GDGGFSPDTCTF-------NTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRN 55
G+G +S +F N + G L+E K ENM D + LIR
Sbjct: 87 GNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRG 146
Query: 56 LCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM 115
C+ G KA K+ + +L G+ P +Y + C+ G+ A VL ++
Sbjct: 147 FCRLGKTRKAAKILE-------ILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS 199
Query: 116 KRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLL 175
+ D ++Y T++ C G + E+L ML+RD PDV Y LI+ +
Sbjct: 200 V--SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 176 AMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIE 235
AM+ L++M P T++ ++ + ++G E+ + M + N+ +
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 236 LLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNV 292
+ G A +++ + +KGF V ++ FLC++G L A +L ++
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 293 DIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
+ N ++ G C+ ++ A +V +G + ++ N ++TAL GKVE+A I
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 92/190 (48%), Gaps = 8/190 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+NT++ + C G +++A+++ + + + +Y+ +I L + G KA
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
KL DE+ K++ +P +Y + L GK +A + + + G + + ++
Sbjct: 469 IKLLDEMRAKDL-------KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVT 521
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ ++++G C+ + + L++M+ R P+ Y LI+G + A+E L ++
Sbjct: 522 FNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELC 581
Query: 185 KSSYLPKTST 194
+ K+S
Sbjct: 582 NKGLMKKSSA 591
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 124/253 (49%), Gaps = 10/253 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD+ T LI HC GNL A+++F+ MK ++ D +Y+ L+ + GD D A+++
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYM-T 127
+ ++ KEI+ P SY + LC G +A RV +++ + + + +
Sbjct: 538 WADMVSKEIL-------PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML--K 185
+I G+CR G +G L M+ F+PD Y+ LI GF++++ A ++KM +
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
+P T++SIL + E+ V M++R + + + T I + +
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710
Query: 246 AFEIVELLYKKGF 258
AF I + + ++GF
Sbjct: 711 AFRIHDEMLQRGF 723
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 158/346 (45%), Gaps = 13/346 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD F++++ +GNLD+AL F ++K + D+ Y+ILI+ C++G A L
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYMT 127
+E+ ++ G +Y I LC+ +A+++ ++ +R D +
Sbjct: 433 RNEMLQQ-------GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I GHC+ G +N EL M + DV Y+ L+DGF + A E M+
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
LP ++ ++ L KG E+ RV M+ +NI+ + + I+ G+
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 248 EIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNV--DIDLCNAVIL 302
+E + +GF C+ ++ + + +A L+ + + D+ N+++
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
G C N++ EA + +++E+G++ + + ++ ++ + EA
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEA 711
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 158/352 (44%), Gaps = 14/352 (3%)
Query: 4 DGGFS---PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
D FS + F+ LI ++ A L EA + F +++ T + + LI +L + G
Sbjct: 155 DSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIG 214
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT- 119
+ A ++ E+ + + + + + LC+ GK K L Q+ ++G
Sbjct: 215 WVELAWGVYQEISRSGVGINVY-------TLNIMVNALCKDGKMEKVGTFLSQVQEKGVY 267
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
D ++Y T+I + +G E +EL+ M + F P V Y+ +I+G + K A E
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
+ML+S P ++T+ S+L +KG E+ +V M R++ ++ + + L
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 240 HGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL 296
G+ DKA + + G V ++Q C++G + A L L+ +D+
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
N ++ GLC+ + EA L E+ E+ L + L L+ G ++ A
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNA 499
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 157/389 (40%), Gaps = 46/389 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+NTLI ++ S G ++EA ++ M + +Y+ +I LC+ G Y++A
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+++F E+ G P + +Y+ + C+ G + E+V + R D +
Sbjct: 325 KEVFAEMLRS-------GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVC 377
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ +++ R G + + +PD IY LI G+ +K +AM +ML
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDR--------------------NIR 224
+ T+++IL L ++ E+ ++ M +R N++
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 497
Query: 225 QNINLSTKSIE------------LLFGHGHR---DKAFEIVELLYKKGFC---VKIEEVV 266
+ L K E LL G G D A EI + K + +V
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Query: 267 QFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLH 326
LC +G L EA ++ + + + +CN++I G C + +++ +G
Sbjct: 558 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Query: 327 QELTCLNDLVTALEARGKVEEAAFISKRI 355
+ N L+ + +A + K++
Sbjct: 618 PDCISYNTLIYGFVREENMSKAFGLVKKM 646
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 88/219 (40%), Gaps = 45/219 (20%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D T+NTL+ G++D A +++ +M + ++ SYSIL+ LC +G +A +++
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVW 573
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG----------- 118
DE+ K I +P + + C G E L +++ G
Sbjct: 574 DEMISKNI-------KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTL 626
Query: 119 ---------------------------TQDPLSYMTVIMGHCREGAYENGYELLIWMLRR 151
D +Y +++ G CR+ + +L M+ R
Sbjct: 627 IYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIER 686
Query: 152 DFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLP 190
PD Y C+I+GF+ +D A ++ML+ + P
Sbjct: 687 GVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 153/347 (44%), Gaps = 11/347 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SPD F T I++ C G ++EA+K+F M+ V + +++ +I L G YD+A
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+++ E+ G +P +Y + + L + A VL+++ K+G + +
Sbjct: 315 FMFKEKMVER-------GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIV 367
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G+ E+ M+ + Y+ LI G+ + + A L++ML
Sbjct: 368 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 427
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ ++ S++ L + R ML RN+ L T I L HG
Sbjct: 428 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 487
Query: 245 KAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
KA E+ KGF V ++ LC+ GKL EA ++ L +D N +I
Sbjct: 488 KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 547
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
G C ++ EAF E+V++GL + + L+ L KVEEA
Sbjct: 548 SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 157/369 (42%), Gaps = 12/369 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P+ +N LI S AG+L++A+++ + M + ++ S++Y+ LI+ C+ G D A
Sbjct: 360 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 419
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
E+L E+ G S+ + LC H A R + +++ R
Sbjct: 420 ERLLKEMLS-------IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 472
Query: 126 M-TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ T+I G C+ G + EL L + F+ D + L+ G + K A +++L
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ +++++++ K E+ M+ R ++ + + I LF +
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Query: 245 KAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A + + + G + ++ CK + E ++ + + + + N +I
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENL 361
C R+ A L ++ KG+ L+ + +VEEA + + + +E L
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR-MEGL 711
Query: 362 DRSVLSYSS 370
+ +V Y++
Sbjct: 712 EPNVFHYTA 720
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 96/192 (50%), Gaps = 11/192 (5%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+T +N LI ++C +G L AL++ E+MK+ ++ +SA+Y+ LI+ + ++A+ L
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLL 702
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
F+E+ + G +P Y + + G+ K E +LR++ + + ++Y
Sbjct: 703 FEEMRME-------GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G+ R+G LL M + +PD Y I G+L++ L A + + + +
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSD---EEN 812
Query: 188 YLPKTSTWHSIL 199
Y W+ ++
Sbjct: 813 YAAIIEGWNKLI 824
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 101/237 (42%), Gaps = 13/237 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T++ LI + ++EA++ +++ K + D +YS++I C+ ++
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS- 124
++ FDE+ K + QP Y + + C G+ A LR+ MK P S
Sbjct: 630 QEFFDEMMSKNV-------QPNTVVYNHLIRAYCRSGRLSMALE-LREDMKHKGISPNSA 681
Query: 125 -YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
Y ++I G E L M P+V Y LIDG+ + + + L +M
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
+ P T+ ++ G E++R+ M ++ I + S E ++G+
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD---SITYKEFIYGY 795
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 114/318 (35%), Gaps = 38/318 (11%)
Query: 78 VLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGHCREGA 137
VL G P + + L + +K + K + D + T I C+ G
Sbjct: 216 VLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGK 275
Query: 138 YENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHS 197
E +L M P+V ++ +IDG + A EKM++ P T+
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 198 ILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKG 257
++ L ++ V M + N+ + I+ G +KA EI +L+ KG
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 258 FCV---KIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDI-------------------- 294
+ +++ CK G+ A +LL L NV+
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Query: 295 ---------------DLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
L +I GLC+ + +A L ++ + KG + N L+ L
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Query: 340 EARGKVEEAAFISKRIPG 357
GK++EA I K I G
Sbjct: 516 CEAGKLDEAFRIQKEILG 533
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 153/347 (44%), Gaps = 11/347 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SPD F T I++ C G ++EA+K+F M+ V + +++ +I L G YD+A
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+++ E+ G +P +Y + + L + A VL+++ K+G + +
Sbjct: 315 FMFKEKMVER-------GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIV 367
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G+ E+ M+ + Y+ LI G+ + + A L++ML
Sbjct: 368 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 427
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ ++ S++ L + R ML RN+ L T I L HG
Sbjct: 428 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 487
Query: 245 KAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
KA E+ KGF V ++ LC+ GKL EA ++ L +D N +I
Sbjct: 488 KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 547
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
G C ++ EAF E+V++GL + + L+ L KVEEA
Sbjct: 548 SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 157/369 (42%), Gaps = 12/369 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P+ +N LI S AG+L++A+++ + M + ++ S++Y+ LI+ C+ G D A
Sbjct: 360 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 419
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
E+L E+ G S+ + LC H A R + +++ R
Sbjct: 420 ERLLKEMLS-------IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 472
Query: 126 M-TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ T+I G C+ G + EL L + F+ D + L+ G + K A +++L
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ +++++++ K E+ M+ R ++ + + I LF +
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Query: 245 KAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A + + + G + ++ CK + E ++ + + + + N +I
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENL 361
C R+ A L ++ KG+ L+ + +VEEA + + + +E L
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR-MEGL 711
Query: 362 DRSVLSYSS 370
+ +V Y++
Sbjct: 712 EPNVFHYTA 720
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 96/192 (50%), Gaps = 11/192 (5%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+T +N LI ++C +G L AL++ E+MK+ ++ +SA+Y+ LI+ + ++A+ L
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLL 702
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
F+E+ + G +P Y + + G+ K E +LR++ + + ++Y
Sbjct: 703 FEEMRME-------GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G+ R+G LL M + +PD Y I G+L++ L A + + + +
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSD---EEN 812
Query: 188 YLPKTSTWHSIL 199
Y W+ ++
Sbjct: 813 YAAIIEGWNKLI 824
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 101/237 (42%), Gaps = 13/237 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T++ LI + ++EA++ +++ K + D +YS++I C+ ++
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS- 124
++ FDE+ K + QP Y + + C G+ A LR+ MK P S
Sbjct: 630 QEFFDEMMSKNV-------QPNTVVYNHLIRAYCRSGRLSMALE-LREDMKHKGISPNSA 681
Query: 125 -YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
Y ++I G E L M P+V Y LIDG+ + + + L +M
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
+ P T+ ++ G E++R+ M ++ I + S E ++G+
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD---SITYKEFIYGY 795
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 114/318 (35%), Gaps = 38/318 (11%)
Query: 78 VLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGHCREGA 137
VL G P + + L + +K + K + D + T I C+ G
Sbjct: 216 VLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGK 275
Query: 138 YENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHS 197
E +L M P+V ++ +IDG + A EKM++ P T+
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 198 ILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKG 257
++ L ++ V M + N+ + I+ G +KA EI +L+ KG
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 258 FCV---KIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDI-------------------- 294
+ +++ CK G+ A +LL L NV+
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Query: 295 ---------------DLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
L +I GLC+ + +A L ++ + KG + N L+ L
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Query: 340 EARGKVEEAAFISKRIPG 357
GK++EA I K I G
Sbjct: 516 CEAGKLDEAFRIQKEILG 533
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 160/382 (41%), Gaps = 32/382 (8%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT TF TLIH EA+ + + M + +Y +++ LC+RGD D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 66 EKLFDEL----FEKEIV--------LCKF----------------GSQPLAASYKPIFQY 97
L +++ E +V LCK+ G +P +Y +
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 98 LCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
LC + + A R+L +++R + +++ +I +EG +L M++R PD
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
+ Y LI+GF D+ A E M+ P T+++++ + E +
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRG 273
M R + N T I F D A + + + G I ++ LCK G
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 274 KLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLN 333
KL +A + + ++ I N +I G+C+ +V + + L L KG+ ++ N
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544
Query: 334 DLVTALEARGKVEEAAFISKRI 355
+++ +G EEA + +++
Sbjct: 545 TMISGFCRKGLKEEADALFRKM 566
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 10/188 (5%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ T+NTLI+ C A +DE +++F M + ++ +Y+ LI Q D D A+ +
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTV 128
F ++ G P +Y + LC++GK KA V+ + ++R +P Y
Sbjct: 458 FKQMVSD-------GVHPNIMTYNTLLDGLCKNGKLEKA-MVVFEYLQRSKMEPTIYTYN 509
Query: 129 IM--GHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
IM G C+ G E+G++L + + PDV IY+ +I GF +K A KM +
Sbjct: 510 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569
Query: 187 SYLPKTST 194
LP + T
Sbjct: 570 GPLPDSGT 577
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/347 (18%), Positives = 147/347 (42%), Gaps = 11/347 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
FS + + ++ + + LD+A+ +F M + ++ L+ + + +D
Sbjct: 45 AFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD-- 102
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
L L EK + + G +Y + C + A +L ++MK G + +
Sbjct: 103 --LVISLGEK---MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT 157
Query: 126 MTVIM-GHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
++ ++ G+C + L+ M+ + PD + LI G +K A+ +++M+
Sbjct: 158 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 217
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T+ ++ L ++G + + M I N+ + + I+ L + H D
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
A + + KG + ++ LC + +A +LL ++ N ++ NA+I
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+ +++EA L E++++ + ++ + L+ +++EA
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 154/375 (41%), Gaps = 32/375 (8%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PD+ TFNTLIH EA+ + + M D +Y I++ LC+RGD D A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 66 EKLFDELFEKEI------------VLCKF----------------GSQPLAASYKPIFQY 97
L ++ + +I LC + G +P +Y + +
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 98 LCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
LC +G+ A R+L +++R + +++ +I +EG +L M++R PD
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
+ Y LI+GF D+ A E M+ P T+++++ + E +
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRG 273
M R + N T I F D A + + + G I ++ LC G
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 274 KLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLN 333
K+ A + + ++ DI N +I G+C+ +V + + L L KG+ +
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540
Query: 334 DLVTALEARGKVEEA 348
+++ +G EEA
Sbjct: 541 TMMSGFCRKGLKEEA 555
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 13/242 (5%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ T+NTLI C A +DE +++F M + ++ +Y+ LI Q + D A+ +
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--LSYM 126
F ++ G P +Y + LC +GK A V+ + ++R +P +Y
Sbjct: 454 FKQMVSD-------GVLPDIMTYSILLDGLCNNGKVETA-LVVFEYLQRSKMEPDIYTYN 505
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+I G C+ G E+G++L + + P+V Y ++ GF +K A +M +
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH-GHRDK 245
LP + T+++++ L G SA + M R+ R + ST + H G DK
Sbjct: 566 GPLPDSGTYNTLIRAHLRDGDKAASAELIREM--RSCRFVGDASTIGLVTNMLHDGRLDK 623
Query: 246 AF 247
+F
Sbjct: 624 SF 625
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 144/344 (41%), Gaps = 11/344 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P F+ L+ + D + + E M+N ++ + +YSILI C+R A +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
++ K G +P + + C + A ++ Q+++ G Q D ++ T
Sbjct: 139 LAKMM-------KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNT 191
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G R L+ M+ + PD+ Y +++G ++ LA+ L+KM +
Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK 251
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P +++I+ L +++ + M ++ IR N+ I L +G A
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 248 EIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
++ + ++ V ++ K GKL EA KL +K + DI +++I G
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
C +R+ EA + ++ K + N L+ +V+E
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 5/194 (2%)
Query: 160 YDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMML 219
Y LI+ F ++ + LA+ L KM+K Y P T +S+L ++ + M+
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 220 DRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFC----VKIEEVVQFLCKRGKL 275
+ + + I LF H +A +V+ + KG C V VV LCKRG +
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG-CQPDLVTYGIVVNGLCKRGDI 237
Query: 276 PEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDL 335
A LL + + + N +I LC V +A L E+ KG+ + N L
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 336 VTALEARGKVEEAA 349
+ L G+ +A+
Sbjct: 298 IRCLCNYGRWSDAS 311
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 152/340 (44%), Gaps = 14/340 (4%)
Query: 15 NTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFE 74
N+L+++ +++A+K+F+ FQ D+ +++ILIR LC G +KA +L
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLG---- 230
Query: 75 KEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT---QDPLSYMTVIMG 131
V+ FG +P +Y + Q C+ + KA + + + K G+ D ++Y ++I G
Sbjct: 231 ---VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSGSVCSPDVVTYTSMISG 286
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
+C+ G LL MLR P ++ L+DG+ + + L A E KM+ P
Sbjct: 287 YCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD 346
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVE 251
T+ S++ G + R+ M R + N + I L KA E++
Sbjct: 347 VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLG 406
Query: 252 LLYKKGFCVK---IEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEIN 308
L K + V+ CK GK+ EA ++ K D +I+G C
Sbjct: 407 QLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKG 466
Query: 309 RVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
R+ EA + +++V G + ++ L++ L G +EA
Sbjct: 467 RMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 119/253 (47%), Gaps = 14/253 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQV-TADSASYSILIRNLCQRGDYDK 64
G PD T+NTLI C + L++A ++F+++K+ V + D +Y+ +I C+ G +
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPL 123
A L D++ + G P ++ + + G+ AE + +++ G D +
Sbjct: 296 ASSLLDDML-------RLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVV 348
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
++ ++I G+CR G G+ L M R P+ Y LI+ +++ L A E L ++
Sbjct: 349 TFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQL 408
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN-INLSTKSIELLFGHGH 242
+P+ ++ ++ + G +E+ + M + + + I + L+ GH
Sbjct: 409 ASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTI----LIIGHCM 464
Query: 243 RDKAFEIVELLYK 255
+ + FE V + +K
Sbjct: 465 KGRMFEAVSIFHK 477
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TF +LI +C G + + +++E M + ++ +YSILI LC KA
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+L +L K+I+ QP Y P+ C+ GK +A ++ ++ K+ + D ++
Sbjct: 402 RELLGQLASKDII-----PQPFM--YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPD----VEIYDCLIDGFLQKD 171
+ +I+GHC +G + M+ PD + CL+ + K+
Sbjct: 455 FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKE 505
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 95/229 (41%), Gaps = 8/229 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P TFN L+ + AG + A ++ M +F D +++ LI C+ G +
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 366
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
+L++E+ + G P A +Y + LC + KA +L Q+ + P
Sbjct: 367 FRLWEEMNAR-------GMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y VI G C+ G ++ M ++ PD + LI G K + A+ KM+
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV 479
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKS 233
P T S+L+ LL+ G E+ + + + L TK+
Sbjct: 480 AIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLETKT 528
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 152/340 (44%), Gaps = 14/340 (4%)
Query: 15 NTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFE 74
N+L+++ +++A+K+F+ FQ D+ +++ILIR LC G +KA +L
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLG---- 230
Query: 75 KEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT---QDPLSYMTVIMG 131
V+ FG +P +Y + Q C+ + KA + + + K G+ D ++Y ++I G
Sbjct: 231 ---VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSGSVCSPDVVTYTSMISG 286
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
+C+ G LL MLR P ++ L+DG+ + + L A E KM+ P
Sbjct: 287 YCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD 346
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVE 251
T+ S++ G + R+ M R + N + I L KA E++
Sbjct: 347 VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLG 406
Query: 252 LLYKKGFCVK---IEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEIN 308
L K + V+ CK GK+ EA ++ K D +I+G C
Sbjct: 407 QLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKG 466
Query: 309 RVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
R+ EA + +++V G + ++ L++ L G +EA
Sbjct: 467 RMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 119/253 (47%), Gaps = 14/253 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQV-TADSASYSILIRNLCQRGDYDK 64
G PD T+NTLI C + L++A ++F+++K+ V + D +Y+ +I C+ G +
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPL 123
A L D++ + G P ++ + + G+ AE + +++ G D +
Sbjct: 296 ASSLLDDML-------RLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVV 348
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
++ ++I G+CR G G+ L M R P+ Y LI+ +++ L A E L ++
Sbjct: 349 TFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQL 408
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN-INLSTKSIELLFGHGH 242
+P+ ++ ++ + G +E+ + M + + + I + L+ GH
Sbjct: 409 ASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTI----LIIGHCM 464
Query: 243 RDKAFEIVELLYK 255
+ + FE V + +K
Sbjct: 465 KGRMFEAVSIFHK 477
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TF +LI +C G + + +++E M + ++ +YSILI LC KA
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+L +L K+I+ QP Y P+ C+ GK +A ++ ++ K+ + D ++
Sbjct: 402 RELLGQLASKDII-----PQPFM--YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPD----VEIYDCLIDGFLQKD 171
+ +I+GHC +G + M+ PD + CL+ + K+
Sbjct: 455 FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKE 505
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 95/229 (41%), Gaps = 8/229 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P TFN L+ + AG + A ++ M +F D +++ LI C+ G +
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 366
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
+L++E+ + G P A +Y + LC + KA +L Q+ + P
Sbjct: 367 FRLWEEMNAR-------GMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y VI G C+ G ++ M ++ PD + LI G K + A+ KM+
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV 479
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKS 233
P T S+L+ LL+ G E+ + + + L TK+
Sbjct: 480 AIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLETKT 528
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 170/403 (42%), Gaps = 47/403 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKN-------------------------- 39
G++PD +++T+++ +C G LD+ K+ E MK
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 40 ---FQ------VTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAAS 90
F + D+ Y+ LI C+RGD A K F E+ ++I P +
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT-------PDVLT 388
Query: 91 YKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWML 149
Y I C+ G +A ++ ++ +G + D +++ +I G+C+ G ++ + + M+
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 150 RRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPH 209
+ P+V Y LIDG ++ A E L +M K P T++SI+ L + G
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 210 ESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVV 266
E+ ++ + + T ++ G DKA EI++ + KG V ++
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 267 QFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLH 326
C G L + KLL + L + N+++ C N + A + ++ +G+
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 327 QELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYS 369
+ +LV ++EA F+ + + G + SV +YS
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKG-KGFSVSVSTYS 670
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 165/381 (43%), Gaps = 18/381 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PDT + TLI C G++ A K F M + +T D +Y+ +I CQ GD +A
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
KLF E+F CK G +P + ++ + C+ G + A RV +++ G + + ++
Sbjct: 406 GKLFHEMF------CK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G C+EG ++ ELL M + P++ Y+ +++G + A++ + +
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ T T+ +++ + G ++ + ML + ++ I + HG +
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+++ + KG +V+ C R L A + D ++
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA--AFISKRIPGLE 359
G C+ + EA+ L E+ KG ++ + L+ R K EA F R GL
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698
Query: 360 NLDRSVLSYSS----KKSRPN 376
D+ + + S K RP+
Sbjct: 699 A-DKEIFDFFSDTKYKGKRPD 718
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 156/349 (44%), Gaps = 14/349 (4%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
+ D F+ G L EA +VFE M N+ + S ++ + L + Y A
Sbjct: 171 WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRL-SKDCYKTAT 229
Query: 67 KL--FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPL 123
+ F E E+ +C ASY + ++C+ G+ ++A +L + +G T D +
Sbjct: 230 AIIVFREF--PEVGVCWN-----VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVI 282
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
SY TV+ G+CR G + ++L+ M R+ P+ IY +I + K A E +M
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
++ LP T + +++ ++G +++ M R+I ++ T I G
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 244 DKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
+A ++ ++ KG V E++ CK G + +A ++ ++ + ++ +
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
I GLC+ + A L +E+ + GL + N +V L G +EEA
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 170/403 (42%), Gaps = 47/403 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKN-------------------------- 39
G++PD +++T+++ +C G LD+ K+ E MK
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 40 ---FQ------VTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAAS 90
F + D+ Y+ LI C+RGD A K F E+ ++I P +
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT-------PDVLT 388
Query: 91 YKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWML 149
Y I C+ G +A ++ ++ +G + D +++ +I G+C+ G ++ + + M+
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 150 RRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPH 209
+ P+V Y LIDG ++ A E L +M K P T++SI+ L + G
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 210 ESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVV 266
E+ ++ + + T ++ G DKA EI++ + KG V ++
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 267 QFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLH 326
C G L + KLL + L + N+++ C N + A + ++ +G+
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 327 QELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYS 369
+ +LV ++EA F+ + + G + SV +YS
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKG-KGFSVSVSTYS 670
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 165/381 (43%), Gaps = 18/381 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PDT + TLI C G++ A K F M + +T D +Y+ +I CQ GD +A
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
KLF E+F CK G +P + ++ + C+ G + A RV +++ G + + ++
Sbjct: 406 GKLFHEMF------CK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G C+EG ++ ELL M + P++ Y+ +++G + A++ + +
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ T T+ +++ + G ++ + ML + ++ I + HG +
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+++ + KG +V+ C R L A + D ++
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA--AFISKRIPGLE 359
G C+ + EA+ L E+ KG ++ + L+ R K EA F R GL
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698
Query: 360 NLDRSVLSYSS----KKSRPN 376
D+ + + S K RP+
Sbjct: 699 A-DKEIFDFFSDTKYKGKRPD 718
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 156/349 (44%), Gaps = 14/349 (4%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
+ D F+ G L EA +VFE M N+ + S ++ + L + Y A
Sbjct: 171 WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRL-SKDCYKTAT 229
Query: 67 KL--FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPL 123
+ F E E+ +C ASY + ++C+ G+ ++A +L + +G T D +
Sbjct: 230 AIIVFREF--PEVGVCWN-----VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVI 282
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
SY TV+ G+CR G + ++L+ M R+ P+ IY +I + K A E +M
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
++ LP T + +++ ++G +++ M R+I ++ T I G
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 244 DKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
+A ++ ++ KG V E++ CK G + +A ++ ++ + ++ +
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
I GLC+ + A L +E+ + GL + N +V L G +EEA
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 156/354 (44%), Gaps = 11/354 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PD TF +L++ +C +++A+ +F+ + + +Y+ LIR LC+ + A
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+LF+++ GS+P +Y + LCE G+ A +LR +MKR + + ++
Sbjct: 208 VELFNQMGTN-------GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ +I + G EL M++ PDV Y LI+G A + M
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
++ P + +++ + + ++ M + + N T I+ G D
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
A E+ + + I ++ LC GK+ +A + + K +++I +I
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
G+C++ +V +AF L L KG+ + +++ RG + EA + K++
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 94/191 (49%), Gaps = 8/191 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ + TLIH C + +++ +K+F M V A++ +Y++LI+ C G D A
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVA 382
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+++F+++ + + P +Y + LC +GK KA + + KR + ++
Sbjct: 383 QEVFNQMSSRR-------APPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT 435
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C+ G E+ ++L + + P+V Y +I GF ++ A +KM
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Query: 185 KSSYLPKTSTW 195
+ +LP S +
Sbjct: 496 EDGFLPNESVY 506
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 104/251 (41%), Gaps = 8/251 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ TF LI + G L EA +++ M V D +Y LI LC G D+A ++
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYMT 127
F L E+ G P Y + C+ + ++ ++ ++G + ++Y
Sbjct: 316 F-YLMERN------GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G+C G + E+ M R PD+ Y+ L+DG K A+ E M K
Sbjct: 369 LIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKRE 428
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
T+ I+ + + G ++ + + + ++ N+ T I G +A
Sbjct: 429 MDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEAD 488
Query: 248 EIVELLYKKGF 258
+ + + + GF
Sbjct: 489 SLFKKMKEDGF 499
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 144/344 (41%), Gaps = 14/344 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SP +N LI C G+L K+ +NM + +Y+ LI LC +G DKA
Sbjct: 252 GCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 311
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L + + + + P +Y + L + + A R+L + +RG +
Sbjct: 312 VSLLERMVSSKCI-------PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 364
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G +EG E L M + P++ +Y L+DG ++ KP A E L +M+
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
S LP T+ S++ + G E+ +V M +N + I+ L G G
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKL---LLFSLKNHHNVDIDLCN 298
+A + + G V +++ LC G + A KL +L + D+ N
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEAR 342
++ GLC + A L ++++G ++ N + L +
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEK 588
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 142/319 (44%), Gaps = 15/319 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T+ TL+ C +DEA+ + + M++ + Y++LI LC++GD + KL
Sbjct: 220 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKL 279
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVL-RQIMKRGTQDPLSYMT 127
D +F K G P +Y + LC GK KA +L R + + + ++Y T
Sbjct: 280 VDNMFLK-------GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGT 332
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G ++ + LL M R + + IY LI G ++ K AM KM +
Sbjct: 333 LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 392
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P + ++ L +G P+E+ + M+ N + ++ F G ++A
Sbjct: 393 CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAV 452
Query: 248 EIVELLYKKG-----FCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
++ + + K G FC + ++ LC G++ EA + L D +++I
Sbjct: 453 QVWKEMDKTGCSRNKFCYSV--LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIK 510
Query: 303 GLCEINRVLEAFGLCYELV 321
GLC I + A L +E++
Sbjct: 511 GLCGIGSMDAALKLYHEML 529
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 153/362 (42%), Gaps = 43/362 (11%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
SP+ +FN +I + C +D A++VF M + D +Y L+ LC+ D+A
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGK-TRKAERVLRQIMKRGTQDPLSY 125
L DE+ + G P Y + LC+ G TR + V +K + ++Y
Sbjct: 243 LLLDEMQSE-------GCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTY 295
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
T+I G C +G + LL M+ +P+ Y LI+G +++ + A+ L M +
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE 355
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
Y + +++ L ++G E+ + M ++ + NI + + ++ L G ++
Sbjct: 356 RGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNE 415
Query: 246 AFEIVELL-------------------YKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSL 286
A EI+ + +K G C EE VQ + K +R +S+
Sbjct: 416 AKEILNRMIASGCLPNAYTYSSLMKGFFKTGLC---EEAVQVWKEMDKTGCSRNKFCYSV 472
Query: 287 KNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVE 346
+I GLC + RV EA + +++ G+ + + ++ L G ++
Sbjct: 473 -------------LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMD 519
Query: 347 EA 348
A
Sbjct: 520 AA 521
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 33/202 (16%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G S + ++ LI C G + EA+ V+ M + D+ +YS +I+ LC G D A
Sbjct: 462 GCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAA 521
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--- 122
KL+ E+ +E + SQP +Y + LC +A +L ++ RG DP
Sbjct: 522 LKLYHEMLCQE----EPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGC-DPDVI 576
Query: 123 -----LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAM 177
L+ ++ C +G R FL + L+ L++ + A
Sbjct: 577 TCNTFLNTLSEKSNSCDKG--------------RSFLEE------LVVRLLKRQRVSGAC 616
Query: 178 ETLEKMLKSSYLPKTSTWHSIL 199
+E ML PKTSTW I+
Sbjct: 617 TIVEVMLGKYLAPKTSTWAMIV 638
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 147/349 (42%), Gaps = 46/349 (13%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFE-----NMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+FN++++ + G L+ ++ NM N ++ + S++++I+ LC+ D+A +
Sbjct: 150 SFNSVLNVIINEGLYHRGLEFYDYVVNSNM-NMNISPNGLSFNLVIKALCKLRFVDRAIE 208
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYM 126
+F + E++ + P +Y + LC+ + +A +L ++ G + P+ Y
Sbjct: 209 VFRGMPERKCL-------PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYN 261
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+I G C++G +L+ M + +P+ Y+ LI G K K A+ LE+M+ S
Sbjct: 262 VLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSS 321
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
+P T+ +++ L+++ ++ R+ M +R N ++ + I LF
Sbjct: 322 KCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLF-------- 373
Query: 247 FEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCE 306
K GK EA L + +I + + ++ GLC
Sbjct: 374 ------------------------KEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR 409
Query: 307 INRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
+ EA + ++ G + L+ G EEA + K +
Sbjct: 410 EGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEM 458
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 151/362 (41%), Gaps = 20/362 (5%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G F T +++I S+ ++G+ D K+ ++ S+ ++ R + DK
Sbjct: 71 GSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDK 130
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKA----ERVLRQIMKRG-T 119
A LF + ++ F + S+ + + G + + V+ M +
Sbjct: 131 AVDLFHRMVDE------FRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNIS 184
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
+ LS+ VI C+ + E+ M R LPD Y L+DG ++++ A+
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLL 244
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
L++M P ++ ++ L +KG + RVT ++ + ++ + L+ G
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKG---DLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301
Query: 240 ---HGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVD 293
G DKA ++E + V ++ L K+ + +A +LL + ++++
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLN 361
Query: 294 IDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISK 353
+ + +I GL + + EA L ++ EKG + + LV L GK EA I
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 421
Query: 354 RI 355
R+
Sbjct: 422 RM 423
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 159/347 (45%), Gaps = 17/347 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P T+NTLI +C AGN +++ KV E MK + +++ L++ L + G + AE +
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENV 306
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTV 128
E+ + G P A ++ +F + K A V + G + ++
Sbjct: 307 LKEMKD-------LGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359
Query: 129 IMGH-CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ C+EG E E+L + + +P+ IY+ +IDG+ +K + A +E M K
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR---D 244
P ++ ++ R E G + + M + + ++ T +I L+ G+G + D
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSV--ETYNI-LIGGYGRKYEFD 476
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
K F+I++ + G V ++ LCK KL EA+ + + + + N +I
Sbjct: 477 KCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLI 536
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
G C ++ +AF E+++KG+ L N L+ L GK+ EA
Sbjct: 537 DGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEA 583
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 163/390 (41%), Gaps = 48/390 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD +N LI C G ++ A K MK V+ +Y+ILI ++ ++DK
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 478
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS- 124
FD L E E G+ P SY + LC+ K +A+ V R + RG +
Sbjct: 479 ---FDILKEME----DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRI 531
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C +G E+ + ML++ ++ Y+ LIDG K A + L ++
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVM---MLDRNIRQN-------INLSTK-S 233
+ P T++S+++ GF R + M I+ I+L TK
Sbjct: 592 RKGLKPDVFTYNSLISGY---GFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG 648
Query: 234 IEL---LFG--------------------HGHRDKAFEIVELLYKKGFCV---KIEEVVQ 267
IEL LFG HG +KAF + + + +K + ++
Sbjct: 649 IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLIL 708
Query: 268 FLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQ 327
K GKL E R L+ + D N ++ G CE+ + A+ E+ EKG
Sbjct: 709 GQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLL 768
Query: 328 ELTCLNDLVTALEARGKVEEAAFISKRIPG 357
++ N+LV+ L+ + +EA + + G
Sbjct: 769 DVCIGNELVSGLKEEWRSKEAEIVISEMNG 798
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 157/370 (42%), Gaps = 16/370 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D GF PD TF+ L + S + AL V+E + V ++ + SIL+ LC+ G +
Sbjct: 312 DLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIE 371
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
KAE++ K +V P Y + C G A + + K+G + D
Sbjct: 372 KAEEILGREMAKGLV-------PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH 424
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
L+Y +I C G EN + + M + P VE Y+ LI G+ +K + + L++
Sbjct: 425 LAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKE 484
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M + +P ++ +++ L + E+ V M DR + + + I+ G
Sbjct: 485 MEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGK 544
Query: 243 RDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNA 299
+ AF + + KKG V ++ L GKL EA LLL + D+ N+
Sbjct: 545 IEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNS 604
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLE 359
+I G V L E+ G+ L + L++ +E +++R+ G
Sbjct: 605 LISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLC-----TKEGIELTERLFGEM 659
Query: 360 NLDRSVLSYS 369
+L +L Y+
Sbjct: 660 SLKPDLLVYN 669
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 136/332 (40%), Gaps = 23/332 (6%)
Query: 27 LDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFG-SQ 85
+ EA +F ++N + S S ++L+ +L + + +F + E + KF +
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 86 PLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGHCREGAYENGYELL 145
+ A+ K L + GK E R R Y +I G C+ + +L
Sbjct: 185 AIQAAVK-----LSDVGKG--LELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLF 237
Query: 146 IWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEK 205
ML R LP + Y+ LIDG+ + P + + E+M P T++++L L +
Sbjct: 238 DEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKA 297
Query: 206 GFPHESARVTVMMLDRNIRQNINLSTKSIELLF-GHGHRDK---AFEIVELLYKKGFCVK 261
G ++ V M D + + +LF G+ +K A + E G VK
Sbjct: 298 GMVEDAENVLKEMKDLGFVPD----AFTFSILFDGYSSNEKAEAALGVYETAVDSG--VK 351
Query: 262 IEE-----VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGL 316
+ ++ LCK GK+ +A ++L + + + N +I G C ++ A
Sbjct: 352 MNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMK 411
Query: 317 CYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+ ++G+ + N L+ G++E A
Sbjct: 412 IEAMEKQGMKPDHLAYNCLIRRFCELGEMENA 443
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 160/364 (43%), Gaps = 19/364 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SP+ TFN LI H S GN EALK+F M+ +T SY +L+ LC+ ++D A
Sbjct: 368 GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA 427
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ + + + + +Y + LC++G +A +L ++ K G D ++
Sbjct: 428 RGFYMRMKRNGVCVGRI-------TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVT 480
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C+ G ++ E++ + R P+ IY LI + A+ E M+
Sbjct: 481 YSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI 540
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIE-LLFGHGHR 243
+ T++ ++ L + G E+ M I N T S + L+ G+G+
Sbjct: 541 LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPN----TVSFDCLINGYGNS 596
Query: 244 D---KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
KAF + + + K G +++ LCK G L EA K L VD +
Sbjct: 597 GEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMY 656
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPG 357
N ++ +C+ + +A L E+V++ + + L++ L +GK A +K
Sbjct: 657 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 716
Query: 358 LENL 361
N+
Sbjct: 717 RGNV 720
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 142/312 (45%), Gaps = 19/312 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF+P T N ++ S +G + M ++ D A+++ILI LC G ++K+
Sbjct: 193 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 252
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L ++ EK G P +Y + + C+ G+ + A +L + +G D +
Sbjct: 253 SYLMQKM-EKS------GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCT 305
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I CR GY LL M +R P+ Y+ LI+GF + K L+A + L +ML
Sbjct: 306 YNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEML 365
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
P T+++++ + +G E+ ++ MM + + S S +L ++
Sbjct: 366 SFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP----SEVSYGVLLDGLCKN 421
Query: 245 KAFEIVELLY----KKGFCV---KIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
F++ Y + G CV ++ LCK G L EA LL K+ + DI
Sbjct: 422 AEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTY 481
Query: 298 NAVILGLCEINR 309
+A+I G C++ R
Sbjct: 482 SALINGFCKVGR 493
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 138/312 (44%), Gaps = 11/312 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G++P T+NT++H +C G A+++ ++MK+ V AD +Y++LI +LC+ K
Sbjct: 263 GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKG 322
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
L ++ ++ I P +Y + GK A ++L +++ G + + ++
Sbjct: 323 YLLLRDMRKRMI-------HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 375
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ +I GH EG ++ ++ M + P Y L+DG + + LA +M
Sbjct: 376 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 435
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
++ T+ ++ L + GF E+ + M I +I + I G
Sbjct: 436 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 495
Query: 245 KAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
A EIV +Y+ G + ++ C+ G L EA ++ + H D N ++
Sbjct: 496 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 555
Query: 302 LGLCEINRVLEA 313
LC+ +V EA
Sbjct: 556 TSLCKAGKVAEA 567
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 151/361 (41%), Gaps = 18/361 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + D TFN L+ S C AG + EA + M + + ++ S+ LI G+ KA
Sbjct: 543 GHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKA 602
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK-RGTQDPLS 124
+FDE+ K G P +Y + + LC+ G R+AE+ L+ + D +
Sbjct: 603 FSVFDEM-------TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 655
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLA-METLEKM 183
Y T++ C+ G L M++R LPD Y LI G +K K ++A + E
Sbjct: 656 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 715
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ + LP + + + + G A + N+ ++ T + ++ G+
Sbjct: 716 ARGNVLPNKVMYTCFVDGMFKAG--QWKAGIYFREQMDNLGHTPDIVTTN-AMIDGYSRM 772
Query: 244 DKAFEIVELLYKKGF------CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
K + +LL + G ++ KR + + L + N D C
Sbjct: 773 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 832
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPG 357
++++LG+CE N + + + +G+ + N L++ A G++ A + K +
Sbjct: 833 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 892
Query: 358 L 358
L
Sbjct: 893 L 893
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 152/345 (44%), Gaps = 13/345 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD TFN LI+ C+ G+ +++ + + M+ +Y+ ++ C++G + A +L
Sbjct: 231 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 290
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
D + K G +Y + LC + K +LR + KR + ++Y T
Sbjct: 291 LDHMKSK-------GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 343
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G EG +LL ML P+ ++ LIDG + + A++ M+++
Sbjct: 344 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY-MMEAK 402
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRN-IRQNINLSTKSIELLFGHGHRDKA 246
L + + +L L K + AR M + RN + T I+ L +G D+A
Sbjct: 403 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 462
Query: 247 FEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
++ + K G V ++ CK G+ A++++ + + + + + +I
Sbjct: 463 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 522
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
C + + EA + ++ +G ++ N LVT+L GKV EA
Sbjct: 523 CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 567
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 34/234 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SP++ + LI+ C G++ A V E M ++ + + S ++R L + G D+A
Sbjct: 929 GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 988
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKR-GTQ-DPL 123
L + + ++V P AS+ + C++G +A LR +M G + D +
Sbjct: 989 TLLLRFMLKMKLV-------PTIASFTTLMHLCCKNGNVIEALE-LRVVMSNCGLKLDLV 1040
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
SY +I G C +G +EL M FL + Y LI G L ++ +
Sbjct: 1041 SYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADI---- 1096
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELL 237
IL LL +GF +T M L ++ +N+ ++ + ++ L
Sbjct: 1097 --------------ILKDLLARGF------ITSMSLSQDSHRNLKMAMEKLKAL 1130
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 152/407 (37%), Gaps = 68/407 (16%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY------- 62
DT +NTL+ + C +GNL +A+ +F M + DS +Y+ LI LC++G
Sbjct: 652 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 711
Query: 63 DKAEKLFDELFEKEIVLC----------------------KFGSQPLAASYKPIFQYLCE 100
+AE + L K + C G P + +
Sbjct: 712 KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR 771
Query: 101 HGKTRKAERVLRQI-MKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEI 159
GK K +L ++ + G + +Y ++ G+ + + L ++ LPD
Sbjct: 772 MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 831
Query: 160 YDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKG------------- 206
L+ G + + + ++ L+ + T++ ++++ G
Sbjct: 832 CHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMT 891
Query: 207 -----FPHESARVTVMMLDRNIR-------------QNINL-STKSIELLFG---HGHRD 244
++ V +L+RN R Q I+ S K I L+ G G
Sbjct: 892 SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 951
Query: 245 KAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
AF + E + C V +V+ L K GK EA LL F LK I ++
Sbjct: 952 TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 1011
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
C+ V+EA L + GL +L N L+T L A+G + A
Sbjct: 1012 HLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALA 1058
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 7/193 (3%)
Query: 158 EIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVM 217
+YD LI +L++ ++E M + P T ++IL +++ G
Sbjct: 164 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 223
Query: 218 MLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGK 274
ML R I ++ I +L G +K+ +++ + K G+ V V+ + CK+G+
Sbjct: 224 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283
Query: 275 LPEARKLLLFSLKNHHNVDIDLC--NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCL 332
A +LL VD D+C N +I LC NR+ + + L ++ ++ +H
Sbjct: 284 FKAAIELL--DHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341
Query: 333 NDLVTALEARGKV 345
N L+ GKV
Sbjct: 342 NTLINGFSNEGKV 354
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 129/349 (36%), Gaps = 15/349 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PD T N +I + G +++ + M N + +Y+IL+ +R D +
Sbjct: 754 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 813
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L+ + I+ K L +CE ++L+ + RG + D +
Sbjct: 814 FLLYRSIILNGILPDKLTCHSLVLG-------ICESNMLEIGLKILKAFICRGVEVDRYT 866
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ +I C G ++L+ M D + D ++ + + + L +M
Sbjct: 867 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 926
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K P++ + ++ L G + V M+ I + + L G D
Sbjct: 927 KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 986
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFL---CKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A ++ + K I + CK G + EA +L + +D+ N +I
Sbjct: 987 EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLI 1046
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAF 350
GLC + AF L E+ G T L+ L AR E AF
Sbjct: 1047 TGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLAR----ETAF 1091
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 151/330 (45%), Gaps = 16/330 (4%)
Query: 14 FNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELF 73
FNT+I S C +++ A+ +F M+ + + +Y+ LI LC G + A +L +
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 74 EKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGH 132
EK+I P ++ + + GK +AE++ ++++R D ++Y +I G
Sbjct: 321 EKKI-------NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373
Query: 133 CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKT 192
C + ++ +M+ +D LP+++ Y+ LI+GF + + +E +M + + T
Sbjct: 374 CMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT 433
Query: 193 STWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVEL 252
T+ +I+ + G + V M+ + +I + + L +G D A I +
Sbjct: 434 VTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKY 493
Query: 253 LYKKGFCVKI---EEVVQFLCKRGKLPEARKLLL-FSLKNHHNVDIDLCNAVILGLCEIN 308
L K + I +++ +CK GK+ EA L S+K D+ N +I GLC
Sbjct: 494 LQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKP----DVVTYNTMISGLCSKR 549
Query: 309 RVLEAFGLCYELVEKGLHQELTCLNDLVTA 338
+ EA L ++ E G N L+ A
Sbjct: 550 LLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 163/379 (43%), Gaps = 43/379 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT TF TLIH EA+ + + M D +Y ++ LC+RGD D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 66 EKLFDELFEKEI------------VLCKF----------------GSQPLAASYKPIFQY 97
L +++ I LCK+ G +P +Y +
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 98 LCEHGKTRKAERVLRQIM-KRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
LC +G+ A R+L ++ K+ + +++ +I +EG +L M++R PD
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
Y+ LI+GF ++ A + + M+ LP T+++++ + + +
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE-------VVQFL 269
M R + N T I+ F G D A ++++K+ ++ ++ L
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSA----QMVFKQMVSNRVPTDIMTYSILLHGL 478
Query: 270 CKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQEL 329
C GKL A + + K+ ++I + N +I G+C+ +V EA+ L L + ++
Sbjct: 479 CSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDV 535
Query: 330 TCLNDLVTALEARGKVEEA 348
N +++ L ++ ++EA
Sbjct: 536 VTYNTMISGLCSKRLLQEA 554
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 150/360 (41%), Gaps = 16/360 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G S D T++ I+ C L AL V M D + S L+ C A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L D++ E G +P ++ + L H K +A ++ Q+++RG Q D ++
Sbjct: 173 VALVDQMVE-------MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT 225
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y TV+ G C+ G + LL M +V I++ +ID + +A++ +M
Sbjct: 226 YGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEME 285
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
P T++S++ L G +++R+ ML++ I N+ I+ F G
Sbjct: 286 TKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLV 345
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A ++ E + ++ + ++ C +L EA+++ F + +I N +I
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA-----AFISKRIP 356
G C+ RV + L E+ ++GL ++ G + A +S R+P
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 10/201 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +T T+ T+I AG+ D A VF+ M + +V D +YSIL+ LC G D A
Sbjct: 428 GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA 487
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
+F L + E+ L F Y + + +C+ GK +A + + + D ++Y
Sbjct: 488 LVIFKYLQKSEMELNIF-------IYNTMIEGMCKAGKVGEAWDLFCSLSIK--PDVVTY 538
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
T+I G C + + +L M LP+ Y+ LI L+ + E +++M
Sbjct: 539 NTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRS 598
Query: 186 SSYLPKTSTWHSILARLLEKG 206
S ++ ST S++ +L G
Sbjct: 599 SGFVGDASTI-SLVTNMLHDG 618
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 110/277 (39%), Gaps = 10/277 (3%)
Query: 82 FGSQPLAASYKPIFQY---LCEHGKTRKAERVL---RQIMKRG-TQDPLSYMTVIMGHCR 134
FG + + I ++ L K K E V+ Q+ G + D +Y I CR
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCR 130
Query: 135 EGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTST 194
+L M++ + PD+ L++G+ + A+ +++M++ Y P T T
Sbjct: 131 RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 195 WHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEI---VE 251
+ +++ L E+ + M+ R + ++ + L G D A + +E
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME 250
Query: 252 LLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVL 311
K V ++ LCK + A L ++ N++I LC R
Sbjct: 251 AARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWS 310
Query: 312 EAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+A L ++EK ++ + N L+ A GK+ EA
Sbjct: 311 DASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 152/355 (42%), Gaps = 17/355 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G +P+ TF TLI+ C G +D A +F+ M+ + D +YS LI + G
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLG 338
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
KLF + K G + + + G A V ++++ +G + +
Sbjct: 339 MGHKLFSQALHK-------GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
++Y +I G C++G + + +L+R P + Y LIDGF + E
Sbjct: 392 VTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M+K Y P + ++ L ++G + R +V ML ++IR N+ + I+
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511
Query: 243 RDKAFEIVELLYKKGF---------CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVD 293
D+A ++ L+ G +++ + CK K +L +N + D
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISAD 571
Query: 294 IDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
I +CN VI L + +R+ +A L+E + ++ N ++ + +++EA
Sbjct: 572 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 626
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 8/188 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+G PD T+NT+I +CS LDEA ++FE +K ++ + +ILI LC+ D D
Sbjct: 600 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 659
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
A ++F + EK GS+P A +Y + + + + ++ ++ ++G +
Sbjct: 660 GAIRMFSIMAEK-------GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSI 712
Query: 124 -SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
SY +I G C+ G + + + LPDV Y LI G+ + + + A E
Sbjct: 713 VSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEH 772
Query: 183 MLKSSYLP 190
ML++ P
Sbjct: 773 MLRNGVKP 780
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 154/375 (41%), Gaps = 22/375 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D D C F L+ C G +D+AL++F V S ++ +L D
Sbjct: 141 DRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVD 198
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAAS-YKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP 122
FD+L C+ G +P S + + L G+ KA R +M+RG +
Sbjct: 199 LIADHFDKL-------CRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVG 251
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+ ++ E LL +L P+V + LI+GF ++ + A + +
Sbjct: 252 IVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M + P + +++ + G ++ L + ++ ++ + + +I++ G
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 243 RDKAFEIVELLYKKGFCVKIEE-------VVQFLCKRGKLPEARKLLLFSLKNHHNVDID 295
A ++YK+ C I +++ LC+ G++ EA + LK I
Sbjct: 372 LATA----SVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIV 427
Query: 296 LCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
+++I G C+ + F L ++++ G ++ LV L +G + A S ++
Sbjct: 428 TYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487
Query: 356 PGLENLDRSVLSYSS 370
G +++ +V+ ++S
Sbjct: 488 LG-QSIRLNVVVFNS 501
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/362 (19%), Positives = 145/362 (40%), Gaps = 59/362 (16%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P T+++LI C GNL ++E+M D Y +L+ L ++G A
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 66 EKL----------------------------FDELFEKEIVLCKFGSQPLAASYKPIFQY 97
+ FDE + ++ +G +P A++ + +
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540
Query: 98 ------LCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMG---HCREGAYENGYELLIWM 148
C+H K ++ + + ++ V++ C E+ + +
Sbjct: 541 SIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHR--IEDASKFFNNL 598
Query: 149 LRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFP 208
+ PD+ Y+ +I G+ + A E + + + P T T +IL +L K
Sbjct: 599 IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL-TILIHVLCKNND 657
Query: 209 HESA-RVTVMMLDRNIRQN-------INLSTKSIELLFGHGHRDKAFEIVELLYKKGFCV 260
+ A R+ +M ++ + N ++ +KS+++ + +F++ E + +KG
Sbjct: 658 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI-------EGSFKLFEEMQEKGISP 710
Query: 261 KIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLC 317
I ++ LCKRG++ EA + ++ D+ +I G C++ R++EA L
Sbjct: 711 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA-ALL 769
Query: 318 YE 319
YE
Sbjct: 770 YE 771
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 158/366 (43%), Gaps = 29/366 (7%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
MK DG F P+ T+N L+ + C +D A K+ M N D+ SY+ +I ++C+ G
Sbjct: 172 MKRDG-FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG 230
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-T 119
+ +L E FE P+ + Y + LC+ + A ++R+++++G +
Sbjct: 231 LVKEGREL-AERFE-----------PVVSVYNALINGLCKEHDYKGAFELMREMVEKGIS 278
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
+ +SY T+I C G E + L ML+R P++ L+ G + A++
Sbjct: 279 PNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDL 338
Query: 180 LEKMLKSSYL-PKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
+M++ L P +++++ G ++ V M + NI I
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 239 GHGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDID 295
G D A I + G C V +V+ LC+ K EA L+ K + +
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVP 458
Query: 296 LCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTC------LNDLVTALEARGKVEEAA 349
NA I GLC+ R+ A E V + + Q+ C N+L+ L ++EEA
Sbjct: 459 TFNAFIKGLCDAGRLDWA-----EKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY 513
Query: 350 FISKRI 355
+++ I
Sbjct: 514 GLTREI 519
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 101/219 (46%), Gaps = 12/219 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ +NTL+ CS GN+ +A+ VF +M+ + + +Y LI +RG D A
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-- 123
+++++ G P Y + + LC H K ++AE ++ +IM + P
Sbjct: 407 VYIWNKMLTS-------GCCPNVVVYTNMVEALCRHSKFKEAESLI-EIMSKENCAPSVP 458
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFL-PDVEIYDCLIDGFLQKDKPLLAMETLEK 182
++ I G C G + ++ M ++ P++ Y+ L+DG + ++ A +
Sbjct: 459 TFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTRE 518
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESAR-VTVMMLD 220
+ +ST++++L G P + + V MM+D
Sbjct: 519 IFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVD 557
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENM-KNFQVTADSASYSILIRNLCQRGDYDKAE 66
+P TFN I C AG LD A KVF M + + + +Y+ L+ L + ++A
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY 513
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSY 125
L E+F + G + +++Y + C G A +++ ++M G + D ++
Sbjct: 514 GLTREIFMR-------GVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITM 566
Query: 126 MTVIMGHCREGAYENGYELL--IWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+I+ +C++G E ++L + RR + PDV Y +I G + + + LE+M
Sbjct: 567 NMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERM 626
Query: 184 LKSSYLPKTSTWHSIL 199
+ + +P +TW ++
Sbjct: 627 ISAGIVPSIATWSVLI 642
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 8/207 (3%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M G G P+ TFNTLIH C A L EA KVF MK V ++ +Y+ LI Q+G
Sbjct: 298 MMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQG 357
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-T 119
D++ A + ++++ +C G Q +Y + LC+ KTRKA + ++++ K
Sbjct: 358 DHEMAFRFYEDM------VCN-GIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
+ ++ +IMG C + G+EL M+R P+ + ++ L+ F + + A +
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKG 206
L +M++ S + T H + L +G
Sbjct: 471 LREMVRRSIPLDSRTVHQVCNGLKHQG 497
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 98/194 (50%), Gaps = 10/194 (5%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SP+ T N ++ +C +G LD+ +++ ++M+ A SY+ LI C++G A K
Sbjct: 235 SPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALK 294
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--LSY 125
L + ++ K G QP ++ + C K ++A +V + MK P ++Y
Sbjct: 295 L-------KNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGE-MKAVNVAPNTVTY 346
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
T+I G+ ++G +E + M+ D+ Y+ LI G ++ K A + ++++ K
Sbjct: 347 NTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDK 406
Query: 186 SSYLPKTSTWHSIL 199
+ +P +ST+ +++
Sbjct: 407 ENLVPNSSTFSALI 420
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 106/250 (42%), Gaps = 13/250 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF ++NTLI HC G L ALK+ M + + +++ LI C+ +A
Sbjct: 268 GFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEA 327
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
K+F E+ + P +Y + + G A R ++ G Q D L+
Sbjct: 328 SKVFGEMKAVNVA-------PNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C++ + + + + + +P+ + LI G + E + M+
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI 440
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSI-ELLFGHGHR 243
+S P T++ +++ +E +L +R++I L ++++ ++ G H+
Sbjct: 441 RSGCHPNEQTFNMLVSAFCR----NEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQ 496
Query: 244 DKAFEIVELL 253
K + +LL
Sbjct: 497 GKDQLVKKLL 506
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 130/328 (39%), Gaps = 40/328 (12%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
F++L + A F MK++ S + + +L +G D A +
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR----- 224
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMG 131
F +E+ CK P + + C GK K +L+ + + G + +SY T+I G
Sbjct: 225 FYREMRRCKISPNPYTLNM--VMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAG 282
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
HC +G + +L M + P+V ++ LI GF + K A + +M + P
Sbjct: 283 HCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPN 342
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVE 251
T T+++++ ++G + R M+ I+++I L+ + L+FG
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDI-LTYNA--LIFG------------ 387
Query: 252 LLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVL 311
L K+ K + V+ L K +P + +A+I+G C
Sbjct: 388 -LCKQAKTRKAAQFVKELDKENLVPNSSTF----------------SALIMGQCVRKNAD 430
Query: 312 EAFGLCYELVEKGLHQELTCLNDLVTAL 339
F L ++ G H N LV+A
Sbjct: 431 RGFELYKSMIRSGCHPNEQTFNMLVSAF 458
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 8/207 (3%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M G G P+ TFNTLIH C A L EA KVF MK V ++ +Y+ LI Q+G
Sbjct: 298 MMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQG 357
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-T 119
D++ A + ++++ +C G Q +Y + LC+ KTRKA + ++++ K
Sbjct: 358 DHEMAFRFYEDM------VCN-GIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
+ ++ +IMG C + G+EL M+R P+ + ++ L+ F + + A +
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKG 206
L +M++ S + T H + L +G
Sbjct: 471 LREMVRRSIPLDSRTVHQVCNGLKHQG 497
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 98/194 (50%), Gaps = 10/194 (5%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SP+ T N ++ +C +G LD+ +++ ++M+ A SY+ LI C++G A K
Sbjct: 235 SPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALK 294
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--LSY 125
L + ++ K G QP ++ + C K ++A +V + MK P ++Y
Sbjct: 295 L-------KNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGE-MKAVNVAPNTVTY 346
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
T+I G+ ++G +E + M+ D+ Y+ LI G ++ K A + ++++ K
Sbjct: 347 NTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDK 406
Query: 186 SSYLPKTSTWHSIL 199
+ +P +ST+ +++
Sbjct: 407 ENLVPNSSTFSALI 420
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 106/250 (42%), Gaps = 13/250 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF ++NTLI HC G L ALK+ M + + +++ LI C+ +A
Sbjct: 268 GFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEA 327
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
K+F E+ + P +Y + + G A R ++ G Q D L+
Sbjct: 328 SKVFGEMKAVNVA-------PNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C++ + + + + + +P+ + LI G + E + M+
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI 440
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSI-ELLFGHGHR 243
+S P T++ +++ +E +L +R++I L ++++ ++ G H+
Sbjct: 441 RSGCHPNEQTFNMLVSAFCR----NEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQ 496
Query: 244 DKAFEIVELL 253
K + +LL
Sbjct: 497 GKDQLVKKLL 506
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 130/328 (39%), Gaps = 40/328 (12%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
F++L + A F MK++ S + + +L +G D A +
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR----- 224
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMG 131
F +E+ CK P + + C GK K +L+ + + G + +SY T+I G
Sbjct: 225 FYREMRRCKISPNPYTLNM--VMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAG 282
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
HC +G + +L M + P+V ++ LI GF + K A + +M + P
Sbjct: 283 HCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPN 342
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVE 251
T T+++++ ++G + R M+ I+++I L+ + L+FG
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDI-LTYNA--LIFG------------ 387
Query: 252 LLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVL 311
L K+ K + V+ L K +P + +A+I+G C
Sbjct: 388 -LCKQAKTRKAAQFVKELDKENLVPNSSTF----------------SALIMGQCVRKNAD 430
Query: 312 EAFGLCYELVEKGLHQELTCLNDLVTAL 339
F L ++ G H N LV+A
Sbjct: 431 RGFELYKSMIRSGCHPNEQTFNMLVSAF 458
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 161/347 (46%), Gaps = 11/347 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G S TFN L+ C G++ E K+ + + V + +Y++ I+ LCQRG+ D A
Sbjct: 211 GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
++ L E+ G +P +Y + LC++ K ++AE L +++ G + D +
Sbjct: 271 VRMVGCLIEQ-------GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYT 323
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G+C+ G + ++ + F+PD Y LIDG + + A+ + L
Sbjct: 324 YNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEAL 383
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
P +++++ L +G E+A++ M ++ + + + L G
Sbjct: 384 GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVS 443
Query: 245 KAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
A +V+++ KG+ I ++ + K+ A ++L L N + D+ N+++
Sbjct: 444 DADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLL 503
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
GLC+ ++ + +VEKG L N L+ +L K++EA
Sbjct: 504 NGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEA 550
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 161/390 (41%), Gaps = 47/390 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD+ T+NTLI +C G + A ++ + D +Y LI LC G+ ++A
Sbjct: 316 GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRA 375
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
LF+E K G +P Y + + L G +A ++ ++ ++G + +
Sbjct: 376 LALFNEALGK-------GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQT 428
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ ++ G C+ G + L+ M+ + + PD+ ++ LI G+ + K A+E L+ ML
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML 488
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T++S+L L + + M+++ N+ +E L + D
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLD 548
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRG----------KLPEARK---------LL 282
+A ++E + K V ++ CK G K+ EA K ++
Sbjct: 549 EALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNII 608
Query: 283 LFSLKNHHNVD---------IDLC--------NAVILGLCEINRVLEAFGLCYELVEKGL 325
+ + NV +D C ++ G C+ V + E++E G
Sbjct: 609 IHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGF 668
Query: 326 HQELTCLNDLVTALEARGKVEEAAFISKRI 355
LT L ++ L +V EAA I R+
Sbjct: 669 IPSLTTLGRVINCLCVEDRVYEAAGIIHRM 698
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 165/384 (42%), Gaps = 46/384 (11%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENM---------------------KNFQ- 41
D G +PD +F + S C AL++ NM +NF+
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA 198
Query: 42 -------------VTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLA 88
V+ ++++ L+R LC++GD + EKL D++ ++ G P
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKR-------GVLPNL 251
Query: 89 ASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIW 147
+Y Q LC+ G+ A R++ ++++G + D ++Y +I G C+ ++ L
Sbjct: 252 FTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGK 311
Query: 148 MLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGF 207
M+ PD Y+ LI G+ + LA + + + ++P T+ S++ L +G
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE 371
Query: 208 PHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE--- 264
+ + + L + I+ N+ L I+ L G +A ++ + +KG +++
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431
Query: 265 VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKG 324
+V LCK G + +A L+ + + DI N +I G ++ A + +++ G
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 325 LHQELTCLNDLVTALEARGKVEEA 348
+ ++ N L+ L K E+
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDV 515
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 7/188 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P+ TFN L+ S C LDEAL + E MKN V D+ ++ LI C+ GD D A
Sbjct: 526 GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGA 585
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
LF ++ E V S P +Y I E AE++ ++++ R D +
Sbjct: 586 YTLFRKMEEAYKV---SSSTP---TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYT 639
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ G C+ G GY+ L+ M+ F+P + +I+ +D+ A + +M+
Sbjct: 640 YRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMV 699
Query: 185 KSSYLPKT 192
+ +P+
Sbjct: 700 QKGLVPEA 707
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 151/365 (41%), Gaps = 51/365 (13%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PD T+ +LI C G + AL +F + + Y+ LI+ L +G +A
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
+L +E+ EK ++ P ++ + LC+ G A+ +++ ++ +G D +
Sbjct: 411 AQLANEMSEKGLI-------PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ +I G+ + EN E+L ML PDV Y+ L++G + K MET + M+
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMV 523
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T++ +L L E+ + M ++++ + I+ +G D
Sbjct: 524 EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583
Query: 245 KAFEI---VELLYK--------------------------------------KGFCVKIE 263
A+ + +E YK G+ ++
Sbjct: 584 GAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRL- 642
Query: 264 EVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEK 323
+V CK G + K LL ++N + VI LC +RV EA G+ + +V+K
Sbjct: 643 -MVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 324 GLHQE 328
GL E
Sbjct: 702 GLVPE 706
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 148/342 (43%), Gaps = 25/342 (7%)
Query: 25 GNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGS 84
G + EA+ VFE M + SY+ ++ L G +D+A K++ + ++ G
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR-------GI 142
Query: 85 QPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYE 143
P S+ + C+ + A R+L + +G + + ++Y TV+ G E GYE
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 144 LLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLL 203
L ML + ++ L+ +K + L+K++K LP T++ + L
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 204 EKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIE 263
++G + R+ ++++ + ++ L++G K F+ E+ K +E
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNN---LIYGLCKNSK-FQEAEVYLGKMVNEGLE 318
Query: 264 -------EVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLC---EINRVLEA 313
++ CK G + A +++ ++ N D ++I GLC E NR L
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 314 FGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
F E + KG+ + N L+ L +G + EAA ++ +
Sbjct: 379 FN---EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 147/361 (40%), Gaps = 49/361 (13%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMK-NFQVTADSASYSILIRNLCQR 59
M+ + GF T+ ++I G + +V +M+ N Y ++N ++
Sbjct: 30 MRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRK 89
Query: 60 GDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG- 118
G +A +F+ + + C +P SY I L + G +A +V ++ RG
Sbjct: 90 GKVQEAVNVFERM---DFYDC----EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 119 TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME 178
T D S+ + C+ LL M + +V Y ++ GF +++ E
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 179 TLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNI--NLSTKSIEL 236
KML S ST++ +L L +KG E + +LD+ I++ + NL T ++
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEK----LLDKVIKRGVLPNLFTYNL-- 256
Query: 237 LFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL 296
+Q LC+RG+L A +++ ++ D+
Sbjct: 257 ----------------------------FIQGLCQRGELDGAVRMVGCLIEQGPKPDVIT 288
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIP 356
N +I GLC+ ++ EA ++V +GL + N L+ G V+ +++RI
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ----LAERIV 344
Query: 357 G 357
G
Sbjct: 345 G 345
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 163/380 (42%), Gaps = 25/380 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEAL---------------KVFENMKNFQVTADSASYS 50
GF PD TFNTL+H C + EAL +F+ M +T +++
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFN 230
Query: 51 ILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERV 110
LI LC G +A L +++ K G +Y I +C+ G T+ A +
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGK-------GLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 111 LRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQ 169
L ++ + + D + Y +I C++G + + L ML + P+V Y+C+IDGF
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 170 KDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINL 229
+ A L M++ P T++++++ +++G E+ ++ ML R I +
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 230 STKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNH 289
I H D A + +L+ V ++ C+ ++ E +LL +
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMASPDV-VTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 290 HNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
+ N +I G CE++ + A L E++ G+ + N L+ K+EEA
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 350 FISKRIPGLENLDRSVLSYS 369
+ + I + +D ++Y+
Sbjct: 523 ELFEVIQ-MSKIDLDTVAYN 541
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 160/360 (44%), Gaps = 41/360 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D T+ T+++ C G+ AL + M+ + D YS +I LC+ G + A
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ LF E+ EK G P +Y + C G+ A+R+LR +++R D L+
Sbjct: 316 QYLFSEMLEK-------GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLT 368
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ +I +EG +L ML R PD Y+ +I GF + ++ + + M
Sbjct: 369 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR----FDDAKHMF 424
Query: 185 KSSYLPKTSTWHSIL-----ARLLEKGFPHESARVTVMMLDRNI-RQNINLSTKSIELLF 238
P T+++I+ A+ +++G M L R I R+ + +T + L
Sbjct: 425 DLMASPDVVTFNTIIDVYCRAKRVDEG----------MQLLREISRRGLVANTTTYNTLI 474
Query: 239 GHG-----HRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHH 290
HG + + A ++ + + G C + ++ C+ KL EA L LF +
Sbjct: 475 -HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA--LELFEVIQMS 531
Query: 291 NVDIDLC--NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+D+D N +I G+C+ ++V EA+ L L G+ ++ N +++ + + +A
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 591
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 156/362 (43%), Gaps = 21/362 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P TFNTLI+ C G + EA + M + D +Y ++ +C+ GD A
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
L ++ E I +P Y I LC+ G A+ + +++++G + +
Sbjct: 281 LNLLSKMEETHI-------KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C G + + LL M+ R+ PDV ++ LI +++ K A + ++ML
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 185 KSSYLPKTSTWHSILARLLEKGF-PHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
P T T++S++ GF H M D ++ I++
Sbjct: 394 HRCIFPDTVTYNSMIY-----GFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRV 448
Query: 244 DKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
D+ +++ + ++G ++ C+ L A+ L + + D CN +
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508
Query: 301 ILGLCEINRVLEAFGLCYELVEKG-LHQELTCLNDLVTALEARGKVEEA--AFISKRIPG 357
+ G CE ++ EA L +E+++ + + N ++ + KV+EA F S I G
Sbjct: 509 LYGFCENEKLEEALEL-FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 358 LE 359
+E
Sbjct: 568 VE 569
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 9/241 (3%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SPD TFNT+I +C A +DE +++ + + A++ +Y+ LI C+ + + A+
Sbjct: 429 SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDPLSYM 126
LF E+ G P + + CE+ K +A + I M + D ++Y
Sbjct: 489 LFQEMISH-------GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+I G C+ + ++L + PDV+ Y+ +I GF K A KM +
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
+ P ST+++++ L+ G +S + M + + K + L G DK+
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA-FTIKMVADLITDGRLDKS 660
Query: 247 F 247
F
Sbjct: 661 F 661
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 12/170 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PDT T N L++ C L+EAL++FE ++ ++ D+ +Y+I+I +C+ D+A
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
LF L G +P +Y + C A + ++ G + D +
Sbjct: 557 WDLF-------CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNST 609
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDV----EIYDCLIDGFLQK 170
Y T+I G + G + EL+ M F D + D + DG L K
Sbjct: 610 YNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLDK 659
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 153/359 (42%), Gaps = 24/359 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEAL---------------KVFENMKNFQVTADSASYS 50
GF PD TFNTL+H C + EAL +F+ M +T +++
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFN 230
Query: 51 ILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERV 110
LI LC G +A L +++ K G +Y I +C+ G T+ A +
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGK-------GLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 111 LRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQ 169
L ++ + + D + Y +I C++G + + L ML + P+V Y+C+IDGF
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 170 KDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINL 229
+ A L M++ P T++++++ +++G E+ ++ ML R I +
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 230 STKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNH 289
I H D A + +L+ V ++ C+ ++ E +LL +
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMASPDV-VTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 290 HNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+ N +I G CE++ + A L E++ G+ + N L+ K+EEA
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 160/360 (44%), Gaps = 41/360 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D T+ T+++ C G+ AL + M+ + D YS +I LC+ G + A
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ LF E+ EK G P +Y + C G+ A+R+LR +++R D L+
Sbjct: 316 QYLFSEMLEK-------GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLT 368
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ +I +EG +L ML R PD Y+ +I GF + ++ + + M
Sbjct: 369 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR----FDDAKHMF 424
Query: 185 KSSYLPKTSTWHSIL-----ARLLEKGFPHESARVTVMMLDRNI-RQNINLSTKSIELLF 238
P T+++I+ A+ +++G M L R I R+ + +T + L
Sbjct: 425 DLMASPDVVTFNTIIDVYCRAKRVDEG----------MQLLREISRRGLVANTTTYNTLI 474
Query: 239 GHG-----HRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHH 290
HG + + A ++ + + G C + ++ C+ KL EA L LF +
Sbjct: 475 -HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA--LELFEVIQMS 531
Query: 291 NVDIDLC--NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+D+D N +I G+C+ ++V EA+ L L G+ ++ N +++ + + +A
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 591
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 156/362 (43%), Gaps = 21/362 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P TFNTLI+ C G + EA + M + D +Y ++ +C+ GD A
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
L ++ E I +P Y I LC+ G A+ + +++++G + +
Sbjct: 281 LNLLSKMEETHI-------KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C G + + LL M+ R+ PDV ++ LI +++ K A + ++ML
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 185 KSSYLPKTSTWHSILARLLEKGF-PHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
P T T++S++ GF H M D ++ I++
Sbjct: 394 HRCIFPDTVTYNSMIY-----GFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRV 448
Query: 244 DKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
D+ +++ + ++G ++ C+ L A+ L + + D CN +
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508
Query: 301 ILGLCEINRVLEAFGLCYELVEKG-LHQELTCLNDLVTALEARGKVEEAA--FISKRIPG 357
+ G CE ++ EA L +E+++ + + N ++ + KV+EA F S I G
Sbjct: 509 LYGFCENEKLEEALEL-FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 358 LE 359
+E
Sbjct: 568 VE 569
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 8/200 (4%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SPD TFNT+I +C A +DE +++ + + A++ +Y+ LI C+ + + A+
Sbjct: 429 SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDPLSYM 126
LF E+ G P + + CE+ K +A + I M + D ++Y
Sbjct: 489 LFQEMISH-------GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+I G C+ + ++L + PDV+ Y+ +I GF K A KM +
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601
Query: 187 SYLPKTSTWHSILARLLEKG 206
+ P ST+++++ L+ G
Sbjct: 602 GHEPDNSTYNTLIRGCLKAG 621
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 8/152 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PDT T N L++ C L+EAL++FE ++ ++ D+ +Y+I+I +C+ D+A
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
LF L G +P +Y + C A + ++ G + D +
Sbjct: 557 WDLF-------CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNST 609
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
Y T+I G + G + EL+ M F D
Sbjct: 610 YNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 157/384 (40%), Gaps = 50/384 (13%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SP+ TF L+ G +A K+F++M ++ + +Y+ILI LCQRG D A K
Sbjct: 195 SPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARK 254
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYM 126
LF E+ G+ P + ++ + C+ G+ +A +LR K G L Y
Sbjct: 255 LFYEMQTS-------GNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYS 307
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
++I G R Y +EL ML+++ PD+ +Y LI G + K A++ L M
Sbjct: 308 SLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSK 367
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P T +++++ L +G E + + M + + T I + +G +A
Sbjct: 368 GISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREA 427
Query: 247 FEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLL----------LFSLKNH---- 289
EI + K G + ++ LCK G+L EAR LL LF +H
Sbjct: 428 EEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNR 487
Query: 290 -------------------------HNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKG 324
+ DI N +I G C + A L L KG
Sbjct: 488 SFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKG 547
Query: 325 LHQELTCLNDLVTALEARGKVEEA 348
L + N L+ L G+ EEA
Sbjct: 548 LSPDSVTYNTLINGLHRVGREEEA 571
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 156/353 (44%), Gaps = 14/353 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
GG S D+ F LI ++ G ++A++ F MK F D +Y++++R + +
Sbjct: 121 GGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMM------R 174
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPL 123
E F F + K P ++ + L + G+T A+++ + RG + + +
Sbjct: 175 EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRV 234
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y +I G C+ G+ ++ +L M PD ++ L+DGF + + + A E L
Sbjct: 235 TYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLF 294
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
K ++ + S++ L ++ + ML +NI+ +I L T I+ L G
Sbjct: 295 EKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKI 354
Query: 244 DKAFEIVELLYKKG-----FCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
+ A +++ + KG +C V++ LC RG L E R L L + D
Sbjct: 355 EDALKLLSSMPSKGISPDTYCYN--AVIKALCGRGLLEEGRSLQLEMSETESFPDACTHT 412
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
+I +C V EA + E+ + G + N L+ L G+++EA +
Sbjct: 413 ILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLL 465
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 141/351 (40%), Gaps = 61/351 (17%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD CT LI S C G + EA ++F ++ + A+++ LI LC+ G+ +A L
Sbjct: 406 PDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLL 465
Query: 69 -----------------------FDELFEKEIVLCKF---------GSQPLAASYKPIFQ 96
FD + E +L + GS P SY +
Sbjct: 466 LHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLIN 525
Query: 97 YLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLP 155
C G A ++L + +G + D ++Y T+I G R G E ++L + + DF
Sbjct: 526 GFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKL--FYAKDDFRH 583
Query: 156 DVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVT 215
+Y L+ +K K L+A K YL K S A +E+ F
Sbjct: 584 SPAVYRSLMTWSCRKRKVLVAFNLWMK-----YLKKISCLDDETANEIEQCFKEGET--- 635
Query: 216 VMMLDRNIRQNINLSTKSIELLFG-----------HGHRDKAFEIVELLYKKGFCVKIEE 264
+R +R+ I L T+ EL G G +A + +L +K V
Sbjct: 636 ----ERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPS 691
Query: 265 VVQF---LCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLE 312
V+ LCKR +L A ++ L++L N+ + +CN ++ L E +E
Sbjct: 692 CVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSSLLESTEKME 742
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 124/285 (43%), Gaps = 56/285 (19%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
D G SPD ++N LI+ C AG++D ALK+ ++ ++ DS +Y+ LI L + G
Sbjct: 509 ADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGRE 568
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKA--------------- 107
++A KLF + K+ F P A Y+ + + C K A
Sbjct: 569 EEAFKLF---YAKD----DFRHSP--AVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLD 619
Query: 108 ----------------ERVLRQIMKRGT-QDPLS---YMTVIMGHCREGAYENGYELLIW 147
ER LR++++ T +D L+ Y ++G C+ G + L+++
Sbjct: 620 DETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEA--LMVF 677
Query: 148 MLRRDFLPDVEIYDC--LIDGFLQKDKPLLAMETLEKMLKSSY--LPKTSTWHSILARLL 203
+ R+ V C LI G ++++ A+E L +++ +P+ + +L+ LL
Sbjct: 678 SVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNY--LLSSLL 735
Query: 204 EKGFPHESARVTVMMLDRNIRQNINL-STKSIELLFGHGHRDKAF 247
E E + + +R R N+ S E+L H HR +
Sbjct: 736 ES---TEKMEIVSQLTNRMERAGYNVDSMLRFEILKYHRHRKQVL 777
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 4/240 (1%)
Query: 121 DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKP-LLAMET 179
D + +I + + G E E M D PDV Y+ ++ ++++ +LA
Sbjct: 126 DSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAV 185
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
+MLK + P T+ ++ L +KG ++ ++ M R I N T I L
Sbjct: 186 YNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQ 245
Query: 240 HGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL 296
G D A ++ + G V ++ CK G++ EA +LL K+ + +
Sbjct: 246 RGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRG 305
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIP 356
+++I GL R +AF L +++K + ++ L+ L GK+E+A + +P
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 156/379 (41%), Gaps = 29/379 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TFN +I C ++EA K+ M D +Y L+ LC+ G D A
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA 341
Query: 66 EKLFDELFEKEIVL-------------------------CKFGSQPLAASYKPIFQYLCE 100
+ LF + + EIV+ +G P +Y + +
Sbjct: 342 KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 101 HGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEI 159
G A VL + +G + + SY ++ G C+ G + Y +L M P+
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 160 YDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMML 219
++CLI F ++ + A+E +M + P T++S+++ L E + + M+
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Query: 220 DRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLP 276
+ N I G +A ++V + +G + +++ LC+ G++
Sbjct: 522 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVD 581
Query: 277 EARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLV 336
+AR L L++ H CN +I GLC V EA E+V +G ++ N L+
Sbjct: 582 KARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Query: 337 TALEARGKVEEAAFISKRI 355
L G++E+ + +++
Sbjct: 642 NGLCRAGRIEDGLTMFRKL 660
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/350 (18%), Positives = 140/350 (40%), Gaps = 45/350 (12%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P ++N ++ S A VF +M + ++ ++ ++++ C + D A L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMT 127
++ K G P + Y+ + L + + +A ++L ++ G D ++
Sbjct: 240 LRDM-------TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
VI+G C+ +++ ML R F PD Y L++G + + A + ++ K
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-- 350
Query: 188 YLPKTSTWHSILARLLEKG-FPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P+ +++++ + G A ++ M+ I ++ L++G+
Sbjct: 351 --PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNS---LIYGY------ 399
Query: 247 FEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCE 306
+K+G EV+ + +G P + + +D G C+
Sbjct: 400 -------WKEGLVGLALEVLHDMRNKGCKPNVYS---------YTILVD-------GFCK 436
Query: 307 INRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIP 356
+ ++ EA+ + E+ GL N L++A ++ EA I + +P
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 486
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 111/272 (40%), Gaps = 9/272 (3%)
Query: 82 FGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIM-GHCREGAYEN 140
+ +P SY + + L + A V ++ R L V+M C ++
Sbjct: 176 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDS 235
Query: 141 GYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILA 200
LL M + +P+ IY LI + ++ A++ LE+M +P T++ ++
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295
Query: 201 RLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYK--KGF 258
L + +E+A++ ML R + + L G D A +L Y+ K
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA---KDLFYRIPKPE 352
Query: 259 CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC--NAVILGLCEINRVLEAFGL 316
V ++ G+L +A K +L + + + D+C N++I G + V A +
Sbjct: 353 IVIFNTLIHGFVTHGRLDDA-KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 317 CYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+++ KG + LV GK++EA
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 161/348 (46%), Gaps = 12/348 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P + T N ++ G ++ A VF+ M V DS+SY +++ + G +A
Sbjct: 177 GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 236
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
++ + ++ G P A+ I LCE+G +A R+++ G + L +
Sbjct: 237 DRWLTGMIQR-------GFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLIN 289
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ ++I G C++G+ + +E+L M+R + P+V + LIDG ++ A K++
Sbjct: 290 FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLV 349
Query: 185 KS-SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+S +Y P T+ S++ ++ + + + M ++ + N+N T I G
Sbjct: 350 RSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSF 409
Query: 244 DKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
+A+E++ L+ +GF I + LCK+ + PEA +LL + D +
Sbjct: 410 GRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTIL 469
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
I C+ N + +A + + G ++ N L+ A + K++E+
Sbjct: 470 IQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 517
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 144/327 (44%), Gaps = 12/327 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D GF P+ F +LI C G++ +A ++ E M + +++ LI LC+RG +
Sbjct: 280 DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTE 339
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDP 122
KA +LF +L + +P +Y + C+ K +AE + ++ ++G +
Sbjct: 340 KAFRLFLKLVRSDTY------KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNV 393
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y T+I GHC+ G++ YEL+ M F+P++ Y+ ID +K + A E L K
Sbjct: 394 NTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNK 453
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
T+ ++ ++ +++ M ++ L+ I
Sbjct: 454 AFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKK 513
Query: 243 RDKAFEIVELLYKKGFCVKIEEVVQFL---CKRGKLPEARKLLLFSLKNHHNV-DIDLCN 298
++ + +L+ G E + CK G + A K ++K H V D
Sbjct: 514 MKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALK-YFHNMKRHGCVPDSFTYG 572
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGL 325
++I GLC+ + V EA L ++++GL
Sbjct: 573 SLISGLCKKSMVDEACKLYEAMIDRGL 599
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
+ GD GF P+ T+N I S C EA ++ + + AD +Y+ILI+ C++
Sbjct: 418 LMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQN 477
Query: 61 DYDKAEKLFDEL----FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK 116
D ++A F + FE ++ L + L A++ C K +++ER+ + ++
Sbjct: 478 DINQALAFFCRMNKTGFEADMRL----NNILIAAF-------CRQKKMKESERLFQLVVS 526
Query: 117 RG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLL 175
G +Y ++I +C+EG + + M R +PD Y LI G +K
Sbjct: 527 LGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDE 586
Query: 176 AMETLEKMLKSSYLPKTST 194
A + E M+ P T
Sbjct: 587 ACKLYEAMIDRGLSPPEVT 605
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 171/365 (46%), Gaps = 29/365 (7%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G PD T+N++++ C +G+ AL + M+ V AD +YS +I +LC+ G D
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A LF E+ K G + +Y + + LC+ GK +L+ ++ R +
Sbjct: 246 AAISLFKEMETK-------GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+++ ++ +EG + EL M+ R P++ Y+ L+DG+ +++ A L+
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 358
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN---INLSTKSIELLFG 239
M+++ P T+ S++ KG+ M + RNI + N T SI L+ G
Sbjct: 359 MVRNKCSPDIVTFTSLI-----KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI-LVQG 412
Query: 240 HGHRDK---AFEIVELLYKKGFCVKIEEVVQF------LCKRGKLPEARKLLLFSLKNHH 290
K A E+ + + G + +V+ + LC GKL +A ++ K+
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGV---LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 291 NVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAF 350
++ I + +I G+C+ +V +A+ L L KG+ + +++ L +G + EA
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 351 ISKRI 355
+ +++
Sbjct: 530 LLRKM 534
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 8/208 (3%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SPD TF +LI +C +D+ +KVF N+ + A++ +YSIL++ CQ G AE+
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
LF E+ G P +Y + LC++GK KA + + K + Y
Sbjct: 425 LFQEMVSH-------GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
T+I G C+ G E+ + L + + P+V Y +I G +K A L KM +
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 537
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARV 214
P T+++++ L G SA++
Sbjct: 538 GNAPNDCTYNTLIRAHLRDGDLTASAKL 565
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 170/370 (45%), Gaps = 16/370 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT TFNTLI G + EA+ + + M D +Y+ ++ +C+ GD A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP-LS 124
L ++ E+ + F +Y I LC G A + +++ +G + ++
Sbjct: 213 LDLLRKMEERNVKADVF-------TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +++ G C+ G + +G LL M+ R+ +P+V ++ L+D F+++ K A E ++M+
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
P T+++++ + E+ + +M+ +I T I+ D
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
++ + K+G V +VQ C+ GK+ A + LF H V D+ I
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE--LFQEMVSHGVLPDVMTYGI 443
Query: 302 L--GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLE 359
L GLC+ ++ +A + +L + + + ++ + GKVE+A + +P +
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP-CK 502
Query: 360 NLDRSVLSYS 369
+ +V++Y+
Sbjct: 503 GVKPNVMTYT 512
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 8/182 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+ L+ C G L++AL++FE+++ ++ Y+ +I +C+ G + A
Sbjct: 433 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
LF L CK G +P +Y + LC+ G +A +LR++ + G + +
Sbjct: 493 WNLFCSL------PCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I H R+G +L+ M F D +ID L K L L K
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGS 605
Query: 185 KS 186
KS
Sbjct: 606 KS 607
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 125/293 (42%), Gaps = 17/293 (5%)
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVL---RQIMKRGT 119
D A LF E+ S+PL S ++ +T++ VL +Q+ G
Sbjct: 70 DDAIALFQEMIR---------SRPLP-SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI 119
Query: 120 QDPLSYMTVIMG-HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME 178
+ + +++ CR Y +L +++ + PD ++ LI G + K A+
Sbjct: 120 AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV 179
Query: 179 TLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
+++M+++ P T++SI+ + G + + M +RN++ ++ + I+ L
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 239 GHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDID 295
G D A + + + KG V +V+ LCK GK + LL + ++
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299
Query: 296 LCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
N ++ + ++ EA L E++ +G+ + N L+ + ++ EA
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 171/408 (41%), Gaps = 56/408 (13%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+ ++I C A LDEA+++FE+++ + + +Y+ +I G +D+A
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
L + K GS P +Y I L + GK +A +V ++ K + +Y
Sbjct: 328 YSLLERQRAK-------GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTY 380
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+I CR G + +EL M + P+V + ++D + K A E+M
Sbjct: 381 NILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY 440
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
P T+ S++ L + G ++ +V MLD + R N + T I+ F HG ++
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500
Query: 246 AFEI-------------------VELLYKKGFCVKIEEVVQFLCKRGKLPEARKL----- 281
+I ++ ++K G K + + + R +P+AR
Sbjct: 501 GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIH 560
Query: 282 -------------LLFSLKNHHNV-DIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQ 327
L +S+K V D N VI G C+ +V +A+ L E+ KG
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Query: 328 ELTCLNDLVTALEARGKVEEAAFI-----SKRIPGLENLDRSVLSYSS 370
+ ++ L +++EA + SKRI + +V+ YSS
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI------ELNVVIYSS 662
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 170/352 (48%), Gaps = 13/352 (3%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
MK D +P+ T+N LI C AG LD A ++ ++M+ + + + +I++ LC+
Sbjct: 369 MKKDA--APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 426
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
D+A +F+E+ K +C P ++ + L + G+ A +V +++ +
Sbjct: 427 KLDEACAMFEEMDYK---VC----TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 121 -DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
+ + Y ++I G E+G+++ M+ ++ PD+++ + +D + +P
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
E++ ++P ++ ++ L++ GF +E+ + M ++ + I+
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 240 HGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL 296
G +KA++++E + KGF V V+ L K +L EA L + +++ +
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+++I G ++ R+ EA+ + EL++KGL L N L+ AL ++ EA
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEA 711
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 166/384 (43%), Gaps = 31/384 (8%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+PD TF +LI G +D+A KV+E M + +S Y+ LI+N G + K
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDPLSYM 126
++ ++ + C Q L +F+ G+ K + +I +R D SY
Sbjct: 504 IYKDMINQN---CSPDLQLLNTYMDCMFK----AGEPEKGRAMFEEIKARRFVPDARSYS 556
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+I G + G YEL M + + D Y+ +IDGF + K A + LE+M
Sbjct: 557 ILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK 616
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
+ P T+ S++ L + E+ + + I N+ + + I+ G D+A
Sbjct: 617 GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEA 676
Query: 247 FEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLF-SLKNHHNVDIDLCNAVIL 302
+ I+E L +KG + ++ L K ++ EA L+ F S+K + +++
Sbjct: 677 YLILEELMQKGLTPNLYTWNSLLDALVKAEEINEA--LVCFQSMKELKCTPNQVTYGILI 734
Query: 303 -GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKR------- 354
GLC++ + +AF E+ ++G+ +++ L G + EA + R
Sbjct: 735 NGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV 794
Query: 355 ---------IPGLENLDRSVLSYS 369
I GL N +R++ ++S
Sbjct: 795 PDSACYNAMIEGLSNGNRAMDAFS 818
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 154/351 (43%), Gaps = 15/351 (4%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SPD NT + AG ++ +FE +K + D+ SYSILI L + G ++ +
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYM 126
LF + E+ VL +Y + C+ GK KA ++L ++ +G + + +Y
Sbjct: 574 LFYSMKEQGCVL-------DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+VI G + + Y L + +V IY LIDGF + + A LE++++
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P TW+S+L L++ +E+ M + N I L +KA
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 247 FEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
F + + K+G + ++ L K G + EA L N D NA+I G
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 304 LCEINRVLEAFGLCYELVEKGL--HQELTCLNDLVTALEARGKVEEAAFIS 352
L NR ++AF L E +GL H + TC+ L+ L +E+AA +
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLPIHNK-TCVV-LLDTLHKNDCLEQAAIVG 855
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 142/359 (39%), Gaps = 61/359 (16%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ P F TLI G +D AL + + MK+ + AD Y++ I + + G D A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK-RGTQDPLS 124
K F E+ G +P +Y + LC+ + +A + + K R +
Sbjct: 258 WKFFHEIEAN-------GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+IMG+ G ++ Y LL + +P V Y+C++ + K A++ E+M
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK 370
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K + P ST++ + I++L G D
Sbjct: 371 KDA-APNLSTYNIL-----------------------------------IDMLCRAGKLD 394
Query: 245 KAFEIVELLYKKGFCVKIEEV---VQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN--- 298
AFE+ + + K G + V V LCK KL EA + +D +C
Sbjct: 395 TAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF-------EEMDYKVCTPDE 447
Query: 299 ----AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISK 353
++I GL ++ RV +A+ + ++++ L+ G+ E+ I K
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 82/206 (39%), Gaps = 29/206 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P T+ ++I LDEA +FE K+ ++ + YS LI + G D+A
Sbjct: 617 GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEA 676
Query: 66 EKLFDELFEK-----------------------EIVLC-----KFGSQPLAASYKPIFQY 97
+ +EL +K E ++C + P +Y +
Sbjct: 677 YLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILING 736
Query: 98 LCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
LC+ K KA +++ K+G + +SY T+I G + G L +PD
Sbjct: 737 LCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPD 796
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEK 182
Y+ +I+G ++ + A E+
Sbjct: 797 SACYNAMIEGLSNGNRAMDAFSLFEE 822
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 89/224 (39%), Gaps = 3/224 (1%)
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+++G + GY+++ M + F P Y LI F + + + ++M +
Sbjct: 139 MVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG 198
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
Y P + +++ ++G + + M ++ +I L I+ G D A+
Sbjct: 199 YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAW 258
Query: 248 EIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
+ + G V ++ LCK +L EA ++ KN N +I+G
Sbjct: 259 KFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGY 318
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+ EA+ L KG + N ++T L GKV+EA
Sbjct: 319 GSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEA 362
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 167/371 (45%), Gaps = 12/371 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GFSP+ + TLI C G +++A +F M + A+ +Y++LI L + G +
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQG 252
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
++++++ E G P +Y + LC+ G+T+ A +V ++ +RG + ++
Sbjct: 253 FEMYEKMQED-------GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVT 305
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G CRE +++ M P++ Y+ LIDGF K A+ +
Sbjct: 306 YNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLK 365
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
P T++ +++ KG +A++ M +R I+ + T I+ + +
Sbjct: 366 SRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNME 425
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
KA ++ + + G + ++ C +G++ EA +L ++ + + + N +I
Sbjct: 426 KAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMI 485
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA-FISKRIPGLEN 360
LG C+ A L E+ EK L + ++ L K +EA + K I +
Sbjct: 486 LGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGID 545
Query: 361 LDRSVLSYSSK 371
S+LS S+
Sbjct: 546 PSTSILSLISR 556
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 130/286 (45%), Gaps = 12/286 (4%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M+ DG F P+ T+N +++ C G +A +VF+ M+ V+ + +Y+ LI LC+
Sbjct: 259 MQEDGVF-PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREM 317
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
++A K+ D++ G P +Y + C GK KA + R + RG
Sbjct: 318 KLNEANKVVDQMKSD-------GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS 370
Query: 121 DPL-SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
L +Y ++ G CR+G +++ M R P Y LID F + D A++
Sbjct: 371 PSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL 430
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
M + +P T+ ++ KG +E++R+ M+++N N + I
Sbjct: 431 RLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCK 490
Query: 240 HGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLL 282
G +A ++++ + +K + +++ LCK K EA +L+
Sbjct: 491 EGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLV 536
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 31/230 (13%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
MK DG +P+ T+NTLI C G L +AL + ++K+ ++ +Y+IL+ C++G
Sbjct: 329 MKSDG-INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Query: 61 DYDKAEKLFDELFEKEIVLCK----------------------------FGSQPLAASYK 92
D A K+ E+ E+ I K G P +Y
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYS 447
Query: 93 PIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRR 151
+ C G+ +A R+ + ++++ + + + Y T+I+G+C+EG+ +LL M +
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507
Query: 152 DFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILAR 201
+ P+V Y +I+ ++ K A +EKM+ S P TS S+++R
Sbjct: 508 ELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSIL-SLISR 556
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 129/310 (41%), Gaps = 10/310 (3%)
Query: 49 YSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAE 108
Y ++I + Q + + F+E+ + V P + + + ++ +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFV-------PGSNCFNYLLTFVVGSSSFNQWW 149
Query: 109 RVLRQIMKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFL 168
+ + D S+ +I G C G E ++LLI + F P+V IY LIDG
Sbjct: 150 SFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCC 209
Query: 169 QKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNIN 228
+K + A + +M K + T+ ++ L + G + + M + + N+
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269
Query: 229 LSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFS 285
+ L G AF++ + + ++G I ++ LC+ KL EA K++
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 286 LKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKV 345
+ N ++ N +I G C + ++ +A LC +L +GL L N LV+ +G
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389
Query: 346 EEAAFISKRI 355
AA + K +
Sbjct: 390 SGAAKMVKEM 399
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 116/259 (44%), Gaps = 14/259 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD+ T+ TLI C G +DEA K+F M +Y+ LI LC + D+A
Sbjct: 187 GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEA 246
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ +E+ K G +P +Y + LC+ G++ +A + +M RG + + ++
Sbjct: 247 MRYLEEMKSK-------GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVT 299
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G C+E + ELL M + PD +Y +I GF K A L++M+
Sbjct: 300 YTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMI 359
Query: 185 KSSYLPKTSTWH------SILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
P TW+ + + R L +P + + + M R I + ++ L
Sbjct: 360 LGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLC 419
Query: 239 GHGHRDKAFEIVELLYKKG 257
G KA ++V+ + G
Sbjct: 420 KKGEFQKAVQLVDEIVTDG 438
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 133/288 (46%), Gaps = 18/288 (6%)
Query: 6 GFSPDTCTFNTLIHSHC-SAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G P + N LI + C + G +D LK+F M DS +Y LI LC+ G D+
Sbjct: 151 GLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDE 210
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPL 123
A+KLF E+ EK+ P +Y + LC +A R L ++ +G + +
Sbjct: 211 AKKLFTEMVEKDCA-------PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVF 263
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y +++ G C++G EL M+ R P++ Y LI G ++ K A+E L++M
Sbjct: 264 TYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRM 323
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN---INLSTK-SIELLFG 239
P + +++ E+A M+ I N N+ K S E++ G
Sbjct: 324 NLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRG 383
Query: 240 --HGHRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLL 282
+ +AF + + +G V++ E +V+ LCK+G+ +A +L+
Sbjct: 384 LCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLV 431
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 140/333 (42%), Gaps = 20/333 (6%)
Query: 29 EALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLA 88
++L+VF MK+F +Y ++ L + + A K + + E G P
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMRE-------IGLPPTV 156
Query: 89 ASYKPIFQYLCEHGKTRKAE-RVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLI 146
AS + + LC + T A ++ ++ KRG D +Y T+I G CR G + +L
Sbjct: 157 ASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFT 216
Query: 147 WMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKG 206
M+ +D P V Y LI+G AM LE+M P T+ S++ L + G
Sbjct: 217 EMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDG 276
Query: 207 FPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIE 263
++ + MM+ R R N+ T I L +A E+++ + +G
Sbjct: 277 RSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYG 336
Query: 264 EVVQFLCKRGKLPEARKLL-------LFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGL 316
+V+ C K EA L + + N+ + N V+ GLC N AF L
Sbjct: 337 KVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCA-NYPSRAFTL 395
Query: 317 CYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
+ +G+ E+ L LV L +G+ ++A
Sbjct: 396 YLSMRSRGISVEVETLESLVKCLCKKGEFQKAV 428
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 106/255 (41%), Gaps = 49/255 (19%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+P T+ +LI+ C + N+DEA++ E MK+ + + +YS L+ LC+ G +A +
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
LF+ + + G +P +Y + LC+ K ++A +L ++ +G + D Y
Sbjct: 284 LFEMMMAR-------GCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYG 336
Query: 127 TVIMGHC-----REGAY------------------------------------ENGYELL 145
VI G C RE A + L
Sbjct: 337 KVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLY 396
Query: 146 IWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEK 205
+ M R +VE + L+ +K + A++ +++++ +P TW ++ L+K
Sbjct: 397 LSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDK 456
Query: 206 GFPHESARVTVMMLD 220
E++ + LD
Sbjct: 457 TIVGEASDTLLRDLD 471
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 146/327 (44%), Gaps = 12/327 (3%)
Query: 4 DG-GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
DG GF P+ +NT+I+ C +L+ AL+VF M+ + AD+ +Y+ LI L G +
Sbjct: 176 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQD 121
A +L ++ +++I P + + + G +A + +++++R +
Sbjct: 236 TDAARLLRDMVKRKI-------DPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN 288
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+Y ++I G C G + + M+ + PDV Y+ LI GF + + M+
Sbjct: 289 VFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 348
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
+M + T+++++ + G + + +V M+D + +I ++ L +G
Sbjct: 349 EMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNG 408
Query: 242 HRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
+KA +VE L K V I ++Q LC+ KL EA L + D
Sbjct: 409 KIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYI 468
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGL 325
+I GLC EA LC + E G
Sbjct: 469 TMISGLCRKGLQREADKLCRRMKEDGF 495
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D T+NTLIH +C AG L+ A KVF M + V+ D +Y+IL+ LC G +KA
Sbjct: 354 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ ++L + E+ +Y I Q LC K ++A + R + ++G + D ++
Sbjct: 414 LVMVEDLQKSEM-------DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 466
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYD 161
Y+T+I G CR+G +L M F+P IYD
Sbjct: 467 YITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 8/195 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+NTLI C + +++ +K+F M + D+ +Y+ LI CQ G + A
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+K+F+ + + C G P +Y + LC +GK KA ++ + K D ++
Sbjct: 379 QKVFNRMVD-----C--GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT 431
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G CR + + L + R+ PD Y +I G +K A + +M
Sbjct: 432 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491
Query: 185 KSSYLPKTSTWHSIL 199
+ ++P + L
Sbjct: 492 EDGFMPSERIYDETL 506
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 157/390 (40%), Gaps = 48/390 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G S D +F LIH C L AL + M + L+ CQ + +A
Sbjct: 109 GISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEA 168
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L D + FG P Y + LC++ A V + K+G + D ++
Sbjct: 169 VSLVDSMD-------GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVT 221
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G G + + LL M++R P+V + LID F+++ L A ++M+
Sbjct: 222 YNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMI 281
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR- 243
+ S +P T++S++ G ++ + +M+ + ++ ++ ++ F R
Sbjct: 282 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV-VTYNTLITGFCKSKRV 340
Query: 244 -DKAFEIVELLYK-------------KGFC------------------------VKIEEV 265
D E+ Y+ G+C V +
Sbjct: 341 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400
Query: 266 VQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGL 325
+ LC GK+ +A ++ K+ +VDI N +I GLC +++ EA+ L L KG+
Sbjct: 401 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Query: 326 HQELTCLNDLVTALEARGKVEEAAFISKRI 355
+ +++ L +G EA + +R+
Sbjct: 461 KPDAIAYITMISGLCRKGLQREADKLCRRM 490
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 149/349 (42%), Gaps = 15/349 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PD T +L++ C + +A+ + + M D +Y+ +I +LC+ + A
Sbjct: 150 GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
F E+ K G +P +Y + LC + A R+L ++K+ T + ++
Sbjct: 210 FDFFKEIERK-------GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ + G EL M+R PD+ Y LI+G D+ A + + M+
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
L ++++++ + + ++ M R + N I+ F G D
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN--A 299
KA E + G I ++ LC G+L +A L++F +D+D+
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA--LVIFEDMQKREMDLDIVTYTT 440
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
VI G+C+ +V EA+ L L KGL ++ +++ L +G + E
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEV 489
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 18/187 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +T T+NTLI AG++D+A + F M F ++ D +Y+IL+ LC G+ +KA
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+F+++ ++E+ L +Y + + +C+ GK +A + + +G + D ++
Sbjct: 420 LVIFEDMQKREMDL-------DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDC-LIDGFLQKDKPLLAMETLEKM 183
Y T++ G C +G L M + + + DC L DG + L+ E ++KM
Sbjct: 473 YTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN----DCTLSDGDIT-----LSAELIKKM 523
Query: 184 LKSSYLP 190
L Y P
Sbjct: 524 LSCGYAP 530
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 165/359 (45%), Gaps = 13/359 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PD +++T+I+ AG LD+AL++F+ M V D Y+ILI + D+ A
Sbjct: 179 GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTA 238
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+L+D L E V P ++ + L + G+ ++ ++ + + D +
Sbjct: 239 MELWDRLLEDSSVY------PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYT 292
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I G C G + + + R DV Y+ ++ GF + K ++E L +++
Sbjct: 293 YSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLE-LWRIM 351
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ +++ ++ LLE G E+ + +M + + I L +G+ +
Sbjct: 352 EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVN 411
Query: 245 KAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
KA +++ + G + + ++ LCK+ +L EA L+ K+ ++ +CNA+I
Sbjct: 412 KALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALI 471
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLEN 360
GL +R+ EA E+ + G + N L+ L GK EA+ K + LEN
Sbjct: 472 GGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEM--LEN 528
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 150/351 (42%), Gaps = 10/351 (2%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D P+ T N +I G +D+ LK++E MK + D +YS LI LC G+ D
Sbjct: 248 DSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVD 307
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
KAE +F+EL E++ + +Y + C GK +++ + R + + + + +
Sbjct: 308 KAESVFNELDERK-------ASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV 360
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
SY +I G G + + M + + D Y I G A+ ++++
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 420
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
S + SI+ L +K E++ + M + N ++ I L
Sbjct: 421 ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480
Query: 244 DKAFEIVELLYKKG---FCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
+A + + K G V ++ LCK GK EA + L+N D+ + +
Sbjct: 481 GEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 540
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
+ GLC ++ A L ++ ++ GL ++ N L+ L + GK+++A +
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTV 591
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 150/355 (42%), Gaps = 48/355 (13%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P ++NTL+++ A + +F + V + +Y++LI+ C++ +++KA
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
D ++++ G +P SY + L + GK A + ++ +RG
Sbjct: 169 RGFLDWMWKE-------GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVA----- 216
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
PDV Y+ LIDGFL++ AME +++L+
Sbjct: 217 -----------------------------PDVTCYNILIDGFLKEKDHKTAMELWDRLLE 247
Query: 186 -SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
SS P T + +++ L + G + ++ M +++ + I L G+ D
Sbjct: 248 DSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVD 307
Query: 245 KAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHN-VDIDLCNAV 300
KA + L ++ + + ++ C+ GK+ E+ L L+ + H N V+I N +
Sbjct: 308 KAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKES--LELWRIMEHKNSVNIVSYNIL 365
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
I GL E ++ EA + + KG + T + L G V +A + + +
Sbjct: 366 IKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 420
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 10/255 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G++ D T+ IH C G +++AL V + +++ D +Y+ +I LC++ ++A
Sbjct: 389 GYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEA 448
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
L E+ K G + + + L + +A LR++ K G + + S
Sbjct: 449 SNLVKEM-------SKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVS 501
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C+ G + + ML + PD++ Y L+ G + K LA+E + L
Sbjct: 502 YNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFL 561
Query: 185 KSSYLPKTSTWHSILAR-LLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+S L H+IL L G ++ V M RN N+ +E F G
Sbjct: 562 QSG-LETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDS 620
Query: 244 DKAFEIVELLYKKGF 258
++A I +YK G
Sbjct: 621 NRATVIWGYMYKMGL 635
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 9/200 (4%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G G P ++N LI C AG EA + M D +YSIL+ LC+
Sbjct: 491 GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKI 550
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQD 121
D A +L+ + + G + + + LC GK A V+ + R T +
Sbjct: 551 DLALELWHQFLQS-------GLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
++Y T++ G + G + +M + PD+ Y+ ++ G AME +
Sbjct: 604 LVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFD 663
Query: 182 KMLKSSYLPKTSTWHSILAR 201
P TW +IL R
Sbjct: 664 DARNHGIFPTVYTW-NILVR 682
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 173/392 (44%), Gaps = 41/392 (10%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + T+N+LI+ + G+++ +V M V+ + +Y+ LI+ C++G ++A
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
E +F+ L EK++V Q + Y + C G+ R A RV +++ G + +
Sbjct: 316 EHVFELLKEKKLV----ADQHM---YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTI 368
Query: 126 M-TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
++I G+C+ G ++ M PD Y+ L+DG+ + A++ ++M
Sbjct: 369 CNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMC 428
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ +P T++ +L G H+ + MML R + + + +E LF G +
Sbjct: 429 QKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFN 488
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A ++ E + +G + + ++ LCK K+ EA+++L NV+I C +
Sbjct: 489 EAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEIL-------DNVNIFRCKPAV 541
Query: 302 L-------GLCEINRVLEAFGLCYELVEKGL----------------HQELTCLNDLVTA 338
G ++ + EAF + + KG+ ++ L + DLV
Sbjct: 542 QTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIE 601
Query: 339 LEARGKVEEAAFISKRIPGLENLDRSVLSYSS 370
L ARG A I G N+ +Y++
Sbjct: 602 LRARGLTPTVATYGALITGWCNIGMIDKAYAT 633
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 154/364 (42%), Gaps = 47/364 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +T N+LI+ +C +G L EA ++F M ++ + D +Y+ L+ C+ G D+A
Sbjct: 361 GVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 420
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
KL D++ +KE+V P +Y + + G + + ++KRG D +S
Sbjct: 421 LKLCDQMCQKEVV-------PTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEIS 473
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
T++ + G + +L +L R L D + +I G + +K A E L+ +
Sbjct: 474 CSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVN 533
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
P T+ ++ + G E+ V M + I I + I F + H +
Sbjct: 534 IFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLN 593
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
K ++V IE L RG P + A+I G
Sbjct: 594 KVADLV-----------IE-----LRARGLTPT----------------VATYGALITGW 621
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI-------PG 357
C I + +A+ C+E++EKG+ + + + +L K++EA + ++I PG
Sbjct: 622 CNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPG 681
Query: 358 LENL 361
++L
Sbjct: 682 YQSL 685
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 91/431 (21%), Positives = 172/431 (39%), Gaps = 85/431 (19%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENM----------------KNFQ------ 41
D PD T+NTL+ +C AG +DEALK+ + M K +
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFH 453
Query: 42 -------------VTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLA 88
V AD S S L+ L + GD+++A KL++ + + G
Sbjct: 454 DVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLAR-------GLLTDT 506
Query: 89 ASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDPLSYMTVIMGHCREGAYENGYELLIW 147
+ + LC+ K +A+ +L + + R +Y + G+ + G + + + +
Sbjct: 507 ITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEY 566
Query: 148 MLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGF 207
M R+ P +E+Y+ LI G + + + ++ P +T+ +++ G
Sbjct: 567 MERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGM 626
Query: 208 PHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA---------FEIVELLYK--K 256
++ M+++ I N+N+ +K LF D+A F+++ Y+ K
Sbjct: 627 IDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLK 686
Query: 257 GF-------CVKIEEV-----------------------VQFLCKRGKLPEARKLLLFSL 286
F C+K +++ + LCK GKL +ARKL L
Sbjct: 687 EFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLL 746
Query: 287 KNHHNVDIDLCNAVILGLCEI-NRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKV 345
+ + + +++ C I + +AF L E+ KG+ + N L+ L G V
Sbjct: 747 SSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNV 806
Query: 346 EEAAFISKRIP 356
+ A + ++P
Sbjct: 807 DRAQRLLHKLP 817
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 148/323 (45%), Gaps = 10/323 (3%)
Query: 30 ALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAA 89
AL V++ M +F+V+ D + SI++ C+ G+ DKA +F KE G +
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKA-----MVFAKE-TESSLGLELNVV 262
Query: 90 SYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWM 148
+Y + G RVLR + +RG +++ ++Y ++I G+C++G E + +
Sbjct: 263 TYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELL 322
Query: 149 LRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFP 208
+ + D +Y L+DG+ + + A+ + M++ T+ +S++ + G
Sbjct: 323 KEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQL 382
Query: 209 HESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---V 265
E+ ++ M D +++ + + ++ G+ D+A ++ + + +K + +
Sbjct: 383 VEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNIL 442
Query: 266 VQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGL 325
++ + G + L LK N D C+ ++ L ++ EA L ++ +GL
Sbjct: 443 LKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGL 502
Query: 326 HQELTCLNDLVTALEARGKVEEA 348
+ LN +++ L KV EA
Sbjct: 503 LTDTITLNVMISGLCKMEKVNEA 525
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFEN-MKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
P+ +N I C AG L++A K+F + + + + D +Y+ILI GD +KA
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYM 126
L DE+ K I+ P +Y + + LC+ G +A+R+L ++ ++G T + ++Y
Sbjct: 777 LRDEMALKGII-------PNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYN 829
Query: 127 TVIMGHCREG 136
T+I G + G
Sbjct: 830 TLIDGLVKSG 839
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 7/112 (6%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
F PD T+ LIH AG++++A + + M + + +Y+ LI+ LC+ G+ D+A+
Sbjct: 751 FIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQ 810
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
+L +L +K G P A +Y + L + G +A R+ +++++G
Sbjct: 811 RLLHKLPQK-------GITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 139/283 (49%), Gaps = 15/283 (5%)
Query: 7 FSPDTCTFNTLIHSHCS-AGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
F+P N ++ S G L +A ++F++ + V ++ SY++L++ C D A
Sbjct: 150 FTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIA 209
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+LF ++ E+++V P SYK + Q C G+ A +L ++ +G D LS
Sbjct: 210 YQLFGKMLERDVV-------PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLS 262
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T++ CR+ Y+LL M + PD+ Y+ +I GF ++D+ + A + L+ ML
Sbjct: 263 YTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDML 322
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P + ++ +++ L ++G E + M+ + + ++S ++ G +
Sbjct: 323 SNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVE 382
Query: 245 KAFEIVELLYKKGFCV---KIEEVVQFLCKRGKLPEARKLLLF 284
+A ++VE++ K G + E V+ +C E+ K+ LF
Sbjct: 383 EACDVVEVVMKNGETLHSDTWEMVIPLICNED---ESEKIKLF 422
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 118/265 (44%), Gaps = 33/265 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+T ++N L+ + C +L A ++F M V D SY ILI+ C++G + A
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 66 EKLFDELFEKEIV-------------------------LCKF---GSQPLAASYKPIFQY 97
+L D++ K V LC+ G P Y +
Sbjct: 245 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 304
Query: 98 LCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
C + A +VL ++ G + + +SY T+I G C +G ++ G + L M+ + F P
Sbjct: 305 FCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 364
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
+ +CL+ GF K A + +E ++K+ + TW ++ + + ES ++ +
Sbjct: 365 FSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNED---ESEKIKL 421
Query: 217 MMLDRNIRQNINLSTKSIELLFGHG 241
+ D +++ I T+ +++ G G
Sbjct: 422 FLED-AVKEEITGDTRIVDVGIGLG 445
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 109/284 (38%), Gaps = 34/284 (11%)
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEH-GKTRKAERVLRQIMKRGTQ-DPLS 124
KL +++ + +F P I L H G +KA + + G + S
Sbjct: 133 KLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRS 192
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ C Y+L ML RD +PDV+ Y LI GF +K + AME L+ ML
Sbjct: 193 YNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDML 252
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
++P ++ ++L L K E+ ++ M + ++
Sbjct: 253 NKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDL----------------- 295
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
V ++ C+ + +ARK+L L N + + +I GL
Sbjct: 296 ---------------VHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGL 340
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
C+ E E++ KG + N LV + GKVEEA
Sbjct: 341 CDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 384
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 158/355 (44%), Gaps = 11/355 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+N +I +C ++EA+++ E+M + D SY ++ LC+ +
Sbjct: 307 GIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEV 366
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L ++ ++ G P +Y + L +H +A L+ ++G + D L
Sbjct: 367 RDLMKKMAKEH------GLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLG 420
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLP-DVEIYDCLIDGFLQKDKPLLAMETLEKM 183
Y ++ C+EG +L+ ML + P DV Y +++GF + + A + L+ M
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVM 480
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ P T ++ ++L + G E+ + M + N + + L G
Sbjct: 481 HTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKL 540
Query: 244 DKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
+A ++V + KGF V+I ++Q LC+ G+ EARK + L +++ V
Sbjct: 541 SEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTV 600
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
I G C+ + + A + ++ H ++ LV L +G++ EA + K++
Sbjct: 601 IHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKM 655
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 152/355 (42%), Gaps = 18/355 (5%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M + G PD T+NTLIH + DEAL ++ + D YS ++ LC+ G
Sbjct: 373 MAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEG 432
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
+A+ L +E+ L K P +Y + C G+ KA+++L Q+M
Sbjct: 433 RMSEAKDLINEM------LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLL-QVMHTHGH 485
Query: 121 DP--LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME 178
P +SY ++ G CR G E++ + P+ Y ++ G ++ K A +
Sbjct: 486 KPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACD 545
Query: 179 TLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
+ +M+ + P + +L L G HE+ + L++ N+ T I
Sbjct: 546 VVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFC 605
Query: 239 GHGHRDKAFEIVELLY---KKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDID 295
+ D A +++ +Y K +V L K+G++ EA +L+ L H +D
Sbjct: 606 QNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKML--HKGIDPT 663
Query: 296 LCN--AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
VI C++ +V + + +++ + + T N ++ L GK+EEA
Sbjct: 664 PVTYRTVIHRYCQMGKVDDLVAILEKMISR--QKCRTIYNQVIEKLCVLGKLEEA 716
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 148/350 (42%), Gaps = 9/350 (2%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M G PD T+ +++ C G +D+A K+ + M ++ SY+ L+ +C+ G
Sbjct: 444 MLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTG 503
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT- 119
+A ++ + E P + +Y I L GK +A V+R+++ +G
Sbjct: 504 KSLEAREMMNMSEE-------HWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFF 556
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
P+ ++ CR+G + + L + +V + +I GF Q D+ A+
Sbjct: 557 PGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSV 616
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
L+ M + T+ +++ L +KG E+ + ML + I I
Sbjct: 617 LDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQ 676
Query: 240 HGHRDKAFEIVELLYKKGFCVKI-EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
G D I+E + + C I +V++ LC GKL EA LL L+ D C
Sbjct: 677 MGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCY 736
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
A++ G + L A+ + + + L ++ L L +GKV+EA
Sbjct: 737 ALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEA 786
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 115/253 (45%), Gaps = 10/253 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P N L+ S C G EA K E N + +++ +I CQ + D A
Sbjct: 554 GFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAA 613
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ D+++ +Y + L + G+ +A ++++++ +G P++
Sbjct: 614 LSVLDDMY-------LINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVT 666
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y TVI +C+ G ++ +L M+ R IY+ +I+ K A L K+L
Sbjct: 667 YRTVIHRYCQMGKVDDLVAILEKMISRQKCR--TIYNQVIEKLCVLGKLEEADTLLGKVL 724
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+++ T ++++ L+KG P + +V M +RN+ ++ + K + L G D
Sbjct: 725 RTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVD 784
Query: 245 KAFEIVELLYKKG 257
+A +++ L ++G
Sbjct: 785 EADKLMLRLVERG 797
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 106/254 (41%), Gaps = 8/254 (3%)
Query: 102 GKTRKAERVLRQIMKRGTQDP--LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEI 159
G+ R A +VL +M+R +P L T I R E L M +P+V
Sbjct: 256 GQLRDALKVL-TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVT 314
Query: 160 YDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLL-EKGFPHESARVTVMM 218
Y+C+I G+ + A+E LE M LP ++++I+ L EK + M
Sbjct: 315 YNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMA 374
Query: 219 LDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVK---IEEVVQFLCKRGKL 275
+ + + I +L H H D+A ++ +KGF + +V LCK G++
Sbjct: 375 KEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRM 434
Query: 276 PEARKLLLFSL-KNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLND 334
EA+ L+ L K H D+ AV+ G C + V +A L + G
Sbjct: 435 SEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTA 494
Query: 335 LVTALEARGKVEEA 348
L+ + GK EA
Sbjct: 495 LLNGMCRTGKSLEA 508
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 11/209 (5%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
+KG G P T +N LI ++C G +D+ + E M+ + D +Y+ LI LC+ G
Sbjct: 392 VKGQGAV-PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
+ + A+KLFD+L K + P ++ + + C G++RKA +L+++ K G +
Sbjct: 451 NIEAAKKLFDQLTSKGL--------PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502
Query: 121 DP-LSYMTVIMGHCREGAYENGYELLIWMLR-RDFLPDVEIYDCLIDGFLQKDKPLLAME 178
L+Y V+ G+C+EG + + M + R +V Y+ L+ G+ QK K A
Sbjct: 503 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562
Query: 179 TLEKMLKSSYLPKTSTWHSILARLLEKGF 207
L +ML+ +P T+ + ++++GF
Sbjct: 563 LLNEMLEKGLVPNRITYEIVKEEMVDQGF 591
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SP+ TFN LI NL ++KVF+ M + V + SY+ LI LC G +A
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAIS 352
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS--Y 125
+ D++ G QP +Y + C++ ++A + + +G P + Y
Sbjct: 353 MRDKMVSA-------GVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV-PTTRMY 404
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+I +C+ G ++G+ L M R +PDV Y+CLI G L ++ + A + L L
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG-LCRNGNIEAAKKLFDQLT 463
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESA 212
S LP T+H ++ KG ++A
Sbjct: 464 SKGLPDLVTFHILMEGYCRKGESRKAA 490
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 153/354 (43%), Gaps = 22/354 (6%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQ---RGDYDKA 65
P+ TFN +I++ C G +++A V E+MK + + + SY+ LI C+ G KA
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKA 280
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ + E+ E ++ P ++ + + + +V ++++ + + + +S
Sbjct: 281 DAVLKEMVENDV-------SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I G C G + M+ P++ Y+ LI+GF + D A++ +
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+P T ++ ++ + G + + M I ++ I L +G+ +
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453
Query: 245 KAFEIVELLYKKGF--CVKIEEVVQFLCKRGKLPEARKLL----LFSLKNHHNVDIDLCN 298
A ++ + L KG V +++ C++G+ +A LL LK H N
Sbjct: 454 AAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLT----YN 509
Query: 299 AVILGLCEINRVLEAFGLCYEL-VEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
V+ G C+ + A + ++ E+ L + N L+ +GK+E+A +
Sbjct: 510 IVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANML 563
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 129/281 (45%), Gaps = 17/281 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D P+ ++N+LI+ C+ G + EA+ + + M + V + +Y+ LI C+
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 383
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
+A +F + + G+ P Y + C+ GK + ++ + G D
Sbjct: 384 EALDMFGSVKGQ-------GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y +I G CR G E +L + + LPD+ + L++G+ +K + A L++
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKE 495
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M K P+ T++ ++ ++G + + M ++ R +N+++ ++ LL G+
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM-EKERRLRMNVASYNV-LLQGYSQ 553
Query: 243 RDK---AFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPE 277
+ K A ++ + +KG + E V + + +G +P+
Sbjct: 554 KGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 8/203 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T++ +I S C +G +A ++ +M Q+ D ++S LI L + G
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
+AE+++ ++ + I P +Y + C+ + A+R+L + + + D
Sbjct: 164 EAEEIYGDMLRRGIF-------PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDV 216
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+++ T+I G+C+ +NG E+ M RR + + Y LI GF Q A + L
Sbjct: 217 VTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNV 276
Query: 183 MLKSSYLPKTSTWHSILARLLEK 205
M+ S P T+ S+LA L K
Sbjct: 277 MISSGVAPNYITFQSMLASLCSK 299
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 139/326 (42%), Gaps = 15/326 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TF TL++ C G + +AL + + M V Y +I LC+ GD + A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRM----VEEGHQPYGTIINGLCKMGDTESA 60
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
L ++ E I + Y I LC+ G A+ + ++ +G D ++
Sbjct: 61 LNLLSKMEETHI-------KAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVIT 113
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I CR G + + +LL M+ R PDV + LI+ +++ K A E ML
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDML 173
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T T++S++ ++ +++ R+ M ++ ++ + I D
Sbjct: 174 RRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVD 233
Query: 245 KAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
EI ++++G V ++ C+ G L A+ LL + + + +++
Sbjct: 234 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQ 327
LC + +AF + +L + H
Sbjct: 294 ASLCSKKELRKAFAILEDLQKSEGHH 319
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 158/358 (44%), Gaps = 19/358 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SP++ TF+ LI G +++AL+ ++ M+ +T +I+ + +++A
Sbjct: 369 GPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEA 428
Query: 66 EKLFDELFEK---EIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QD 121
KLFDE FE + +C I +LC+ GKT +A +L ++ RG +
Sbjct: 429 LKLFDESFETGLANVFVC-----------NTILSWLCKQGKTDEATELLSKMESRGIGPN 477
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+SY V++GHCR+ + + +L + P+ Y LIDG + A+E +
Sbjct: 478 VVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVN 537
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKS-IELLFGH 240
M S+ + +I+ L + G ++ + M++ +S S I+ F
Sbjct: 538 HMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKE 597
Query: 241 GHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
G D A E + G + ++ LCK ++ +A ++ +DI
Sbjct: 598 GEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAY 657
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
A+I G C+ + + A L EL+E+GL+ N L++ G + A + K++
Sbjct: 658 GALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM 715
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 8/219 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SP+ T+ +L++ C +D+AL++ + MKN V D +Y LI C+R + + A
Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESA 673
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
LF EL E+ + SQP+ S F+ L G A + ++++K G + D +
Sbjct: 674 SALFSELLEEGL----NPSQPIYNSLISGFRNL---GNMVAALDLYKKMLKDGLRCDLGT 726
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G ++G EL M +PD IY +++G +K + + ++ E+M
Sbjct: 727 YTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMK 786
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI 223
K++ P +++++A +G E+ R+ MLD+ I
Sbjct: 787 KNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 153/373 (41%), Gaps = 47/373 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ ++N ++ HC N+D A VF N+ + ++ +YSILI + D A
Sbjct: 473 GIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNA 532
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM--KRGTQDPL 123
++ + + I + Y+ I LC+ G+T KA +L ++ KR +
Sbjct: 533 LEVVNHMTSSNIEVN-------GVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCM 585
Query: 124 SYMTVIMGHCREG-------AYE----NGY------------------------ELLIWM 148
SY ++I G +EG AYE NG E+ M
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 149 LRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFP 208
+ D+ Y LIDGF ++ A ++L+ P ++S+++ G
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 209 HESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFC---VKIEEV 265
+ + ML +R ++ T I+ L G+ A E+ + G + +
Sbjct: 706 VAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVI 765
Query: 266 VQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGL 325
V L K+G+ + K+ KN+ ++ + NAVI G + EAF L E+++KG+
Sbjct: 766 VNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Query: 326 HQELTCLNDLVTA 338
+ + LV+
Sbjct: 826 LPDGATFDILVSG 838
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 8/172 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P +N+LI + GN+ AL +++ M + D +Y+ LI L + G+ A
Sbjct: 684 GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILA 743
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+L+ E+ G P Y I L + G+ K ++ ++ K T + L
Sbjct: 744 SELYTEM-------QAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLI 796
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLA 176
Y VI GH REG + + L ML + LPD +D L+ G + +P+ A
Sbjct: 797 YNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRA 848
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 150/380 (39%), Gaps = 46/380 (12%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P T+ ++I + GN+D+A+++ + M + ++ + + + LI C+ D A L
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMT 127
FD++ EKE G P + ++ + ++ ++G+ KA +++ G T T
Sbjct: 362 FDKM-EKE------GPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHT 414
Query: 128 VIMGH----------------------------------CREGAYENGYELLIWMLRRDF 153
+I G C++G + ELL M R
Sbjct: 415 IIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGI 474
Query: 154 LPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESAR 213
P+V Y+ ++ G ++ LA +L+ P T+ ++ +
Sbjct: 475 GPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALE 534
Query: 214 VTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIV-ELLYKKGFCV---KIEEVVQFL 269
V M NI N + I L G KA E++ ++ +K CV ++
Sbjct: 535 VVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGF 594
Query: 270 CKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQEL 329
K G++ A N + ++ +++ GLC+ NR+ +A + E+ KG+ ++
Sbjct: 595 FKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDI 654
Query: 330 TCLNDLVTALEARGKVEEAA 349
L+ R +E A+
Sbjct: 655 PAYGALIDGFCKRSNMESAS 674
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/410 (20%), Positives = 160/410 (39%), Gaps = 58/410 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D T L+ + EAL+V DS YS+ ++ C+ D A
Sbjct: 228 GVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMA 287
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
L E+ EK++ + P +Y + + G A R+ +++ G + + ++
Sbjct: 288 NSLLREMKEKKLCV------PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVA 341
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
++I GHC+ + L M + P+ + LI+ F + + A+E +KM
Sbjct: 342 ATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKME 401
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQ---NINLSTKSIELLFGHG 241
P H+I+ L KG HE A + + D + N+ + + L G
Sbjct: 402 VLGLTPSVFHVHTIIQGWL-KGQKHEEA---LKLFDESFETGLANVFVCNTILSWLCKQG 457
Query: 242 HRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFS------------- 285
D+A E++ + +G V V+ C++ + AR ++FS
Sbjct: 458 KTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLAR--IVFSNILEKGLKPNNYT 515
Query: 286 --------LKNH--------------HNVDID--LCNAVILGLCEINRVLEAFGLCYELV 321
+NH N++++ + +I GLC++ + +A L ++
Sbjct: 516 YSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI 575
Query: 322 -EKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYSS 370
EK L N ++ G+++ A + + G + +V++Y+S
Sbjct: 576 EEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCG-NGISPNVITYTS 624
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 168/388 (43%), Gaps = 46/388 (11%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD CT+N LI+ C+AG++ E L++ + MK+ ++ D +Y+ LI + G +A KL
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 367
Query: 69 FDELFEKEIV-------------LCK-----------------FGSQPLAASYKPIFQYL 98
+++ E + V LCK G P +Y + +
Sbjct: 368 MEQM-ENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAY 426
Query: 99 CEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDV 157
+ G A ++R++ ++G + + ++ T++ C+E + + LL +R F+ D
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDE 486
Query: 158 EIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVM 217
Y LI GF +++K A+E ++M K P ST++S++ G H M
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIG-----GLCHHGKTELAM 541
Query: 218 MLDRNIRQNINLSTKSI--ELLFGH---GHRDKAFEIVELLYKKGF---CVKIEEVVQFL 269
+ ++ L S ++ G+ G +KAFE K F ++ L
Sbjct: 542 EKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601
Query: 270 CKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQEL 329
CK G +A +L VD N +I C+ ++ EA+ L E+ EKGL +
Sbjct: 602 CKEGMTEKALNFF-NTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDR 660
Query: 330 TCLNDLVTALEARGKVEEAAFISKRIPG 357
N ++ L GK+ E + K+ G
Sbjct: 661 FTYNSFISLLMEDGKLSETDELLKKFSG 688
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 164/359 (45%), Gaps = 33/359 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENM-KNFQVTADSASYSILIRNLCQRGDY-D 63
G S + TFN L++ +C G L++AL + E M F+V D+ +Y+ +++ + ++G D
Sbjct: 199 GVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSD 258
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP- 122
E L D + K G P +Y + C+ G ++A +++ ++MK+ P
Sbjct: 259 LKELLLD--------MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV-ELMKQTNVLPD 309
Query: 123 -LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+Y +I G C G+ G EL+ M PDV Y+ LIDG + L A + +E
Sbjct: 310 LCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLME 369
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH- 240
+M ++ + H+I + L K E R V R +++ +++ S +++ H
Sbjct: 370 QM-ENDGVKANQVTHNISLKWLCK----EEKREAVT---RKVKELVDMHGFSPDIVTYHT 421
Query: 241 --------GHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNH 289
G A E++ + +KG + + ++ LCK KL EA LL + K
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481
Query: 290 HNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
VD +I+G +V +A + E+ + + ++ N L+ L GK E A
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELA 540
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 8/166 (4%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G G +T T NT++ + C LDEA + + D +Y LI +
Sbjct: 443 GQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKV 502
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQD 121
+KA +++DE+ + +I P +++ + LC HGKT A ++ + G D
Sbjct: 503 EKALEMWDEMKKVKIT-------PTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPD 555
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGF 167
++ ++I+G+C+EG E +E ++ F PD + L++G
Sbjct: 556 DSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 28/195 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF D T+ TLI +++AL++++ MK ++T ++++ LI LC G + A
Sbjct: 481 GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELA 540
Query: 66 EKLFDELFE----------KEIVL--CK---------FGSQPLAASYKP-------IFQY 97
+ FDEL E I+L CK F ++ + S+KP +
Sbjct: 541 MEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNG 600
Query: 98 LCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDV 157
LC+ G T KA +++ D ++Y T+I C++ + Y+LL M + PD
Sbjct: 601 LCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDR 660
Query: 158 EIYDCLIDGFLQKDK 172
Y+ I ++ K
Sbjct: 661 FTYNSFISLLMEDGK 675
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
+ G PD TFN++I +C G +++A + + D+ + +IL+ LC+ G
Sbjct: 548 AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMT 607
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-D 121
+KA F+ L E+ V +Y + C+ K ++A +L ++ ++G + D
Sbjct: 608 EKALNFFNTLIEEREV--------DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659
Query: 122 PLSYMTVIMGHCREGAYENGYELL 145
+Y + I +G ELL
Sbjct: 660 RFTYNSFISLLMEDGKLSETDELL 683
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 107/227 (47%), Gaps = 16/227 (7%)
Query: 155 PDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLE--KGFPHESA 212
P ++D + +L + KP +A++ +KM++ P T +++L L+ F SA
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 213 RVTVMMLDRNIRQNINLSTKSIELLFG----HGHRDKAFEIVELLYKKGFCVKIEEV--- 265
R + D ++ ++L+ ++ +L G + A ++E + + F V + V
Sbjct: 189 R---EVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSE-FKVNPDNVTYN 244
Query: 266 --VQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEK 323
++ + K+G+L + ++LLL KN + N ++ G C++ + EAF + + +
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 324 GLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYSS 370
+ +L N L+ L G + E + + L+ L V++Y++
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLK-LQPDVVTYNT 350
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 144/340 (42%), Gaps = 40/340 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT TF TLIH EA+ + + M D +Y ++ LC+RGD D A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 66 EKLFDEL----FEKEIV--------LCKF----------------GSQPLAASYKPIFQY 97
L +++ E +V LCK+ G +P +Y +
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 98 LCEHGKTRKAERVLRQIMKRGTQDPL-SYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
LC +G+ A R+L +++R L ++ +I ++G +L M++R P+
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
+ Y LI+GF D+ A + LE M++ LP T+++++ + + +
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE-------VVQFL 269
M R + N T I F D A ++++K+ V + ++ L
Sbjct: 418 EMSQRGLVGNTVTYTTLIHGFFQARDCDNA----QMVFKQMVSVGVHPNILTYNILLDGL 473
Query: 270 CKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINR 309
CK GKL +A + + ++ DI N +I G+C+ +
Sbjct: 474 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 135/344 (39%), Gaps = 40/344 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G S + T+N LI+ C L AL + M D + + L+ C A
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L D++ E G +P ++ + L H K +A ++ ++++RG Q D ++
Sbjct: 168 VALVDQMVE-------MGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVT 220
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y V+ G C+ G + LL M +V IY +ID + A+ +M
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 280
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
P T+ S+++ L G +++R+ M++R I N+
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL----------------- 323
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
V ++ K+GKL +A KL +K + +I +++I G
Sbjct: 324 ---------------VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
C ++R+ EA + ++ K + N L+ +V++
Sbjct: 369 CMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKG 412
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/326 (19%), Positives = 138/326 (42%), Gaps = 11/326 (3%)
Query: 27 LDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQP 86
LD+A+ +F M + +S L+ + + +D L EK +L G
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFD----LVISFGEKMEIL---GISH 111
Query: 87 LAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELL 145
+Y + C + A +L ++MK G + D ++ +++ G C + L+
Sbjct: 112 NLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALV 171
Query: 146 IWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEK 205
M+ + PD + LI G +K A+ +++M++ P T+ +++ L ++
Sbjct: 172 DQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKR 231
Query: 206 GFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKI 262
G + + M I N+ + + I+ L + H D A + + KG +
Sbjct: 232 GDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 291
Query: 263 EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVE 322
++ LC G+ +A +LL ++ N ++ +A+I + ++++A L E+++
Sbjct: 292 SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK 351
Query: 323 KGLHQELTCLNDLVTALEARGKVEEA 348
+ + + + L+ ++ EA
Sbjct: 352 RSIDPNIFTYSSLINGFCMLDRLGEA 377
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 148/348 (42%), Gaps = 12/348 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT TF TL+H EA+ + E M D +Y +I LC+RG+ D A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L +++ + +I + Y I LC++ A + ++ +G + D +
Sbjct: 235 LNLLNKMEKGKI-------EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I C G + + LL ML ++ PD+ ++ LID F+++ K + A + ++M+
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 185 KSSY-LPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
KS + P +++++ + E V M R + N T I F
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 244 DKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
D A + + + G I ++ LC G + A + + K +DI +
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
I LC+ +V + + L L KG+ + +++ +G EEA
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 515
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 121/284 (42%), Gaps = 12/284 (4%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G D +NT+I C ++D+A +F M+ + D +Y+ LI LC G +
Sbjct: 244 GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSD 303
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT--QDP 122
A +L ++ EK I P + + + GK +AE++ +++K D
Sbjct: 304 ASRLLSDMLEKNI-------NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
++Y T+I G C+ E G E+ M +R + + Y LI GF Q A ++
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 416
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M+ P T++ +L L G + V M R+++ +I T IE L G
Sbjct: 417 MVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGK 476
Query: 243 RDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLL 283
+ +++ L KG V ++ C++G EA L +
Sbjct: 477 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFV 520
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 8/207 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD +NTLI C ++E ++VF M + ++ +Y+ LI Q D D A+ +
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
F ++ G P +Y + LC +G A V + KR + D ++Y T
Sbjct: 414 FKQMVSD-------GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I C+ G E+G++L + + P+V Y ++ GF +K A +M +
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Query: 188 YLPKTSTWHSILARLLEKGFPHESARV 214
LP + T+++++ L G SA +
Sbjct: 527 PLPNSGTYNTLIRARLRDGDEAASAEL 553
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 145/352 (41%), Gaps = 12/352 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P F+ L+ + D + + E M+N ++ + +YSI I C+R A +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
++ K G P + + C + +A ++ Q+++ G Q D +++ T
Sbjct: 133 LGKMM-------KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTT 185
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G + L+ M+ + PD+ Y +I+G ++ +P LA+ L KM K
Sbjct: 186 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 245
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
+++I+ L + ++ + M + I+ ++ I L +G A
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305
Query: 248 EIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNV-DIDLCNAVILG 303
++ + +K V ++ K GKL EA KL +K+ H D+ N +I G
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
C+ RV E + E+ ++GL L+ + A + K++
Sbjct: 366 FCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 417
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 9/202 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +T T+ TLIH A + D A VF+ M + V D +Y+IL+ LC G+ + A
Sbjct: 386 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETA 445
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+F+ + ++++ L +Y + + LC+ GK + + +G + + ++
Sbjct: 446 LVVFEYMQKRDMKLD-------IVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVT 498
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T++ G CR+G E L + M LP+ Y+ LI L+ + E +++M
Sbjct: 499 YTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMR 558
Query: 185 KSSYLPKTSTWHSILARLLEKG 206
+ ST+ ++ +L G
Sbjct: 559 SCGFAGDASTF-GLVTNMLHDG 579
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 123/323 (38%), Gaps = 40/323 (12%)
Query: 27 LDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQP 86
LD+A+ +F +M + +S L+ + + +D L +++ G
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM-------QNLGISH 108
Query: 87 LAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIM-GHCREGAYENGYELL 145
+Y Y C + A +L ++MK G + + ++ G C L+
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 146 IWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEK 205
M+ + PD + L+ G Q +K A+ +E+M+ P T+ +++ L ++
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228
Query: 206 GFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEV 265
G P + + M I ++ + I+ L + H D AF++ + KG
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI------- 281
Query: 266 VQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGL 325
D+ N +I LC R +A L +++EK +
Sbjct: 282 -------------------------KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316
Query: 326 HQELTCLNDLVTALEARGKVEEA 348
+ +L N L+ A GK+ EA
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEA 339
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 14/177 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+N L+ C+ GN++ AL VFE M+ + D +Y+ +I LC+ G +
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
LF L K G +P +Y + C G +A+ + ++ + G + +
Sbjct: 481 WDLFCSLSLK-------GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIY----DCLIDGFLQKDKPLLAM 177
Y T+I R+G EL+ M F D + + L DG L DK L M
Sbjct: 534 YNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRL--DKSFLDM 588
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 149/355 (41%), Gaps = 11/355 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G S D +F LIH C L AL V M ++ L+ C A
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
F I++ K G +P Y + LC++G+ A +L ++ K+G D ++
Sbjct: 161 -------FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVT 213
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T++ G C G + + +L M++R PDV + LID F+++ A E ++M+
Sbjct: 214 YNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI 273
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+SS P T++SI+ L G +++ + +M + N+ I D
Sbjct: 274 QSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVD 333
Query: 245 KAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+ ++ + + +GF I ++ C+ GKL A + + + DI ++
Sbjct: 334 EGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILL 393
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIP 356
GLC + A ++ E + + N ++ L KVE+A + R+P
Sbjct: 394 HGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLP 448
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 8/141 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF+ D T+NTLIH +C G L AL +F M + +VT D ++ IL+ LC G+ + A
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
FD++ E E + +Y + LC+ K KA + ++ G + D +
Sbjct: 406 LVKFDDMRESEKYIG-------IVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDART 458
Query: 125 YMTVIMGHCREGAYENGYELL 145
Y +I+G C+ G EL+
Sbjct: 459 YTIMILGLCKNGPRREADELI 479
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 150/347 (43%), Gaps = 49/347 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G S D+ + +++I C G +EA+K+ + +F++ + YS + N+C GD +A
Sbjct: 336 GISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVYSSFLSNICSTGDMLRA 392
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
+F E+FE G P Y + C G+T KA + ++K G L+
Sbjct: 393 STIFQEIFE-------LGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTT 445
Query: 126 MTVIMGHC-REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
T+++G C R G+ + + M DV Y+ L+ G+ + + E +++M
Sbjct: 446 STILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMR 505
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P +T++ ++ ++ +G+ D
Sbjct: 506 SAGISPDVATYNILIHSMVVRGYI-----------------------------------D 530
Query: 245 KAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A EI+ L ++GF + +V+ KRG EA L + D+ C+A++
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
G C+ R+ +A L +L++ GL ++ N L+ + G +E+A
Sbjct: 591 HGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKA 637
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 10/215 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D T+N L+H + L++ ++ + M++ ++ D A+Y+ILI ++ RG D+A
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEA 532
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK--RGTQDPL 123
++ EL + V P ++ + + G ++A +L M R D +
Sbjct: 533 NEIISELIRRGFV-------PSTLAFTDVIGGFSKRGDFQEA-FILWFYMADLRMKPDVV 584
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+ ++ G+C+ E L +L PDV +Y+ LI G+ A E + M
Sbjct: 585 TCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLM 644
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMM 218
++ LP ST H+++ L K F + ++++
Sbjct: 645 VQRGMLPNESTHHALVLGLEGKRFVNSETHASMLL 679
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 98/221 (44%), Gaps = 9/221 (4%)
Query: 8 SPDTCTFNTLIHSHCSA-GNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
+P + T +T++ CS G++ +A VF NMK + D +Y+ L+ + +K
Sbjct: 439 NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVF 498
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSY 125
+L DE+ G P A+Y + + G +A ++ ++++RG L++
Sbjct: 499 ELIDEMRSA-------GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAF 551
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
VI G + G ++ + L +M PDV L+ G+ + + A+ K+L
Sbjct: 552 TDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLD 611
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN 226
+ P +++++ G ++ + +M+ R + N
Sbjct: 612 AGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPN 652
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 150/347 (43%), Gaps = 49/347 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G S D+ + +++I C G +EA+K+ + +F++ + YS + N+C GD +A
Sbjct: 336 GISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVYSSFLSNICSTGDMLRA 392
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
+F E+FE G P Y + C G+T KA + ++K G L+
Sbjct: 393 STIFQEIFE-------LGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTT 445
Query: 126 MTVIMGHC-REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
T+++G C R G+ + + M DV Y+ L+ G+ + + E +++M
Sbjct: 446 STILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMR 505
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P +T++ ++ ++ +G+ D
Sbjct: 506 SAGISPDVATYNILIHSMVVRGYI-----------------------------------D 530
Query: 245 KAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A EI+ L ++GF + +V+ KRG EA L + D+ C+A++
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
G C+ R+ +A L +L++ GL ++ N L+ + G +E+A
Sbjct: 591 HGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKA 637
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 10/215 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D T+N L+H + L++ ++ + M++ ++ D A+Y+ILI ++ RG D+A
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEA 532
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK--RGTQDPL 123
++ EL + V P ++ + + G ++A +L M R D +
Sbjct: 533 NEIISELIRRGFV-------PSTLAFTDVIGGFSKRGDFQEA-FILWFYMADLRMKPDVV 584
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+ ++ G+C+ E L +L PDV +Y+ LI G+ A E + M
Sbjct: 585 TCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLM 644
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMM 218
++ LP ST H+++ L K F + ++++
Sbjct: 645 VQRGMLPNESTHHALVLGLEGKRFVNSETHASMLL 679
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 98/221 (44%), Gaps = 9/221 (4%)
Query: 8 SPDTCTFNTLIHSHCSA-GNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
+P + T +T++ CS G++ +A VF NMK + D +Y+ L+ + +K
Sbjct: 439 NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVF 498
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSY 125
+L DE+ G P A+Y + + G +A ++ ++++RG L++
Sbjct: 499 ELIDEMRSA-------GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAF 551
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
VI G + G ++ + L +M PDV L+ G+ + + A+ K+L
Sbjct: 552 TDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLD 611
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN 226
+ P +++++ G ++ + +M+ R + N
Sbjct: 612 AGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPN 652
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 125/278 (44%), Gaps = 11/278 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P +FNTLI+ +C GNLDE ++ M+ + D +YS LI LC+ D A L
Sbjct: 273 PTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGL 332
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
FDE +CK G P + + +G+ + ++++ +G Q D + Y T
Sbjct: 333 FDE-------MCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNT 385
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G C+ G ++ M+RR PD Y LIDGF + A+E ++M ++
Sbjct: 386 LVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNG 445
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
+ +++ + ++G ++ R ML I+ + T ++ G F
Sbjct: 446 IELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGF 505
Query: 248 EIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLL 282
++++ + G V ++ LCK G++ A LL
Sbjct: 506 KLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLL 543
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 8/195 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD +NTL++ C G+L A + + M + D +Y+ LI C+ GD + A
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
++ E+ + I L + G L +C+ G+ AER LR++++ G + D ++
Sbjct: 435 LEIRKEMDQNGIELDRVGFSALVCG-------MCKEGRVIDAERALREMLRAGIKPDDVT 487
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ C++G + G++LL M +P V Y+ L++G + + A L+ ML
Sbjct: 488 YTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAML 547
Query: 185 KSSYLPKTSTWHSIL 199
+P T++++L
Sbjct: 548 NIGVVPDDITYNTLL 562
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 148/344 (43%), Gaps = 25/344 (7%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D GF + FN L++ C GN+ +A KVF+ + + S++ LI C+ G+ D
Sbjct: 233 DAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLD 292
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
+ +L ++ + ++P +Y + LC+ K A + ++ KRG +
Sbjct: 293 EGFRLKHQMEKSR-------TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND 345
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+ + T+I GH R G + E ML + PD+ +Y+ L++GF + + A ++
Sbjct: 346 VIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDG 405
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN-INLSTKSIELLF--- 238
M++ P T+ +++ GF T + + + + QN I L L
Sbjct: 406 MIRRGLRPDKITYTTLI-----DGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGM 460
Query: 239 -GHGHRDKAFEIVELLYKKGFCVKIEEV-----VQFLCKRGKLPEARKLLLFSLKNHHNV 292
G A + + + G +K ++V + CK+G KLL + H
Sbjct: 461 CKEGRVIDAERALREMLRAG--IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 518
Query: 293 DIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLV 336
+ N ++ GLC++ ++ A L ++ G+ + N L+
Sbjct: 519 SVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 8/162 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+ TLI C G+++ AL++ + M + D +S L+ +C+ G A
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
E+ E+ + G +P +Y + C+ G + ++L+++ G ++
Sbjct: 470 ERALREML-------RAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVT 522
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDG 166
Y ++ G C+ G +N LL ML +PD Y+ L++G
Sbjct: 523 YNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 126/301 (41%), Gaps = 40/301 (13%)
Query: 49 YSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAE 108
++IL+ C+ G+ A+K+FDE+ ++ + QP S+ + C+ G +
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSL-------QPTVVSFNTLINGYCKVGNLDEGF 295
Query: 109 RVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGF 167
R+ Q+ K T+ D +Y +I C+E + + L M +R +P+ I+ LI G
Sbjct: 296 RLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGH 355
Query: 168 LQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNI 227
+ + L E+ +KML P +++++ + G + + M+ R +R +
Sbjct: 356 SRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDK 415
Query: 228 NLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLK 287
T I+ G + A EI + + + G ++++ V FS
Sbjct: 416 ITYTTLIDGFCRGGDVETALEIRKEMDQNG--IELDRVG-----------------FS-- 454
Query: 288 NHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEE 347
A++ G+C+ RV++A E++ G+ + ++ A +G +
Sbjct: 455 -----------ALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQT 503
Query: 348 A 348
Sbjct: 504 G 504
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 146/309 (47%), Gaps = 15/309 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G+ +T T+N L+ C G+L+++L+ E + + ++ +YS L+ + D
Sbjct: 169 DHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTD 228
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
+A KL DE+ K G +P SY + C+ G+T A + R++ +G + +
Sbjct: 229 EAVKLLDEIIVK-------GGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANV 281
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+SY ++ C +G +E LL M D P V Y+ LI+ + A++ L++
Sbjct: 282 VSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKE 341
Query: 183 MLKSS--YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
M K + + ++++ ++ARL ++G + M+ R + N + +I L H
Sbjct: 342 MSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEG-TYNAIGSLCEH 400
Query: 241 GHR-DKAFEIVELLYKKGFCVK---IEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL 296
+ +AF I++ L K C + V+ LC++G A +LL + + D
Sbjct: 401 NSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHT 460
Query: 297 CNAVILGLC 305
+A+I GLC
Sbjct: 461 YSALIRGLC 469
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 117/250 (46%), Gaps = 21/250 (8%)
Query: 4 DGG-FSPDTCTFNTLIHSHCSAGNLDEALKVFENMK--NFQVTADSASYSILIRNLCQRG 60
DGG +P T+N LI+S G ++AL+V + M N Q + SY+ +I LC+ G
Sbjct: 308 DGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEG 367
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEH-GKTRKAERVLRQIMKRG- 118
D K DE+ + CK P +Y I LCEH K ++A +++ + +
Sbjct: 368 KVDLVVKCLDEMIYRR---CK----PNEGTYNAIGS-LCEHNSKVQEAFYIIQSLSNKQK 419
Query: 119 --TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLA 176
T D Y +VI CR+G ++LL M R F PD Y LI G + A
Sbjct: 420 CCTHD--FYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGA 477
Query: 177 METLEKMLKSSYL-PKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIE 235
ME L M +S P +++++ L + + V MM+++ ++ N +T +I
Sbjct: 478 MEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEK--KRMPNETTYAI- 534
Query: 236 LLFGHGHRDK 245
L+ G H D+
Sbjct: 535 LVEGIAHEDE 544
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 11/178 (6%)
Query: 9 PDTCTFNTLIHSHCSAGN-LDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
P+ T+N I S C + + EA + +++ N Q Y +I +LC++G+ A
Sbjct: 386 PNEGTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAA-- 442
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL--SY 125
F L+E + + G P A +Y + + LC G A VL + + P ++
Sbjct: 443 -FQLLYE----MTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNF 497
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+I+G C+ + E+ M+ + +P+ Y L++G +D+ LA E L+++
Sbjct: 498 NAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDEL 555
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 136/295 (46%), Gaps = 33/295 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + +T T+N+LI+ C G L EAL++F++++N + +Y ILI NLC+ G + A
Sbjct: 685 GVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDA 744
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVL-RQIMKRGTQDPLS 124
EKL D + K +V P Y I C+ G+T A RV+ R++M R T D +
Sbjct: 745 EKLLDSMVSKGLV-------PNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFT 797
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
++I G+C++G E + ++ D + LI GF K + A L +ML
Sbjct: 798 VSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Query: 185 KS-----------SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKS 233
S + L ++ + L L E+G ++ ++ LD I I S K+
Sbjct: 858 VSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAIKI----LDE-ISSTIYPSGKN 912
Query: 234 IELLFGHGHRDKAFEIV--ELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLL 283
+ G R + V E + KK + + V LC GKL +A + ++
Sbjct: 913 L----GSYQRLQFLNDVNEEEIKKKDYVHDFHSLHSTVSSLCTSGKLEQANEFVM 963
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 161/367 (43%), Gaps = 22/367 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D GF D ++ IH + G L +AL M + D SYSILI L + G+ +
Sbjct: 235 DEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVE 294
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
+A L ++ ++ G +P +Y I + LC+ GK +A + +I+ G + D
Sbjct: 295 EALGLLGKMIKE-------GVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDE 347
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
Y+T+I G CR+G + +L M +R P + Y+ +I+G + A E
Sbjct: 348 FLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADE---- 403
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNI---NLSTKSIELLFG 239
+ + T+ ++L ++ + L+ I ++ N+ K+ L+
Sbjct: 404 -VSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGA 462
Query: 240 HGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC-N 298
+G D + + + +++ CK G++ EA L +F+ +V +C N
Sbjct: 463 YGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEA--LEMFNELRKSSVSAAVCYN 520
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGL 358
+I LC+ + A + EL EKGL+ ++ L+ ++ A G + I + GL
Sbjct: 521 RIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKG---ILGLVYGL 577
Query: 359 ENLDRSV 365
E L+ V
Sbjct: 578 EQLNSDV 584
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 150/349 (42%), Gaps = 19/349 (5%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
+PDT T+ T+I +C G ++EAL++F ++ V+A + Y+ +I LC++G D A
Sbjct: 478 LTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTAT 536
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYM 126
++ EL+EK + L S+ L S +G + ++ + + + L +
Sbjct: 537 EVLIELWEKGLYLDIHTSRTLLHSIHA-------NGGDKGILGLVYGLEQLNSDVCLGML 589
Query: 127 T-VIMGHCREGAYENGYELLIWMLRRDF---LPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
I+ C+ G++E E+ + M R+ P I L+D D LL + E
Sbjct: 590 NDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPST-ILKTLVDNLRSLDAYLLVVNAGET 648
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
L S + I+ L ++GF ++ + R + N I L G
Sbjct: 649 TLSSM---DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGC 705
Query: 243 RDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNA 299
+A + + L G V ++ LCK G +A KLL + +I + N+
Sbjct: 706 LVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNS 765
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
++ G C++ + +A + + + + ++ ++ +G +EEA
Sbjct: 766 IVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEA 814
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
S D + +I+ C G L +AL + K+ VT ++ +Y+ LI LCQ+G +A +
Sbjct: 652 SMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALR 711
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYM 126
LFD L G P +Y + LC+ G AE++L ++ +G + + Y
Sbjct: 712 LFDSLE-------NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYN 764
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+++ G+C+ G E+ ++ + PD +I G+ +K A+ +
Sbjct: 765 SIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDK 824
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
+ + ++ KG E+ R + + + +S ++L+ +R A
Sbjct: 825 NISADFFGFLFLIKGFCTKGRMEEA---------RGLLREMLVSESVVKLI----NRVDA 871
Query: 247 FEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLL 282
E+ E +GF V+ LC++G++P+A K+L
Sbjct: 872 -ELAESESIRGFLVE-------LCEQGRVPQAIKIL 899
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 164/408 (40%), Gaps = 54/408 (13%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GFSP + + + + L+ + + + Q+ + YSI+ Y+ A
Sbjct: 21 GFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLNLNRYEDA 80
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--L 123
EK + K + F + S I + K +LR ++ P L
Sbjct: 81 EKFINIHISKASI---FPRTHMLDSL--IHGFSITRDDPSKGLLILRDCLRNHGAFPSSL 135
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDC--LIDGFLQKDKPLLAMETLE 181
++ ++I +G +N E+L M ++ + + C +I GF + KP LA+ E
Sbjct: 136 TFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFE 195
Query: 182 KMLKSSYL-PKTSTWHSILA----------------RLLEKGFPHE-------------- 210
+ S L P T+ ++++ RL ++GF +
Sbjct: 196 SAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKG 255
Query: 211 SARVTVMMLDRN-IRQNINLSTKSIELLFG----HGHRDKAFEIVELLYKKGF---CVKI 262
A V +M DR + + +N S +L G+ ++A ++ + K+G +
Sbjct: 256 GALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITY 315
Query: 263 EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVE 322
+++ LCK GKL EA L L VD L +I G+C + AF + ++ +
Sbjct: 316 TAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQ 375
Query: 323 KGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYSS 370
+G+ + N ++ L G+V EA +SK + G V++YS+
Sbjct: 376 RGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVG------DVITYST 417
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G +PD T +++I +C G+++EAL VF K+ ++AD + LI+ C +G ++
Sbjct: 789 GRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEE 848
Query: 65 AEKLFDELFEKEIV--LCKFGSQPLA--ASYKPIFQYLCEHGKTRKAERVLRQI 114
A L E+ E V L LA S + LCE G+ +A ++L +I
Sbjct: 849 ARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAIKILDEI 902
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 146/338 (43%), Gaps = 31/338 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PDT T++ +++ C+A ++ A +FE MK + AD +Y+I++ + C+ G ++A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
K F+E+ E G P +Y + + K A + ++ G + ++
Sbjct: 538 RKWFNEMRE-------VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVT 590
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEI----------------YDCLIDGFL 168
Y +I GHC+ G E ++ M +PDV++ Y L+DGF
Sbjct: 591 YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 650
Query: 169 QKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNIN 228
+ + A + L+ M P + +++ L + G E+ V M + +
Sbjct: 651 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 710
Query: 229 LSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFS 285
+ I+ F +D A +++ + + + E++ LCK GK EA KL+
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 286 LKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEK 323
+ ++ A+I G I ++ C EL+E+
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKI----ETCLELLER 804
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 131/290 (45%), Gaps = 13/290 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P+ T+ LIH++ A + A ++FE M + + +YS LI C+ G +KA
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 607
Query: 66 EKLFD------ELFEKEIVLCKF---GSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK 116
++F+ ++ + ++ ++ +P +Y + C+ + +A ++L +
Sbjct: 608 CQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSM 667
Query: 117 RGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLL 175
G + + + Y +I G C+ G + E+ M F + Y LID + + + L
Sbjct: 668 EGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL 727
Query: 176 AMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIE 235
A + L KML++S P + ++ L + G E+ ++ MM ++ + N+ T I+
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 236 LLFGHGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLL 282
G + E++E + KG V ++ CK G L A LL
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLL 837
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 120/272 (44%), Gaps = 28/272 (10%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
GG D T+ ++ S C AG +++A K F M+ T + +Y+ LI +
Sbjct: 512 GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSY 571
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQD--- 121
A +LF+ + + G P +Y + C+ G+ KA ++ ++ G++D
Sbjct: 572 ANELFETMLSE-------GCLPNIVTYSALIDGHCKAGQVEKACQIFERMC--GSKDVPD 622
Query: 122 ----------------PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLID 165
++Y ++ G C+ E +LL M P+ +YD LID
Sbjct: 623 VDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALID 682
Query: 166 GFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQ 225
G + K A E +M + + T+ S++ R + +++V ML+ +
Sbjct: 683 GLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAP 742
Query: 226 NINLSTKSIELLFGHGHRDKAFEIVELLYKKG 257
N+ + T+ I+ L G D+A+++++++ +KG
Sbjct: 743 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 150/377 (39%), Gaps = 45/377 (11%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D P+ T+ L+ C + ++EA K+ + M + Y LI LC+ G D
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 691
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
+A+++ E+ E G +Y + + + A +VL ++++ +
Sbjct: 692 EAQEVKTEMSEH-------GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNV 744
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+ Y +I G C+ G + Y+L+ M + P+V Y +IDGF K +E LE+
Sbjct: 745 VIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 804
Query: 183 MLKSSYLPKTSTW----------------HSILARLLEKGFPHESARVTVMMLDRNIRQN 226
M P T+ H++L + + +P +A R + +
Sbjct: 805 MGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGY------RKVIEG 858
Query: 227 INLS-TKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFS 285
N +S+ LL G D A F ++ L K +L A +LL
Sbjct: 859 FNKEFIESLGLLDEIGQDDTA----------PFLSVYRLLIDNLIKAQRLEMALRLLE-E 907
Query: 286 LKNHHNVDIDLC---NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEAR 342
+ +D N++I LC N+V AF L E+ +KG+ E+ L+ L
Sbjct: 908 VATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRN 967
Query: 343 GKVEEAAFISKRIPGLE 359
K+ EA + I +E
Sbjct: 968 SKISEALLLLDFISHME 984
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/368 (19%), Positives = 132/368 (35%), Gaps = 66/368 (17%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGD---- 61
G P FN+L+H++C++G+ A K+ + M Y+ILI ++C D
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 62 --YDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT 119
D AEK + E+ +VL K R L
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFT--------------------RCL-------- 458
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
C G YE + ++ M+ + F+PD Y +++ K LA
Sbjct: 459 -------------CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLL 505
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
E+M + + T+ ++ + G ++ + M + N+ T I
Sbjct: 506 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565
Query: 240 HGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL 296
A E+ E + +G V ++ CK G++ +A ++ + D+D+
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 625
Query: 297 ----------------CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALE 340
A++ G C+ +RV EA L + +G + L+ L
Sbjct: 626 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685
Query: 341 ARGKVEEA 348
GK++EA
Sbjct: 686 KVGKLDEA 693
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/411 (19%), Positives = 153/411 (37%), Gaps = 38/411 (9%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D F P T+N LI + A LD A + M + D + +LC+ G +
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWR 287
Query: 64 KAEKLF-------DELFEKEIV--LCK----------------FGSQPLAASYKPIFQYL 98
+A L D +F +++ LC+ P +Y +
Sbjct: 288 EALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC 347
Query: 99 CEHGKTRKAERVLRQIMKRGT-QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDV 157
+ + +RVL +M G P + +++ +C G + Y+LL M++ +P
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY 407
Query: 158 EIYDCLIDGFLQKDKPL------LAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHES 211
+Y+ LI L LA + +ML + + S L G ++
Sbjct: 408 VVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 467
Query: 212 ARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQF 268
V M+ + + + +K + L + AF + E + + G + +V
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527
Query: 269 LCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQE 328
CK G + +ARK + ++ A+I + +V A L ++ +G
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587
Query: 329 LTCLNDLVTALEARGKVEEAAFISKRIPG---LENLDRSVLSYSSKKSRPN 376
+ + L+ G+VE+A I +R+ G + ++D Y RPN
Sbjct: 588 IVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 638
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 134/348 (38%), Gaps = 26/348 (7%)
Query: 14 FNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELF 73
N L+ HC G+ AL+ +K+F+ ++Y+ LI+ + D A + E+
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 74 EKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGHC 133
+ + F + A S LC+ GK R+A ++ + D + Y +I G C
Sbjct: 263 LANLRMDGFTLRCFAYS-------LCKVGKWREALTLVET--ENFVPDTVFYTKLISGLC 313
Query: 134 REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTS 193
+E + L M LP+V Y L+ G L K + L M+ P
Sbjct: 314 EASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPK 373
Query: 194 TWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH--GHRDK----AF 247
++S++ G H A +L + ++ +L G G +D
Sbjct: 374 IFNSLVHAYCTSG-DHSYA---YKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLL 429
Query: 248 EIVELLYKKGFC-------VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
++ E Y + + + + LC GK +A ++ + D + V
Sbjct: 430 DLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKV 489
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+ LC +++ AF L E+ GL ++ +V + G +E+A
Sbjct: 490 LNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 156/357 (43%), Gaps = 20/357 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G P T+N L++ SA +D A +VFE M++ ++ D +Y+ +I+ C+ G
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 64 KA-EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-D 121
KA EKL D + G + +Y + Q + +++ ++G Q
Sbjct: 275 KAMEKLRD--------METRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVP 326
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
P ++ VI G C+EG GY + M+R+ P+V IY LIDG+ + A+ L
Sbjct: 327 PHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLH 386
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
+M+ + P T+ ++ L + G E+ + N + I+ L G
Sbjct: 387 RMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAG 446
Query: 242 HRDKAFEIVELLYKKGFCVK----IEEVVQFLCKRGKLPEARKLLLFS-LKNHHNVDIDL 296
D+A + E + +KG C + ++ K K+ EA + LF ++ D +
Sbjct: 447 RVDEAERLFEEMSEKG-CTRDSYCYNALIDAFTKHRKVDEA--IALFKRMEEEEGCDQTV 503
Query: 297 CNAVIL--GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
IL G+ + +R EA L +++KG+ C L T L GKV A I
Sbjct: 504 YTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKI 560
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 146/356 (41%), Gaps = 40/356 (11%)
Query: 15 NTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFE 74
N LI S G ++E L V+ MK + +Y+ L+ L D AE++F+ +
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 75 KEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHC 133
I +P +Y + + C+ G+T+KA LR + RG + D ++YMT+I
Sbjct: 251 GRI-------KPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACY 303
Query: 134 REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTS 193
+ + + L M + + +I G ++ K E M++ P +
Sbjct: 304 ADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVA 363
Query: 194 TWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELL 253
+ ++ + G ++ R+ M+D + ++
Sbjct: 364 IYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDV-------------------------- 397
Query: 254 YKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEA 313
V VV LCK G++ EA + ++ +++I GL + RV EA
Sbjct: 398 ------VTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEA 451
Query: 314 FGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYS 369
L E+ EKG ++ C N L+ A KV+EA + KR+ E D++V +Y+
Sbjct: 452 ERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYT 507
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 156/384 (40%), Gaps = 48/384 (12%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G PD T+NT+I +C AG +A++ +M+ AD +Y +I+ D+
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS 124
L+ E+ EK G Q ++ + LC+ GK + V ++++G++ ++
Sbjct: 311 CVALYQEMDEK-------GIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVA 363
Query: 125 YMTVIM-GHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME----- 178
TV++ G+ + G+ E+ LL M+ F PDV Y +++G + + A++
Sbjct: 364 IYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC 423
Query: 179 -----TLEKMLKSSYLP------KTSTWHSILARLLEKGFPHES----ARVTVMMLDRNI 223
+ M SS + + + + EKG +S A + R +
Sbjct: 424 RFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKV 483
Query: 224 RQNINL--------------STKSIEL--LFGHGHRDKAFEIVELLYKKGFCVK---IEE 264
+ I L T +I L +F ++A ++ +++ KG
Sbjct: 484 DEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRA 543
Query: 265 VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKG 324
+ LC GK+ A K+L L + C +I LC+ R+ EA L + E+G
Sbjct: 544 LSTGLCLSGKVARACKIL-DELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERG 602
Query: 325 LHQELTCLNDLVTALEARGKVEEA 348
++ AL GK + A
Sbjct: 603 REVPGRIRTVMINALRKVGKADLA 626
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 9/182 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D GF PD T++ +++ C G ++EAL F + + +S YS LI L + G D
Sbjct: 390 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVD 449
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
+AE+LF+E+ EK G + Y + +H K +A + +++ + D
Sbjct: 450 EAERLFEEMSEK-------GCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQT 502
Query: 124 SYMTVIM--GHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
Y I+ G +E E +L M+ + P + L G K A + L+
Sbjct: 503 VYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILD 562
Query: 182 KM 183
++
Sbjct: 563 EL 564
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 8/202 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P T+NTLIH ++ A + ++ + DS +Y+ILI CQ GD KA
Sbjct: 357 GMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKA 416
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
L DE+ G QP +Y + LC KTR+A+ + +++ +G + L
Sbjct: 417 FALHDEMMTD-------GIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVM 469
Query: 126 MTVIM-GHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
M +M GHC G + + LL M PD Y+CL+ G + K A E + +M
Sbjct: 470 MNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMK 529
Query: 185 KSSYLPKTSTWHSILARLLEKG 206
+ P +++++++ +KG
Sbjct: 530 RRGIKPDHISYNTLISGYSKKG 551
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 149/352 (42%), Gaps = 24/352 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P T T N ++ ++ A + +M ++ ++ +++I+I LC+ G KA
Sbjct: 185 GFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKA 244
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ ++ FG +P +Y + Q G+ A ++ ++ +G Q D +
Sbjct: 245 KGFLG-------IMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQT 297
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ C EG E+L M +PD Y+ LI G +A ++M+
Sbjct: 298 YNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMV 354
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQ-NINLSTKSIELLFG---- 239
K +P T+++++ G E+ +L R IR+ I L + + +L
Sbjct: 355 KQGMVPTFYTYNTLI-----HGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQ 409
Query: 240 HGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL 296
HG KAF + + + G ++ LC++ K EA +L + D+ +
Sbjct: 410 HGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVM 469
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
N ++ G C I + AF L E+ ++ + N L+ L GK EEA
Sbjct: 470 MNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEA 521
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 142/350 (40%), Gaps = 55/350 (15%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PD T+N ++ C+ G E L+ MK + DS SY+ILIR GD + A
Sbjct: 290 GFQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYNILIRGCSNNGDLEMA 346
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
DE+ ++ +V P +Y + L K AE ++R+I ++G D ++
Sbjct: 347 FAYRDEMVKQGMV-------PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVT 399
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G+C+ G + + L M+ P Y LI +K+K A E EK++
Sbjct: 400 YNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVV 459
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH---G 241
P ++M++ L+ GH G
Sbjct: 460 GKGMKPD------------------------LVMMN--------------TLMDGHCAIG 481
Query: 242 HRDKAFEI---VELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
+ D+AF + ++++ V +++ LC GK EAR+L+ + D N
Sbjct: 482 NMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYN 541
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+I G + AF + E++ G + L N L+ L + E A
Sbjct: 542 TLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELA 591
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 41/194 (21%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD NTL+ HC+ GN+D A + + M + D +Y+ L+R LC G +++A
Sbjct: 462 GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEA 521
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
+L E+ + I KP D +SY
Sbjct: 522 RELMGEMKRRGI--------------KP---------------------------DHISY 540
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
T+I G+ ++G ++ + + ML F P + Y+ L+ G + + LA E L +M
Sbjct: 541 NTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKS 600
Query: 186 SSYLPKTSTWHSIL 199
+P S++ S++
Sbjct: 601 EGIVPNDSSFCSVI 614
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 9/206 (4%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G+ G PD +F IH++C AG++ A KV + MK + + + +++ +I+ LC+
Sbjct: 270 GNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKV 329
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK-RGTQD 121
D A L DE+ +K G+ P +Y I Y C+H + +A ++L ++ + + D
Sbjct: 330 DDAYLLLDEMIQK-------GANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPD 382
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPL-LAMETL 180
+Y V+ R G ++ E+ M R F P V Y +I G ++K L A
Sbjct: 383 RHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYF 442
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKG 206
E M+ P ++T + RL+ G
Sbjct: 443 EMMIDEGIPPYSTTVEMLRNRLVGWG 468
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 30/287 (10%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P + L+HS C +++ A + F K F + + +YSIL+R + D A
Sbjct: 168 GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGA 227
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
K+FDE+ E+ V+ +Y + LC+ G ++ +++ G + D S
Sbjct: 228 RKVFDEMLERNCVVDLL-------AYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYS 280
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ I +C G + Y++L M R D +P+V ++ +I + +K A L++M+
Sbjct: 281 FAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMI 340
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMM--LDRNI----RQNINLSTKSIELLF 238
+ P T T++SI+A + E R T ++ +DR R N+ K LL
Sbjct: 341 QKGANPDTWTYNSIMAYHCDHC---EVNRATKLLSRMDRTKCLPDRHTYNMVLK---LLI 394
Query: 239 GHGHRDKAFEIVELLYKKGF-------CVKIEEVVQFLCKRGKLPEA 278
G D+A EI E + ++ F V I +V+ K+GKL EA
Sbjct: 395 RIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVR---KKGKLEEA 438
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 9/216 (4%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D +N L+ + C +G++D K+F+ M N + D+ S++I I C GD A K+
Sbjct: 242 DLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVL 301
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTV 128
D + ++V P ++ I + LC++ K A +L +++++G D +Y ++
Sbjct: 302 DRMKRYDLV-------PNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSI 354
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
+ HC +LL M R LPD Y+ ++ ++ + A E E M + +
Sbjct: 355 MAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKF 414
Query: 189 LPKTSTWHSILARLL-EKGFPHESARVTVMMLDRNI 223
P +T+ ++ L+ +KG E+ R MM+D I
Sbjct: 415 YPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGI 450
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 144/357 (40%), Gaps = 17/357 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P TF +L++ C + +AL +F+ M + Y+ +I LC+ D A
Sbjct: 146 GHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNA 205
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
L + + EK+ G P +Y + LC G+ A R++ + KR D +
Sbjct: 206 LDLLNRM-EKD------GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ +I +EG E M+RR PD+ Y LI G + A E M+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
P T+ ++ + ++ M R + +N T I+ G+
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQ---GYCRAG 375
Query: 245 KAFEIVELLYKKGFCVKIEEVVQF------LCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
K E+ + FC ++ + LC GK+ +A +L KN + DI N
Sbjct: 376 KLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYN 435
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
+I G+C+ V +A+ + L +GL ++ ++ L +G EA + +++
Sbjct: 436 IIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 92/187 (49%), Gaps = 8/187 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T++ LI+ +C + ++ +K+F M V ++ +Y+ILI+ C+ G + A
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVA 380
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
E++F + +V C G P +Y + LC++GK KA +L + K G D ++
Sbjct: 381 EEIF-----RRMVFC--GVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVT 433
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C+ G + +++ + + +PD+ Y ++ G +K A KM
Sbjct: 434 YNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMK 493
Query: 185 KSSYLPK 191
+ LP
Sbjct: 494 EDGILPN 500
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 140/333 (42%), Gaps = 11/333 (3%)
Query: 27 LDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQP 86
LD++L +F +M + A +S L+ + + YD L++++ G
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ-------MLGIPH 114
Query: 87 LAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYMTVIMGHCREGAYENGYELL 145
+ + C + A L +++K G + + ++ +++ G CR + +
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 146 IWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEK 205
M+ + P+V IY+ +IDG + + A++ L +M K P T++S+++ L
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS 234
Query: 206 GFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKI 262
G ++ R+ M R I ++ I+ G +A E E + ++ V
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294
Query: 263 EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVE 322
++ LC +L EA ++ F + D+ + +I G C+ +V L E+ +
Sbjct: 295 SLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354
Query: 323 KGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
+G+ + L+ GK+ A I +R+
Sbjct: 355 RGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 8/201 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+N +I S C +G +A ++ +M Q+ D ++S LI + +A
Sbjct: 40 GIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEA 99
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
E+++ E+ I P +Y + C+ + A+R+L + +G + D ++
Sbjct: 100 EEIYKEMLRWSIF-------PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVT 152
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ T+I G+C+ +NG E+ M RR + + Y LI GF Q A + L +M+
Sbjct: 153 FSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI 212
Query: 185 KSSYLPKTSTWHSILARLLEK 205
P T+H +LA L K
Sbjct: 213 SCGVAPDYITFHCMLAGLCSK 233
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 83/181 (45%), Gaps = 8/181 (4%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
+PD TF+ LI++ + EA ++++ M + + + +Y+ +I C++ D A+
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSY 125
++ D + K G P ++ + C+ + + ++ +RG + ++Y
Sbjct: 136 RMLDSMASK-------GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTY 188
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
T+I G C+ G + +LL M+ PD + C++ G K + A LE + K
Sbjct: 189 TTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Query: 186 S 186
S
Sbjct: 249 S 249
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SPD TF+TLI+ +C A +D +++F M + A++ +Y+ LI CQ GD D A
Sbjct: 145 GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 204
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK 116
+ L +E+ + C G P ++ + LC + RKA +L + K
Sbjct: 205 QDLLNEM-----ISC--GVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 87/205 (42%), Gaps = 8/205 (3%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G D ++ C GN A +F M + + +Y+ +I + C G +
Sbjct: 2 GQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRW 61
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QD 121
A++L + EK+I P ++ + + K +AE + +++++
Sbjct: 62 SDADQLLRHMIEKQI-------NPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPT 114
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
++Y ++I G C++ ++ +L M + PDV + LI+G+ + + ME
Sbjct: 115 TITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFC 174
Query: 182 KMLKSSYLPKTSTWHSILARLLEKG 206
+M + + T T+ +++ + G
Sbjct: 175 EMHRRGIVANTVTYTTLIHGFCQVG 199
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 139/319 (43%), Gaps = 41/319 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+T TFN L + C+ N E E M+ D +Y+ L+ + C+RG +A
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L+ ++ + +V P +Y + + LC+ G+ R+A + +++ RG + D +S
Sbjct: 291 FYLYKIMYRRRVV-------PDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMS 343
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I +C+EG + +LL ML +PD +++GF+++ + L A+ + ++
Sbjct: 344 YNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELR 403
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ ++ L ++G P + +LDR I + GH
Sbjct: 404 RLKVDIPFEVCDFLIVSLCQEGKPFAAKH----LLDRIIEE--------------EGHEA 445
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNV-DIDLCNAVILG 303
K L+ C IEE L +GK LKN + V D A+I
Sbjct: 446 KPETYNNLIESLSRCDAIEEA---LVLKGK-----------LKNQNQVLDAKTYRALIGC 491
Query: 304 LCEINRVLEAFGLCYELVE 322
LC I R EA L E+ +
Sbjct: 492 LCRIGRNREAESLMAEMFD 510
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 153/363 (42%), Gaps = 52/363 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PD T+NTL+ S+C G L EA +++ M +V D +Y+ LI+ LC+ G +A
Sbjct: 266 GFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREA 325
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+ F + ++ G +P SY + C+ G ++++++L +++ D +
Sbjct: 326 HQTFHRMVDR-------GIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFT 378
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
++ G REG + ++ + R E+ D LI Q+ KP A L++++
Sbjct: 379 CKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRII 438
Query: 185 -KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ + K T+++++ L E+ +++ + QN L K+ L G
Sbjct: 439 EEEGHEAKPETYNNLIESLSRCDAIEEA----LVLKGKLKNQNQVLDAKTYRALIG---- 490
Query: 244 DKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
C LC+ G+ EA L+ + D +C A++ G
Sbjct: 491 ---------------C---------LCRIGRNREAESLMAEMFDSEVKPDSFICGALVYG 526
Query: 304 LC------EINRVLEAFGLCYELVEKGLHQEL---TCLN--DLVTALEARGKVEEAAFIS 352
C + R+L F + + + + + L C ALE + +++ F+
Sbjct: 527 YCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVP 586
Query: 353 KRI 355
R+
Sbjct: 587 NRL 589
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 163/355 (45%), Gaps = 14/355 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P +N ++ + G D AL V+E+ K + +S ++ IL++ LC+ G ++
Sbjct: 223 GFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEM 282
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--L 123
++ + E LCK P +Y + + L G + RV + M+R P +
Sbjct: 283 LEILQRMREN---LCK----PDVFAYTAMIKTLVSEGNLDASLRVWDE-MRRDEIKPDVM 334
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y T+++G C++G E GYEL + M + L D EIY LI+GF+ K A E +
Sbjct: 335 AYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDL 394
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ S Y+ +++++ L ++ ++ + ++ + + + I + + +R
Sbjct: 395 VDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFE-TLSPIMVAYVVMNR 453
Query: 244 DKAFE-IVELLYKKGFCVK--IEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
F ++E + + G+ V + + + LC + + + LK + + + N +
Sbjct: 454 LSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNIL 513
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
+ L ++ + ++ L YE+ + G + + + + +G V+ A ++I
Sbjct: 514 MEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKI 568
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 114/244 (46%), Gaps = 8/244 (3%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
F PD + L+ C AG + EA KVF+ MK + + +YSI+I LC+ G +A
Sbjct: 251 FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAH 310
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSY 125
+F ++ + G P A ++ + + + G+T K +V Q+ K G + D ++Y
Sbjct: 311 DVFADMLDS-------GCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITY 363
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+I HCR+ EN ++L M+++ + ++ + +K A KM++
Sbjct: 364 NFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMME 423
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
+ P T T++ ++ + ++ M D+ + N+N + + G GH +
Sbjct: 424 AKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNN 483
Query: 246 AFEI 249
A+++
Sbjct: 484 AYKL 487
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G +P+ TFN L+ H AG ++ L+V+ MK D+ +Y+ LI C+ + +
Sbjct: 318 DSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLE 377
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
A K+ + + +K+ C+ A+++ IF+Y+ + A R+ ++M+ + +
Sbjct: 378 NAVKVLNTMIKKK---CEVN----ASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNT 430
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
++Y ++ + + ++ M ++ P+V Y L+ F A + ++
Sbjct: 431 VTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKE 490
Query: 183 MLKSSYL-PKTSTWHSILARLLEKG 206
M++ L P S + +LA+L G
Sbjct: 491 MVEEKCLTPSLSLYEMVLAQLRRAG 515
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 152/351 (43%), Gaps = 16/351 (4%)
Query: 7 FSPDTCT---FNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ P C F L+ ++ AG + ++++F + +F V S + L+ L Q +D
Sbjct: 113 YPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFD 172
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
+F E FG P + + + LC+ A +VL +I G +
Sbjct: 173 LVHAMFKNSKES------FGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNL 226
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
++Y T++ G+ G E+ +L ML R + PD Y L+DG+ + + A ++
Sbjct: 227 VTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDD 286
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M K+ P T+ ++ L ++ E+ + ML+R+ + +L K I+ L
Sbjct: 287 MEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHK 346
Query: 243 RDKAFEIVELLYKKGFCVK----IEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
D+A + + K C+ + ++ +LCK G++ EARK L + + N
Sbjct: 347 VDEACGLWRKMLKNN-CMPDNALLSTLIHWLCKEGRVTEARK-LFDEFEKGSIPSLLTYN 404
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
+I G+CE + EA L ++ E+ N L+ L G V+E
Sbjct: 405 TLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGV 455
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 28/242 (11%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G+ PD T+ L+ +C G EA V ++M+ ++ + +Y ++IR LC+
Sbjct: 254 DRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSG 313
Query: 64 KAEKLFDELFEKEIV----LC------------------------KFGSQPLAASYKPIF 95
+A +FDE+ E+ + LC K P A +
Sbjct: 314 EARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLI 373
Query: 96 QYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLP 155
+LC+ G+ +A ++ + K L+Y T+I G C +G L M R P
Sbjct: 374 HWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKP 433
Query: 156 DVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVT 215
+ Y+ LI+G + + LE+ML+ P +T+ + L + G ++ ++
Sbjct: 434 NAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIV 493
Query: 216 VM 217
M
Sbjct: 494 SM 495
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 136/284 (47%), Gaps = 20/284 (7%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+PD ++NTL+H + G EA +F++++ + +Y+ LI LC+ G+ + A++
Sbjct: 371 APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQR 430
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
L +E+ + I P +Y + + ++G A V +++++G + D +Y
Sbjct: 431 LKEEMTTQLIF-------PDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYT 483
Query: 127 TVIMGHCREGAYENGYELLIWMLRRD-FLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
T +G R G + + L M+ D PD+ IY+ IDG + + A+E K+ +
Sbjct: 484 TRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFR 543
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKS-IELLFGH---G 241
+P T+ +++ LE G ++ + D +R+ + S + L++GH G
Sbjct: 544 VGLVPDHVTYTTVIRGYLENG----QFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAG 599
Query: 242 HRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLL 282
++AF+ + K+G + ++ +CK G + EA + L
Sbjct: 600 RLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYL 643
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 148/356 (41%), Gaps = 25/356 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P TFNT++ S AG+L+ K++ MK + +Y+ILI + G ++A
Sbjct: 233 GIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA 292
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS- 124
+ F ++ F P S+ P+ + C+ G A V +++ G S
Sbjct: 293 RR-----FHGDMRRSGFAVTPY--SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTST 345
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y I C G ++ ELL M PDV Y+ L+ G+++ K + A + +
Sbjct: 346 YNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLR 401
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
P T+++++ L E G + R+ M + I ++ T ++ +G+
Sbjct: 402 AGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLS 461
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSL------KNHHNVDIDLCN 298
A E+ + + +KG +K + G+L F L +HH D+ + N
Sbjct: 462 MATEVYDEMLRKG--IKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYN 519
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKR 354
I GLC++ +++A ++ GL + ++ RG +E F R
Sbjct: 520 VRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVI-----RGYLENGQFKMAR 570
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 105/245 (42%), Gaps = 9/245 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G P T+NTLI C +GNL+ A ++ E M + D +Y+ L++ + G+
Sbjct: 403 GDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSM 462
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP-- 122
A +++DE+ K G +P +Y G + KA R+ +++ P
Sbjct: 463 ATEVYDEMLRK-------GIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDL 515
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
Y I G C+ G E + R +PD Y +I G+L+ + +A ++
Sbjct: 516 TIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDE 575
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
ML+ P T+ ++ + G ++ + + M R +R N+ + + G+
Sbjct: 576 MLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGN 635
Query: 243 RDKAF 247
D+A+
Sbjct: 636 IDEAY 640
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 7/110 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T N L++ C AGN+DEA + M+ + + SY++LI C +++
Sbjct: 615 GVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEV 674
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM 115
KL+ E+ +KEI +P +++ +F++L + ++R+ E + R ++
Sbjct: 675 VKLYKEMLDKEI-------EPDGYTHRALFKHLEKDHESREVEFLERLLL 717
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 112/235 (47%), Gaps = 14/235 (5%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
GG PD ++N L+ ++ +G++ EA+ VF M+ T ++ +YS+L+ Q G YD
Sbjct: 311 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 370
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPL 123
+LF E+ + P AA+Y + + E G ++ + +++ + D
Sbjct: 371 VRQLFLEMKSSN-------TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDME 423
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQK---DKPLLAMETL 180
+Y +I + G +E+ ++L +M D +P + Y +I+ F Q ++ L+A T+
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIE 235
++ + P T+HS+L G ES + ++D I +N + IE
Sbjct: 484 HEVGSN---PSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIE 535
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 9/218 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+NTL+ + G DEA VF M + + D +YS L+ G +
Sbjct: 242 GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETF---GKLRRL 298
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
EK+ D L E + GS P SY + + + G ++A V Q+ G T + +
Sbjct: 299 EKVCDLLGE----MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANT 354
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ + G Y++ +L + M + PD Y+ LI+ F + + M+
Sbjct: 355 YSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMV 414
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRN 222
+ + P T+ I+ KG HE AR + + N
Sbjct: 415 EENIEPDMETYEGIIF-ACGKGGLHEDARKILQYMTAN 451
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 131/305 (42%), Gaps = 32/305 (10%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ +NT+I +C G+++ A VF+ +K ++ +I C+ GD+ +
Sbjct: 235 GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVAS 294
Query: 66 EKLFDELFEK----------EIVLCKF------------------GSQPLAASYKPIFQY 97
++L E+ E+ I+ K+ +P A+Y +
Sbjct: 295 DRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINR 354
Query: 98 LCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
LC+ GK A L + K+G + LSY +I +C+ Y+ +LL+ M R PD
Sbjct: 355 LCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPD 414
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
+ Y LI G + A+ K++ P + ++ +++ L + G + +
Sbjct: 415 IVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFS 474
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRG 273
MLDRNI + + I+ G D+A ++ L +KG V + +++ C+ G
Sbjct: 475 EMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSG 534
Query: 274 KLPEA 278
L EA
Sbjct: 535 MLDEA 539
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+ LIH +G++D+A+ + + + V+ D+A Y++L+ LC+ G + A
Sbjct: 410 GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPA 469
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ LF E+ ++ I+ P A Y + G +A +V +++G + D +
Sbjct: 470 KLLFSEMLDRNIL-------PDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ +I G CR G + + M +PD Y +IDG++++ A++ M
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 185 KSSYLPKTSTWHSIL 199
K+ P T+ S++
Sbjct: 583 KNKCKPNVVTYTSLI 597
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 155/378 (41%), Gaps = 44/378 (11%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD N+L+ + L +A KV++ M + + D+ S IL++ +C G + KL
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 69 FDELFEKEIV------------LCKFGS----------------QPLAASYKPIFQYLCE 100
+ + K + CK G P ++ + C+
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 101 HGKTRKAERVLRQIMKRGTQDPLSYMTVIMGHCREGAYENGY-----ELLIWMLRRDFLP 155
G ++R+L ++ +RG + + ++ I+ + Y +GY E + W++ D P
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNII----DAKYRHGYKVDPAESIGWIIANDCKP 343
Query: 156 DVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVT 215
DV Y+ LI+ ++ K +A+ L++ K +P ++ ++ + ++++
Sbjct: 344 DVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLL 403
Query: 216 VMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKR 272
+ M +R + +I I L GH D A + L +G ++ LCK
Sbjct: 404 LQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKT 463
Query: 273 GKLPEARKLLLFSLKNHHNV--DIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELT 330
G+ A+ LLFS N+ D + +I G EA + VEKG+ ++
Sbjct: 464 GRFLPAK--LLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVV 521
Query: 331 CLNDLVTALEARGKVEEA 348
N ++ G ++EA
Sbjct: 522 HHNAMIKGFCRSGMLDEA 539
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 160/357 (44%), Gaps = 21/357 (5%)
Query: 17 LIHSHCSAGNLDEALKVFENMKN-FQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEK 75
++H++ +G+L +A+++++ + + D + + L+ L + A K++DE
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDE---- 195
Query: 76 EIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCR 134
+C G S + + +C GK +++ +G + + Y T+I G+C+
Sbjct: 196 ---MCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCK 252
Query: 135 EGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTST 194
G EN Y + + + F+P +E + +I+GF K+ +A + L +K L + S
Sbjct: 253 LGDIENAYLVFKELKLKGFMPTLETFGTMINGFC-KEGDFVASDRLLSEVKERGL-RVSV 310
Query: 195 W--HSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVEL 252
W ++I+ G+ + A ++ + + ++ I L G ++ A ++
Sbjct: 311 WFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDE 370
Query: 253 LYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINR 309
KKG + ++Q CK + A KLLL + DI +I GL
Sbjct: 371 ASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGH 430
Query: 310 VLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVL 366
+ +A + +L+++G+ + N L++ L G+ F+ ++ E LDR++L
Sbjct: 431 MDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGR-----FLPAKLLFSEMLDRNIL 482
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 8/210 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G SPD +N L+ C G A +F M + + D+ Y+ LI + GD+D
Sbjct: 443 DRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFD 502
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
+A K+F EK G + + + + C G +A + ++ + D
Sbjct: 503 EARKVFSLSVEK-------GVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDK 555
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y T+I G+ ++ ++ +M + P+V Y LI+GF + +A ET ++
Sbjct: 556 FTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKE 615
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESA 212
M +P T+ +++ L ++ E A
Sbjct: 616 MQLRDLVPNVVTYTTLIRSLAKESSTLEKA 645
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 9/167 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D N +I C +G LDEAL M + D +YS +I ++ D A
Sbjct: 515 GVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATA 574
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
K+F + + + CK P +Y + C G + AE +++ R + ++
Sbjct: 575 IKIFRYMEKNK---CK----PNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVT 627
Query: 125 YMTVIMGHCREGA-YENGYELLIWMLRRDFLPDVEIYDCLIDGFLQK 170
Y T+I +E + E M+ +P+ ++CL+ GF++K
Sbjct: 628 YTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKK 674
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 154/353 (43%), Gaps = 43/353 (12%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
S DT T+NT+I C G DEA + M + D+ SY+ LI C+ G++ +A+
Sbjct: 157 ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAK 216
Query: 67 KLFDELFEKEIV---------------------LCKFGSQPLAASYKPIFQYLCEHGKTR 105
L DE+ E ++ + G P ++ I LC+ GK
Sbjct: 217 ALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVL 276
Query: 106 KAERVLRQIMKRGT-QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLI 164
+ +LR++ + + ++Y T++ + Y + L M+ R D+ +Y L+
Sbjct: 277 EGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLM 336
Query: 165 DGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIR 224
DG + A +T + +L+ + +P T+ +++ L + G + + ML++++
Sbjct: 337 DGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVI 396
Query: 225 QNINLSTKSIELLFGHGHRDKAFEIVELLYK--------KGFCVKIEEVVQFLCKRGK-- 274
N+ + I G+ + E V LL K GF V+ L K GK
Sbjct: 397 PNVVTYSSMIN---GYVKKGMLEEAVSLLRKMEDQNVVPNGFTYG--TVIDGLFKAGKEE 451
Query: 275 --LPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGL 325
+ ++++ L ++ ++ + +A++ L I R+ E GL ++V KG+
Sbjct: 452 MAIELSKEMRLIGVEENNYI----LDALVNHLKRIGRIKEVKGLVKDMVSKGV 500
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 153/374 (40%), Gaps = 41/374 (10%)
Query: 14 FNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG-DYDKAEKLFDEL 72
F+TL + S L A + M F V DS ++ LI G +D+ ++ ++
Sbjct: 61 FHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKM 120
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGH 132
+ C G P + + C+ G+ A +LR + + D ++Y TVI G
Sbjct: 121 -----IAC--GVSPDVFALNVLIHSFCKVGRLSFAISLLRN--RVISIDTVTYNTVISGL 171
Query: 133 CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQ-----KDKPLL------------ 175
C G + Y+ L M++ LPD Y+ LIDGF + + K L+
Sbjct: 172 CEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHT 231
Query: 176 -----------AMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIR 224
E M+ S + P T+ SI+ RL + G E + M + ++
Sbjct: 232 ILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVY 291
Query: 225 QNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKL 281
N T ++ LF A + + +G V + ++ L K G L EA K
Sbjct: 292 PNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKT 351
Query: 282 LLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEA 341
L+++ ++ A++ GLC+ + A + +++EK + + + ++
Sbjct: 352 FKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVK 411
Query: 342 RGKVEEAAFISKRI 355
+G +EEA + +++
Sbjct: 412 KGMLEEAVSLLRKM 425
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PD TF+++I+ C G + E + M+ V + +Y+ L+ +L + Y A
Sbjct: 254 GFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHA 313
Query: 66 EKLFDELFEKEIVLCKFGSQPL-AASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPL 123
L+ ++ + I P+ Y + L + G R+AE+ + +++ + +
Sbjct: 314 LALYSQMVVRGI--------PVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVV 365
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y ++ G C+ G + ++ ML + +P+V Y +I+G+++K A+ L KM
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425
Query: 184 LKSSYLPKTSTWHSILARLLEKG 206
+ +P T+ +++ L + G
Sbjct: 426 EDQNVVPNGFTYGTVIDGLFKAG 448
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 139/334 (41%), Gaps = 23/334 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TFN +++S G+ + LK+++ MK+ + S +I++ LC+ G ++A
Sbjct: 568 GIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEA 627
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ +++ EI P +Y+ +H + + ++ G +
Sbjct: 628 IHILNQMMLMEI-------HPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQV 680
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I C+ G + ++ M R F+PD ++ L+ G+ A+ T M+
Sbjct: 681 YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM 740
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
++ P +T+++I+ L + G E + M R +R + I G+
Sbjct: 741 EAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMK 800
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+ I + G K ++ GK+ +AR+LL K + + +I
Sbjct: 801 GSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMI 860
Query: 302 LGLC--------EINR----VLEAFGLCYELVEK 323
GLC E N+ + EA GL E+VE+
Sbjct: 861 SGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEE 894
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G SP+ T+NT+I AG + E K MK+ + D +Y+ LI + G+
Sbjct: 741 EAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMK 800
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
+ ++ E+ +V P ++Y + GK +A +L+++ KRG + +
Sbjct: 801 GSMTIYCEMIADGLV-------PKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNT 853
Query: 123 LSYMTVIMGHCR 134
+Y T+I G C+
Sbjct: 854 STYCTMISGLCK 865
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 8/140 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D + L+ AG+L EA K F+ + + +Y+ L+ LC+ GD A
Sbjct: 324 GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSA 383
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
E + ++ EK ++ P +Y + + G +A +LR++ + + +
Sbjct: 384 EFIITQMLEKSVI-------PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFT 436
Query: 125 YMTVIMGHCREGAYENGYEL 144
Y TVI G + G E EL
Sbjct: 437 YGTVIDGLFKAGKEEMAIEL 456
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/390 (20%), Positives = 159/390 (40%), Gaps = 52/390 (13%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P+ +NTL+H+ C G + A + MK + +++ILI C ++
Sbjct: 212 GVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQS 267
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L ++ F G P + + + LC G+ +A VL ++ +G + D ++
Sbjct: 268 MVLLEKCFS-------LGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVA 320
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
T++ G+C G I M R+ +LP+VE Y+ LI G+ A++T M
Sbjct: 321 CNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMK 380
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKS----------- 233
+ +T+++++ L G + ++ MM D + + +
Sbjct: 381 TDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENR 440
Query: 234 ----------IELLFGHGHRDKAFEIVELLYKKGF------------------CVKIEEV 265
+E LF D++F+++ L K G + +
Sbjct: 441 WEDALEFLLKMEKLFPRA-VDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCL 499
Query: 266 VQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGL 325
+ + GK+ E+ +L+ + + NAVI+G C+ ++V+ ++ E+G
Sbjct: 500 IHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGC 559
Query: 326 HQELTCLNDLVTALEARGKVEEAAFISKRI 355
+ N L+ L +G +++A + R+
Sbjct: 560 VPDTESYNPLLEELCVKGDIQKAWLLFSRM 589
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 43/254 (16%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ P+ T+N LI +C G LD AL F +MK + + A+++ LIR L G D
Sbjct: 348 GYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDG 407
Query: 66 EKLFDELFEKEIV------------------------------LCKFGSQPLAASYKPIF 95
K+ + + + + V + K + + S+K I
Sbjct: 408 LKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLI- 466
Query: 96 QYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGHC------REGAYENGYELLIWML 149
LCE G + Q++ G ++I+ HC + G E EL+ M+
Sbjct: 467 -SLCEKGGMDDLKTAYDQMIGEG-----GVPSIIVSHCLIHRYSQHGKIEESLELINDMV 520
Query: 150 RRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPH 209
R +LP ++ +I GF ++DK + ++ +E M + +P T +++ +L L KG
Sbjct: 521 TRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQ 580
Query: 210 ESARVTVMMLDRNI 223
++ + M++++I
Sbjct: 581 KAWLLFSRMVEKSI 594
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVT--ADSASYSILIRNLCQRGDYDKA----- 65
TFNTLI G D+ LK+ E M++ A Y+ +I + ++ A
Sbjct: 390 TFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLL 449
Query: 66 --EKLFDELFEKE---IVLC-KFGSQPLAASYKP---------------IFQYLCEHGKT 104
EKLF ++ I LC K G L +Y + +HGK
Sbjct: 450 KMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKI 509
Query: 105 RKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCL 163
++ ++ ++ RG ++ VI+G C++ NG + + M R +PD E Y+ L
Sbjct: 510 EESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPL 569
Query: 164 IDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPH 209
++ K A +M++ S +P S W S++ L +K H
Sbjct: 570 LEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIH 615
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ P + TFN +I C + +K E+M D+ SY+ L+ LC +GD KA
Sbjct: 523 GYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKA 582
Query: 66 EKLFDELFEKEIV 78
LF + EK IV
Sbjct: 583 WLLFSRMVEKSIV 595
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 156/361 (43%), Gaps = 25/361 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PD F+ ++ C +++A++ + MK+ ++ S +I+ + + A
Sbjct: 375 GLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAA 434
Query: 66 EKLFDELFEKEIV---LCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-D 121
++F++ FE I +C IF C+ GK A L+ + ++G + +
Sbjct: 435 LEIFNDSFESWIAHGFMCN-----------KIFLLFCKQGKVDAATSFLKMMEQKGIEPN 483
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+ Y +++ HCR + + ML + P+ Y LIDGF + A + +
Sbjct: 484 VVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVIN 543
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKS----IELL 237
+M S++ +++I+ L + G ++++ M+ + + ++S S I+
Sbjct: 544 QMNASNFEANEVIYNTIINGLCKVG---QTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGF 600
Query: 238 FGHGHRDKAFEIVELLYKKG---FCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDI 294
G D A E + + G V ++ CK ++ A ++ +D+
Sbjct: 601 VKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDL 660
Query: 295 DLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKR 354
A+I G C+ N + A+ L EL E GL ++ N L++ GK++ A + K+
Sbjct: 661 PAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKK 720
Query: 355 I 355
+
Sbjct: 721 M 721
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 105/222 (47%), Gaps = 8/222 (3%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
+ G SP+ TF +LI+ C + +D AL++ MK+ ++ D +Y LI C++ D
Sbjct: 617 SENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDM 676
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-D 121
A LF EL E G P + Y + GK A + ++++ G D
Sbjct: 677 KTAYTLFSELPE-------LGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCD 729
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+Y T+I G ++G +L +L +PD ++ L++G +K + L A + LE
Sbjct: 730 LFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLE 789
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI 223
+M K P + +++A +G +E+ R+ ML++ I
Sbjct: 790 EMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGI 831
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 146/351 (41%), Gaps = 46/351 (13%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENM-KNFQVTADSASYSILIRNLCQRGDYD 63
F + +NT+I+ C G +A ++ +N+ K + + SY+ +I + GD D
Sbjct: 548 SNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTD 607
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
A + + E+ E G P ++ + C+ + A + ++ + D
Sbjct: 608 SAVETYREMSEN-------GKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDL 660
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y +I G C++ + Y L + +P+V +Y+ LI GF K A++ +K
Sbjct: 661 PAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKK 720
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M+ T+ +++ LL+ G NINL++ L G
Sbjct: 721 MVNDGISCDLFTYTTMIDGLLKDG-------------------NINLASDLYSELLDLGI 761
Query: 243 RDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
EI+ ++ G L K+G+ +A K+L K ++ L + VI
Sbjct: 762 VPD--EILHMVLVNG-----------LSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIA 808
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISK 353
G + EAF L E++EKG+ + T N LV+ G+VE+ SK
Sbjct: 809 GHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVS-----GRVEKPPAASK 854
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 156/358 (43%), Gaps = 15/358 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY-DK 64
G SP+ ++NTLI CS N+D+AL +F M + + + + +I++ LCQ+G +
Sbjct: 186 GPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNN 245
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLC-EHGKTRKAERVLRQIMKRGT-QDP 122
+KL +E+ + + PL I C ++G +A V +++ ++ D
Sbjct: 246 NKKLLEEILDSS-----QANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADS 300
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+ Y +I G C G Y + M++R PDV Y+ LI ++ K A +
Sbjct: 301 VVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGT 360
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M P ++ I+ L G + + + ML ++ + L I+ +G
Sbjct: 361 MQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGD 420
Query: 243 RDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEAR--KLLLFSLKNHHNVDIDLC 297
A ++ L+ G + ++ K G+L +A K + S K H D
Sbjct: 421 TSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHP--DTTTY 478
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
N ++ C + + AF L E++ +G ++ +LV L +G++++A + RI
Sbjct: 479 NLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRI 536
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 109/252 (43%), Gaps = 8/252 (3%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D+ +N +I CS+GN+ A +M V D +Y+ LI LC+ G +D+A L
Sbjct: 299 DSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLH 358
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKA-ERVLRQIMKRGTQDPLSYMTV 128
+ G P SYK I Q LC HG +A E +L + + L + V
Sbjct: 359 GTMQNG-------GVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVV 411
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
I G+ R G + +L ML P+V + LI G+++ + + A +M +
Sbjct: 412 IDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKI 471
Query: 189 LPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFE 248
P T+T++ +L G + ++ ML R + +I T+ + L G KA
Sbjct: 472 HPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAES 531
Query: 249 IVELLYKKGFCV 260
++ + G +
Sbjct: 532 LLSRIQATGITI 543
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 152/351 (43%), Gaps = 15/351 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P T N L++ C AG +++A + M+ + + SY+ LI+ LC + DKA
Sbjct: 151 GVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKA 210
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKT-RKAERVLRQIMKRGTQD-PL 123
LF+ + K+G +P + I LC+ G +++L +I+ + PL
Sbjct: 211 LYLFNTMN-------KYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPL 263
Query: 124 SYM--TVIMGHC-REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
+ T++M C + G E+ M +++ D +Y+ +I G + A +
Sbjct: 264 DIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFM 323
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
M+K P T++++++ L ++G E+ + M + + + I+ L H
Sbjct: 324 CDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIH 383
Query: 241 GHRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
G ++A E + + K ++ V+ + G A +L L ++
Sbjct: 384 GDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTN 443
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
NA+I G + R+++A+ + E+ +H + T N L+ A G + A
Sbjct: 444 NALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLA 494
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 146/359 (40%), Gaps = 17/359 (4%)
Query: 7 FSPDTC--TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
F D C ++++ C G LD AL + + M V +++ L+ LC+ G +K
Sbjct: 115 FDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEK 174
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPL 123
A+ L E+ E G P SY + + LC KA + + K G + + +
Sbjct: 175 ADGLVREMRE-------MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRV 227
Query: 124 SYMTVIMGHCREGAYENGYELLIWML----RRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
+ ++ C++G N + L+ + + + D+ I L+D + + A+E
Sbjct: 228 TCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEV 287
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
++M + + + ++ I+ L G + M+ R + ++ I L
Sbjct: 288 WKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCK 347
Query: 240 HGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL 296
G D+A ++ + G + + ++Q LC G + A + LL LK+ ++ L
Sbjct: 348 EGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLL 407
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
N VI G A + ++ G+ + N L+ G++ +A ++ +
Sbjct: 408 WNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEM 466
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 154/350 (44%), Gaps = 17/350 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+NT+I+++ + V + MK V + +Y++L+ + G A
Sbjct: 254 GIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDA 313
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
EKLFDE+ E+ G + Y + + C G ++A + ++ ++G + +
Sbjct: 314 EKLFDEMRER-------GIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYT 366
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQK---DKPLLAMETLE 181
Y +I G C+ G L+ M + +++ LIDG+ +K D+ + + +E
Sbjct: 367 YGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVME 426
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
+ + + +T S RL E+ + M++ ++ + T I++ G
Sbjct: 427 QKGFQADVFTCNTIASCFNRLKRY---DEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEG 483
Query: 242 HRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
+ ++A + + KG + ++ CK+GK+ EARKL N + D
Sbjct: 484 NVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYT 543
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
++I G C + V EA L E+ KGL Q +++ L GK +EA
Sbjct: 544 SLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEA 593
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 151/345 (43%), Gaps = 20/345 (5%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
MK DG + T+ L+ G + +A K+F+ M+ + +D Y+ LI C++G
Sbjct: 285 MKKDG-VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKG 343
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
+ +A LFDEL EK G P + +Y + +C+ G+ AE ++ ++ +G
Sbjct: 344 NMKRAFLLFDELTEK-------GLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVN 396
Query: 121 -DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
+ + T+I G+CR+G + + M ++ F DV + + F + + A +
Sbjct: 397 ITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQW 456
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
L +M++ T ++ +++ ++G E+ R+ V M + ++ N I
Sbjct: 457 LFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCK 516
Query: 240 HGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL 296
G +A ++ + G ++ C + EA +L FS +D +
Sbjct: 517 QGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRL--FSEMGLKGLDQNS 574
Query: 297 CNAVIL--GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
++ GL + + EAFGL E+ KG T N + TAL
Sbjct: 575 VTYTVMISGLSKAGKSDEAFGLYDEMKRKG----YTIDNKVYTAL 615
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 77/162 (47%), Gaps = 8/162 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+GG T ++ LI +C GN++EA ++F M + V ++ +Y+++I C++G
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
+A KL + G P + +Y + C +A R+ ++ +G Q+
Sbjct: 522 EARKLRANMEAN-------GMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNS 574
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLI 164
++Y +I G + G + + L M R+ + D ++Y LI
Sbjct: 575 VTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 141/346 (40%), Gaps = 40/346 (11%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T+ LI + C+A LD A +VFE MK + D +Y L+ D D
Sbjct: 286 DEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLD 345
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
++ + E+ EK+ G P ++ + LC+ G +A L + +G L
Sbjct: 346 SVKQFWSEM-EKD------GHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNL 398
Query: 124 -SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y T+I G R ++ EL M P Y ID + + + A+ET EK
Sbjct: 399 HTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 458
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M P ++ L L + G E+ ++ + D I L S
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD------IGLVPDS--------- 503
Query: 243 RDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
V +++ K G++ EA KLL ++N D+ + N++I
Sbjct: 504 -----------------VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLIN 546
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
L + +RV EA+ + + E L + N L+ L GK++EA
Sbjct: 547 TLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 592
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 86/203 (42%), Gaps = 15/203 (7%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ +N LI+ AG D A +F+ M V D +YS+L+ LC G D
Sbjct: 919 DYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVD 978
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAER--VLRQIMK--RG- 118
+ F EL E G P Y I L GK+ + E VL MK RG
Sbjct: 979 EGLHYFKELKES-------GLNPDVVCYNLIINGL---GKSHRLEEALVLFNEMKTSRGI 1028
Query: 119 TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME 178
T D +Y ++I+ G E ++ + R P+V ++ LI G+ KP A
Sbjct: 1029 TPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYA 1088
Query: 179 TLEKMLKSSYLPKTSTWHSILAR 201
+ M+ + P T T+ + R
Sbjct: 1089 VYQTMVTGGFSPNTGTYEQLPNR 1111
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+N L+ ++ +G +DE ++++ M + A++ +++I+I L + G+ D A
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS- 124
L+ +L P A +Y P+ L + G+ +A+++ ++ G + +
Sbjct: 875 LDLYYDLMSDR------DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAI 928
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLID 165
Y +I G + G + L M++ PD++ Y L+D
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVD 969
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 156/407 (38%), Gaps = 45/407 (11%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T+NT+I G + EA+ F MK V D + L+ + + +
Sbjct: 636 DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIE 694
Query: 64 KAEKLFDE-----------LFEKEIV-----------------------LCKFGSQPLAA 89
A K+ LF ++++ +C+ G L
Sbjct: 695 DAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILV- 753
Query: 90 SYKPIFQYLCEHGKTRKAERVLRQIMKR-GTQDPL-SYMTVIMGHCREGAYENGYELLIW 147
PI +Y C+H A + + K G Q L +Y +I G E ++ +
Sbjct: 754 ---PIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQ 810
Query: 148 MLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGF 207
+ +PDV Y+ L+D + + K E ++M T T + +++ L++ G
Sbjct: 811 VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 870
Query: 208 PHESARVTV-MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIE 263
++ + +M DR+ I+ L G +A ++ E + G C
Sbjct: 871 VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYN 930
Query: 264 EVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEK 323
++ K G+ A L +K D+ + ++ LC + RV E EL E
Sbjct: 931 ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES 990
Query: 324 GLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYSS 370
GL+ ++ C N ++ L ++EEA + + + + +Y+S
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNS 1037
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 138/352 (39%), Gaps = 50/352 (14%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P T+N LI A ++ A VF +K+ D A+Y+ L+ Y
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDA------YG 831
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
K+ K+ DELFE YK + + CE + +
Sbjct: 832 KSGKI-DELFEL---------------YKEMSTHECE-------------------ANTI 856
Query: 124 SYMTVIMGHCREGAYENGYELLI-WMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
++ VI G + G ++ +L M RDF P Y LIDG + + A + E
Sbjct: 857 THNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEG 916
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
ML P + ++ ++ + G + + M+ +R ++ + ++ L G
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976
Query: 243 RDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFS-LKNHHNVDIDL-- 296
D+ + L + G V ++ L K +L EA L+LF+ +K + DL
Sbjct: 977 VDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA--LVLFNEMKTSRGITPDLYT 1034
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
N++IL L V EA + E+ GL + N L+ GK E A
Sbjct: 1035 YNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHA 1086
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 150/378 (39%), Gaps = 35/378 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+T TFNTL C + ALK+ M + D +Y+ +I L + G +A
Sbjct: 603 GCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Query: 66 EKLFDEL----FEKEIVLCKFGSQPLAAS-----YKPI--FQYLC-EHGKTRKAERVLRQ 113
F ++ + + LC + AS YK I F Y C + E ++
Sbjct: 663 MCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGS 722
Query: 114 IM-KRGTQDPLSYMT--VIMGHCREG------------AYEN--GYELLIWMLRRDF--L 154
I+ + G + +S+ V G CR+G + N G L +D
Sbjct: 723 ILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQ 782
Query: 155 PDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARV 214
P + Y+ LI G L+ D +A + ++ + +P +T++ +L + G E +
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 215 TVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEI-VELLYKKGF---CVKIEEVVQFLC 270
M N I L G+ D A ++ +L+ + F ++ L
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 271 KRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELT 330
K G+L EA++L L + + N +I G + A L +V++G+ +L
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 331 CLNDLVTALEARGKVEEA 348
+ LV L G+V+E
Sbjct: 963 TYSVLVDCLCMVGRVDEG 980
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 97/225 (43%), Gaps = 29/225 (12%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ T+NTLI LD+AL++F NM++ V + +Y + I + GD
Sbjct: 391 DQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSV 450
Query: 64 KAEKLFDELFEK----EIVLCK------------------------FGSQPLAASYKPIF 95
A + F+++ K IV C G P + +Y +
Sbjct: 451 SALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMM 510
Query: 96 QYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
+ + G+ +A ++L ++M+ G + D + ++I + + +++ + M
Sbjct: 511 KCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLK 570
Query: 155 PDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSIL 199
P V Y+ L+ G + K A+E E M++ P T T++++
Sbjct: 571 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 615
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/399 (21%), Positives = 157/399 (39%), Gaps = 37/399 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF + ++N LIH + EA++V+ M +YS L+ L +R D D
Sbjct: 183 GFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSV 242
Query: 66 EKLFDEL----------------------------FEKEIVLCKFGSQPLAASYKPIFQY 97
L E+ +E + G P +Y +
Sbjct: 243 MGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDA 302
Query: 98 LCEHGKTRKAERVLRQIMKRGTQDP--LSYMTVIMGHCREGAYENGYELLIWMLRRDFLP 155
LC K A+ V + MK G P ++Y+T++ ++ + M + +P
Sbjct: 303 LCTARKLDCAKEVFEK-MKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 156 DVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVT 215
DV + L+D + A +TL+ M LP T+++++ LL ++ +
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 216 VMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKR 272
M ++ I+ G A E E + KG V + L K
Sbjct: 422 GNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA 481
Query: 273 GKLPEARKLLLFSLKNHHNV-DIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTC 331
G+ EA++ + + LK+ V D N ++ ++ + EA L E++E G ++
Sbjct: 482 GRDREAKQ-IFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIV 540
Query: 332 LNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYSS 370
+N L+ L +V+EA + R+ ++ L +V++Y++
Sbjct: 541 VNSLINTLYKADRVDEAWKMFMRMKEMK-LKPTVVTYNT 578
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 152/360 (42%), Gaps = 46/360 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ +N LIH HC +GN+ EA+ + M++ ++ D +Y+ILI LC +A
Sbjct: 334 GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEA 393
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+LF ++ + I P +A+Y + C+ +A + ++ G + + ++
Sbjct: 394 NRLFQKMKNERIF-------PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIIT 446
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ T+I G+C + L M + +PDV Y LID ++ A+ ML
Sbjct: 447 FSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDML 506
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
++ P T+ ++ GF E R++V +I+ + +
Sbjct: 507 EAGIHPNDHTFACLV-----DGFWKE-GRLSV----------------AIDFYQENNQQR 544
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL-- 302
+ V GF IE LC+ G + A + FS + D+C+ V +
Sbjct: 545 SCWNHV------GFTCLIEG----LCQNGYILRASR--FFSDMRSCGITPDICSYVSMLK 592
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI--SKRIPGLEN 360
G + R+ + L ++++ G+ L L +A G V+ A F+ S R+ + N
Sbjct: 593 GHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSRLKTVSN 652
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 8/195 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ + I C ++EA K+FE MK V + +YS +I C+ G+ +A
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
L+ E+ E++ P + + C+ + A + ++K G L
Sbjct: 289 YGLYKEILVAELL-------PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYV 341
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I GHC+ G LL M + PDV Y LI+G +D+ A +KM
Sbjct: 342 YNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMK 401
Query: 185 KSSYLPKTSTWHSIL 199
P ++T++S++
Sbjct: 402 NERIFPSSATYNSLI 416
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 138/348 (39%), Gaps = 17/348 (4%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SPD+ ++++ D ++ M + + D Y +L + ++G Y K EK
Sbjct: 161 SPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEK 220
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYM 126
L DE+ G +P Y LC K +AE++ + K G L +Y
Sbjct: 221 LLDEM-------TSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYS 273
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+I G+C+ G Y L +L + LP+V ++ L+DGF + + + A M+K
Sbjct: 274 AMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKF 333
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P ++ ++ + G E+ + M N+ ++ T L+ G D+
Sbjct: 334 GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTI---LINGLCIEDQV 390
Query: 247 FEIVELLYKKG------FCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
E L K ++ CK + +A L + +I + +
Sbjct: 391 AEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTL 450
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
I G C + + A GL +E+ KG+ ++ L+ A ++EA
Sbjct: 451 IDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEA 498
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 150/330 (45%), Gaps = 21/330 (6%)
Query: 2 KGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVT-ADSASYSILIRNLCQRG 60
K + G P+TC FN L+ HC G+++ A V E MK ++ +S +YS L+ L
Sbjct: 187 KHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHS 246
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
+A +LF+++ KE G P ++ + C G+ +A+++L MK+
Sbjct: 247 RSKEAVELFEDMISKE------GISPDPVTFNVMINGFCRAGEVERAKKIL-DFMKKNGC 299
Query: 121 DP--LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME 178
+P +Y ++ G C+ G + + + + D Y L++ F + + AM+
Sbjct: 300 NPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMK 359
Query: 179 TLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
L +M S T T++ IL L +G E+ + MLD+ + ++L+ S ++
Sbjct: 360 LLGEMKASRCRADTLTYNVILRGLSSEGRSEEA----LQMLDQWGSEGVHLNKGSYRIIL 415
Query: 239 G----HGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHN 291
+G +KA + + ++ ++G E+V LC+ G ++L+ L+
Sbjct: 416 NALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLI 475
Query: 292 VDIDLCNAVILGLCEINRVLEAFGLCYELV 321
AV+ +C+ +++ F L LV
Sbjct: 476 PGPKSWGAVVESICKERKLVHVFELLDSLV 505
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 116/253 (45%), Gaps = 15/253 (5%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P TF + + SAG D+A+K+F NM D AS++ ++ LC+ +KA +L
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 69 FDEL---FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS- 124
F L F + V +Y I C +T KA VL+++++RG L+
Sbjct: 184 FRALRGRFSVDTV-----------TYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTT 232
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T++ G R G + +E + M +RD DV Y ++ GF + A ++M+
Sbjct: 233 YNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMI 292
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ LP +T+++++ L +K + + M+ R N+ I LF G
Sbjct: 293 REGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFS 352
Query: 245 KAFEIVELLYKKG 257
+ E+++ + +G
Sbjct: 353 RGEELMQRMENEG 365
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P+ T+NT++ AG + A + F MK D +Y+ ++ G+ +A
Sbjct: 225 GINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRA 284
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+FDE+ + G P A+Y + Q LC+ A + ++++RG + + +
Sbjct: 285 RNVFDEMIRE-------GVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTT 337
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G G + G EL+ M P+ + Y+ +I + + + A+ EKM
Sbjct: 338 YNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMG 397
Query: 185 KSSYLPKTSTWHSILARLL 203
LP T++ +++ +
Sbjct: 398 SGDCLPNLDTYNILISGMF 416
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 89/196 (45%), Gaps = 8/196 (4%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G FS DT T+N +++ C +AL+V + M + + +Y+ +++ + G
Sbjct: 189 GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRH 248
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL- 123
A + F E+ +++ C+ +Y + G+ ++A V ++++ G +
Sbjct: 249 AWEFFLEMKKRD---CEID----VVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVA 301
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y +I C++ EN + M+RR + P+V Y+ LI G + E +++M
Sbjct: 302 TYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM 361
Query: 184 LKSSYLPKTSTWHSIL 199
P T++ ++
Sbjct: 362 ENEGCEPNFQTYNMMI 377
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 24/222 (10%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
DT +N +IH C AG DEA +F N+ + D +Y+++IR +AEKL+
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----FSSLGRAEKLY 68
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVI 129
E+ + +V P +Y + LC+ K +A +V ++ ++ T+I
Sbjct: 69 AEMIRRGLV-------PDTITYNSMIHGLCKQNKLAQARKV--------SKSCSTFNTLI 113
Query: 130 MGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
G+C+ ++G L M RR + +V Y LI GF Q A++ ++M+ +
Sbjct: 114 NGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVY 173
Query: 190 PKTSTWHSILARLLEKGFPHESARVTVMMLDRN--IRQNINL 229
+ T+ IL +L + E + M+L ++ + N+ L
Sbjct: 174 SSSITFRDILPQLCSR---KELRKAVAMLLQKSSMVSNNVTL 212
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
S TFNTLI+ +C A + + + +F M + A+ +Y+ LI Q GD++ A
Sbjct: 103 SKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALD 162
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ 113
+F E+ G + +++ I LC + RKA +L Q
Sbjct: 163 IFQEMVSN-------GVYSSSITFRDILPQLCSRKELRKAVAMLLQ 201
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 128/281 (45%), Gaps = 11/281 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ P+ +NT+I S C G ++ AL V ++MK + D +Y+ LI L G + +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
++ ++ + G P ++ + + G+ +A++ ++++R + ++
Sbjct: 239 ARILSDMM-------RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVT 291
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I G C G + ++L ++ + F P+ Y+ LI+G+ + + M+ L M
Sbjct: 292 YNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMS 351
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ T T++++ + G + +V M+ + ++ ++ L HG
Sbjct: 352 RDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIG 411
Query: 245 KAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLL 282
KA +E L K V I +++ LCK K+ +A L
Sbjct: 412 KALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLF 452
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 8/181 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P+ T+NTLI+ +C A +D+ +K+ M V D+ +Y+ L + CQ G + A
Sbjct: 319 GFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAA 378
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
EK+ + V C G P ++ + LC+HGK KA L + K T ++
Sbjct: 379 EKVLGRM-----VSC--GVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIIT 431
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C+ E+ + L + + PDV Y ++ G +K A E KM
Sbjct: 432 YNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQ 491
Query: 185 K 185
K
Sbjct: 492 K 492
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 150/360 (41%), Gaps = 17/360 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P F+ L+ + + + +F +++ ++ D S++ LI C+ A
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
++ K G +P ++ + C + +A ++ QI+ G + + + Y T
Sbjct: 137 LGKMM-------KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNT 189
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I C +G ++L M + PDV Y+ LI ++ L M++
Sbjct: 190 IIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMG 249
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T+ +++ ++G E+ + M+ R++ NI I L HG D+A
Sbjct: 250 ISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAK 309
Query: 248 EIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
+++ +L KGF V ++ CK ++ + K+L ++ + D N + G
Sbjct: 310 KVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGY 369
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRS 364
C+ + A + +V G+H ++ N L+ L GK I K + LE+L +S
Sbjct: 370 CQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGK------IGKALVRLEDLQKS 423
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 148/351 (42%), Gaps = 19/351 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P TF +L++ C EA+ + + + + Y+ +I +LC++G + A
Sbjct: 144 GFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTA 203
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+ + K G +P +Y + L G + R+L +M+ G + D ++
Sbjct: 204 LDVLKHMK-------KMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ +I + +EG + M++R P++ Y+ LI+G A + L ++
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF-GHGHR 243
+ P T+++++ + + ++ +M R ++ T + L+ G+
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVM----SRDGVDGDTFTYNTLYQGYCQA 372
Query: 244 DKAFEIVELLYKKGFCVKIEEVVQF------LCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
K ++L + C ++ F LC GK+ +A L K+ V I
Sbjct: 373 GKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITY 432
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
N +I GLC+ ++V +A+ L L KG+ ++ ++ L + EA
Sbjct: 433 NIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREA 483
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 160/360 (44%), Gaps = 32/360 (8%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG--DY 62
GG+ F+ LI ++ +G +EA+ VF +MK + + + +Y+ +I + C +G ++
Sbjct: 262 GGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVI-DACGKGGMEF 320
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM--KRGTQ 120
+ K FDE + + G QP ++ + +C G +A R L M +R Q
Sbjct: 321 KQVAKFFDE-------MQRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFDEMTNRRIEQ 372
Query: 121 DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
D SY T++ C+ G + +E+L M + +P+V Y +IDGF + + A+
Sbjct: 373 DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 432
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
+M +++++L+ + G E+ + M I++++ LL G+
Sbjct: 433 GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDV---VTYNALLGGY 489
Query: 241 GHRDKAFEIVELLYKKGFC-VKIEEVVQFL----------CKRGKLPEARKLLLFSLKNH 289
G + K E+ KK F +K E V+ L K G EA ++
Sbjct: 490 GKQGKYDEV-----KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG 544
Query: 290 HNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
D+ L +A+I LC+ V A L E+ ++G+ + N ++ A ++ +A
Sbjct: 545 LRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSA 604
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 148/337 (43%), Gaps = 21/337 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALK-VFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G PD TFN+L+ + CS G L EA + +F+ M N ++ D SY+ L+ +C+ G D
Sbjct: 334 GVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDL 392
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPL 123
A ++ ++ K I+ P SY + + G+ +A + ++ G D +
Sbjct: 393 AFEILAQMPVKRIM-------PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
SY T++ + + G E ++L M DV Y+ L+ G+ ++ K + +M
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ LP T+ +++ + G E+ + +R ++ L + I+ L +G
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 244 DKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
A +++ + K+G + + G+ + +S N ++ L
Sbjct: 566 GSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYS--NGGSLPFSSSALSALT 623
Query: 304 LCEINRVLEAFG-LCYEL-------VEKGLHQELTCL 332
E NRV++ FG L E E+G+ QEL+C+
Sbjct: 624 ETEGNRVIQLFGQLTTESNNRTTKDCEEGM-QELSCI 659
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 155/375 (41%), Gaps = 71/375 (18%)
Query: 15 NTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFE 74
+ ++ C G +DEAL +F MK ++ D +YSI+I LC+ G +D A L+DE+ +
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 75 KEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHC 133
K I+ P + ++ + LC+ G +A +L ++ G T D + Y VI G+
Sbjct: 427 KRIL-------PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA 479
Query: 134 REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGF-----LQKDKPLL------------- 175
+ G E EL ++ P V ++ LI G+ + + + +L
Sbjct: 480 KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVV 539
Query: 176 ----------------AMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMML 219
+++ L + +K+ +P T+ +S++ + L +G+ HE+
Sbjct: 540 SYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC------- 592
Query: 220 DRNIRQNINLSTKSIELLFGHGHRDKAFEIV---ELLYKKGFCVKIEEVVQFLCKRGKLP 276
+ +R+ I K G RD E + ++ Y ++Q+LC+ L
Sbjct: 593 NHVLRERIFEKCK-------QGLRDMESEGIPPDQITYNT--------IIQYLCRVKHLS 637
Query: 277 EARKLLLFSLKNHHNVDIDLC--NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLND 334
A + + N+D N +I LC + +A Y L E+ +
Sbjct: 638 GA--FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTT 695
Query: 335 LVTALEARGKVEEAA 349
L+ A +G E A
Sbjct: 696 LIKAHCVKGDPEMAV 710
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 121/284 (42%), Gaps = 16/284 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P + N LI+ C G++ EAL++ +M V DS +Y+IL + G A
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGA 311
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ----D 121
++ ++ +K G P +Y + C+ G +L+ ++ RG +
Sbjct: 312 WEVIRDMLDK-------GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
P S M + G C+ G + L M PD+ Y +I G + K +A+ +
Sbjct: 365 PCSVM--LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 422
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
+M LP + T ++L L +KG E+ + ++ +I L I+ G
Sbjct: 423 EMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSG 482
Query: 242 HRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLL 282
++A E+ +++ + G + ++ CK + EARK+L
Sbjct: 483 CIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 146/364 (40%), Gaps = 42/364 (11%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P +FN+++ +C G +D A F + + S++ILI LC G +A +L
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMT 127
+ + K G +P + +Y + + G A V+R ++ +G + D ++Y
Sbjct: 280 ASD-------MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTI 332
Query: 128 VIMGHCREGAYENGYELLIWMLRRDF-LPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
++ G C+ G + G LL ML R F L + ++ G + + A+ +M
Sbjct: 333 LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 392
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P + ++ L + G + + M D+ I N S LL G
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN---SRTHGALLLG------- 442
Query: 247 FEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCE 306
LC++G L EAR LL + + +DI L N VI G +
Sbjct: 443 ----------------------LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480
Query: 307 INRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVL 366
+ EA L ++E G+ + N L+ + EA I I L L SV+
Sbjct: 481 SGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK-LYGLAPSVV 539
Query: 367 SYSS 370
SY++
Sbjct: 540 SYTT 543
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+NT+I C +L A E MK+ + A SA+Y+ILI +LC G KA
Sbjct: 615 GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKA 674
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
+ L E+ + L KF +Y + + C G A ++ Q++ RG +
Sbjct: 675 DSFIYSLQEQNVSLSKF-------AYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRD 727
Query: 125 YMTVIMGHCR 134
Y VI CR
Sbjct: 728 YSAVINRLCR 737
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 127/348 (36%), Gaps = 61/348 (17%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
T++T++ C L++A+ + + S++ ++ C+ G D A+ F
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF--- 245
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMG 131
+ K G P S+ + LC G +A + + K G + D ++Y + G
Sbjct: 246 ----CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKG 301
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
G +E++ ML + PDV Y L+ G Q + + L+ ML
Sbjct: 302 FHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDML------- 354
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVE 251
+GF S +ML L G D+A +
Sbjct: 355 ------------SRGFELNSIIPCSVMLSG---------------LCKTGRIDEALSLFN 387
Query: 252 LLYKKGFC---VKIEEVVQFLCKRGKLPEA--------RKLLLFSLKNHHNVDIDLCNAV 300
+ G V V+ LCK GK A K +L + + H A+
Sbjct: 388 QMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTH--------GAL 439
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+LGLC+ +LEA L L+ G ++ N ++ G +EEA
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 152/368 (41%), Gaps = 71/368 (19%)
Query: 22 CSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCK 81
C G +DEAL +F MK ++ D +YSI+I LC+ G +D A L+DE+ +K I+
Sbjct: 374 CKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL--- 430
Query: 82 FGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYEN 140
P + ++ + LC+ G +A +L ++ G T D + Y VI G+ + G E
Sbjct: 431 ----PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 141 GYELLIWMLRRDFLPDVEIYDCLIDGF-----LQKDKPLL-------------------- 175
EL ++ P V ++ LI G+ + + + +L
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 176 ---------AMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN 226
+++ L + +K+ +P T+ +S++ + L +G+ HE+ + +R+
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC-------NHVLRER 599
Query: 227 INLSTKSIELLFGHGHRDKAFEIV---ELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLL 283
I K G RD E + ++ Y ++Q+LC+ L A +
Sbjct: 600 IFEKCK-------QGLRDMESEGIPPDQITYNT--------IIQYLCRVKHLSGA--FVF 642
Query: 284 FSLKNHHNVDIDLC--NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEA 341
+ N+D N +I LC + +A Y L E+ + L+ A
Sbjct: 643 LEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCV 702
Query: 342 RGKVEEAA 349
+G E A
Sbjct: 703 KGDPEMAV 710
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 121/284 (42%), Gaps = 16/284 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P + N LI+ C G++ EAL++ +M V DS +Y+IL + G A
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGA 311
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ----D 121
++ ++ +K G P +Y + C+ G +L+ ++ RG +
Sbjct: 312 WEVIRDMLDK-------GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
P S M + G C+ G + L M PD+ Y +I G + K +A+ +
Sbjct: 365 PCSVM--LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 422
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
+M LP + T ++L L +KG E+ + ++ +I L I+ G
Sbjct: 423 EMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSG 482
Query: 242 HRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLL 282
++A E+ +++ + G + ++ CK + EARK+L
Sbjct: 483 CIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 146/364 (40%), Gaps = 42/364 (11%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P +FN+++ +C G +D A F + + S++ILI LC G +A +L
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMT 127
+ + K G +P + +Y + + G A V+R ++ +G + D ++Y
Sbjct: 280 ASD-------MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTI 332
Query: 128 VIMGHCREGAYENGYELLIWMLRRDF-LPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
++ G C+ G + G LL ML R F L + ++ G + + A+ +M
Sbjct: 333 LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 392
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P + ++ L + G + + M D+ I N S LL G
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN---SRTHGALLLG------- 442
Query: 247 FEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCE 306
LC++G L EAR LL + + +DI L N VI G +
Sbjct: 443 ----------------------LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480
Query: 307 INRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVL 366
+ EA L ++E G+ + N L+ + EA I I L L SV+
Sbjct: 481 SGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK-LYGLAPSVV 539
Query: 367 SYSS 370
SY++
Sbjct: 540 SYTT 543
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+NT+I C +L A E MK+ + A SA+Y+ILI +LC G KA
Sbjct: 615 GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKA 674
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
+ L E+ + L KF +Y + + C G A ++ Q++ RG +
Sbjct: 675 DSFIYSLQEQNVSLSKF-------AYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRD 727
Query: 125 YMTVIMGHCR 134
Y VI CR
Sbjct: 728 YSAVINRLCR 737
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 127/348 (36%), Gaps = 61/348 (17%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
T++T++ C L++A+ + + S++ ++ C+ G D A+ F
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF--- 245
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMG 131
+ K G P S+ + LC G +A + + K G + D ++Y + G
Sbjct: 246 ----CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKG 301
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
G +E++ ML + PDV Y L+ G Q + + L+ ML
Sbjct: 302 FHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDML------- 354
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVE 251
+GF S +ML L G D+A +
Sbjct: 355 ------------SRGFELNSIIPCSVMLSG---------------LCKTGRIDEALSLFN 387
Query: 252 LLYKKGFC---VKIEEVVQFLCKRGKLPEA--------RKLLLFSLKNHHNVDIDLCNAV 300
+ G V V+ LCK GK A K +L + + H A+
Sbjct: 388 QMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTH--------GAL 439
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+LGLC+ +LEA L L+ G ++ N ++ G +EEA
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 156/383 (40%), Gaps = 41/383 (10%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TF TLI +C L+ A KVF+ M+ + +S + S+LI + D +
Sbjct: 192 GHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETG 251
Query: 66 EKLFDELFE---------------KEIV--LCKFG----------------SQPLAASYK 92
KL EL+E +V +C+ G S + +Y
Sbjct: 252 RKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYG 311
Query: 93 PIFQYLCEHGKTRKAERVLRQIMKRGTQDP--LSYMTVIMGHCREGAYENGYELLIWMLR 150
+ LC + + A R++ IMK P SY +I G C++G Y+LL
Sbjct: 312 HMIDSLCRYRRNHGAARIV-YIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSE 370
Query: 151 RDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHE 210
+F P Y L++ ++ A LE ML+ +T ++ L L P E
Sbjct: 371 FEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTE 430
Query: 211 SARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFC----VKIEEVV 266
V V ML + R + I L G D A ++++ + FC V + V+
Sbjct: 431 ILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVM 490
Query: 267 QFLCKRGKLPEARKLLLFSL-KNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGL 325
L +G+ EA +L + +N + NAVI GL ++++ EA + +L + +
Sbjct: 491 CGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASV 550
Query: 326 HQELTCLNDLVTALEARGKVEEA 348
+ T ++ L KV+ A
Sbjct: 551 TADSTTYAIIIDGLCVTNKVDMA 573
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 138/342 (40%), Gaps = 13/342 (3%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
+ +I S C A ++ MK+ + SY+ +I LC+ G +A +L +E
Sbjct: 309 AYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEG 368
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKR-GTQDPLSYMTVIMG 131
E E P +YK + + LC+ T KA VL ++++ G Y + G
Sbjct: 369 SEFEFF-------PSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRG 421
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY-LP 190
C +L+ ML+ D PD + +I+G + + AM+ L+ M+ + P
Sbjct: 422 LCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAP 481
Query: 191 KTSTWHSILARLLEKGFPHESARV-TVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEI 249
T ++++ LL +G E+ V +M + I+ + I LF D+A +
Sbjct: 482 DAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSV 541
Query: 250 VELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCE 306
L K ++ LC K+ A+K + D + A + GLC+
Sbjct: 542 FGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQ 601
Query: 307 INRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+ +A Y+L + G + C N ++ G EA
Sbjct: 602 SGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREA 643
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 16/211 (7%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFEN-MKNFQVTADSASYSILIRNLCQRGDYDKAE 66
+PD T NT++ + G +EAL V M ++ +Y+ +IR L + D+A
Sbjct: 480 APDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAM 539
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM-KRGTQDPLSY 125
+F +L EK V + +Y I LC K A++ ++ G D Y
Sbjct: 540 SVFGQL-EKASVTAD------STTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVY 592
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+ G C+ G + L + +P+V Y+ +I + A + LE+M K
Sbjct: 593 AAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRK 652
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTV 216
+ P TW R+L+K H+S +TV
Sbjct: 653 NGQAPDAVTW-----RILDK--LHDSMDLTV 676
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 94/215 (43%), Gaps = 14/215 (6%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTA-DSASYSILIRNLCQRGDYD 63
G PD T NT+I+ C G +D+A+KV ++M + A D+ + + ++ L +G
Sbjct: 441 GDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQG--- 497
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
+AE+ D L V+ + +P +Y + + L + K +A V Q+ K T D
Sbjct: 498 RAEEALDVLNR---VMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADS 554
Query: 123 LSYMTVIMGHCREGAYENG---YELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
+Y +I G C + ++ +IW R D +Y + G Q A
Sbjct: 555 TTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRH---DAFVYAAFLKGLCQSGYLSDACHF 611
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARV 214
L + S +P +++++A G E+ ++
Sbjct: 612 LYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQI 646
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 168/393 (42%), Gaps = 55/393 (13%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
F P +N L++ C+ + +A K+ +M+N D +++ LI C+ + + A
Sbjct: 158 FVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAH 217
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPI---FQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
K+FDE+ +C G +P + + + F + + RK + L + MK T +
Sbjct: 218 KVFDEM-----RVC--GIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSM 270
Query: 124 ---SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
++ ++ CREG + + +E+ M + + Y +ID + + A +
Sbjct: 271 KAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIV 330
Query: 181 EKMLKSSYLPKTSTWHSIL------------ARLLEKG-----FPHESARVTVM-----M 218
M P+ +++++I+ +LLE+G FP E +M
Sbjct: 331 YIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKE 390
Query: 219 LDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEA 278
LD +N+ +EL+ D+ + +Y +G CV ++ + L
Sbjct: 391 LDTGKARNV------LELMLRKEGADRTR--IYNIYLRGLCV-MDNPTEIL--------- 432
Query: 279 RKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVE-KGLHQELTCLNDLVT 337
+L+ L+ D N VI GLC++ RV +A + +++ K + LN ++
Sbjct: 433 -NVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMC 491
Query: 338 ALEARGKVEEAAFISKRIPGLENLDRSVLSYSS 370
L A+G+ EEA + R+ + V++Y++
Sbjct: 492 GLLAQGRAEEALDVLNRVMPENKIKPGVVAYNA 524
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/403 (20%), Positives = 155/403 (38%), Gaps = 81/403 (20%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PD+ +++IHS C AG DEA + F D + +++I L
Sbjct: 85 GYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVST 144
Query: 66 EKLFDEL--FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
+ L F+KE V P +Y + LC + A +++ + RG D
Sbjct: 145 LGVIHRLIGFKKEFV-------PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDV 197
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+++ T+I G+C E +++ M P+ LI GFL+ + +ET K
Sbjct: 198 VTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLK----MRDVETGRK 253
Query: 183 MLKS--SYLP-------KTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKS 233
++K Y+ K + + +++ + +G+ ++ + +N++L +S
Sbjct: 254 LMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIA---------ENMSL-CES 303
Query: 234 IELLFGHGH-----------------------------RDKAFEIVELLYKKGFCVK--- 261
+ + F +GH R I+ L K G C++
Sbjct: 304 VNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQ 363
Query: 262 -IEEVVQF---------------LCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLC 305
+EE +F LCK +AR +L L+ + N + GLC
Sbjct: 364 LLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLC 423
Query: 306 EINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
++ E + +++ + LN ++ L G+V++A
Sbjct: 424 VMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDA 466
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/376 (19%), Positives = 154/376 (40%), Gaps = 32/376 (8%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PDT T+N +I + C G++ AL + E+M D +Y+ +IR + G+ ++A
Sbjct: 169 GGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQA 228
Query: 66 EKLFDELFEKEI------------VLCKF----------------GSQPLAASYKPIFQY 97
+ + + + ++C++ G P +Y + Y
Sbjct: 229 IRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNY 288
Query: 98 LCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
C G + V++ I+ G + + ++Y T++ C ++ E+L M + + P
Sbjct: 289 NCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPT 348
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
V Y+ LI+G + A++ +ML+ LP T++++L + ++G ++ +
Sbjct: 349 VITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLG 408
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRG 273
++ + + I+ L G KA E+ + G + ++ C+
Sbjct: 409 LLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRAN 468
Query: 274 KLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLN 333
+ EA ++L + + + VI GLC+ + A + ++ G + T
Sbjct: 469 LVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYT 528
Query: 334 DLVTALEARGKVEEAA 349
+V +E G EA
Sbjct: 529 AIVKGVEEMGMGSEAV 544
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 135/350 (38%), Gaps = 41/350 (11%)
Query: 1 MKGDGGFSP-DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQR 59
+ DG + D T N ++H+ CS G L +A K+ E M S S L+R L +
Sbjct: 93 LSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARI 152
Query: 60 GDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT 119
DKA + V+ G P +Y I LC+ G R A +L + G+
Sbjct: 153 DQLDKAMCILR-------VMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGS 205
Query: 120 -QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME 178
D ++Y TVI G E L+ P + Y L++ + A+E
Sbjct: 206 PPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIE 265
Query: 179 TLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
LE M P T++S++ +G E A V +L + N + L
Sbjct: 266 VLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLC 325
Query: 239 GHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
H + D+ EI+ ++Y+ +C V+ + N
Sbjct: 326 SHEYWDEVEEILNIMYQTSYC---PTVITY-----------------------------N 353
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+I GLC+ + A Y+++E+ ++ N ++ A+ G V++A
Sbjct: 354 ILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDA 403
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 108/216 (50%), Gaps = 8/216 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P T+N+LI C ++ +A + E+M ++ ++ ++ +L++ LC +G+Y++A+KL
Sbjct: 219 PSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKL 278
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTV 128
+F+ E CK P +Y + L + G+ +A+ +L ++ KR + + +
Sbjct: 279 ---MFDMEYRGCK----PGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNI 331
Query: 129 IMGH-CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ H C E Y +L M + P+ Y +IDGF + + + L ML S
Sbjct: 332 LVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASR 391
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI 223
+ P +T+ ++A L++ G + V +M +N+
Sbjct: 392 HCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNL 427
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
+ NTLI+ G L++A F+ K+ ++ +S S++ILI+ + D++ A K+FDE+
Sbjct: 153 SLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEM 212
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMKRGTQDPLSYMTVIMG 131
E E+ QP +Y + +LC + KA+ +L I KR + +++ ++ G
Sbjct: 213 LEMEV-------QPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKG 265
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
C +G Y +L+ M R P + Y L+ ++ + A L +M K P
Sbjct: 266 LCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPD 325
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN 226
++ ++ L + E+ RV M + + N
Sbjct: 326 VVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPN 360
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 8/195 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ TF L+ C G +EA K+ +M+ +Y IL+ +L +RG D+A+ L
Sbjct: 254 PNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLL 313
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
E+ ++ I +P Y + +LC + +A RVL ++ +G + + +Y
Sbjct: 314 LGEMKKRRI-------KPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRM 366
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G CR +++G +L ML P + C++ G ++ A LE M K +
Sbjct: 367 MIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKN 426
Query: 188 YLPKTSTWHSILARL 202
+ W ++L+ L
Sbjct: 427 LSFGSGAWQNLLSDL 441
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 129/304 (42%), Gaps = 17/304 (5%)
Query: 28 DEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPL 87
+EAL +F + D SYS LI L + ++D +++ L V C+
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQIL-RLVRYRNVRCR------ 115
Query: 88 AASYKPIFQYLCEHGKTRKAERVLRQIMK----RGTQDPLSYMTVIMGHCREGAYENGYE 143
+ + + Q+ + G KA V +I R Q + + V++ + G E
Sbjct: 116 ESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDN---GELEKAKS 172
Query: 144 LLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLL 203
P+ ++ LI GFL K A + ++ML+ P T++S++ L
Sbjct: 173 FFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLC 232
Query: 204 EKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIV-ELLYK--KGFCV 260
++ + M+ + IR N ++ L G ++A +++ ++ Y+ K V
Sbjct: 233 RNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLV 292
Query: 261 KIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYEL 320
++ L KRG++ EA+ LL K D+ + N ++ LC RV EA+ + E+
Sbjct: 293 NYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEM 352
Query: 321 VEKG 324
KG
Sbjct: 353 QMKG 356
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 152/393 (38%), Gaps = 62/393 (15%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P T++ LI C L++A + M + V+ D+ +YS+LI L + + D A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 66 EKLFDELFEKEI------------VLCKFGSQ----------------PLAASYKPIFQY 97
+ L E+ I V+ K G P A +Y + +
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 98 LCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
C R+ +L ++ KR P +Y TV+ G C G + Y ++ M+ P+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
V IY LI FLQ + AM L++M + P ++S++ L + E+ V
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLP 276
M++ ++ N F +G F E +F +
Sbjct: 512 EMVENGLKPNA----------FTYG---------------AFISGYIEASEFASADKYVK 546
Query: 277 EARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLV 336
E R+ + K LC +I C+ +V+EA +V++G+ + L+
Sbjct: 547 EMRECGVLPNKV-------LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 337 TALEARGKVEEAAFISKRIPGLENLDRSVLSYS 369
L KV++A I + + G + + V SY
Sbjct: 600 NGLFKNDKVDDAEEIFREMRG-KGIAPDVFSYG 631
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 145/347 (41%), Gaps = 39/347 (11%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G D T+ L++ +D+A ++F M+ + D SY +LI + G+
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQ 644
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
KA +FDE+ E+ G P Y + C G+ KA+ +L ++ +G +
Sbjct: 645 KASSIFDEMVEE-------GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
++Y T+I G+C+ G + L M + +PD +Y L+DG + + A+ T+
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI-TIFG 756
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
K T+ +++++ + + G V ++D + + FG +
Sbjct: 757 TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR------------FGKPN 804
Query: 243 RDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
D + I ++ +LCK G L EA K L ++N + + + +L
Sbjct: 805 -DVTYNI---------------MIDYLCKEGNL-EAAKELFHQMQNANLMPTVITYTSLL 847
Query: 303 -GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
G ++ R E F + E + G+ + + ++ A G +A
Sbjct: 848 NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 112/256 (43%), Gaps = 14/256 (5%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M+G G +PD ++ LI+ GN+ +A +F+ M +T + Y++L+ C+ G
Sbjct: 618 MRGKG-IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-T 119
+ +KA++L DE+ K G P A +Y I C+ G +A R+ ++ +G
Sbjct: 677 EIEKAKELLDEMSVK-------GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
D Y T++ G CR E + ++ ++ LI+ + K L E
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEV 788
Query: 180 LEKMLKSSY----LPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIE 235
L +++ S+ P T++ ++ L ++G + + M + N+ + T +
Sbjct: 789 LNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Query: 236 LLFGHGHRDKAFEIVE 251
G R + F + +
Sbjct: 849 GYDKMGRRAEMFPVFD 864
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 137/345 (39%), Gaps = 12/345 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ + TLI + +A++V + MK + D Y+ LI L + D+A
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
E+ E G +P A +Y E + A++ ++++ + G + +
Sbjct: 507 RSFLVEMVEN-------GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+I +C++G M+ + L D + Y L++G + DK A E +M
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
P ++ ++ + G +++ + M++ + N+ + + G +
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
KA E+++ + KG V ++ CK G L EA +L D + ++
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVE 346
G C +N V A + + +KG N L+ + GK E
Sbjct: 740 DGCCRLNDVERAITI-FGTNKKGCASSTAPFNALINWVFKFGKTE 783
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 137/324 (42%), Gaps = 52/324 (16%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ FN L+ + C + N+ +A +VFENM++ + T DS +YSIL+ + + KA ++
Sbjct: 201 PNLVAFNGLLSALCKSKNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGKEPNLPKAREV 259
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTV 128
F E+ + G P +Y + LC+ G+ +A ++R M P +++
Sbjct: 260 FREMIDA-------GCHPDIVTYSIMVDILCKAGRVDEALGIVRS-MDPSICKPTTFIYS 311
Query: 129 IMGHC--REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
++ H E E + + M R DV +++ LI F + ++ L++M
Sbjct: 312 VLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSK 371
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P + + + IL L+E+ G +D+A
Sbjct: 372 GVTPNSKSCNIILRHLIER-----------------------------------GEKDEA 396
Query: 247 FEIVELLYKKGFCVKIEE----VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
F++ + K C + V++ C++ ++ A K+ + K + + +I
Sbjct: 397 FDVFRKMIK--VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLIN 454
Query: 303 GLCEINRVLEAFGLCYELVEKGLH 326
GLCE +A L E++E G+
Sbjct: 455 GLCEERTTQKACVLLEEMIEMGIR 478
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 9/152 (5%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G D FN+LI + C A + +V + MK+ VT +S S +I++R+L +RG+ D+
Sbjct: 336 SGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDE 395
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL- 123
A FD +F K I +C +P A +Y + + CE + A++V + + K+G +
Sbjct: 396 A---FD-VFRKMIKVC----EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMH 447
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLP 155
++ +I G C E + LL M+ P
Sbjct: 448 TFSVLINGLCEERTTQKACVLLEEMIEMGIRP 479
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 7/187 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P T ++ L+H++ + L+EA+ F M+ + AD A ++ LI C+ ++
Sbjct: 305 PTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRV 364
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTV 128
E+ K G P + S I ++L E G+ +A V R+++K D +Y V
Sbjct: 365 LKEMKSK-------GVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDADTYTMV 417
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
I C + E ++ +M ++ P + + LI+G ++ A LE+M++
Sbjct: 418 IKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGI 477
Query: 189 LPKTSTW 195
P T+
Sbjct: 478 RPSGVTF 484
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 96/222 (43%), Gaps = 9/222 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T++ ++ C AG +DEAL + +M + YS+L+ G +
Sbjct: 265 DAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTY---GTEN 321
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
+ E+ D E E + G + A + + C+ + + RVL+++ +G
Sbjct: 322 RLEEAVDTFLEME----RSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNS 377
Query: 124 SYMTVIMGHCRE-GAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+I+ H E G + +++ M++ PD + Y +I F +K + A + +
Sbjct: 378 KSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKY 436
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIR 224
M K P T+ ++ L E+ ++ + M++ IR
Sbjct: 437 MRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIR 478
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 136/306 (44%), Gaps = 19/306 (6%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD CT+N LIH +G D+ALK+F+ M +V ++ LI LC+ +A K+
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
K +L +G +P Y + + LC+ G+ A ++ + + + D Y T
Sbjct: 210 ------KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYST 263
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I + G +L M + PD Y+ LI+GF ++ A L++M++
Sbjct: 264 LISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKG 323
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF-----GHGH 242
P +++ IL F + + + R+ + T S ++F G
Sbjct: 324 LKPDVISYNMILGVF----FRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQF 379
Query: 243 RDKAFEIVELLYK--KGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
+ A + E+L+K K ++E +Q LC+ GKL E ++ SL D D+ + +
Sbjct: 380 EEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKL-EILSKVISSLHRGIAGDADVWSVM 438
Query: 301 ILGLCE 306
I +C+
Sbjct: 439 IPTMCK 444
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 81/184 (44%), Gaps = 12/184 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+G D ++TLI S AG +E + E M D+ +Y++LI C D +
Sbjct: 251 EGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSE 310
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A ++ DE+ EK G +P SY I K +A + + +RG + D
Sbjct: 311 SANRVLDEMVEK-------GLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDT 363
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
LSY V G C +E +L ML + + P + ++GFLQK +E L K
Sbjct: 364 LSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRD----RLEGFLQKLCESGKLEILSK 419
Query: 183 MLKS 186
++ S
Sbjct: 420 VISS 423
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 7/147 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD ++N ++ +EA +FE+M + D+ SY I+ LC+ +++A
Sbjct: 323 GLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEA 382
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
+ DE+ K G +P + Q LCE GK +V+ + + D +
Sbjct: 383 AVILDEMLFK-------GYKPRRDRLEGFLQKLCESGKLEILSKVISSLHRGIAGDADVW 435
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRD 152
+I C+E + +LL+ ++ D
Sbjct: 436 SVMIPTMCKEPVISDSIDLLLNTVKED 462
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 149/349 (42%), Gaps = 16/349 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PD + S + A+++FE ++F V + S++ L+R LC+R A
Sbjct: 181 GVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAA 240
Query: 66 EKLFDELFEKEIVLCKFGSQPL-AASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPL 123
+ +F+ K G+ P + SY + + G+ + E+VL+++++ G D L
Sbjct: 241 KSVFN---------AKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCL 291
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
SY +I G R G + E+ + + +PD +Y+ +I F+ +M +M
Sbjct: 292 SYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRM 351
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
L P T+ +++ L++ ++ + ML R + L T ++ L +G
Sbjct: 352 LDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPP 411
Query: 244 DKAFEIVELLYKKGFCVKIEEVVQFLCKR----GKLPEARKLLLFSLKNHHNVDIDLCNA 299
A I + K G C E + L KR GK + ++ + D+++
Sbjct: 412 HAAMVIYQKSRKAG-CRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEY 470
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
++ GLC I + A + E + KG + L + L A K E A
Sbjct: 471 IVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELA 519
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 100/256 (39%), Gaps = 8/256 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G D+C++N +I G ++E KV + M D SYS LI L + G +
Sbjct: 249 GNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRIND 308
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL- 123
+ ++FD + K G+ P A Y + ++ R R+++ + L
Sbjct: 309 SVEIFDNIKHK-------GNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLE 361
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y ++ G + + E+ ML R LP + + P AM +K
Sbjct: 362 TYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKS 421
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
K+ S + +L RL G V M + ++ + ++ L GH
Sbjct: 422 RKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHL 481
Query: 244 DKAFEIVELLYKKGFC 259
+ A ++E +KGFC
Sbjct: 482 ENAVLVMEEAMRKGFC 497
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/236 (18%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ GF PD +++ LI G +++++++F+N+K+ D+ Y+ +I N D+D
Sbjct: 283 ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFD 342
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG----- 118
++ + + + ++E +P +Y + L + K A + +++ RG
Sbjct: 343 ESMRYYRRMLDEEC-------EPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTT 395
Query: 119 -----------TQDPLSYMTVIMGHCREGA---YENGYELL---------------IW-- 147
+ P VI R+ E+ Y+LL +W
Sbjct: 396 GLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDE 455
Query: 148 MLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLL 203
M + DVE+Y+ ++DG A+ +E+ ++ + P + + ++L+
Sbjct: 456 MQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLM 511
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 92/226 (40%), Gaps = 35/226 (15%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD +N +I + SA + DE+++ + M + + + +YS L+ L + A
Sbjct: 320 GNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDA 379
Query: 66 EKLFDELFEKEIV------------LCKFGSQPLA----------------ASYKPIFQY 97
++F+E+ + ++ LC +G A ++YK + +
Sbjct: 380 LEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKR 439
Query: 98 LCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
L GK V ++ + G D Y ++ G C G EN ++ +R+ F P+
Sbjct: 440 LSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPN 499
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY------LPKTSTWH 196
+Y L + +K LA + K+ K+ +++ WH
Sbjct: 500 RFVYSRLSSKLMASNKTELAYKLFLKIKKARATENARSFWRSNGWH 545
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 112/250 (44%), Gaps = 19/250 (7%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKN-FQVTADSASYSILIRNLCQRGDYDKAEK 67
PDT T+N L+ C +L + + M++ F V D S++ILI N+C + +A
Sbjct: 192 PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMY 251
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
L +L G +P Y I + C K +A V +++ + G + D ++Y
Sbjct: 252 LVSKLGNA-------GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYN 304
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
T+I G + G E L M+ + PD Y L++G +K + L A+ LE+M
Sbjct: 305 TLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEAR 364
Query: 187 SYLPKTSTWHSIL-----ARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
P T++++L ARL++KG + MM ++ N + L G
Sbjct: 365 GCAPNDCTYNTLLHGLCKARLMDKGM-----ELYEMMKSSGVKLESNGYATLVRSLVKSG 419
Query: 242 HRDKAFEIVE 251
+A+E+ +
Sbjct: 420 KVAEAYEVFD 429
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 8/197 (4%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G+ GF PD +NT++ C+ EA+ V++ MK V D +Y+ LI L + G
Sbjct: 257 GNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRV 316
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQD 121
++A + + G +P A+Y + +C G++ A +L ++ RG +
Sbjct: 317 EEARMYLKTMVDA-------GYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPN 369
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+Y T++ G C+ + G EL M + Y L+ ++ K A E +
Sbjct: 370 DCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFD 429
Query: 182 KMLKSSYLPKTSTWHSI 198
+ S L S + ++
Sbjct: 430 YAVDSKSLSDASAYSTL 446
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 9/206 (4%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M+ D PD +F LI + C++ NL EA+ + + N D Y+ +++ C
Sbjct: 220 MRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLS 279
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
+A ++ ++ E+ G +P +Y + L + G+ +A L+ ++ G +
Sbjct: 280 KGSEAVGVYKKMKEE-------GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYE 332
Query: 121 -DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
D +Y +++ G CR+G LL M R P+ Y+ L+ G + ME
Sbjct: 333 PDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGME- 391
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEK 205
L +M+KSS + S ++ L R L K
Sbjct: 392 LYEMMKSSGVKLESNGYATLVRSLVK 417
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 141/359 (39%), Gaps = 16/359 (4%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSA--GNLDEALKVFENMKNFQVTADSASYSILIRNLCQ 58
+K F P TF L+ C A ++ +V M N + D + I +R+LC+
Sbjct: 112 LKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCE 171
Query: 59 RGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
G D+A+ L EL EK S P +Y + ++LC+ + ++
Sbjct: 172 TGRVDEAKDLMKELTEKH-------SPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDF 224
Query: 119 TQDP--LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLA 176
P +S+ +I C L+ + F PD +Y+ ++ GF K A
Sbjct: 225 DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEA 284
Query: 177 METLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIEL 236
+ +KM + P T+++++ L + G E+ M+D + T +
Sbjct: 285 VGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNG 344
Query: 237 LFGHGHRDKAFEIVELLYKKGFCVKIE----EVVQFLCKRGKLPEARKLLLFSLKNHHNV 292
+ G A ++E + +G C + ++ LCK + + +L + +
Sbjct: 345 MCRKGESLGALSLLEEMEARG-CAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKL 403
Query: 293 DIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
+ + ++ L + +V EA+ + V+ + + + L T L+ K +E +
Sbjct: 404 ESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTLKWLKKAKEQGLV 462
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 144/340 (42%), Gaps = 46/340 (13%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ +NT+++ + +G++D+AL+ ++ M + D +++ILI C+ +D A L
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTV 128
F E+ EK G +P S+ + + GK + ++ ++++ G + + +
Sbjct: 251 FREMKEK-------GCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEI 303
Query: 129 IM-GHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G CREG ++ L++ +L + LP Y L++ ++K + AME +E++ K
Sbjct: 304 LVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKG 363
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P +A T +E L G +KA
Sbjct: 364 QTP------CFIA-----------------------------CTTLVEGLRKSGRTEKAS 388
Query: 248 EIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
+E + G V +++ LC +A +L L + + D + ++ G
Sbjct: 389 GFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGF 448
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGK 344
+ R E L E+++K + ++ N L+ L GK
Sbjct: 449 TKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGK 488
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 103/226 (45%), Gaps = 14/226 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ +FNTLI S+G ++E +K+ M A+ IL+ LC+ G D A
Sbjct: 258 GCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDA 317
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--L 123
L +L K ++ +F Y + + LC K +A ++ ++ K+G Q P +
Sbjct: 318 CGLVLDLLNKRVLPSEF-------DYGSLVEKLCGENKAVRAMEMMEELWKKG-QTPCFI 369
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+ T++ G + G E + M+ LPD ++ L+ D A ++
Sbjct: 370 ACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRL--RL 427
Query: 184 LKSS--YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNI 227
L SS Y P +T+H +++ ++G E + MLD+++ +I
Sbjct: 428 LASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDI 473
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 9/223 (4%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G PD T+ + I HC +D A KVF+ M + SY+ LI L + D+
Sbjct: 184 AGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDE 243
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPL 123
A L ++ K+ C P +Y + LC G+ +A + +Q+ + G + D
Sbjct: 244 ALSLLVKM--KDDNCC-----PNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDC 296
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
Y +I C + LL ML +P+V Y+ LI GF +K+ AM L KM
Sbjct: 297 MYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVH-KAMGLLSKM 355
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN 226
L+ + +P T+++++A G + R+ +M + + N
Sbjct: 356 LEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 121/264 (45%), Gaps = 9/264 (3%)
Query: 91 YKPIFQYLCEHGKTRKAERVLRQIMKR-GTQDPLSYMTVIMGHCREGAYENGYELLIWML 149
Y + L G + +R+ ++++ + D ++ T++ G+C+ G + + W++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 150 RRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPH 209
+ PD Y I G ++ + A + ++M ++ ++ ++ L E
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 210 ESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE----- 264
E+ + V M D N N+ T I+ L G G + +A + + + + G +K ++
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESG--IKPDDCMYTV 300
Query: 265 VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKG 324
++Q C L EA LL L+N ++ NA+I G C+ N V +A GL +++E+
Sbjct: 301 LIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQN 359
Query: 325 LHQELTCLNDLVTALEARGKVEEA 348
L +L N L+ + G ++ A
Sbjct: 360 LVPDLITYNTLIAGQCSSGNLDSA 383
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D P+ T+ LI + C +G EA+ +F+ M + D Y++LI++ C D
Sbjct: 253 DDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLD 312
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
+A L + + E G P +Y + + C+ KA +L +++++ D
Sbjct: 313 EASGLLEHMLEN-------GLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDL 364
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
++Y T+I G C G ++ Y LL M +P+
Sbjct: 365 ITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PD TF+ +I+ C A + +A F+ M + + + +Y+ILIR+ C GD D++
Sbjct: 490 GFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRS 549
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
KLF ++ E G P +Y Q C+ K +KAE +L+ +++ G + D +
Sbjct: 550 VKLFAKMKEN-------GLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFT 602
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
Y T+I G E+ + R +PD
Sbjct: 603 YSTLIKALSESGRESEAREMFSSIERHGCVPD 634
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 8/192 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G SP+ TFNT + + G++ + V E + D ++S++I LC+ +
Sbjct: 453 DRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIK 512
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A F E+ E +G +P +Y + + C G T ++ ++ ++ + G + D
Sbjct: 513 DAFDCFKEMLE-------WGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDL 565
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y I C+ + ELL MLR PD Y LI + + A E
Sbjct: 566 YAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSS 625
Query: 183 MLKSSYLPKTST 194
+ + +P + T
Sbjct: 626 IERHGCVPDSYT 637
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 146/353 (41%), Gaps = 58/353 (16%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P T +N +I + + +LD A F+ M++ D +Y+ILI +C++G D+A
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDPLS 124
+L ++ E+E G++P +Y + G+ +A + L + +++ + +
Sbjct: 235 IRLVKQM-EQE------GNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEAT 287
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYD----CLIDGFLQKDKPLLAMETL 180
T + G R +E+L+ + +D YD CL + + K+ + L
Sbjct: 288 IRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKE----TGQFL 343
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
K+ + Y+P +ST+++ ++ LL+ E+ R+ + R ++ N
Sbjct: 344 RKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFN------------ 391
Query: 241 GHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC--- 297
G+ V +VQ L + E + L VD L
Sbjct: 392 ----------------GYLV----LVQALLNAQRFSEGDRYL-----KQMGVDGLLSSVY 426
Query: 298 --NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
NAVI LC+ R+ A E+ ++G+ L N ++ RG V++
Sbjct: 427 SYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKV 479
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 87/210 (41%), Gaps = 8/210 (3%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G G ++N +I C A ++ A M++ ++ + +++ + RGD
Sbjct: 417 GVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDV 476
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-D 121
K + ++L G +P ++ I LC + + A +++++ G + +
Sbjct: 477 KKVHGVLEKLLVH-------GFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPN 529
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
++Y +I C G + +L M PD+ Y+ I F + K A E L+
Sbjct: 530 EITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLK 589
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHES 211
ML+ P T+ +++ L E G E+
Sbjct: 590 TMLRIGLKPDNFTYSTLIKALSESGRESEA 619
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/284 (17%), Positives = 118/284 (41%), Gaps = 11/284 (3%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G+ G+ PD+ TFN + +L E ++F+ + V Y +L++ L +
Sbjct: 347 GERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRF 406
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP 122
+ ++ ++ ++ + SY + LC+ + A L ++ RG
Sbjct: 407 SEGDRYLKQMGVDGLLSSVY-------SYNAVIDCLCKARRIENAAMFLTEMQDRGISPN 459
Query: 123 L-SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
L ++ T + G+ G + + +L +L F PDV + +I+ + + A + +
Sbjct: 460 LVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFK 519
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
+ML+ P T++ ++ G S ++ M + + ++ +I+
Sbjct: 520 EMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMR 579
Query: 242 HRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLL 282
KA E+++ + + G +++ L + G+ EAR++
Sbjct: 580 KVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMF 623
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 110/226 (48%), Gaps = 16/226 (7%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P + +FN +++ SA DE K+F + V D+ +ILI+ LC+ G+ +
Sbjct: 160 DFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLE 219
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK-RGTQDP 122
A +L DE +++ S+P ++ P+ + C GK +A ++L ++ K R D
Sbjct: 220 AALQLLDEFPQQK-------SRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDT 272
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+++ +I G ++G E G +LL M + P+ Y ++ G L K + L A E + +
Sbjct: 273 ITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQ 332
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNIN 228
M+ P ++ ++ L E +V+ +D +RQ +N
Sbjct: 333 MISWGMRPSFLSYKKMVLGLCETK--------SVVEMDWVLRQMVN 370
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 101/207 (48%), Gaps = 18/207 (8%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D C N LI C +GNL+ AL++ + + + ++S LIR C +G +++A
Sbjct: 197 GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEA 256
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
KL + + EKE + +P ++ + L + G+ + +L ++ +G + +P +
Sbjct: 257 FKLLERM-EKERI------EPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGT 309
Query: 125 YMTVIMGHCREG----AYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME-T 179
Y V+ G + A E +++ W +R FL Y ++ G L + K ++ M+
Sbjct: 310 YQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLS----YKKMVLG-LCETKSVVEMDWV 364
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKG 206
L +M+ ++PKT W ++ ++ K
Sbjct: 365 LRQMVNHGFVPKTLMWWKVVQCVVSKN 391
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 102/214 (47%), Gaps = 9/214 (4%)
Query: 24 AGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFG 83
AG ++ A+++ M +F S S++ ++ L + KLFDE+ + + K G
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSSKSFNFILNLLV-------SAKLFDEIHKIFVSAPKLG 197
Query: 84 SQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGY 142
+ A + + LCE G A ++L + ++ ++ + +++ +I G C +G +E +
Sbjct: 198 VEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAF 257
Query: 143 ELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARL 202
+LL M + PD ++ LI G +K + ++ LE+M P T+ +L L
Sbjct: 258 KLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGL 317
Query: 203 LEKGFPHESARVTVMMLDRNIRQNINLSTKSIEL 236
L+K E+ + M+ +R + LS K + L
Sbjct: 318 LDKKRNLEAKEMMSQMISWGMRPSF-LSYKKMVL 350
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 171/410 (41%), Gaps = 58/410 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PDT T+N++I G LD+ + FE MK+ D +Y+ LI C+ G
Sbjct: 292 GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIG 351
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+ + E+ G +P SY + C+ G ++A + + + G + +
Sbjct: 352 LEFYREMKGN-------GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 404
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I +C+ G + + L ML+ +V Y LIDG ++ A E KM
Sbjct: 405 YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD 464
Query: 185 KSSYLPKTSTWHSI---------LARLLE-------KGFPH------------------E 210
+ +P ++++++ + R LE +G E
Sbjct: 465 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 524
Query: 211 SARVTVM-MLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYK-------KGFCVKI 262
+A+V + M + I+ N + T ++ F G+ + +++ + + FCV I
Sbjct: 525 AAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLI 584
Query: 263 EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDID--LCNAVILGLCEINRVLEAFGLCYEL 320
+ LCK KL + N + + + A+I GLC+ N+V A L ++
Sbjct: 585 DG----LCKN-KLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQM 639
Query: 321 VEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYSS 370
V+KGL + T L+ +G V EA + ++ + + +L+Y+S
Sbjct: 640 VQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEI-GMKLDLLAYTS 688
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 144/349 (41%), Gaps = 15/349 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P F+ L G L+EA++ F MK F+V + S + L+ + G D ++
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMT 127
F ++ G++P +Y + +C+ G A + ++ RG D ++Y +
Sbjct: 250 FKDMIGA-------GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNS 302
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G + G ++ M PDV Y+ LI+ F + K + +E +M +
Sbjct: 303 MIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNG 362
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P ++ +++ ++G ++ + V M + N T I+ G+ AF
Sbjct: 363 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422
Query: 248 EIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC--NAVIL 302
+ + + G V ++ LC ++ EA + LF + V +L NA+I
Sbjct: 423 RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE--LFGKMDTAGVIPNLASYNALIH 480
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
G + + A L EL +G+ +L + L + K+E A +
Sbjct: 481 GFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 146/350 (41%), Gaps = 14/350 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+ +LI ++C GNL +A ++ M V + +Y+ LI LC +A
Sbjct: 397 GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 456
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
E+LF ++ ++ P ASY + + +A +L ++ RG + D L
Sbjct: 457 EELFGKMDTAGVI-------PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T I G C E ++ M + IY L+D + + P + L++M
Sbjct: 510 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESA-RVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ T+ ++ L + ++ + D ++ N + T I+ L
Sbjct: 570 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQV 629
Query: 244 DKAFEIVELLYKKGFCVKIEEVVQFL---CKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
+ A + E + +KG + K+G + EA L + +D+ ++
Sbjct: 630 EAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSL 689
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLH-QELTCLNDLVTALEARGKVEEAA 349
+ GL N++ +A E++ +G+H E+ C++ L E G ++EA
Sbjct: 690 VWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYEL-GCIDEAV 738
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 132/345 (38%), Gaps = 13/345 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P T + N L+H G D+ + F++M +Y+I+I +C+ GD + A L
Sbjct: 225 PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGL 284
Query: 69 FDELFEKEIVLCKF-GSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
F+E+ KF G P +Y + + G+ ++ + D ++Y
Sbjct: 285 FEEM--------KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYN 336
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+I C+ G G E M P+V Y L+D F ++ A++ M +
Sbjct: 337 ALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV 396
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
+P T+ S++ + G ++ R+ ML + N+ T I+ L +A
Sbjct: 397 GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 456
Query: 247 FEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
E+ + G + ++ K + A +LL D+ L I G
Sbjct: 457 EELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWG 516
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
LC + ++ A + E+ E G+ L+ A G E
Sbjct: 517 LCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 561
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 149/353 (42%), Gaps = 23/353 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T ++L++ C + ++ +A+ V M+ + D +ILI LC+ A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDPLS 124
++ + ++ G P +Y + LC+ G+ AER L ++ K+ + ++
Sbjct: 68 LEVLKRMKDR-------GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ +I + + G + M++ P+V Y LI G ++ A++ L+ M+
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVT--VMMLDRNIRQNINLSTKSIELL----F 238
P T+ + L GF +S+RV + +LD ++ + +T S L F
Sbjct: 181 SKGCTPNVVTYST-----LANGF-FKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYF 234
Query: 239 GHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDID 295
G D A + + G I V+ L G++ +A K +++DI
Sbjct: 235 QAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDII 294
Query: 296 LCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+I G+C+ V EA+ L Y+L K + + ++ L G EA
Sbjct: 295 TYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 347
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 111/274 (40%), Gaps = 4/274 (1%)
Query: 79 LCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGH-CREGA 137
+ K G +P + + C + A V Q+ K G + + T+++ C+
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 138 YENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHS 197
E+L M R P+V Y LI G + + A L +M P T+ +
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 198 ILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKG 257
++ ++G + V MM+ +I N+ + I L H D+A ++++L+ KG
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 258 ---FCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAF 314
V + K ++ + KLL + + CN +I G + ++ A
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 315 GLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
G+ + GL + N ++ L A G+VE+A
Sbjct: 244 GVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKA 277
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 146/339 (43%), Gaps = 19/339 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GFSP T+N+LI ++ G LDEA+++ M D +Y+ L+ + G + A
Sbjct: 344 GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESA 403
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+F+E+ G +P ++ + GK + ++ +I G + D ++
Sbjct: 404 MSIFEEMRNA-------GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVT 456
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ T++ + G + M R F+P+ E ++ LI + + AM +ML
Sbjct: 457 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML 516
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P ST++++LA L G +S +V M D + N L+ S+ + +G
Sbjct: 517 DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPN-ELTYCSLLHAYANG--- 572
Query: 245 KAFEIVELLYKKGFCVKIE------EVVQFLCKRGK-LPEARKLLLFSLKNHHNVDIDLC 297
K ++ L ++ + IE + + +C + LPEA + + + DI
Sbjct: 573 KEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTL 632
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLV 336
N+++ V +A G+ + E+G + N L+
Sbjct: 633 NSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 134/341 (39%), Gaps = 22/341 (6%)
Query: 25 GNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGS 84
G + A +F ++ + D SY+ LI G Y +A +F ++ E G
Sbjct: 187 GRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED-------GC 239
Query: 85 QPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYM-TVIMGHCREGA-YENGY 142
+P +Y I + G L + MK P +Y ++ C+ G+ ++
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAA 299
Query: 143 ELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARL 202
++ M F D Y+ L+D + + +P AM+ L +M+ + + P T++S+++
Sbjct: 300 QVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAY 359
Query: 203 LEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKI 262
G E+ + M ++ + ++ T + G + A I E + G I
Sbjct: 360 ARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNI 419
Query: 263 ---EEVVQFLCKRGKLPEARKLLLFSLKNHHNV-----DIDLCNAVILGLCEINRVLEAF 314
++ RGK E K+ + NV DI N ++ + E
Sbjct: 420 CTFNAFIKMYGNRGKFTEMMKIF-----DEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 315 GLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
G+ E+ G E N L++A G E+A + +R+
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/382 (19%), Positives = 152/382 (39%), Gaps = 79/382 (20%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVF------------------------------- 34
GFS D ++ +LI + ++G EA+ VF
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 35 -----ENMKNFQVTADSASYSILIRNLCQRGD-YDKAEKLFDELFEKEIVLCKFGSQPLA 88
E MK+ + D+ +Y+ LI C+RG + +A ++F+E+ K
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSLHQEAAQVFEEMKAAGFSYDK------- 314
Query: 89 ASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIW 147
+Y + + + ++A +VL +++ G + ++Y ++I + R+G + EL
Sbjct: 315 VTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQ 374
Query: 148 MLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGF 207
M + PDV Y L+ GF + K AM E+M + P T+++ + +G
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRG- 433
Query: 208 PHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQ 267
+ T MM I IN+ S +++ + ++ + + G ++ V +
Sbjct: 434 -----KFTEMM---KIFDEINVCGLSPDIVTWN-------TLLAVFGQNGMDSEVSGVFK 478
Query: 268 FLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQ 327
+ + G +PE N +I +A + +++ G+
Sbjct: 479 EMKRAGFVPERETF----------------NTLISAYSRCGSFEQAMTVYRRMLDAGVTP 522
Query: 328 ELTCLNDLVTALEARGKVEEAA 349
+L+ N ++ AL ARG + E +
Sbjct: 523 DLSTYNTVLAAL-ARGGMWEQS 543
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/352 (19%), Positives = 137/352 (38%), Gaps = 17/352 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G P+ CTFN I + + G E +K+F+ + ++ D +++ L+ Q G
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
+ +F E + + G P ++ + G +A V R+++ G T D
Sbjct: 472 EVSGVFKE-------MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDL 524
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y TV+ R G +E ++L M P+ Y L+ + + L E+
Sbjct: 525 STYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEE 584
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
+ P+ +++ + E+ R + +R +I + + +G
Sbjct: 585 VYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSI---YGR 641
Query: 243 RD---KAFEIVELLYKKGFCVKIEEVVQFL---CKRGKLPEARKLLLFSLKNHHNVDIDL 296
R KA +++ + ++GF + + + ++ ++L L DI
Sbjct: 642 RQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIIS 701
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
N VI C R+ +A + E+ G+ ++ N + + A EEA
Sbjct: 702 YNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEA 753
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 138/315 (43%), Gaps = 15/315 (4%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
GF P+ TFNTLI ++ G+ ++A+ V+ M + VT D ++Y+ ++ L + G +++
Sbjct: 483 AGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQ 542
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS 124
+EK+ E+ E CK P +Y + +GK L + + G +P +
Sbjct: 543 SEKVLAEM---EDGRCK----PNELTYCSLLHAYA-NGKEIGLMHSLAEEVYSGVIEPRA 594
Query: 125 YM--TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+ T+++ + + R F PD+ + ++ + ++ A L+
Sbjct: 595 VLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDY 654
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M + + P +T++S++ +S + +L + I+ +I +S ++ +
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDI-ISYNTVIYAYCRNT 713
Query: 243 RDK-AFEIVELLYKKGFCVKIEEVVQFL---CKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
R + A I + G + F+ EA ++ + +K+ + + N
Sbjct: 714 RMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYN 773
Query: 299 AVILGLCEINRVLEA 313
+++ G C++NR EA
Sbjct: 774 SIVDGYCKLNRKDEA 788
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 104/279 (37%), Gaps = 29/279 (10%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGD-- 61
D G +PD T+NT++ + G +++ KV M++ + + +Y L+ +
Sbjct: 517 DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIG 576
Query: 62 --YDKAEKLFDELFEKEIVLCKF------------------------GSQPLAASYKPIF 95
+ AE+++ + E VL K G P + +
Sbjct: 577 LMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMV 636
Query: 96 QYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
KA VL + +RG T +Y +++ H R + E+L +L +
Sbjct: 637 SIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIK 696
Query: 155 PDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARV 214
PD+ Y+ +I + + + A +M S +P T+++ + E+ V
Sbjct: 697 PDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGV 756
Query: 215 TVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELL 253
M+ R N N ++ +D+A VE L
Sbjct: 757 VRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 104/233 (44%), Gaps = 4/233 (1%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD + LI++ GN+ +A+ E MK + +S Y+ LI+ + G D+AE +
Sbjct: 608 PDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAI 667
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTV 128
+ +L + C P + + E RKAE + + +RG + ++ +
Sbjct: 668 YRKLLQS----CNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMM 723
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
+ + + G +E ++ M L D Y+ ++ F + A+ET ++M+ S
Sbjct: 724 LCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGI 783
Query: 189 LPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
P ST+ S+ L++ G ++ R + + I++ + L ++ L G G
Sbjct: 784 QPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGIG 836
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 157/396 (39%), Gaps = 35/396 (8%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+PDT T+N LI H +++ A F+ MK+ + D SY L+ R ++AE
Sbjct: 364 APDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEG 423
Query: 68 LFDELFEKEIVLCKFGSQPL---------------------------AASYKPIFQYLCE 100
L E+ + + + ++ L + Y E
Sbjct: 424 LIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGE 483
Query: 101 HGKTRKAERVLRQIMKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIY 160
G +AERV + + + Y +I + + E EL M+ PD Y
Sbjct: 484 RGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTY 543
Query: 161 DCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLD 220
+ L+ D P LEKM ++ Y+ + ++++ ++ G + + V M++
Sbjct: 544 NTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVE 603
Query: 221 RNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPE 277
NI ++ + I G+ +A VE + + G V +++ K G L E
Sbjct: 604 YNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDE 663
Query: 278 ARKL---LLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLND 334
A + LL S D+ N +I E + V +A + + ++G E T
Sbjct: 664 AEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFT-FAM 722
Query: 335 LVTALEARGKVEEAAFISKRIPGLENLDRSVLSYSS 370
++ + G+ EEA I+K++ ++ L LSY+S
Sbjct: 723 MLCMYKKNGRFEEATQIAKQMREMKILTDP-LSYNS 757
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 73/169 (43%), Gaps = 11/169 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PD CT+NTL+ SA + E M+ +D Y +I + + G + A
Sbjct: 535 GVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMA 594
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
E+++ E+ E I +P Y + + G ++A + + + G + +
Sbjct: 595 EEVYKEMVEYNI-------EPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVI 647
Query: 125 YMTVIMGHCREGAYENG---YELLIWMLRRDFLPDVEIYDCLIDGFLQK 170
Y ++I + + G + Y L+ + PDV +C+I+ + ++
Sbjct: 648 YNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSER 696
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 108/231 (46%), Gaps = 12/231 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G PD T+ TLI H AG LD A+ +++ M+ ++ D+ +YS++I L + G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
A KLF E+ ++ G P +Y + + + A ++ R + G + D
Sbjct: 487 AAHKLFCEMVDQ-------GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
Query: 123 LSYMTV--IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
++Y V ++GHC G E + M +++++PD +Y L+D + + A +
Sbjct: 540 VTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLST 231
+ ML + P T +S+L+ L E+ + ML +R ++ T
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 107/251 (42%), Gaps = 5/251 (1%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD TFN L C + +A+K+ E M ++ +Y I CQ G D+A L
Sbjct: 266 PDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADL 325
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYMT 127
FD + K + S P A ++ + L ++ K + ++ +++ G D +Y
Sbjct: 326 FDFMITKGSAV----SAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKD 381
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
VI G C + Y+ L M + + PD+ Y+C + + K A++ +M++S
Sbjct: 382 VIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESR 441
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T++ +++ E P + M R+ Q++ I LF +A
Sbjct: 442 CAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEAC 501
Query: 248 EIVELLYKKGF 258
++E + KG
Sbjct: 502 FLLEEVVNKGL 512
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 11/205 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENM--KNFQVTADSA-SYSILIRNLCQRG 60
+ G P+ T+ I + C AG +DEA +F+ M K V+A +A +++++I L +
Sbjct: 296 EAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKN- 354
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-T 119
DKAE+ F EL + I G P ++YK + + +C K +A + L ++ +G
Sbjct: 355 --DKAEECF-ELIGRMI---STGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYP 408
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
D ++Y + C + +L M+ P V+ Y+ LI F + D P A T
Sbjct: 409 PDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNT 468
Query: 180 LEKMLKSSYLPKTSTWHSILARLLE 204
+M K + T+ +++ L +
Sbjct: 469 WTEMDKRDCVQDVETYCAMINGLFD 493
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 84/210 (40%), Gaps = 16/210 (7%)
Query: 2 KGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGD 61
KG +P TF +I + +E ++ M + D ++Y +I +C
Sbjct: 332 KGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEK 391
Query: 62 YDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVL-RQIMKRGTQ 120
D+A K DE+ K G P +Y + LCE+ KT +A ++ R + R
Sbjct: 392 VDEAYKFLDEMSNK-------GYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAP 444
Query: 121 DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQ----KDKPLLA 176
+Y +I + + M +RD + DVE Y +I+G K+ L
Sbjct: 445 SVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLL 504
Query: 177 METLEKMLKSSYLPKTSTWHSILARLLEKG 206
E + K LK Y + S L RL E G
Sbjct: 505 EEVVNKGLKLPY----RVFDSFLMRLSEVG 530
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 150/353 (42%), Gaps = 31/353 (8%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSAS-YSILIRNLCQRGDYDK 64
GF P+ + G ++EA++V+ +K+ +++ + S+L+ L K
Sbjct: 140 GFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCL-------K 192
Query: 65 AEKLFDELFE--KEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP 122
A KL D +E KE+V +F S+ + + + + LC+ G + +L+Q +K+G DP
Sbjct: 193 ARKL-DRFWELHKEMVESEFDSERI----RCLIRALCDGGDVSEGYELLKQGLKQGL-DP 246
Query: 123 LSYM--TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
Y+ +I G C G Y E+L M+ + P + IY +I G K L A
Sbjct: 247 GQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIF 306
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
+ + Y P + +++ EKG+ + ++ M+ + +R N I H
Sbjct: 307 KNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMI-----H 361
Query: 241 GHRDKA-FEIVELLYKK-------GFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNV 292
GH + +VE Y + G + +++ C GK EA ++ +
Sbjct: 362 GHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTP 421
Query: 293 DIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKV 345
+ NA+I G C+ N+V + L EL GL LV L+ V
Sbjct: 422 NAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSV 474
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G++PD + T+I C G L A K++ M + + +Y+++I +RG+
Sbjct: 311 DKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEIS 370
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
E ++E+ +G L+ + + + C HGK+ +A + + + + G T +
Sbjct: 371 LVEAFYNEMLRN-----GYGGTMLSCN--TMIKGFCSHGKSDEAFEIFKNMSETGVTPNA 423
Query: 123 LSYMTVIMGHCREGAYENGYEL 144
++Y +I G C+E E G +L
Sbjct: 424 ITYNALIKGFCKENKVEKGLKL 445
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 8/202 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD ++ +I H N+ +A+ VF M + + S +++ CQ G++ +A
Sbjct: 321 GIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEA 380
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
LF E E I L + Y F L + GK +A + R++ +G D ++
Sbjct: 381 YDLFKEFRETNISLDR-------VCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVIN 433
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G C +G + ++L+I M PD+ IY+ L G A ETL+ M
Sbjct: 434 YTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMME 493
Query: 185 KSSYLPKTSTWHSILARLLEKG 206
P T + ++ L++ G
Sbjct: 494 NRGVKPTYVTHNMVIEGLIDAG 515
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 141/362 (38%), Gaps = 51/362 (14%)
Query: 16 TLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY-DKAEKLFDELFE 74
+++ C+AG LD A FE + + Y L +LC DY KA+ L D ++
Sbjct: 537 SMVKGFCAAGCLDHA---FERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMW- 592
Query: 75 KEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLR-QIMKRGTQDPLSYMTVIMGHC 133
K G +P + Y + C RKA + K+ D +Y +I +C
Sbjct: 593 ------KLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYC 646
Query: 134 REGAYENGYELLIWMLRRDFLPDVEIYDCLI--DGFLQKDKPLLAMETLEKM-------- 183
R + Y L M RRD PDV Y L+ D L + + A + + +
Sbjct: 647 RLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMIN 706
Query: 184 -------LKSSY-----------LPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQ 225
LK Y +P T+ +L E+ E M +++
Sbjct: 707 RYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSRE-------MKAFDVKP 759
Query: 226 NINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLL 282
++ T I+ G +A I + + + G ++ CK G L EA+ +
Sbjct: 760 DVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIF 819
Query: 283 LFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTA-LEA 341
+++ D+ A+I G C VL+A L E++EKG+ L+ + A L+A
Sbjct: 820 DRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYAKLKA 879
Query: 342 RG 343
+G
Sbjct: 880 KG 881
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 141/351 (40%), Gaps = 15/351 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PD N LI ++G D + F ++ + AD+ +Y ++++ L + D ++
Sbjct: 177 GRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEEL 236
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLR-----QIMKRGTQ 120
EKL L E ++ Y + LC + T A +L+ I+ +
Sbjct: 237 EKLLSRLLISE-------TRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSD 289
Query: 121 DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
++Y V+ G C E E+ +++ M + PDV +Y +I+G + A++
Sbjct: 290 LGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVF 349
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
KMLK SIL + G E+ + + NI + + + L
Sbjct: 350 NKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKL 409
Query: 241 GHRDKAFEIVELLYKKGFCVKIEEVVQFL---CKRGKLPEARKLLLFSLKNHHNVDIDLC 297
G ++A E+ + KG + + C +GK +A L++ DI +
Sbjct: 410 GKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIY 469
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
N + GL EAF + +G+ N ++ L G++++A
Sbjct: 470 NVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA 520
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD + LI C G+L EA ++F+ M V D+A Y+ LI C+ G +A+ +
Sbjct: 759 PDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMI 818
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
FD + E G +P Y + C +G KA +++++++++G +
Sbjct: 819 FDRMIES-------GVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIK 863
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G PD + LI C G L EA +F+ M V D Y+ LI C+ G
Sbjct: 789 ESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVL 848
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPI 94
KA KL E+ EK G +P AS +
Sbjct: 849 KAVKLVKEMLEK-------GIKPTKASLSAV 872
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 108/231 (46%), Gaps = 12/231 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G PD T+ TLI H AG LD A+ +++ M+ ++ D+ +YS++I L + G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
A KLF E+ ++ G P +Y + + + A ++ R + G + D
Sbjct: 487 AAHKLFCEMVDQ-------GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
Query: 123 LSYMTV--IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
++Y V ++GHC G E + M +++++PD +Y L+D + + A +
Sbjct: 540 VTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLST 231
+ ML + P T +S+L+ L E+ + ML +R ++ T
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 108/231 (46%), Gaps = 12/231 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G PD T+ TLI H AG LD A+ +++ M+ ++ D+ +YS++I L + G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
A KLF E+ ++ G P +Y + + + A ++ R + G + D
Sbjct: 487 AAHKLFCEMVDQ-------GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
Query: 123 LSYMTV--IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
++Y V ++GHC G E + M +++++PD +Y L+D + + A +
Sbjct: 540 VTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLST 231
+ ML + P T +S+L+ L E+ + ML +R ++ T
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 18/206 (8%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G PD T+ TLI H AG LD A+ +++ M+ ++ D+ +YS++I L + G
Sbjct: 422 EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLP 481
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVL---RQIMKRGTQ 120
A +LF E+ + G P ++ + + H K R E L R + G Q
Sbjct: 482 AAHRLFCEMVGQ-------GCTPNLVTFNIM---IALHAKARNYETALKLYRDMQNAGFQ 531
Query: 121 -DPLSYMTV--IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAM 177
D ++Y V ++GHC G E + M R++++PD +Y L+D + + A
Sbjct: 532 PDKVTYSIVMEVLGHC--GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAW 589
Query: 178 ETLEKMLKSSYLPKTSTWHSILARLL 203
+ + ML++ P T +S+L+ L
Sbjct: 590 QWYQAMLQAGLRPNVPTCNSLLSTFL 615
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 118/325 (36%), Gaps = 75/325 (23%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+T T+N LIHS+ A L EA+ VF M+ D +Y LI + G D A
Sbjct: 389 GCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIA 448
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
++ + E G P +Y I L + G A R+ +++ +G T + ++
Sbjct: 449 MDMYQRMQEA-------GLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVT 501
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ +I H + YE +L M F PD Y + ME L
Sbjct: 502 FNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYS-------------IVMEVLGHC- 547
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
GF E+ V M +N + + ++L G+ D
Sbjct: 548 ---------------------GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVD 586
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
KA++ + + + G R +P CN+++
Sbjct: 587 KAWQWYQAMLQAGL-------------RPNVPT-------------------CNSLLSTF 614
Query: 305 CEINRVLEAFGLCYELVEKGLHQEL 329
++R+ EA+ L ++ GLH L
Sbjct: 615 LRVHRMSEAYNLLQSMLALGLHPSL 639
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 8/180 (4%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D +++TLI + C A N +A ++FE M+ + + +Y+ LI+ + G+ A+KL
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTV 128
D++ E G P Y I +LC+ G KA V +++ T D +SY ++
Sbjct: 384 DQMTE-------LGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSL 436
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
I G CR G +L M ++ PD + +I G ++ K A + ++M+ +
Sbjct: 437 ISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGF 496
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 8/231 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D ++N L+ HC + D+ + D SYS LI C+ + KA
Sbjct: 285 GIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKA 344
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
+LF+E+ +K +V+ +Y + + G + A+++L Q+ + G +
Sbjct: 345 YRLFEEMRQKGMVMN-------VVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIF 397
Query: 126 MTVIMGH-CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
T I+ H C+ G + Y + M+ + PD Y+ LI G + + A++ E M
Sbjct: 398 YTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMK 457
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIE 235
P T+ I+ L+ + +V M+D+ + ++S I+
Sbjct: 458 GKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIK 508
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 137/343 (39%), Gaps = 47/343 (13%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALK-VFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G SPD L+ C A +D A + V E +K+ +V + Y+ LI C+ G +K
Sbjct: 179 GVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEK 238
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ---- 120
AE L + + K G +P +Y + Y ++ ++AE V+ ++++ G Q
Sbjct: 239 AEAL-------KSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAY 291
Query: 121 --------------------------------DPLSYMTVIMGHCREGAYENGYELLIWM 148
D +SY T+I CR Y L M
Sbjct: 292 SYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEM 351
Query: 149 LRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFP 208
++ + +V Y LI FL++ +A + L++M + P + +IL L + G
Sbjct: 352 RQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNV 411
Query: 209 HESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFC---VKIEEV 265
++ V M++ I + I L G +A ++ E + K C + + +
Sbjct: 412 DKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFI 471
Query: 266 VQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEIN 308
+ L + KL A K+ + +D D+ + +I C ++
Sbjct: 472 IGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCSMS 514
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 148/360 (41%), Gaps = 14/360 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PD FN + C + A++ F M D SY+ILI L + G A
Sbjct: 109 GFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDA 168
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK--RGTQDPL 123
++++ + G P + + LC K A ++ + +K R +
Sbjct: 169 VEIWNAMIRS-------GVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTV 221
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
Y +I G C+ G E L +M + PD+ Y+ L++ + + A + +M
Sbjct: 222 VYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEM 281
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVM-MLDRNIRQNINLSTKSIELLFGHGH 242
++S +++ +L R P + V M R ++ ST IE +
Sbjct: 282 VRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTL-IETFCRASN 340
Query: 243 RDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNA 299
KA+ + E + +KG + + +++ + G A+KLL + + D
Sbjct: 341 TRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTT 400
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLE 359
++ LC+ V +A+G+ +++E + + N L++ L G+V EA + + + G E
Sbjct: 401 ILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKE 460
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SPD + T++ C +GN+D+A VF +M ++T D+ SY+ LI LC+ G +A
Sbjct: 390 GLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEA 449
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
KLF+++ KE P ++K I L K A +V Q+M +G T D
Sbjct: 450 IKLFEDMKGKECC-------PDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDV 502
Query: 125 YMTVIMGHCREGA 137
T+I C A
Sbjct: 503 SDTLIKASCSMSA 515
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 121/296 (40%), Gaps = 16/296 (5%)
Query: 48 SYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKA 107
+Y I NL + G D A ++FDE+ + F Y L + A
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSF-------DYNRFIGVLVRESRFELA 63
Query: 108 ERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDG 166
E + + G + P +Y I G C+ ++ LL M F+PD+ ++ +D
Sbjct: 64 EAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDL 123
Query: 167 FLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN 226
+++K A++T M++ P ++ ++ L G ++ + M+ + +
Sbjct: 124 LCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPD 183
Query: 227 INLSTKSIELLFGHGHR-DKAFEIVELLYKKGFCVKIEEVV-----QFLCKRGKLPEARK 280
N + ++ + H + D A+E+V K VK+ VV CK G++ +A
Sbjct: 184 -NKACAALVVGLCHARKVDLAYEMVAEEIKSAR-VKLSTVVYNALISGFCKAGRIEKAEA 241
Query: 281 LLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLV 336
L + K D+ N ++ + N + A G+ E+V G+ + N L+
Sbjct: 242 LKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLL 297
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 148/355 (41%), Gaps = 25/355 (7%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQ------VTADSASYSILIRNLCQRGDY 62
PD T LI++ C + +DEAL+VFE M+ + + ADS ++ LI LC+ G
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP 122
+AE+L + +E + P A +Y + C GK A+ V+ + MK P
Sbjct: 387 KEAEELLVRMKLEERCV------PNAVTYNCLIDGYCRAGKLETAKEVVSR-MKEDEIKP 439
Query: 123 --LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
++ T++ G CR + M + +V Y LI AM
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
EKML++ P ++++++ L + H++ RV + + ++ I L
Sbjct: 500 EKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDK 559
Query: 241 GHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
+ +K +E++ + K+G + ++ F K +++ ++ + +
Sbjct: 560 NNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQEL----TCLNDLVTALEARGKVEEA 348
AVI C + + EA L ++ GLH ++ N L+ A G +A
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDM---GLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 44/268 (16%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQ-RGDYD- 63
G + T+ TLIH+ CS N+++A+ +E M + D+ Y LI LCQ R D+D
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 64 ------------------------------KAEKLFDELFEKEIVLCKFGSQPLAASYKP 93
AEK+++ L + E K G +P + +Y
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME----KEGKKPDSITYNT 586
Query: 94 IFQYLCEHGKTRKAERVLRQIMKRGTQDP--LSYMTVIMGHCREGAYENGYELLIWM-LR 150
+ + +H ER++ Q+ + G DP +Y VI +C G + +L M L
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGL-DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLH 645
Query: 151 RDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHE 210
P+ IY+ LI+ F + A+ E+M P T++++ L EK
Sbjct: 646 SKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKT---- 701
Query: 211 SARVTVMMLDRNIRQNINLSTKSIELLF 238
+ ++D + Q+ + ++E+L
Sbjct: 702 QGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 88/201 (43%), Gaps = 9/201 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+GGFS D +N LI C N ++ ++ +M+ DS +Y+ LI + D++
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP- 122
E++ +++ E G P +Y + C G+ +A ++ + + +P
Sbjct: 599 SVERMMEQMRED-------GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPN 651
Query: 123 -LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+ Y +I + G + L M + P+VE Y+ L +K + ++ ++
Sbjct: 652 TVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMD 711
Query: 182 KMLKSSYLPKTSTWHSILARL 202
+M++ S P T ++ RL
Sbjct: 712 EMVEQSCEPNQITMEILMERL 732
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 130/310 (41%), Gaps = 34/310 (10%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PDT FN +I++ +GNLD+A+K+FE MK +++++ LI+ + G +++
Sbjct: 384 GLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEES 443
Query: 66 EKLFDELFEKEIV-----------------------------LCKFGSQPLAASYKPIFQ 96
+L D + E++ + +G +P ++ + +
Sbjct: 444 SRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAK 503
Query: 97 YLCEHGKTRKAERVL--RQIMKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
G T AE ++ R + + + + T++ G+C EG E M
Sbjct: 504 AYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVH 563
Query: 155 PDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARV 214
P++ +++ LI GFL + E ++ M + P T+ +++ G +
Sbjct: 564 PNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEI 623
Query: 215 TVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCK 271
ML+ I +I+ + + G +KA +I+ + K G V +++ C
Sbjct: 624 YTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCS 683
Query: 272 RGKLPEARKL 281
G++ +A ++
Sbjct: 684 AGEMKKAMQV 693
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 109/248 (43%), Gaps = 6/248 (2%)
Query: 98 LCEHGKTRKAERVLRQIMKRGTQDPL-SYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
L E G+ ++A + +++ G + L +Y T++ R+ + + L+ + + PD
Sbjct: 329 LIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPD 388
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
+++ +I+ + AM+ EKM +S P ST+++++ + G ES+R+
Sbjct: 389 TILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLD 448
Query: 217 MML-DRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKR 272
MML D ++ N ++ ++A+ IV + G V + + +
Sbjct: 449 MMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARI 508
Query: 273 GKLPEARKLLLFS-LKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTC 331
G A +++ L N ++ C ++ G CE ++ EA Y + E G+H L
Sbjct: 509 GSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFV 568
Query: 332 LNDLVTAL 339
N L+
Sbjct: 569 FNSLIKGF 576
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/371 (16%), Positives = 153/371 (41%), Gaps = 13/371 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P T+ TL+ + + L + ++ + D+ ++ +I + G+ D+A
Sbjct: 349 GHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 408
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--L 123
K+F+++ E G +P A+++ + + + GK ++ R+L +++ P
Sbjct: 409 MKIFEKMKES-------GCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDR 461
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME-TLEK 182
+ ++ C + E + ++ M PDV ++ L + + A + + +
Sbjct: 462 TCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPR 521
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
ML + P T +I+ E+G E+ R M + + N+ + I+
Sbjct: 522 MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 581
Query: 243 RDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNA 299
D E+V+L+ + G V ++ G + ++ L+ + DI +
Sbjct: 582 MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSI 641
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLE 359
+ G +A + ++ + G+ + +++ + G++++A + K++ G+
Sbjct: 642 LAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIV 701
Query: 360 NLDRSVLSYSS 370
L ++ +Y +
Sbjct: 702 GLSPNLTTYET 712
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 148/356 (41%), Gaps = 27/356 (7%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQ------VTADSASYSILIRNLCQRGDY 62
PD T LI++ C + +DEAL+VFE M+ + + ADS ++ LI LC+ G
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 63 DKAEKLFDEL-FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQD 121
+AE+L + E+ V P A +Y + C GK A+ V+ + MK
Sbjct: 387 KEAEELLVRMKLEERCV-------PNAVTYNCLIDGYCRAGKLETAKEVVSR-MKEDEIK 438
Query: 122 P--LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
P ++ T++ G CR + M + +V Y LI AM
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
EKML++ P ++++++ L + H++ RV + + ++ I L
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 240 HGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL 296
+ +K +E++ + K+G + ++ F K +++ ++ + +
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQEL----TCLNDLVTALEARGKVEEA 348
AVI C + + EA L ++ GLH ++ N L+ A G +A
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDM---GLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 99/235 (42%), Gaps = 40/235 (17%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQ-RGDYD- 63
G + T+ TLIH+ CS N+++A+ +E M + D+ Y LI LCQ R D+D
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 64 ------------------------------KAEKLFDELFEKEIVLCKFGSQPLAASYKP 93
AEK+++ L + E K G +P + +Y
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME----KEGKKPDSITYNT 586
Query: 94 IFQYLCEHGKTRKAERVLRQIMKRGTQDP--LSYMTVIMGHCREGAYENGYELLIWM-LR 150
+ + +H ER++ Q+ + G DP +Y VI +C G + +L M L
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGL-DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLH 645
Query: 151 RDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEK 205
P+ IY+ LI+ F + A+ E+M P T++++ L EK
Sbjct: 646 SKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEK 700
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMK-NFQVTADSASYSILIRNLCQRGDY 62
+ G P T+ +I ++CS G LDEALK+F++M + +V ++ Y+ILI + G++
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNF 668
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCE--HGKT 104
+A L +E+ K + +P +Y +F+ L E G+T
Sbjct: 669 GQALSLKEEMKMKMV-------RPNVETYNALFKCLNEKTQGET 705
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 113/231 (48%), Gaps = 15/231 (6%)
Query: 7 FSPDTCTFNTLIHSHCS-AGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
F+P N ++ S G L +A ++F++ + V ++ SY++L++ C D A
Sbjct: 150 FTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIA 209
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
+LF ++ E+++V P SYK + Q C G+ A +L ++ +G +
Sbjct: 210 YQLFGKMLERDVV-------PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGF---VPD 259
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
T+I G C +G ++ G + L M+ + F P + +CL+ GF K A + +E ++K
Sbjct: 260 RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMK 319
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIEL 236
+ + TW ++ + + ES ++ + L+ +++ I T+ +++
Sbjct: 320 NGETLHSDTWEMVIPLICNE---DESEKIK-LFLEDAVKEEITGDTRIVDV 366
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 12/211 (5%)
Query: 79 LCKFGSQPLAASYKPIFQYLCEH-GKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREG 136
+ +F P I L H G +KA + + G + SY ++ C
Sbjct: 145 MLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLND 204
Query: 137 AYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWH 196
Y+L ML RD +PDV+ Y LI GF +K + AME L+ ML ++P
Sbjct: 205 DLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----R 260
Query: 197 SILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKK 256
+++ L ++G E + M+ + + ++S ++ G ++A ++VE++ K
Sbjct: 261 TLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKN 320
Query: 257 GFCV---KIEEVVQFLCKRGKLPEARKLLLF 284
G + E V+ +C E+ K+ LF
Sbjct: 321 GETLHSDTWEMVIPLICNED---ESEKIKLF 348
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 140/335 (41%), Gaps = 11/335 (3%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
N L+ C D A +VF+ M D SY IL++ C G ++A L +
Sbjct: 154 ALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSM 213
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP-LSYMTVIMG 131
F + + + GS Y+ + LC+ G+ A +L +I+++G + P Y + G
Sbjct: 214 FWR---ISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAG 270
Query: 132 HCREGA--YENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
H + E LL L R +P ++ Y + ++ K + E L M +
Sbjct: 271 HWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFE 330
Query: 190 PKTSTWHSILARLLEKGFPHESARV-TVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFE 248
P + + + L G E+ V M+ + + + I+ L G +A
Sbjct: 331 PTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVG 390
Query: 249 IVELLYKKGFCVKIEEVVQFL----CKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
++ + K+ CV EE Q L C+ G+ EA +++ L H ++ + +I GL
Sbjct: 391 YLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGL 450
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
C+++R EA E+V + + E + L ++
Sbjct: 451 CDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 149/371 (40%), Gaps = 69/371 (18%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENM-KNFQVTADSASYSILIRNLCQRGDYDKAEKLFDE 71
+F+TL+ L+ A +F ++V + + ++L++ LCQ D A ++F E
Sbjct: 118 SFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQE 177
Query: 72 LFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-----DPLSYM 126
+ + G P SY+ + + C GK +A +L + R +Q D + Y
Sbjct: 178 MNYQ-------GCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYR 230
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
++ C G ++ E+L +LR+ Y + G + +E ++++L
Sbjct: 231 ILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSE--GIERVKRLLTE 288
Query: 187 SY----LPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
+ +P ++ ++ L E+G E V + M
Sbjct: 289 TLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAM------------------------ 324
Query: 243 RDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNV-DIDLCNAVI 301
R K FE +Y V+ LC+ GKL EA ++ + H + + + N +I
Sbjct: 325 RSKGFEPTPFIYGAK--------VKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLI 376
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLND------LVTALEARGKVEEAA------ 349
GLC+ + +EA G K + ++++C+ + LV L G+ EA+
Sbjct: 377 KGLCDDGKSMEAVGYL-----KKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEM 431
Query: 350 FISKRIPGLEN 360
I PG+E
Sbjct: 432 LIKSHFPGVET 442
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 107/255 (41%), Gaps = 37/255 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTA-------------DSASYSI- 51
G D + L+ + C AG +D+A+++ + + A +S+S I
Sbjct: 221 GSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIE 280
Query: 52 ---------LIRNL--CQRGDYDKAEKLFDE--LFEKEIVLCKF---GSQPLAASYKPIF 95
LIR C A LF+E L E E VL G +P Y
Sbjct: 281 RVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKV 340
Query: 96 QYLCEHGKTRKAERVLRQIMKRGTQDPL--SYMTVIMGHCREGAYENGYELLIWMLRR-D 152
+ LC GK ++A V+ + M +G P Y +I G C +G L M ++
Sbjct: 341 KALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVS 400
Query: 153 FLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESA 212
+ + E Y L+DG + + L A + +E+ML S+ P T+H ++ L + +E+
Sbjct: 401 CVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEA- 459
Query: 213 RVTVMMLDRNIRQNI 227
VM L+ + Q++
Sbjct: 460 ---VMWLEEMVSQDM 471
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 100/254 (39%), Gaps = 37/254 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEA----LKVFENMKNFQVTADSASYSILIRNLCQRGD 61
G PD ++ L+ C G L+EA +F + D Y IL+ LC G+
Sbjct: 182 GCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGE 241
Query: 62 YDKAEKLFDELFEKEIVLCK------------------------------FGSQPLAASY 91
D A ++ ++ K + K G+ P SY
Sbjct: 242 VDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSY 301
Query: 92 KPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELL-IWML 149
+ L E GK + E VL + +G + P Y + CR G + ++ M+
Sbjct: 302 SAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMM 361
Query: 150 RRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS-SYLPKTSTWHSILARLLEKGFP 208
+ LP V +Y+ LI G K + A+ L+KM K S + T+ +++ L G
Sbjct: 362 QGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQF 421
Query: 209 HESARVTVMMLDRN 222
E+++V ML ++
Sbjct: 422 LEASQVMEEMLIKS 435
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 140/335 (41%), Gaps = 11/335 (3%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
N L+ C D A +VF+ M D SY IL++ C G ++A L +
Sbjct: 154 ALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSM 213
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP-LSYMTVIMG 131
F + + + GS Y+ + LC+ G+ A +L +I+++G + P Y + G
Sbjct: 214 FWR---ISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAG 270
Query: 132 HCREGA--YENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
H + E LL L R +P ++ Y + ++ K + E L M +
Sbjct: 271 HWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFE 330
Query: 190 PKTSTWHSILARLLEKGFPHESARV-TVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFE 248
P + + + L G E+ V M+ + + + I+ L G +A
Sbjct: 331 PTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVG 390
Query: 249 IVELLYKKGFCVKIEEVVQFL----CKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
++ + K+ CV EE Q L C+ G+ EA +++ L H ++ + +I GL
Sbjct: 391 YLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGL 450
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
C+++R EA E+V + + E + L ++
Sbjct: 451 CDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 149/371 (40%), Gaps = 69/371 (18%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENM-KNFQVTADSASYSILIRNLCQRGDYDKAEKLFDE 71
+F+TL+ L+ A +F ++V + + ++L++ LCQ D A ++F E
Sbjct: 118 SFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQE 177
Query: 72 LFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-----DPLSYM 126
+ + G P SY+ + + C GK +A +L + R +Q D + Y
Sbjct: 178 MNYQ-------GCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYR 230
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
++ C G ++ E+L +LR+ Y + G + +E ++++L
Sbjct: 231 ILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSE--GIERVKRLLTE 288
Query: 187 SY----LPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
+ +P ++ ++ L E+G E V + M
Sbjct: 289 TLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAM------------------------ 324
Query: 243 RDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNV-DIDLCNAVI 301
R K FE +Y V+ LC+ GKL EA ++ + H + + + N +I
Sbjct: 325 RSKGFEPTPFIYGAK--------VKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLI 376
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLND------LVTALEARGKVEEAA------ 349
GLC+ + +EA G K + ++++C+ + LV L G+ EA+
Sbjct: 377 KGLCDDGKSMEAVGYL-----KKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEM 431
Query: 350 FISKRIPGLEN 360
I PG+E
Sbjct: 432 LIKSHFPGVET 442
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 107/255 (41%), Gaps = 37/255 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTA-------------DSASYSI- 51
G D + L+ + C AG +D+A+++ + + A +S+S I
Sbjct: 221 GSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIE 280
Query: 52 ---------LIRNL--CQRGDYDKAEKLFDE--LFEKEIVLCKF---GSQPLAASYKPIF 95
LIR C A LF+E L E E VL G +P Y
Sbjct: 281 RVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKV 340
Query: 96 QYLCEHGKTRKAERVLRQIMKRGTQDPL--SYMTVIMGHCREGAYENGYELLIWMLRR-D 152
+ LC GK ++A V+ + M +G P Y +I G C +G L M ++
Sbjct: 341 KALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVS 400
Query: 153 FLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESA 212
+ + E Y L+DG + + L A + +E+ML S+ P T+H ++ L + +E+
Sbjct: 401 CVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEA- 459
Query: 213 RVTVMMLDRNIRQNI 227
VM L+ + Q++
Sbjct: 460 ---VMWLEEMVSQDM 471
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 100/254 (39%), Gaps = 37/254 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEA----LKVFENMKNFQVTADSASYSILIRNLCQRGD 61
G PD ++ L+ C G L+EA +F + D Y IL+ LC G+
Sbjct: 182 GCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGE 241
Query: 62 YDKAEKLFDELFEKEIVLCK------------------------------FGSQPLAASY 91
D A ++ ++ K + K G+ P SY
Sbjct: 242 VDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSY 301
Query: 92 KPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELL-IWML 149
+ L E GK + E VL + +G + P Y + CR G + ++ M+
Sbjct: 302 SAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMM 361
Query: 150 RRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS-SYLPKTSTWHSILARLLEKGFP 208
+ LP V +Y+ LI G K + A+ L+KM K S + T+ +++ L G
Sbjct: 362 QGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQF 421
Query: 209 HESARVTVMMLDRN 222
E+++V ML ++
Sbjct: 422 LEASQVMEEMLIKS 435
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 147/355 (41%), Gaps = 25/355 (7%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQ------VTADSASYSILIRNLCQRGDY 62
PD T LI++ C + +DEAL+VFE M+ + + ADS ++ LI LC+ G
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP 122
+AE+L + +E P A +Y + C GK A+ V+ + MK P
Sbjct: 387 KEAEELLVRMKLEE------RCAPNAVTYNCLIDGYCRAGKLETAKEVVSR-MKEDEIKP 439
Query: 123 --LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
++ T++ G CR + M + +V Y LI AM
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
EKML++ P ++++++ L + H++ RV + + ++ I L
Sbjct: 500 EKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDK 559
Query: 241 GHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
+ +K +E++ + K+G + ++ F K +++ ++ + +
Sbjct: 560 NNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQEL----TCLNDLVTALEARGKVEEA 348
AVI C + + EA L ++ GLH ++ N L+ A G +A
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDM---GLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 111/268 (41%), Gaps = 44/268 (16%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQ-RGDYD- 63
G + T+ TLIH+ CS N+++A+ +E M + D+ Y LI LCQ R D+D
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 64 ------------------------------KAEKLFDELFEKEIVLCKFGSQPLAASYKP 93
EK+++ L + E K G +P + +Y
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDME----KEGKKPDSITYNT 586
Query: 94 IFQYLCEHGKTRKAERVLRQIMKRGTQDP--LSYMTVIMGHCREGAYENGYELLIWM-LR 150
+ + +H ER++ Q+ + G DP +Y VI +C G + +L M L
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGL-DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLH 645
Query: 151 RDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHE 210
P+ IY+ LI+ F + A+ E+M P T++++ L EK
Sbjct: 646 SKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEK----T 701
Query: 211 SARVTVMMLDRNIRQNINLSTKSIELLF 238
+ ++D + Q+ + ++E+L
Sbjct: 702 QGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 88/201 (43%), Gaps = 9/201 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+GGFS D +N LI C N ++ ++ +M+ DS +Y+ LI + D++
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP- 122
E++ +++ E G P +Y + C G+ +A ++ + + +P
Sbjct: 599 SVERMMEQMRED-------GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPN 651
Query: 123 -LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+ Y +I + G + L M + P+VE Y+ L +K + ++ ++
Sbjct: 652 TVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMD 711
Query: 182 KMLKSSYLPKTSTWHSILARL 202
+M++ S P T ++ RL
Sbjct: 712 EMVEQSCEPNQITMEILMERL 732
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 33/230 (14%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
MK + +P+ T+N LI +C AG L+ A +V MK ++ + + + ++ +C+
Sbjct: 396 MKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 61 DYDKAEKLFDELFEKEIV-----------------------------LCKFGSQPLAASY 91
+ A F ++ EKE V + + G P A Y
Sbjct: 456 GLNMAVVFFMDM-EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIY 514
Query: 92 KPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLR 150
+ LC+ + A RV+ ++ + G + D L+Y +I C + E YE+L M +
Sbjct: 515 YALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEK 574
Query: 151 RDFLPDVEIYDCLIDGFLQKDKPLLAME-TLEKMLKSSYLPKTSTWHSIL 199
PD Y+ LI F K K ++E +E+M + P +T+ +++
Sbjct: 575 EGKKPDSITYNTLI-SFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI 623
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 133/352 (37%), Gaps = 45/352 (12%)
Query: 2 KGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGD 61
+ + ++P + + L S S + K+ + MK+ + + +I + G
Sbjct: 102 RSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGH 161
Query: 62 YDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ- 120
D+A +LF+ V G Q Y + LC+ A ++R+++++G +
Sbjct: 162 VDQAVELFNG------VPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKP 215
Query: 121 DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
D +Y ++ G C G + E L M RR F P D LI+G L A E +
Sbjct: 216 DKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMV 275
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
KM K ++P T++ + IE +
Sbjct: 276 SKMTKGGFVPDIQTFNIL-----------------------------------IEAISKS 300
Query: 241 GHRDKAFEIVELLYKKGFCVKIE---EVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
G + E+ K G CV I+ ++ + K GK+ EA +LL +++ H L
Sbjct: 301 GEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLY 360
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
+I G+C +AF ++ K L+T GK +AA
Sbjct: 361 APIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAA 412
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 16/208 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G S D +F TLI + G L+ AL++++ M T++ Y+ ++ L +RG A
Sbjct: 461 GLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAA 520
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
E + + + K+IV +Y + + G +A+ +L ++ K+ + +S
Sbjct: 521 EAVVNAMEIKDIV-----------TYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSL 569
Query: 126 MT--VIMGH-CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+T +++ H C+ G+YE E+L +M+ R +PD Y LI F + +E +
Sbjct: 570 VTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDY 629
Query: 183 MLKSSYLPKTSTWHSILARLL--EKGFP 208
++ P + SI+ LL E G P
Sbjct: 630 LILQGVTPHEHIYLSIVRPLLDRENGRP 657
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 140/339 (41%), Gaps = 12/339 (3%)
Query: 5 GGF-SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
G F SP+ T+N++I+ C AG LD A ++ +M V + +Y L+ + G D
Sbjct: 284 GNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSD 343
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
+A +L DE+ K +V+ Y I +L G A VLR + + Q D
Sbjct: 344 EALRLCDEMTSKGLVVN-------TVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDR 396
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+ V+ G CR G + E + + + D+ ++ L+ F++ K A + L
Sbjct: 397 FTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGS 456
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
ML ++ +++ L++G + + M+ N N+ + + L G
Sbjct: 457 MLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGM 516
Query: 243 RDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC--NAV 300
A +V + K V ++ K G + EA +L K + L N +
Sbjct: 517 AGAAEAVVNAMEIKDI-VTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIM 575
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
I LC+ +A + +VE+G+ + L+T+
Sbjct: 576 INHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSF 614
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 146/351 (41%), Gaps = 20/351 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ + TFN +I+S C L EAL VF M V + S++++I C+ GD A
Sbjct: 213 GYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFA 272
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+L ++ ++ F S P A +Y + C+ G+ AER+ ++K G + +
Sbjct: 273 LQLLGKM---GMMSGNFVS-PNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERT 328
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ + R G+ + L M + + + IY+ ++ + AM L M
Sbjct: 329 YGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMN 388
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ T ++ L G+ E+ + ++ + ++I L H RD
Sbjct: 389 SKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNT----LMHHFVRD 444
Query: 245 K----AFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
K A +I+ + +G + ++ K GKL A ++ +K + ++ +
Sbjct: 445 KKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIY 504
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
N+++ GL + G +V +++ N L+ G VEEA
Sbjct: 505 NSIVNGLSKRGMA----GAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEA 551
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 153/344 (44%), Gaps = 29/344 (8%)
Query: 17 LIHSHCSAGNL-DEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEK 75
++ + C+ NL DEAL V F V AD+ +Y+++IR +GD + A+ L E+
Sbjct: 135 IVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMD-- 192
Query: 76 EIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCR 134
C G P +Y + C GK A R+ +++ K + ++Y ++ G C+
Sbjct: 193 ----C-VGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCK 247
Query: 135 EGAYENGYELLIWMLRRD----FLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLP 190
G E ELL M + D P+ Y +I F +K + A+ L++M +P
Sbjct: 248 SGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMP 307
Query: 191 KTSTWHSILARLLEKGFPHESARVTVMMLDRNIR-QNINLS---TKSIELLFGHGHRDKA 246
T ++ +LE E + ++D+ ++ ++LS + + L ++A
Sbjct: 308 NRVTACVLIQGVLEN---DEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEA 364
Query: 247 FEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNV----DIDLCNA 299
+I L+ +G + V + LC + + LL+ +V D D+
Sbjct: 365 EKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDC--FLLYQEIEKKDVKSTIDSDIHAV 422
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARG 343
++LGLC+ EA L +++K + +++ + ++ AL+ G
Sbjct: 423 LLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTG 466
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 125/285 (43%), Gaps = 56/285 (19%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+ ++I+ +C+AG +D+A ++ + M +S +YS ++ +C+ GD ++A
Sbjct: 195 GLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERA 254
Query: 66 EKLFDELFEKEIVLCKFGS--QPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
+L E+ EKE G P A +Y + Q CE + +A VL ++ RG +
Sbjct: 255 LELLAEM-EKE----DGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNR 309
Query: 123 LSYMTVIMG---------------------------HCREGA---------YENGYELLI 146
++ +I G C A +E ++
Sbjct: 310 VTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFR 369
Query: 147 WMLRRDFLPD----VEIYD--CLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSI-L 199
ML R PD ++ CL++ +L D LL E +K +KS+ S H++ L
Sbjct: 370 LMLVRGVRPDGLACSHVFRELCLLERYL--DCFLLYQEIEKKDVKSTI---DSDIHAVLL 424
Query: 200 ARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
L ++G E+A++ MLD+ +R ++ K IE L G D
Sbjct: 425 LGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGDED 469
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 8/196 (4%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+ + T+ TLI +C ++DEAL++ E M++ + +Y+ ++R LC+ G +A +
Sbjct: 304 TANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANR 363
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
L E+ K+I +P + + C+ A +V +++++ G + D SY
Sbjct: 364 LLTEMSGKKI-------EPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYK 416
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+I G C+ EN E L M+ + F P Y L+DGF ++K + LE+ K
Sbjct: 417 ALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKR 476
Query: 187 SYLPKTSTWHSILARL 202
+ + ++ R+
Sbjct: 477 GLCADVALYRGLIRRI 492
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 150/377 (39%), Gaps = 35/377 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P L++S D K+F+ M V A+ Y++L+ + GD +KA
Sbjct: 163 GLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKA 222
Query: 66 EKLFDELFEKEI------------VLCK----------------FGSQPLAASYKPIFQY 97
EKL E+ EK + V CK G P +Y
Sbjct: 223 EKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHG 282
Query: 98 LCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDV 157
G+ R+A R+ R+I T + ++Y T+I G+CR + L M R F P V
Sbjct: 283 FSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGV 342
Query: 158 EIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVM 217
Y+ ++ + + A L +M P T ++++ + + +V
Sbjct: 343 VTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKK 402
Query: 218 MLDRNIRQNINLSTKSI-----ELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKR 272
M++ ++ ++ S K++ ++L +++ F ++E + G+ +V +
Sbjct: 403 MIESGLKLDM-YSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYAT-YSWLVDGFYNQ 460
Query: 273 GKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCL 332
K E KLL K D+ L +I +C++ +V A L + +KGL +
Sbjct: 461 NKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIF 520
Query: 333 NDLVTALEARGKVEEAA 349
+ A GKV EA+
Sbjct: 521 TTMAYAYWRTGKVTEAS 537
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 149/350 (42%), Gaps = 15/350 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P ++N++I +++ + ++ D +Y I++ LC++ D D A
Sbjct: 507 GCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAA 566
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ D + E G +P A Y I L + G+ +AE ++++ G Q D ++
Sbjct: 567 FAIIDAMEE-------LGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIA 619
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
YM +I + R G + EL+ +++ P Y LI GF++ + L+KML
Sbjct: 620 YMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKML 679
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P + +++ L+KG S + +M + +I+ + + L+ R
Sbjct: 680 EDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARK 739
Query: 245 KAFEIV------ELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
K +++ +LL + + + L G A + ++ +K ++ L N
Sbjct: 740 KKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAME-VIGKVKKSIIPNLYLHN 798
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+I G C R+ EA+ + ++G+ L L+ + G +E A
Sbjct: 799 TIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESA 848
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 131/308 (42%), Gaps = 41/308 (13%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
F D C FNTLIH G LD+ +F M V ++ +Y I+I + C+ G+ D A
Sbjct: 303 FELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYAL 362
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYM 126
+LF E + S+ + IF + + G + + ++R + D ++Y
Sbjct: 363 RLFVNNTGSEDI-----SRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYF 417
Query: 127 TVI--MGHCREGAY---------ENGYELLIWMLRRDFLPDVEI-YDCLIDGFLQKDKPL 174
++ + C E Y +NG + ++ D L ++E+ + L+ +KD L
Sbjct: 418 VLLKMLPKCHELKYAMVILQSILDNGCGINPPVI--DDLGNIEVKVESLLGEIARKDANL 475
Query: 175 -------------------LAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVT 215
A+ +EKM+ P +++S++ L ++ + A +
Sbjct: 476 AAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLV 535
Query: 216 VMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF--CVKI-EEVVQFLCKR 272
++ + + +++ + L RD AF I++ + + G V I ++ L K+
Sbjct: 536 NIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQ 595
Query: 273 GKLPEARK 280
G++ EA +
Sbjct: 596 GRVVEAEE 603
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/360 (18%), Positives = 136/360 (37%), Gaps = 42/360 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ D + L+ +C N+ A++++ M D ++ LI + G DK
Sbjct: 267 GYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKG 326
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS- 124
+F ++ +K G Q +Y + C+ G A R+ + G++D
Sbjct: 327 RVMFSQMIKK-------GVQSNVFTYHIMIGSYCKEGNVDYALRLF--VNNTGSEDISRN 377
Query: 125 ---YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
Y +I G ++G + +LL+ ML +PD Y L+ + + AM L+
Sbjct: 378 VHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQ 437
Query: 182 KMLKSSYLPKTSTW----------HSILARLLEKGFPHESARVTVMMLDRNIRQNINLST 231
+L + S+L + K + + V+ ++N +
Sbjct: 438 SILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAAL 497
Query: 232 KSIELLFGHGHRDKAF---EIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKN 288
IE + G F +++ L+++ + +V + + +P
Sbjct: 498 SRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVP------------ 545
Query: 289 HHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
D+D V+ LC+ N AF + + E GL + + ++ +L +G+V EA
Sbjct: 546 ----DVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEA 601
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 25/131 (19%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ NT+I +C+AG LDEA E+M+ + + +Y+IL+++ + GD + A L
Sbjct: 792 PNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL 851
Query: 69 F-------DELFEKEIV--LCKF----------------GSQPLAASYKPIFQYLCEHGK 103
F D++ ++ LC F G P SY+ + Q LC
Sbjct: 852 FEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRL 911
Query: 104 TRKAERVLRQI 114
T +A +V++ +
Sbjct: 912 TMEAVKVVKDM 922
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 150/375 (40%), Gaps = 18/375 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T N ++ ++ S +AL FE MK +V D+ +++I+I L + G
Sbjct: 109 DNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSS 168
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
+A LF+ + EK + +P ++ I G+ V ++ G + +
Sbjct: 169 QALDLFNSMREK-----RAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 223
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+SY ++ + G +L + + +PDV Y CL++ + + +P A E
Sbjct: 224 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 283
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M K P T+++++ GF E+ + M I+ N+ S+ L
Sbjct: 284 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV----VSVCTLLAACS 339
Query: 243 RDKAFEIVELLYKKGFCVKIE-EVVQFLCKRGKLPEA----RKLLLFSLKNHHNVDIDLC 297
R K V+ + I + G A + + L+ V D
Sbjct: 340 RSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSV 399
Query: 298 NAVIL--GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
IL G C +++ EA E+ + + + ++ A +G+V EA I ++
Sbjct: 400 TFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 459
Query: 356 PGLENLDRSVLSYSS 370
+ + V++Y+S
Sbjct: 460 K-MAGCEPDVIAYTS 473
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 79/169 (46%), Gaps = 8/169 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + +T +N+ I S+ +A L++A+ ++++M+ +V ADS +++ILI C+ Y +A
Sbjct: 358 GINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEA 417
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
E+ + I L K Y + + G+ +AE + Q+ G + D ++
Sbjct: 418 ISYLKEMEDLSIPLTK-------EVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIA 470
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKP 173
Y +++ + + EL + M PD L+ F + +P
Sbjct: 471 YTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQP 519
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 13/223 (5%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M + G PD T+NTL+ + NLD A+KVFE+M+ + D +Y+ +I + G
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-T 119
+AE+LF EL K G P A +Y + T K + V +Q+ K G
Sbjct: 347 LAAEAERLFMELELK-------GFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFG 399
Query: 120 QDPLSYMTVIMGHCREGAYENGYEL---LIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLA 176
+D ++Y T+I + ++G + +L + + R+ PD Y LID + ++ + A
Sbjct: 400 KDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN--PDAITYTVLIDSLGKANRTVEA 457
Query: 177 METLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMML 219
+ +ML P T+ +++ + G E+ ML
Sbjct: 458 AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCML 500
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 140/315 (44%), Gaps = 18/315 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PD T+N+L+++ N ++ +V++ M+ D +Y+ +I ++G D A
Sbjct: 362 GFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLA 421
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
+L+ ++ K + G P A +Y + L + +T +A ++ +++ G + L +
Sbjct: 422 LQLYKDM--KGLS----GRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQT 475
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G+ + G E + MLR PD Y ++D L+ ++ A M+
Sbjct: 476 YSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMI 535
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH-R 243
+ P + L L+ G E+ + R++ + ++ I + G
Sbjct: 536 SDGHTPSYT-----LYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECF 590
Query: 244 DKAFEIVELLYKKGFCVKIEEVVQFL---CKRGKLPEARKLLLFSLKNHHNVDIDLCN-A 299
D A +++ G+ ++ + ++ L G+ EA +LL F LK H + L A
Sbjct: 591 DLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEF-LKEHASGSKRLITEA 649
Query: 300 VILGLCEINRVLEAF 314
+I+ C++N + A
Sbjct: 650 LIVLHCKVNNLSAAL 664
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 137/311 (44%), Gaps = 14/311 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDE--ALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
G PD +FNTLI++ +G L A+++ + ++N + D+ +Y+ L+ + + D
Sbjct: 255 GCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLD 314
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A K+F+++ E C QP +Y + G +AER+ ++ +G D
Sbjct: 315 GAVKVFEDM---EAHRC----QPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDA 367
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
++Y +++ RE E E+ M + F D Y+ +I + ++ + LA++ +
Sbjct: 368 VTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKD 427
Query: 183 MLK-SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
M S P T+ ++ L + E+A + MLD I+ + + I G
Sbjct: 428 MKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAG 487
Query: 242 HRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
R++A + + + G + ++ L + + +A L + + H L
Sbjct: 488 KREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYE 547
Query: 299 AVILGLCEINR 309
+ILGL + NR
Sbjct: 548 LMILGLMKENR 558
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 76/188 (40%), Gaps = 29/188 (15%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+NTLI +C +E + + M+N + +Y LI ++ ++A
Sbjct: 957 GLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQA 1016
Query: 66 EKLFDELFEKEIVLCK----------------------------FGSQPLAASYKPIFQY 97
E+LF+EL K + L + G +P A+ +
Sbjct: 1017 EQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVS 1076
Query: 98 LCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
G ++AE+VL + + L Y +VI + R Y +G E L+ M + PD
Sbjct: 1077 YSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPD 1136
Query: 157 VEIYDCLI 164
I+ C +
Sbjct: 1137 HRIWTCFV 1144
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 95/225 (42%), Gaps = 8/225 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D GF + ++ + AGN+ E K++ +MK Y ++I LC+
Sbjct: 850 DMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVR 909
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
AE + E+ E + + Y I Y +K +V ++I + G + D
Sbjct: 910 DAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDY-------KKTVQVYQRIKETGLEPDE 962
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y T+I+ +CR+ E GY L+ M P ++ Y LI F ++ A + E+
Sbjct: 963 TTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEE 1022
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNI 227
+L S +H+++ + G ++ ++ MM + I +
Sbjct: 1023 LLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTL 1067
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 150/375 (40%), Gaps = 18/375 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T N ++ ++ S +AL FE MK +V D+ +++I+I L + G
Sbjct: 241 DNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSS 300
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
+A LF+ + EK C+ P ++ I G+ V ++ G + +
Sbjct: 301 QALDLFNSMREKR-AECR----PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 355
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+SY ++ + G +L + + +PDV Y CL++ + + +P A E
Sbjct: 356 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 415
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M K P T+++++ GF E+ + M I+ N+ S+ L
Sbjct: 416 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV----VSVCTLLAACS 471
Query: 243 RDKAFEIVELLYKKGFCVKIE-EVVQFLCKRGKLPEA----RKLLLFSLKNHHNVDIDLC 297
R K V+ + I + G A + + L+ V D
Sbjct: 472 RSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSV 531
Query: 298 NAVIL--GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
IL G C +++ EA E+ + + + ++ A +G+V EA I ++
Sbjct: 532 TFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 591
Query: 356 PGLENLDRSVLSYSS 370
+ + V++Y+S
Sbjct: 592 K-MAGCEPDVIAYTS 605
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 79/169 (46%), Gaps = 8/169 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + +T +N+ I S+ +A L++A+ ++++M+ +V ADS +++ILI C+ Y +A
Sbjct: 490 GINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEA 549
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
E+ + I L K Y + + G+ +AE + Q+ G + D ++
Sbjct: 550 ISYLKEMEDLSIPLTK-------EVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIA 602
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKP 173
Y +++ + + EL + M PD L+ F + +P
Sbjct: 603 YTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQP 651
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 143/323 (44%), Gaps = 26/323 (8%)
Query: 14 FNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELF 73
F L+ SA + +A++V + M F D + L+ LC+ G A KLF+++
Sbjct: 186 FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR 245
Query: 74 EKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGH 132
+ V ++ + L C GK +A+ VL Q+ + G + D + Y ++ G+
Sbjct: 246 MRFPVNLRYFTSLLYG--------WCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGY 297
Query: 133 CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKT 192
G + Y+LL M RR F P+ Y LI + D+ AM+ +M +
Sbjct: 298 ANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADV 357
Query: 193 STWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKS-IELLFGHGHRDKAFEIVE 251
T+ ++++ + G ++LD I++ + S + + ++ H ++ E +E
Sbjct: 358 VTYTALVSGFCKWG----KIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLE 413
Query: 252 LLYKKGFCVKIEE---------VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
L+ K +IE V++ CK G++ EA +L +N + +D +I
Sbjct: 414 LMEKMR---QIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMIN 470
Query: 303 GLCEINRVLEAFGLCYELVEKGL 325
GL +LEA E+V +GL
Sbjct: 471 GLASQGCLLEASDHFKEMVTRGL 493
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 123/261 (47%), Gaps = 14/261 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ GF PD + L+ + +AG + +A + +M+ ++ Y++LI+ LC+ +
Sbjct: 280 EAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRME 339
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
+A K+F E+ ++ + +Y + C+ GK K VL ++K+G
Sbjct: 340 EAMKVFVEME-------RYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSE 392
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
L+YM +++ H ++ ++E EL+ M + ++ PD+ IY+ +I + + A+ +
Sbjct: 393 LTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNE 452
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M ++ P T+ ++ L +G E++ M+ R + T ++LL
Sbjct: 453 MEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGT--LKLLLNTVL 510
Query: 243 RDKAFEIVELLY----KKGFC 259
+DK E+ + ++ KG C
Sbjct: 511 KDKKLEMAKDVWSCITSKGAC 531
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 127/304 (41%), Gaps = 10/304 (3%)
Query: 49 YSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAE 108
+ +L++ KA ++ DE+ KFG +P + + LC+HG + A
Sbjct: 186 FVVLVQRFASADMVKKAIEVLDEM-------PKFGFEPDEYVFGCLLDALCKHGSVKDAA 238
Query: 109 RVLRQIMKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFL 168
++ + R + + +++ G CR G +L+ M F PD+ Y L+ G+
Sbjct: 239 KLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYA 298
Query: 169 QKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNIN 228
K A + L M + + P + + ++ L + E+ +V V M ++
Sbjct: 299 NAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVV 358
Query: 229 LSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLC---KRGKLPEARKLLLFS 285
T + G DK + +++ + KKG + + K+ E +L+
Sbjct: 359 TYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKM 418
Query: 286 LKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKV 345
+ ++ DI + N VI C++ V EA L E+ E GL + ++ L ++G +
Sbjct: 419 RQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCL 478
Query: 346 EEAA 349
EA+
Sbjct: 479 LEAS 482
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/360 (19%), Positives = 150/360 (41%), Gaps = 17/360 (4%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
T++ +I ++ E K+F M V D + +++ GD + + +
Sbjct: 148 TWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHS-- 205
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGH 132
V+ K G I + G+ A + R++ +R D +++ +V++ +
Sbjct: 206 -----VVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER---DVIAWNSVLLAY 257
Query: 133 CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKT 192
C+ G +E EL+ M + P + ++ LI G+ Q K AM+ ++KM
Sbjct: 258 CQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADV 317
Query: 193 STWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVEL 252
TW ++++ L+ G +++ + M + N ++ ++ E+ +
Sbjct: 318 FTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSI 377
Query: 253 LYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINR 309
K GF + +V K GKL +ARK + S+KN D+ N++I G C+
Sbjct: 378 AVKMGFIDDVLVGNSLVDMYSKCGKLEDARK-VFDSVKNK---DVYTWNSMITGYCQAGY 433
Query: 310 VLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYS 369
+A+ L + + L + N +++ G EA + +R+ + R+ +++
Sbjct: 434 CGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWN 493
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 107/249 (42%), Gaps = 12/249 (4%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D +N+++ ++C G +EA+++ + M+ ++ +++ILI Q G D A L
Sbjct: 246 DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLM 305
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTV 128
++ FG ++ + L +G +A + R++ G + ++ M+
Sbjct: 306 QKME-------TFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSA 358
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
+ G E+ ++ F+ DV + + L+D + + K +E K+ S
Sbjct: 359 VSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGK----LEDARKVFDSVK 414
Query: 189 LPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFE 248
TW+S++ + G+ ++ + M D N+R NI I +G +A +
Sbjct: 415 NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMD 474
Query: 249 IVELLYKKG 257
+ + + K G
Sbjct: 475 LFQRMEKDG 483
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 72/153 (47%), Gaps = 13/153 (8%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF D N+L+ + G L++A KVF+++KN D +++ +I CQ G KA
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN----KDVYTWNSMITGYCQAGYCGKA 437
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG--TQDPL 123
+LF + + + +P ++ + ++G +A + +++ K G ++
Sbjct: 438 YELFTRMQDANL-------RPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTA 490
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
++ +I G+ + G + EL M F+P+
Sbjct: 491 TWNLIIAGYIQNGKKDEALELFRKMQFSRFMPN 523
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 2 KGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGD 61
+ D PD T+ T++ + +AG +D A +V M V A+ +Y++L++ C++
Sbjct: 443 QDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQ 502
Query: 62 YDKAEKLFDEL-----FEKEIV------------------LCKF------GSQPLAASYK 92
D+AE L E+ E ++V L F G P SY
Sbjct: 503 IDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYT 562
Query: 93 PIFQYLCEHGKTRKAERVLRQIMK--RGTQDPLSYMTVIMGHCREGAYENGYELLIWMLR 150
+ + G+ + A RV ++M R D +++ ++ G+CR G E+ ++ M
Sbjct: 563 TLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKE 622
Query: 151 RDFLPDVEIYDCLIDGFLQKDKP 173
F P+V Y L +G Q KP
Sbjct: 623 NGFYPNVATYGSLANGVSQARKP 645
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQR-GDYD 63
G PDT FN ++++ + G+ D+ K+FE M + D +Y+++I+ LC R G +
Sbjct: 230 GQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIK-LCARVGRKE 288
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQD 121
+ + + +K I +C L A+Y G R AER++ Q M+ +D
Sbjct: 289 LIVFVLERIIDKGIKVCMTTMHSLVAAY-------VGFGDLRTAERIV-QAMREKRRD 338
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 152/349 (43%), Gaps = 25/349 (7%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
+T ++N+L+H + +G LDEA +VF+ + D+ S++++I + ++GD A LF
Sbjct: 169 NTVSWNSLLHGYLESGELDEARRVFDKIPE----KDAVSWNLIISSYAKKGDMGNACSLF 224
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVI 129
+ K AS+ + + + K R M + ++ +S++T+I
Sbjct: 225 SAMPLKS-----------PASWNILIGGYV-NCREMKLARTYFDAMPQ--KNGVSWITMI 270
Query: 130 MGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML-KSSY 188
G+ + G ++ EL M ++D L +YD +I + Q KP A++ +ML ++SY
Sbjct: 271 SGYTKLGDVQSAEELFRLMSKKDKL----VYDAMIACYTQNGKPKDALKLFAQMLERNSY 326
Query: 189 L-PKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
+ P T S+++ + G V + + I+ + LST I+L G KAF
Sbjct: 327 IQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAF 386
Query: 248 EIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEI 307
++ L KK V ++ G EA L ++ ++ ++
Sbjct: 387 KMFSNLNKKD-TVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHS 445
Query: 308 NRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIP 356
V E + + + L +V L G++EEA + K +P
Sbjct: 446 GLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMP 494
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 119/282 (42%), Gaps = 30/282 (10%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D T+ LI + A + + L VFE M+ D+ +Y+I+IR+LC G D A
Sbjct: 219 GCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLA 278
Query: 66 EKLFDELFEKEIVL----------CKFGSQPLAA--------------SYKPIFQYL--- 98
+ + E+ EK I C S+ + S F YL
Sbjct: 279 LEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKS 338
Query: 99 -CEHGKTRKAERVLRQIM-KRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
C GK ++A ++R++ K D + ++ G CR + E++ M RR L D
Sbjct: 339 FCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRK-LDD 397
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
+Y +I G+L+++ A+E E + KS P+ ST+ I+ L + + +
Sbjct: 398 SNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFN 457
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF 258
M++ I + T + G +A+++ + +KG
Sbjct: 458 EMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGI 499
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 16/218 (7%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G GF P T ++ I + C G L+EAL + + + D +Y ++ L QRGD
Sbjct: 812 GKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDL 870
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLR--QIMKRGTQ 120
KA + + KEI G++P Y + Y K ++ E+VL Q M+ +
Sbjct: 871 QKALDKVNSM--KEI-----GTKPGVHVYTSLIVYFF---KEKQLEKVLETCQKMEGESC 920
Query: 121 DP--LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME 178
+P ++Y +I G+ G E + M R PD + Y I+ Q K A++
Sbjct: 921 EPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALK 980
Query: 179 TLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
L +ML P T + ++ L +G H+ AR+ +
Sbjct: 981 LLSEMLDKGIAPSTINFRTVFYGLNREG-KHDLARIAL 1017
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 108/282 (38%), Gaps = 14/282 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCS--AGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGD 61
D G P + TF LI C N++EA + F M D + LC+ G+
Sbjct: 741 DMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGN 800
Query: 62 YDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM-KRGTQ 120
A+ D L K G P+ +Y + LC GK +A L +R
Sbjct: 801 TKDAKSCLDSL-------GKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLL 852
Query: 121 DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
D +Y +++ G + G + + + M P V +Y LI F ++ + +ET
Sbjct: 853 DQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETC 912
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
+KM S P T+ +++ + G E+ M +R + +K I L
Sbjct: 913 QKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQA 972
Query: 241 GHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEAR 279
+ A +++ + KG + V L + GK AR
Sbjct: 973 CKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLAR 1014
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G PD+ ++ H + EA KVF +M+ + SYSI ++ LC+ YD
Sbjct: 461 ENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYD 520
Query: 64 KAEKLFDELFEKEIVL 79
+ K+F+++ +IV+
Sbjct: 521 EIIKIFNQMHASKIVI 536
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 9/190 (4%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG--DYDKAEKLFD 70
T+ +I + G + A++ F+ MK+ + S+++ LI LC++ + ++A + F
Sbjct: 715 TWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFR 774
Query: 71 ELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIM 130
E+ + G P + LCE G T+ A+ L + K G ++Y I
Sbjct: 775 EMI-------RSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIR 827
Query: 131 GHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLP 190
CR G E L L D Y ++ G LQ+ A++ + M + P
Sbjct: 828 ALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKP 887
Query: 191 KTSTWHSILA 200
+ S++
Sbjct: 888 GVHVYTSLIV 897
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 97/221 (43%), Gaps = 7/221 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G PD F L+ + AG + +A + +M+ + Y++LI+ LC
Sbjct: 264 EAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALC------ 317
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
+ EK DE + + ++G + +Y + C+ G K VL + K+G
Sbjct: 318 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ 377
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
++YM +++ H ++ +E EL+ M RR PD+ IY+ +I + + A+ +
Sbjct: 378 VTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNE 437
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI 223
M + P T+ ++ +GF E+ M+ R I
Sbjct: 438 MEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 141/320 (44%), Gaps = 19/320 (5%)
Query: 14 FNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELF 73
F L+ SA + +A++V + M + + D + L+ LC+ G +A K+F+++
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR 229
Query: 74 EKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGH 132
EK P + + C GK +A+ VL Q+ + G + D + + ++ G+
Sbjct: 230 EK--------FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGY 281
Query: 133 CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPL-LAMETLEKMLKSSYLPK 191
G + Y+L+ M +R F P+V Y LI + +K + AM +M +
Sbjct: 282 AHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEAD 341
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVE 251
T+ ++++ + G + V M + + + ++++ H +++ E +E
Sbjct: 342 IVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPS---QVTYMQIMVAHEKKEQFEECLE 398
Query: 252 LL--YKKGFC----VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLC 305
L+ K+ C + V++ CK G++ EA +L N + +D +I G
Sbjct: 399 LIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFT 458
Query: 306 EINRVLEAFGLCYELVEKGL 325
++EA E+V +G+
Sbjct: 459 SQGFLIEACNHFKEMVSRGI 478
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 130/305 (42%), Gaps = 13/305 (4%)
Query: 49 YSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAE 108
+ +L+R KA ++ DE+ K+G +P + + LC++G ++A
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEM-------PKYGLEPDEYVFGCLLDALCKNGSVKEAS 222
Query: 109 RVLRQIMKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFL 168
+V + ++ + + +++ G CREG E+L+ M PD+ ++ L+ G+
Sbjct: 223 KVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYA 282
Query: 169 QKDKPLLAMETLEKMLKSSYLPKTSTWHSILARL--LEKGFPHESARVTVMMLDRNIRQN 226
K A + + M K + P + + ++ L EK E+ RV V M +
Sbjct: 283 HAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRM-DEAMRVFVEMERYGCEAD 341
Query: 227 INLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLC---KRGKLPEARKLLL 283
I T I G DK + +++ + KKG +Q + K+ + E +L+
Sbjct: 342 IVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIE 401
Query: 284 FSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARG 343
+ + D+ + N VI C++ V EA L E+ GL + ++ ++G
Sbjct: 402 KMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQG 461
Query: 344 KVEEA 348
+ EA
Sbjct: 462 FLIEA 466
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 19/250 (7%)
Query: 6 GFSPDTCTFNTLIHSHC-SAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
GF P+ + LI + C + +DEA++VF M+ + AD +Y+ LI C+ G DK
Sbjct: 301 GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDK 360
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK---RGTQ- 120
+ D++ +K G P +Y Q + H K + E L I K RG
Sbjct: 361 GYSVLDDMRKK-------GVMPSQVTY---MQIMVAHEKKEQFEECLELIEKMKRRGCHP 410
Query: 121 DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
D L Y VI C+ G + L M P V+ + +I+GF + + A
Sbjct: 411 DLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHF 470
Query: 181 EKMLKSSYL--PKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIEL-- 236
++M+ P+ T S+L L+ + V + ++ +N+S +I +
Sbjct: 471 KEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHA 530
Query: 237 LFGHGHRDKA 246
L+ GH +A
Sbjct: 531 LYAKGHVKEA 540
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 105/239 (43%), Gaps = 31/239 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD F L+ + C G++ EA KVFE+M+ + + ++ L+ C+ G +A
Sbjct: 197 GLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEA 255
Query: 66 EKLFDEL----FEKEIVLC------------------------KFGSQPLAASYKPIFQY 97
+++ ++ E +IV+ K G +P Y + Q
Sbjct: 256 KEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQA 315
Query: 98 LCEHGK-TRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLP 155
LC K +A RV ++ + G + D ++Y +I G C+ G + GY +L M ++ +P
Sbjct: 316 LCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMP 375
Query: 156 DVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARV 214
Y ++ +K++ +E +EKM + P ++ ++ + G E+ R+
Sbjct: 376 SQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRL 434
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 109/242 (45%), Gaps = 11/242 (4%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENM-KNFQVTADSASYSILIRNLCQRGDYDKAEKLFDE 71
+FN L+ ++ ++ LDEA+K F+ + + +T D +Y+ +I+ LC++G D +F+E
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 72 LFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--LSYMTVI 129
L K G +P S+ + + + +R+ +MK P SY + +
Sbjct: 219 L-------EKNGFEPDLISFNTLLEEFYRRELFVEGDRIW-DLMKSKNLSPNIRSYNSRV 270
Query: 130 MGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
G R + + L+ M PDV Y+ LI + + M+ +M +
Sbjct: 271 RGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLT 330
Query: 190 PKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEI 249
P T T+ ++ L +KG + V+ + + N+ +E L G G D+A ++
Sbjct: 331 PDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQL 390
Query: 250 VE 251
V+
Sbjct: 391 VK 392
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 63/108 (58%), Gaps = 7/108 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SPD T+N LI ++ NL+E +K + MK +T D+ +Y +LI LC++GD D+A
Sbjct: 293 GISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRA 352
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ 113
++ +E + +++ S+P YKP+ + L GK +A ++++
Sbjct: 353 VEVSEEAIKHKLL-----SRP--NMYKPVVERLMGAGKIDEATQLVKN 393
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 105/263 (39%), Gaps = 10/263 (3%)
Query: 24 AGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFG 83
+G + A K+F+ M S++ L+ D+A K F EL E K G
Sbjct: 135 SGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPE------KLG 188
Query: 84 SQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGY 142
P +Y + + LC G + ++ K G + D +S+ T++ R + G
Sbjct: 189 ITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGD 248
Query: 143 ELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARL 202
+ M ++ P++ Y+ + G + K A+ ++ M P T+++++
Sbjct: 249 RIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAY 308
Query: 203 LEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVK- 261
E + M ++ + + I LL G D+A E+ E K +
Sbjct: 309 RVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRP 368
Query: 262 --IEEVVQFLCKRGKLPEARKLL 282
+ VV+ L GK+ EA +L+
Sbjct: 369 NMYKPVVERLMGAGKIDEATQLV 391
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 137/315 (43%), Gaps = 52/315 (16%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PD TFNTLI ++ G+ +A K++ M A +Y+ L+ L ++GD+
Sbjct: 486 GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSG 545
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
E + ++ K G +P SY + Q + G ER+ +I K G P S+
Sbjct: 546 ENVISDMKSK-------GFKPTETSYSLMLQCYAKGGNYLGIERIENRI-KEGQIFP-SW 596
Query: 126 M---TVIMGH--CR-----EGAY----ENGY-----------------------ELLIWM 148
M T+++ + CR E A+ ++GY E ++
Sbjct: 597 MLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILES 656
Query: 149 LRRDFL-PDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGF 207
+R D L PD+ Y+ L+D ++++ + A E L+ + KS P ++++++ +G
Sbjct: 657 IREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGL 716
Query: 208 PHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFC----VKIE 263
E+ R+ M +R IR I + G + +++E + K C + +
Sbjct: 717 MQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKND-CRPNELTFK 775
Query: 264 EVVQFLCKRGKLPEA 278
VV C+ GK EA
Sbjct: 776 MVVDGYCRAGKYSEA 790
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 154/383 (40%), Gaps = 50/383 (13%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+ T+I ++ AG DEALK+F +MK ++ +Y+ ++ L ++ ++
Sbjct: 381 GVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEM 440
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
K+ ++ G P A++ + G + RV R++ G + D +
Sbjct: 441 IKMLCDMKSN-------GCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDT 493
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ T+I + R G+ + ++ M R F V Y+ L++ +K + M
Sbjct: 494 FNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMK 553
Query: 185 KSSYLPKTSTWHSILARLLEKG------------------FPHESARVTVMMLDRNIRQN 226
+ P T T +S++ + KG FP T+++ + R
Sbjct: 554 SKGFKP-TETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRA- 611
Query: 227 INLSTKSIELLFGHGHR-------------------DKAFEIVELLYKKGFC---VKIEE 264
+ S ++ L HG++ D+A I+E + + G V
Sbjct: 612 LAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNS 671
Query: 265 VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKG 324
++ +RG+ +A ++L K+ D+ N VI G C + EA + E+ E+G
Sbjct: 672 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Query: 325 LHQELTCLNDLVTALEARGKVEE 347
+ + N V+ A G E
Sbjct: 732 IRPCIFTYNTFVSGYTAMGMFAE 754
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 125/307 (40%), Gaps = 28/307 (9%)
Query: 45 DSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKT 104
D +Y+ ++ + G Y+KA LF+ + E G P +Y I + G++
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKE-------MGPSPTLVTYNVILDVFGKMGRS 261
Query: 105 -RKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDC 162
RK VL ++ +G + D + TV+ REG E + + P Y+
Sbjct: 262 WRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNA 321
Query: 163 LIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRN 222
L+ F + A+ L++M ++S + T++ ++A + GF E+A V MM +
Sbjct: 322 LLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKG 381
Query: 223 IRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCV----KIEEVVQFLCKRGKLPEA 278
+ N T I+ G D+A ++ + + G CV V+ L K+ + E
Sbjct: 382 VMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAG-CVPNTCTYNAVLSLLGKKSRSNEM 440
Query: 279 RKLLLFSLKNHHNVDIDLCNAVILGLCE-------INRVLEAFGLCYELVEKGLHQELTC 331
K+L N + + N +L LC +NRV C G +
Sbjct: 441 IKMLCDMKSNGCSPNRATWN-TMLALCGNKGMDKFVNRVFREMKSC------GFEPDRDT 493
Query: 332 LNDLVTA 338
N L++A
Sbjct: 494 FNTLISA 500
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 89/179 (49%), Gaps = 8/179 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PD FN+++ D+A + E+++ ++ D +Y+ L+ +RG+ KA
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
E++ L + ++ +P SY + + C G ++A R+L ++ +RG + + +
Sbjct: 686 EEILKTLEKSQL-------KPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFT 738
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
Y T + G+ G + +++ M + D P+ + ++DG+ + K AM+ + K+
Sbjct: 739 YNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G SPD T+N+L+ + G +A ++ + ++ Q+ D SY+ +I+ C+RG
Sbjct: 659 EDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQ 718
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
+A ++ E+ E+ I C F + Y + G + E V+ + K + +
Sbjct: 719 EAVRMLSEMTERGIRPCIFTYNTFVSGYTAM-------GMFAEIEDVIECMAKNDCRPNE 771
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYD-CLIDGFLQK 170
L++ V+ G+CR G Y DF+ ++ +D C D +Q+
Sbjct: 772 LTFKMVVDGYCRAGKYSEAM---------DFVSKIKTFDPCFDDQSIQR 811
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/231 (18%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG-DYDKAEKL 68
D + T++H++ G ++A+ +FE MK + +Y++++ + G + K +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 69 FDELFEKEIVLCKF----------------------------GSQPLAASYKPIFQYLCE 100
DE+ K + +F G +P +Y + Q +
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 101 HGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEI 159
G +A VL+++ + D ++Y ++ + R G + ++ M ++ +P+
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 160 YDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHE 210
Y +ID + + K A++ M ++ +P T T++++L+ L +K +E
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNE 439
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 7/182 (3%)
Query: 14 FNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELF 73
FN+LI+ + D +V MK V AD +YS ++ G +KA ++F E+
Sbjct: 298 FNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMV 357
Query: 74 EKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGHC 133
K G +P A +Y + + + +KAE +L ++ + + + TVI G C
Sbjct: 358 -------KAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWC 410
Query: 134 REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTS 193
G+ ++ + M + P+++ ++ L+ G+L+ +P A E L+ M P+ S
Sbjct: 411 SNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENS 470
Query: 194 TW 195
T+
Sbjct: 471 TF 472
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 127/321 (39%), Gaps = 60/321 (18%)
Query: 2 KGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGD 61
+G+ P+ TFN L+ + C ++EA +V + M+ V D+ +Y+ + Q+G+
Sbjct: 179 EGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGE 238
Query: 62 YDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLR--------- 112
+AE E+ EK ++ K ++P + + C G+ R R +R
Sbjct: 239 TVRAE---SEVVEKMVM--KEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA 293
Query: 113 -------------QIMKRG--------------TQDPLSYMTVIMGHCREGAYENGYELL 145
++M R D ++Y TV+ G E ++
Sbjct: 294 NLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVF 353
Query: 146 IWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEK 205
M++ PD Y L G+++ +P A E LE ++ S P + ++++
Sbjct: 354 KEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTVISGWCSN 412
Query: 206 GFPHESARVTVMMLDRNIRQNINLSTKSIE-LLFGHGHRDKAFEIVELLYKKGFCVKIEE 264
G ++ RV M + NI K+ E L++G+ + + K EE
Sbjct: 413 GSMDDAMRVFNKMCKFGVSPNI----KTFETLMWGYLEVKQPW-------------KAEE 455
Query: 265 VVQFLCKRGKLPEARKLLLFS 285
V+Q + G PE LL +
Sbjct: 456 VLQMMRGCGVKPENSTFLLLA 476
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 142/344 (41%), Gaps = 36/344 (10%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D+ FN +I++ +GN+++A++ MK + +++Y+ LI+ G +++
Sbjct: 110 GTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERS 169
Query: 66 EKLFDELFEKEIV---------------LCK----------------FGSQPLAASYKPI 94
+L D + E+ V CK G +P +Y I
Sbjct: 170 SELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI 229
Query: 95 FQYLCEHGKTRKAER--VLRQIMK-RGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRR 151
+ G+T +AE V + +MK + + + V+ G+CREG +G + M
Sbjct: 230 ATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEM 289
Query: 152 DFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHES 211
++ +++ LI+GF++ E L M + + T+ +++ G+ ++
Sbjct: 290 RVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKA 349
Query: 212 ARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLY--KKGFCVKIEEVVQFL 269
A+V M+ ++ + + + + KA E++E L + V V+
Sbjct: 350 AQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGW 409
Query: 270 CKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEA 313
C G + +A ++ K + +I ++ G E+ + +A
Sbjct: 410 CSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKA 453
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 117/263 (44%), Gaps = 8/263 (3%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M+G G PD TFN L+H + S+ + +L+ M + + ++ S + +LC G
Sbjct: 935 MQGRGVL-PDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNG 993
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
D KA L+ + K L GS + I + L G+ KAE L ++ + G
Sbjct: 994 DVKKALDLWQVMESKGWNL---GSSVVQT---KIVETLISKGEIPKAEDFLTRVTRNGMM 1047
Query: 121 DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
P +Y +I G + LL ML+ +P YD +I+G L+ ++ AM+
Sbjct: 1048 AP-NYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFH 1106
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
+M++ P STW ++ + E ES R+ M+ + + I+
Sbjct: 1107 TEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVE 1166
Query: 241 GHRDKAFEIVELLYKKGFCVKIE 263
+ KA E++E++ K G+ V E
Sbjct: 1167 KNTVKASEMMEMMQKCGYEVDFE 1189
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 150/349 (42%), Gaps = 15/349 (4%)
Query: 16 TLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEK 75
LI AG + +A M + +++ + Y+++ + C+ ++ K E++ + K
Sbjct: 808 ALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRK 867
Query: 76 EIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP---LSYMTVIMGH 132
I+ C SY+ + +C ++ A L++ + G +P + Y +I
Sbjct: 868 NII-CS------VKSYREYVRKMCLEPQSLSAIS-LKEFLLLGESNPGGVIIYNMLIFYM 919
Query: 133 CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKT 192
R + ++L+ M R LPD ++ L+ G+ ++ L M+ P
Sbjct: 920 FRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNN 979
Query: 193 STWHSILARLLEKGFPHESARVTVMMLDR--NIRQNINLSTKSIELLFGHGHRDKAFEIV 250
+ ++ + L + G ++ + +M + N+ ++ + TK +E L G KA + +
Sbjct: 980 RSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSV-VQTKIVETLISKGEIPKAEDFL 1038
Query: 251 ELLYKKGFCV-KIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINR 309
+ + G + +++ L RG L A LL LKN ++VI GL N+
Sbjct: 1039 TRVTRNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQ 1098
Query: 310 VLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGL 358
+ +A E+VE GL ++ + LV +V E+ + K + GL
Sbjct: 1099 LDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGL 1147
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 153/400 (38%), Gaps = 66/400 (16%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G+ + PD N ++HS C + A E +++ D ++ ILI C GD
Sbjct: 315 GEVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDI 374
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP 122
+A E+ K G +P SY I L G + +L ++ + G
Sbjct: 375 KRAVLYLSEIMSK-------GYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLS 427
Query: 123 LS-YMTVIMGHCREGAYEN------------------------------GYELLIWMLRR 151
LS + ++ G+C+ +E G++ L L+R
Sbjct: 428 LSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKR 487
Query: 152 D---FLPDVEIYDCLIDG-FLQKDKPLLAMETLEKM-LKSSYLPKTSTWHSILARLLEKG 206
D E +D L +G +L D L A E M L S LP+ ++S++ R E G
Sbjct: 488 DNDSTFSKAEFFDDLGNGLYLHTD--LDAYEQRVNMVLDRSVLPE---FNSLIVRASEDG 542
Query: 207 FPHESARVTVMMLDRNIRQNINLSTKSIELLF-----GHGHRDKAFEIVELLYKKGFCVK 261
+ R +LD R LS +S +L H + ++E K + +
Sbjct: 543 DLQTALR----LLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLD 598
Query: 262 IEEV---VQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCE---INRVLEAFG 315
E + VQ CK+G ++ + ++ HH +D ++I C+ +N +L +G
Sbjct: 599 GETLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWG 658
Query: 316 LCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
+L DL L +G VEE + +R+
Sbjct: 659 AAQ---NDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERV 695
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 119/241 (49%), Gaps = 29/241 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + D +++ + C +G +A+K+++ MK+ ++ D +Y+ +IR + +
Sbjct: 219 GVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFG 278
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
++F E+ E+ G +P A++ I + LCE G+ R A R+L ++ KRG Q D ++
Sbjct: 279 IRVFREMRER-------GCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSIT 331
Query: 125 YMTVIMGHCREGAYENGYELLIW---MLRRDFLPDVEIYDCLID-----GFLQKDKPLLA 176
YM C E E+L M+R P ++ Y L+ GFLQ P+L
Sbjct: 332 YM------CLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQ---PVLY 382
Query: 177 METLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI--RQNINLSTKSI 234
+ + M +S P ++ +++++ L++KG + M++R + R+ L KS+
Sbjct: 383 V--WKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRRRPELVEKSL 440
Query: 235 E 235
+
Sbjct: 441 D 441
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 107/257 (41%), Gaps = 11/257 (4%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G+G +T N ++ G + + ++ M VT D SYSI + +C+ G
Sbjct: 181 GNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKP 240
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-D 121
KA KL+ E+ + + L +Y + + + RV R++ +RG + +
Sbjct: 241 WKAVKLYKEMKSRRMKLD-------VVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPN 293
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
++ T+I C +G + Y +L M +R PD Y CL F + +KP +
Sbjct: 294 VATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILSLFG 350
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
+M++S PK T+ ++ + GF V M + + I+ L G
Sbjct: 351 RMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKG 410
Query: 242 HRDKAFEIVELLYKKGF 258
D A E E + ++G
Sbjct: 411 MLDMAREYEEEMIERGL 427
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P++ +F +I + DE KV MK+ V ++Y+I I++LC+R +A
Sbjct: 217 GIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEA 276
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ L D + G +P +Y + C +A+++ + ++ RG + D
Sbjct: 277 KALLDGMLSA-------GMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSEC 329
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I C+ G +E L + ++++P I L++G L KD + + L +
Sbjct: 330 YFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNG-LAKDSKVEEAKELIGQV 388
Query: 185 KSSYLPKTSTWHSILARL 202
K + W+ + A L
Sbjct: 389 KEKFTRNVELWNEVEAAL 406
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 9/162 (5%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M D G + T+N I S C EA + + M + + ++ +YS LI C
Sbjct: 247 MMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNED 306
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
D+++A+KLF ++ G +P + Y + YLC+ G A + ++ M++
Sbjct: 307 DFEEAKKLFK-------IMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWV 359
Query: 121 DPLSYM-TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYD 161
S M +++ G ++ E E LI ++ F +VE+++
Sbjct: 360 PSFSIMKSLVNGLAKDSKVEEAKE-LIGQVKEKFTRNVELWN 400
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 129/289 (44%), Gaps = 13/289 (4%)
Query: 21 HCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLC 80
+ A LD +L+VF +++ F+++ S + L+ DY +A++++ E+ +
Sbjct: 126 YAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPK------ 179
Query: 81 KFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYE 139
+G +P +Y + + CE G + ++ ++ ++G + + S+ +I G E +
Sbjct: 180 MYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSD 239
Query: 140 NGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSIL 199
++L M R V Y+ I ++ K A L+ ML + P T T+ ++
Sbjct: 240 EVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLI 299
Query: 200 ARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF----EIVELLYK 255
+ E+ ++ +M++R + + I L G + A E +E +
Sbjct: 300 HGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWV 359
Query: 256 KGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
F + ++ +V L K K+ EA++ L+ +K +++L N V L
Sbjct: 360 PSFSI-MKSLVNGLAKDSKVEEAKE-LIGQVKEKFTRNVELWNEVEAAL 406
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 120/311 (38%), Gaps = 15/311 (4%)
Query: 45 DSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKT 104
D ++S + NL ++ + L D E L S+ AA ++ +
Sbjct: 79 DRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDL---KSERFAAHAIVLY---AQANML 132
Query: 105 RKAERVLRQIMKRGTQDPLSYMTVIMGHCREGA-YENGYELLIWMLRR-DFLPDVEIYDC 162
+ RV R + K + + ++ C Y+ + I M + PD+E Y+
Sbjct: 133 DHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNR 192
Query: 163 LIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRN 222
+I F + + + +M + P +S++ +++ + E +V MM DR
Sbjct: 193 MIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRG 252
Query: 223 IRQNINLSTKSIEL--LFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPE 277
+ NI +ST +I + L +A +++ + G V ++ C E
Sbjct: 253 V--NIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEE 310
Query: 278 ARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVT 337
A+KL + D + +I LC+ A LC E +EK + + LV
Sbjct: 311 AKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVN 370
Query: 338 ALEARGKVEEA 348
L KVEEA
Sbjct: 371 GLAKDSKVEEA 381
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T+ T+I C G+L EA K++ M + D + ++ L ++ +D+A K+
Sbjct: 213 PDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKV 272
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
F +++ K G Y+ + +LC++G+ A +V ++ +RG D L++ +
Sbjct: 273 F------YVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWAS 326
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G + Y L+ + PD+ IY LI G ++ + A E KM++
Sbjct: 327 LIYGLLVKRRVVEAYGLVEGVEN----PDISIYHGLIKGLVKIKRASEATEVFRKMIQRG 382
Query: 188 YLPKTSTWHSIL 199
P T+ +L
Sbjct: 383 CEPIMHTYLMLL 394
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 8/176 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD TFN LIH C A D+A + + MK + T D +Y+ + C+ GD+ + ++
Sbjct: 271 PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEM 330
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMT 127
+E+ E G P +Y + L + + +A V ++ + G D Y +
Sbjct: 331 LEEMREN-------GCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSS 383
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+I + G +++ E+ M + DV +Y+ +I L + +A+ L++M
Sbjct: 384 LIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRM 439
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 148/345 (42%), Gaps = 22/345 (6%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENM-KNFQVTADSASYSILIRNLCQRGDYDKAEKLFDE 71
T + ++ +G ++A+ F M K++ V D+ + + L+ L + + A ++F +
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK 264
Query: 72 LFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK--RGTQDPLSYMTVI 129
LF+ +P A ++ + C+ K A R + +MK T D ++Y + +
Sbjct: 265 LFD--------TIKPDARTFNILIHGFCKARKFDDA-RAMMDLMKVTEFTPDVVTYTSFV 315
Query: 130 MGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
+C+EG + E+L M P+V Y ++ + + A+ EKM + +
Sbjct: 316 EAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCV 375
Query: 190 PKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEI 249
P + S++ L + G ++A + M ++ +R+++ + I H + A +
Sbjct: 376 PDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRL 435
Query: 250 VELLYKK--GFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHH----NVDIDLCNAVIL- 302
++ + + C E L K + KLL L HH +V ID+ ++L
Sbjct: 436 LKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILL--HHMVKNDVSIDVSTYILLI 493
Query: 303 -GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVE 346
GLC +V EA E V KG+ + LV LE + E
Sbjct: 494 RGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKNMAE 538
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 146/342 (42%), Gaps = 22/342 (6%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M+GD + +T ++ AG +EA+ +F+ + F + ++ S ++L+ LC+
Sbjct: 147 MRGDKLVTLNTVA--KIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEK 204
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQ--PLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
++A +VL + S P A ++ C+ + +A ++++ G
Sbjct: 205 RVEQA----------RVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHG 254
Query: 119 TQD-PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAM 177
+ +SY T+I +C++ + YE+L M P+ Y ++ + + A+
Sbjct: 255 FRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEAL 314
Query: 178 ETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARV-TVMMLDRNIRQNINLSTKSIEL 236
+M +S P + ++ ++ L G E+ RV V M + + N + I +
Sbjct: 315 RVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAM 374
Query: 237 LFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLC----KRGKLPEARKLLLFSLKNHH-N 291
H DKA E+++ + C Q L KRG + E KLL + HH +
Sbjct: 375 YCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLS 434
Query: 292 VDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLH-QELTCL 332
+D +I LC N A+ L E++ + + + TCL
Sbjct: 435 LDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCL 476
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 10/211 (4%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G P++ T+ T++ S + +EAL+V MK DS Y+ LI L + G ++
Sbjct: 288 NGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEE 347
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP-- 122
AE++F + + + G ++Y + C H + KA +L+++ +P
Sbjct: 348 AERVF------RVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDV 401
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLP-DVEIYDCLIDGFLQKDKPLLAMETLE 181
+Y ++ + G +LL M+ + L D Y LI + + A E
Sbjct: 402 HTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFE 461
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESA 212
+M+ P+ T +L + +K HESA
Sbjct: 462 EMISQDITPRHRTCLLLLEEVKKKNM-HESA 491
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 146/342 (42%), Gaps = 22/342 (6%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M+GD + +T ++ AG +EA+ +F+ + F + ++ S ++L+ LC+
Sbjct: 147 MRGDKLVTLNTVA--KIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEK 204
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQ--PLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
++A +VL + S P A ++ C+ + +A ++++ G
Sbjct: 205 RVEQA----------RVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHG 254
Query: 119 TQD-PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAM 177
+ +SY T+I +C++ + YE+L M P+ Y ++ + + A+
Sbjct: 255 FRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEAL 314
Query: 178 ETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARV-TVMMLDRNIRQNINLSTKSIEL 236
+M +S P + ++ ++ L G E+ RV V M + + N + I +
Sbjct: 315 RVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAM 374
Query: 237 LFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLC----KRGKLPEARKLLLFSLKNHH-N 291
H DKA E+++ + C Q L KRG + E KLL + HH +
Sbjct: 375 YCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLS 434
Query: 292 VDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLH-QELTCL 332
+D +I LC N A+ L E++ + + + TCL
Sbjct: 435 LDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCL 476
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 10/211 (4%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G P++ T+ T++ S + +EAL+V MK DS Y+ LI L + G ++
Sbjct: 288 NGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEE 347
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP-- 122
AE++F + + + G ++Y + C H + KA +L+++ +P
Sbjct: 348 AERVF------RVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDV 401
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLP-DVEIYDCLIDGFLQKDKPLLAMETLE 181
+Y ++ + G +LL M+ + L D Y LI + + A E
Sbjct: 402 HTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFE 461
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESA 212
+M+ P+ T +L + +K HESA
Sbjct: 462 EMISQDITPRHRTCLLLLEEVKKKNM-HESA 491
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 128/284 (45%), Gaps = 10/284 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G DT T+N L+ + G +A +++E+M+ D ++Y ++I +L + G D
Sbjct: 271 ESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLD 330
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
A KLF ++ E+++ +P + + + + + G+ + +V ++ G +
Sbjct: 331 AAFKLFQQMKERKL-------RPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSA 383
Query: 124 S-YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+ ++++I + + G + L M + F P+ +Y +I+ + K +AM +
Sbjct: 384 TMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKD 443
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M K+ +LP ST+ +L G + ++ M + +R ++ + LL
Sbjct: 444 MEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRL 503
Query: 243 RDKAFEIVELLYKKGFCVKI--EEVVQFLCKRGKLPEARKLLLF 284
D A +I+ + G+ V + +V+ K + A K L F
Sbjct: 504 VDVAGKILLEMKAMGYSVDVCASDVLMIYIKDASVDLALKWLRF 547
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 112/248 (45%), Gaps = 9/248 (3%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
T N L+ S A EA +F+ +K + T + +Y++L+ C+ + +A ++++++
Sbjct: 266 TINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 324
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYMTVIMG 131
++ G +P ++ + + L K A ++ + +G + SY +I
Sbjct: 325 IDQ-------GLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 377
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
C++ + E E M+ PD +Y CLI GF + K E L++M + + P
Sbjct: 378 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPD 437
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVE 251
T+++++ + + P + R+ M+ I +I+ ++ F + + + E
Sbjct: 438 GKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWE 497
Query: 252 LLYKKGFC 259
+ KKG C
Sbjct: 498 EMIKKGIC 505
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 98/222 (44%), Gaps = 8/222 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD N ++ + +A+K+F MK+ + SY+I+IR+ C++ +
Sbjct: 326 DQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSME 385
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A + FD++ + G QP AA Y + K +L+++ ++G D
Sbjct: 386 TAIEYFDDMVDS-------GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG 438
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y +I + E+ + M++ + P + ++ ++ + + E+
Sbjct: 439 KTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEE 498
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIR 224
M+K P +++ ++ L+ +G E+ R MLD+ ++
Sbjct: 499 MIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMK 540
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 128/286 (44%), Gaps = 19/286 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + TF LI + C G +D A ++ M V D YS L+ ++C+ D
Sbjct: 174 GVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKD---- 229
Query: 66 EKLFDEL-FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM-KRGTQDPL 123
FD + + +++ +F P Y + ++L E G+ ++ VL Q+ R D +
Sbjct: 230 SSCFDVIGYLEDLRKTRFS--PGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLV 287
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
Y V+ G + Y +L +L PDV Y+ I+G +++ A++ + M
Sbjct: 288 CYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSM 347
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN-------INLSTKSIEL 236
K P T++ ++ L++ G + + M + +N I+ + E+
Sbjct: 348 NKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEV 407
Query: 237 LFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLL 282
+ HG ++AF + + K +IEEV+ LC++G + +A +LL
Sbjct: 408 VCAHGLLEEAFNM-NVFVKSS---RIEEVISRLCEKGLMDQAVELL 449
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 7/171 (4%)
Query: 25 GNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGS 84
GN ++V MK V AD +YS ++ G +KA ++F E+ K G
Sbjct: 334 GNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMV-------KAGV 386
Query: 85 QPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGHCREGAYENGYEL 144
+P A +Y + + + +KAE +L ++ + + + TVI G C G+ ++ +
Sbjct: 387 KPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRV 446
Query: 145 LIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTW 195
M + P+++ ++ L+ G+L+ +P A E L+ M P+ ST+
Sbjct: 447 FNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 497
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 140/311 (45%), Gaps = 31/311 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENM---KNFQVTADSASYSILIRNLCQRGDY 62
G +P T T+NTLI + AG + + ++ + M N V + ++++L++ C++
Sbjct: 145 GLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKV 204
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAER--VLRQIMK-RGT 119
++A ++ ++ E C G +P +Y I + G+T +AE V + +MK +
Sbjct: 205 EEAWEVVKKMEE-----C--GVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAK 257
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQ-KDKPLLAME 178
+ + V+ G+CREG +G + M ++ +++ LI+GF++ D+ +
Sbjct: 258 PNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEV 317
Query: 179 TLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
TL +L S + G +V +M + N++ ++ + +
Sbjct: 318 TLTLLL-----------MSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWS 366
Query: 239 GHGHRDKAFEIVELLYKKGFCVKIE-EVVQFLCK---RGKLPEARKLLLFSLKNHHNVDI 294
G+ +KA ++ + + K G VK + L K R K P+ + LL +L ++
Sbjct: 367 SAGYMEKAAQVFKEMVKAG--VKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNV 424
Query: 295 DLCNAVILGLC 305
+ VI G C
Sbjct: 425 VIFTTVISGWC 435
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 126/329 (38%), Gaps = 51/329 (15%)
Query: 2 KGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGD 61
+G+ P+ TFN L+ + C ++EA +V + M+ V D+ +Y+ + Q+G+
Sbjct: 179 EGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGE 238
Query: 62 YDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLR--------- 112
+AE E+ EK ++ K ++P + + C G+ R R +R
Sbjct: 239 TVRAE---SEVVEKMVM--KEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA 293
Query: 113 -------------QIMKRGTQDPLSYMTVIMGHCRE----GAYENGYELLIWMLRRDFLP 155
++M R D ++ ++M E G + ++L M +
Sbjct: 294 NLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKA 353
Query: 156 DVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVT 215
DV Y +++ + A + ++M+K+ P +SILA+ + + A
Sbjct: 354 DVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHA-YSILAKGYVRAKEPKKAEEL 412
Query: 216 VMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKI------------- 262
+ L R N+ + T I +G D A + + K G I
Sbjct: 413 LETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEV 472
Query: 263 ------EEVVQFLCKRGKLPEARKLLLFS 285
EEV+Q + G PE LL +
Sbjct: 473 KQPWKAEEVLQMMRGCGVKPENSTFLLLA 501
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SPD TF+TLI+ +C A +D +++F M + A++ +Y+ LI CQ GD D A
Sbjct: 40 GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 99
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK 116
+ L +E+ G P ++ + LC + RKA +L + K
Sbjct: 100 QDLLNEMI-------SCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 143
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Query: 86 PLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYEL 144
P +Y + C+ + A+R+L + +G + D +++ T+I G+C+ +NG E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 145 LIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLE 204
M RR + + Y LI GF Q A + L +M+ P T+H +LA L
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 205 K 205
K
Sbjct: 128 K 128
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 8/151 (5%)
Query: 37 MKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQ 96
M + + + +Y+ +I C++ D A+++ D + K G P ++ +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASK-------GCSPDVVTFSTLIN 53
Query: 97 YLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLP 155
C+ + + ++ +RG + ++Y T+I G C+ G + +LL M+ P
Sbjct: 54 GYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAP 113
Query: 156 DVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
D + C++ G K + A LE + KS
Sbjct: 114 DYITFHCMLAGLCSKKELRKAFAILEDLQKS 144
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P T T+N++I C +D+A ++ ++M + + D ++S LI C+ D ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
F E+ + IV +Y + C+ G A+ +L +++ G D +++
Sbjct: 68 FCEMHRRGIV-------ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 128 VIMGHCREGAYENGYELL 145
++ G C + + +L
Sbjct: 121 MLAGLCSKKELRKAFAIL 138
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 141/356 (39%), Gaps = 42/356 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQR------ 59
G SPDT T+N L+ H AG+++ AL+ + ++ + D+ ++ ++ LCQR
Sbjct: 370 GISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEV 429
Query: 60 ----GDYDKAEKLFDE---------------------LFEKEIVLCKFGSQPLAASYKPI 94
+ D+ DE LFE+ + C S LAA +
Sbjct: 430 EAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAA----V 485
Query: 95 FQYLCEHGKTRKAERVL--RQIMKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRD 152
E G +AE V ++ M D L Y +I + + +E L M +
Sbjct: 486 IDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQG 545
Query: 153 FLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESA 212
PD Y+ L D A L +ML S P T+ +++A + G ++
Sbjct: 546 TWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAV 605
Query: 213 RVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFC---VKIEEVVQFL 269
+ M ++ N + I G ++A + ++ + G + + +++
Sbjct: 606 DLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAY 665
Query: 270 CKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLC-EINRVLEAFGLCYELVEKG 324
K G L EAR++ + D+ N+ +L LC ++ V EA + L EKG
Sbjct: 666 SKVGCLEEARRVYDKMKDSEGGPDVAASNS-MLSLCADLGIVSEAESIFNALREKG 720
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/379 (19%), Positives = 130/379 (34%), Gaps = 75/379 (19%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G DT TFNT+IH+ + G+L EA + + M+ ++ D+ +Y+IL+ GD + A
Sbjct: 335 GVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAA 394
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ + ++ K G P +++ + LC+ + E V+ ++ + + D S
Sbjct: 395 LEYYRKIR-------KVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHS 447
Query: 125 YMTVIMGHCREGAYENGYELL-------------------------IWMLRRDFL----- 154
++ + EG L +W+
Sbjct: 448 VPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRN 507
Query: 155 -----PDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPH 209
DV Y+ +I + + A+ + M P T++S+ L
Sbjct: 508 MSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVD 567
Query: 210 ESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFL 269
E+ R+ MLD + I G A ++ E + K G VK EVV
Sbjct: 568 EAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTG--VKPNEVVY-- 623
Query: 270 CKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQEL 329
++I G E V EA + E G+
Sbjct: 624 ----------------------------GSLINGFAESGMVEEAIQYFRMMEEHGVQSNH 655
Query: 330 TCLNDLVTALEARGKVEEA 348
L L+ A G +EEA
Sbjct: 656 IVLTSLIKAYSKVGCLEEA 674
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 133/346 (38%), Gaps = 19/346 (5%)
Query: 11 TCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFD 70
T TFNTLI + AG L++A +F M V D+ +++ +I G +AE L
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 71 ELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYMTVI 129
++ EK G P +Y + + G A R+I K G D +++ V+
Sbjct: 365 KMEEK-------GISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVL 417
Query: 130 MGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
C+ ++ M R D ++ ++ + + A E+ L
Sbjct: 418 HILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVL 477
Query: 190 PKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH---RDKA 246
T T +++ EKG E+ TV RN+ N + ++ +G +KA
Sbjct: 478 SST-TLAAVIDVYAEKGLWVEAE--TVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKA 534
Query: 247 FEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
+ + + +G + Q L + EA+++L L + A+I
Sbjct: 535 LSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIAS 594
Query: 304 LCEINRVLEAFGLCYELVEK-GLHQELTCLNDLVTALEARGKVEEA 348
+ + +A L YE +EK G+ L+ G VEEA
Sbjct: 595 YVRLGLLSDAVDL-YEAMEKTGVKPNEVVYGSLINGFAESGMVEEA 639
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 95/202 (47%), Gaps = 7/202 (3%)
Query: 14 FNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELF 73
++TLI S+ A + A++ FE M + + S++ L+ ++DK +LFDE+
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 74 EKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGH 132
++ + P SY + + C+ G KA ++RQ+ +G + +++ T++
Sbjct: 165 QRYNKII-----PDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSL 219
Query: 133 CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKT 192
++G E L M+++ D Y+ I QK+ P E +E+M P T
Sbjct: 220 YKKGELEVADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGLKPDT 278
Query: 193 STWHSILARLLEKGFPHESARV 214
+++ ++ E+G E+ +V
Sbjct: 279 ISYNYLMTAYCERGMLDEAKKV 300
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENM--KNFQVTADSASYSILIRNLCQRGDYD 63
G +FN L+++ + N D+ ++F+ + + ++ D SY ILI++ C G +
Sbjct: 132 GTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPE 191
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
KA ++ ++ K G + ++ I L + G+ A+ + +++K+G + D
Sbjct: 192 KAIEIMRQMQGK-------GMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDN 244
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y IM +E E EL+ M PD Y+ L+ + ++ A + E
Sbjct: 245 AAYNVRIMSAQKESP-ERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEG 303
Query: 183 MLKSSYLPKTSTWHSIL-----ARLLEKGF 207
+ ++ P +T+ +++ +RL E+G+
Sbjct: 304 LEGNNCAPNAATFRTLIFHLCYSRLYEQGY 333
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 7/112 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PDT ++N L+ ++C G LDEA KV+E ++ ++A++ LI +LC Y++
Sbjct: 273 GLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQG 332
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKR 117
+F+K + + K P + K + L E+ K A+ ++R + K+
Sbjct: 333 Y----AIFKKSVYMHKI---PDFNTLKHLVVGLVENKKRDDAKGLIRTVKKK 377
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 99/222 (44%), Gaps = 8/222 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD N ++ + +A+K+F MK+ + SY+I+IR+ C++ +
Sbjct: 325 DHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSME 384
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A + FD++ + G QP AA Y + K +L+++ ++G D
Sbjct: 385 TAIEYFDDMVDS-------GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG 437
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y +I + E+G + M++ + P + ++ ++ + + ++
Sbjct: 438 KTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDE 497
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIR 224
M+K P +++ ++ L+ +G E+ R MLD+ ++
Sbjct: 498 MIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMK 539
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 110/248 (44%), Gaps = 9/248 (3%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
T N L+ S A EA +F+ +K + T + +Y++L+ C+ + +A ++++++
Sbjct: 265 TINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 323
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYMTVIMG 131
+ G +P ++ + + L K A ++ + +G + SY +I
Sbjct: 324 IDH-------GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 376
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
C++ + E E M+ PD +Y CLI GF + K E L++M + + P
Sbjct: 377 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPD 436
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVE 251
T+++++ + + P R+ M+ I +I+ ++ F + + + +
Sbjct: 437 GKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWD 496
Query: 252 LLYKKGFC 259
+ KKG C
Sbjct: 497 EMIKKGIC 504
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 99/222 (44%), Gaps = 8/222 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD N ++ + +A+K+F MK+ + SY+I+IR+ C++ +
Sbjct: 326 DHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSME 385
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A + FD++ + G QP AA Y + K +L+++ ++G D
Sbjct: 386 TAIEYFDDMVDS-------GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG 438
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y +I + E+G + M++ + P + ++ ++ + + ++
Sbjct: 439 KTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDE 498
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIR 224
M+K P +++ ++ L+ +G E+ R MLD+ ++
Sbjct: 499 MIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMK 540
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 110/248 (44%), Gaps = 9/248 (3%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
T N L+ S A EA +F+ +K + T + +Y++L+ C+ + +A ++++++
Sbjct: 266 TINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 324
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYMTVIMG 131
+ G +P ++ + + L K A ++ + +G + SY +I
Sbjct: 325 IDH-------GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 377
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
C++ + E E M+ PD +Y CLI GF + K E L++M + + P
Sbjct: 378 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPD 437
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVE 251
T+++++ + + P R+ M+ I +I+ ++ F + + + +
Sbjct: 438 GKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWD 497
Query: 252 LLYKKGFC 259
+ KKG C
Sbjct: 498 EMIKKGIC 505
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/372 (20%), Positives = 151/372 (40%), Gaps = 18/372 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P + + +LIH++ ++DEAL MK + +YS+++ + G + A
Sbjct: 339 GITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAA 398
Query: 66 EKLFDELFEKEIVLCKFGSQPLAAS-YKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS 124
+ FDE K + L AS Y I C+ +AE ++R++ + G P++
Sbjct: 399 DYWFDE--------AKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIA 450
Query: 125 -YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
Y T++ G+ + G + + F P V Y CLI+ + + K A+E M
Sbjct: 451 IYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVM 510
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ T+ ++ ++ + V M+ ++ ++ L I G G+
Sbjct: 511 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNM 570
Query: 244 DKAFEIVELLYK---KGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNV--DIDLCN 298
D+A + V+ + K + ++ K G + R L +F + + N
Sbjct: 571 DRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDM--RRSLEVFDMMRRCGCVPTVHTFN 628
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGL 358
+I GL E ++ +A + E+ G+ ++ + G +A R+
Sbjct: 629 GLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQN- 687
Query: 359 ENLDRSVLSYSS 370
E LD + +Y +
Sbjct: 688 EGLDVDIFTYEA 699
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/332 (19%), Positives = 138/332 (41%), Gaps = 21/332 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD +N +I + C GN+D A++ + M+ + + ++ +I + GD ++
Sbjct: 549 GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRS 608
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
++FD ++ + G P ++ + L E + KA +L ++ G + + +
Sbjct: 609 LEVFD-------MMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHT 661
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ G+ G +E + D+ Y+ L+ + + A+ + K +
Sbjct: 662 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL-AVTKEM 720
Query: 185 KSSYLPKTSTWHSILAR-LLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ +P+ S ++IL +G E+A + M ++ +I+ T I G
Sbjct: 721 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDM 780
Query: 244 DKAFEIVELLYKKGFCVKIEEVVQFL--CKRGKLPEARKLLLFSLKNHHNVDID--LCNA 299
++A + +E + G I+ + R LPE + L + + D + +
Sbjct: 781 NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPE-KALSCYEEMKAMGIKPDKAVYHC 839
Query: 300 VILGLCEINRVLEAF------GLCYELVEKGL 325
++ L + EA+ +C E+VE GL
Sbjct: 840 LLTSLLSRASIAEAYIYSGVMTICKEMVEAGL 871
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/350 (18%), Positives = 128/350 (36%), Gaps = 17/350 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P F ++ + G++ A + FE M+ +T S Y+ LI D D+A
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK-RGTQDPLSYMT 127
++ E+ I + +Y I + G A+ + + T + Y
Sbjct: 367 VRKMKEEGIEMS-------LVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGK 419
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I HC+ E L+ M + IY ++DG+ + +++ +
Sbjct: 420 IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECG 479
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
+ P T+ ++ + G ++ V+ +M + ++ N+ + I AF
Sbjct: 480 FTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAF 539
Query: 248 EIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
+ E + K+G + ++ C G + A + + K H +I G
Sbjct: 540 AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGY 599
Query: 305 C---EINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
++ R LE F + G + N L+ L + ++E+A I
Sbjct: 600 AKSGDMRRSLEVFDMMRRC---GCVPTVHTFNGLINGLVEKRQMEKAVEI 646
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 115/255 (45%), Gaps = 10/255 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G P++ F+ L+ G + +V + MK+ V D Y+++I + D
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 462
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQD-PL 123
A FD + + G +P ++ + C+HG+ AE + + +RG
Sbjct: 463 AMTTFDRMLSE-------GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCAT 515
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y +I + + +++ LL M + LP+V + L+D + + + A+E LE+M
Sbjct: 516 TYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEM 575
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
P ++ +++++ ++G ++ +M ++ ++ L+ S+ FG R
Sbjct: 576 KSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSL-LALNSLINAFGEDRR 634
Query: 244 D-KAFEIVELLYKKG 257
D +AF +++ + + G
Sbjct: 635 DAEAFAVLQYMKENG 649
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/339 (20%), Positives = 135/339 (39%), Gaps = 11/339 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G P T +N L+ + G L +A + M+ V+ D +YS+LI G ++
Sbjct: 333 SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWES 392
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPL 123
A + E+ ++ QP + + + + G+ +K +VL+++ G + D
Sbjct: 393 ARIVLKEMEAGDV-------QPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQ 445
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
Y VI + ++ ML PD ++ LID + + ++A E E M
Sbjct: 446 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 505
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ LP +T++ ++ ++ + R+ M + I N+ T +++ G
Sbjct: 506 ERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRF 565
Query: 244 DKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
+ A E +E + G ++ +RG +A + + N++
Sbjct: 566 NDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSL 625
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
I E R EAF + + E G+ ++ L+ AL
Sbjct: 626 INAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKAL 664
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 84/200 (42%), Gaps = 10/200 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+NTLI HC G A ++FE M+ + +Y+I+I + + +D
Sbjct: 474 GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDM 533
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS- 124
++L ++ + I+ P ++ + + G+ A L ++ G + P S
Sbjct: 534 KRLLGKMKSQGIL-------PNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLK-PSST 585
Query: 125 -YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
Y +I + + G E M P + + LI+ F + + A L+ M
Sbjct: 586 MYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYM 645
Query: 184 LKSSYLPKTSTWHSILARLL 203
++ P T+ +++ L+
Sbjct: 646 KENGVKPDVVTYTTLMKALI 665
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 91/209 (43%), Gaps = 11/209 (5%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEA--LKVFENMKNFQVTADSASYSILIRNLCQ 58
M+ DG + D ++ +I S + +D L++++ ++ ++ D + +I +
Sbjct: 223 MRQDG-YQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAK 281
Query: 59 RGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
GD KA +L + G A+ I L + G+T +AE + ++ + G
Sbjct: 282 SGDPSKALQLLG-------MAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSG 334
Query: 119 TQD-PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAM 177
+ +Y ++ G+ + G ++ ++ M +R PD Y LID ++ + A
Sbjct: 335 IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESAR 394
Query: 178 ETLEKMLKSSYLPKTSTWHSILARLLEKG 206
L++M P + + +LA ++G
Sbjct: 395 IVLKEMEAGDVQPNSFVFSRLLAGFRDRG 423
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 112/238 (47%), Gaps = 10/238 (4%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
MKG G PD T+N+LI +C +++A K+ + M+ + T D +Y+ +I L G
Sbjct: 237 MKGKG-LKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIG 295
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-T 119
DKA ++ E+ E +G P A+Y + C + A++++ +++K+G +
Sbjct: 296 QPDKAREVLKEMKE-------YGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLS 348
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
+ +Y +EL + ML + LP+ + LI F + +K +AM
Sbjct: 349 PNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRL 408
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELL 237
E M+ + + +L L + E+ + + M+++ R + N+S K I+LL
Sbjct: 409 WEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPS-NVSFKRIKLL 465
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 102/250 (40%), Gaps = 12/250 (4%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
DT FN L+ + C ++ +A V+ ++K+ Q D +++IL+ K
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLKH-QFQPDLQTFNILL----------SGWKSS 227
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM-KRGTQDPLSYMTV 128
+E + G +P +Y + C+ + KA +++ ++ + T D ++Y TV
Sbjct: 228 EEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTV 287
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
I G G + E+L M PDV Y+ I F + A + +++M+K
Sbjct: 288 IGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGL 347
Query: 189 LPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFE 248
P +T++ L S + V ML N I++ H D A
Sbjct: 348 SPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMR 407
Query: 249 IVELLYKKGF 258
+ E + KGF
Sbjct: 408 LWEDMVVKGF 417
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 77/189 (40%), Gaps = 28/189 (14%)
Query: 11 TCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFD 70
T + L+ G + EAL F MK + D +Y+ +I LC+ G++ KA L D
Sbjct: 165 TASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLD 224
Query: 71 ELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIM 130
++ L F P +Y + C +G + +R+ M +
Sbjct: 225 QM-----QLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANR---------- 269
Query: 131 GHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLP 190
+ ML R F+PDV Y+CLIDG + ++ A+E E M +P
Sbjct: 270 -------------MFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVP 316
Query: 191 KTSTWHSIL 199
T++S +
Sbjct: 317 NQVTYNSFI 325
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMK--NFQVTADSASYSILIRNLCQRGDYDKAE 66
PD +NT+I++ C GN +A + + M+ F+ D+ +Y+ILI +
Sbjct: 198 PDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISS----------- 246
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSY 125
C++G Q K I + + E A R+ R+++ RG D ++Y
Sbjct: 247 ------------YCRYGMQ--TGCRKAIRRRMWE------ANRMFREMLFRGFVPDVVTY 286
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+I G C+ EL M + +P+ Y+ I + ++ A+E + M K
Sbjct: 287 NCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKK 346
Query: 186 SSY-LPKTSTWHSILARLLEKGFPHESARVTVMMLD 220
+ +P +ST+ ++ L+E E+ + V M++
Sbjct: 347 LGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVE 382
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 137/326 (42%), Gaps = 28/326 (8%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G PD T+N+LI L+ L++F+ M + ++ D SY+ L+ + G +
Sbjct: 76 EAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHG 135
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
+A K+ E +I L G P +Y + LC+ G T A + + + R + +
Sbjct: 136 EAFKILHE----DIHLA--GLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELM 189
Query: 124 SYMTVIMGHC---REGAYENGYELLIWMLRR----DFLPDVEIYDCLIDGFLQKDKPLLA 176
+Y +I G C R G+ + WM+R + P+ Y ++ + + +
Sbjct: 190 TYNILINGLCKSRRVGSVD-------WMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKG 242
Query: 177 METLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIR-QNINLSTKSIE 235
++ KM K Y ++++ L++ G E+ ++ R Q+I +
Sbjct: 243 LQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLN 302
Query: 236 LLFGHGHRDKAFEIVELLYKKGFCVKIEE-----VVQFLCKRGKLPEARKLLLFSLKNHH 290
L F G+ D +++E + KG +K ++ +V L G A K L +
Sbjct: 303 LYFKDGNLDAVDDLLEEIEMKG--LKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGM 360
Query: 291 NVDIDLCNAVILGLCEINRVLEAFGL 316
+ CN +I GLC+ V A L
Sbjct: 361 QPSVVTCNCLIDGLCKAGHVDRAMRL 386
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 15/283 (5%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G P T+N L+ + C +G+ D A+++F+++K+ +V + +Y+ILI LC+
Sbjct: 148 AGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGS 206
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPL 123
+ + EL K G P A +Y + + + + K ++ ++ K G T D
Sbjct: 207 VDWMMRELK-------KSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGF 259
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLP-DVEIYDCLIDGFLQKDKPLLAMETLEK 182
+ V+ + G E YE + ++R D+ Y+ L++ + KD L A++ L +
Sbjct: 260 ANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYF-KDGNLDAVDDLLE 318
Query: 183 MLKSSYLPKTSTWHSILAR-LLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
++ L H+I+ LL G + + + + ++ ++ I+ L G
Sbjct: 319 EIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAG 378
Query: 242 HRDKAFEI-VELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLL 283
H D+A + + + F VV LCK G+L A KLLL
Sbjct: 379 HVDRAMRLFASMEVRDEF--TYTSVVHNLCKDGRLVCASKLLL 419
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMK-NFQVTADSASYSILIRNLCQRGDY 62
D G PD N L+ + + ++++AL++F M + +S +Y LI LC +G
Sbjct: 281 DSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRT 340
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQD 121
A +L E+ K V P SY + G+ A + L ++++ G D
Sbjct: 341 INARELLSEMKGKGFV-------PNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVD 393
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKD 171
+SY T++ CR+G Y+ LL MLR L D + YD L++ L KD
Sbjct: 394 FISYRTLVDESCRKGKYDEATRLL-EMLREKQLVDRDSYDKLVN-VLHKD 441
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALK-VFENMKNFQVTADSASYSILIRNLCQR 59
MKG G F P+ ++N+L+++ +G +D+A+K ++E ++N +V D SY L+ C++
Sbjct: 350 MKGKG-FVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRV-VDFISYRTLVDESCRK 407
Query: 60 GDYDKAEKLFDELFEKEIV 78
G YD+A +L + L EK++V
Sbjct: 408 GKYDEATRLLEMLREKQLV 426
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 113/254 (44%), Gaps = 13/254 (5%)
Query: 7 FSPDTCTFNTLIHSHCSAG-NLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
F D FN +++ C+ ++ EA +++ M N+ +T + SYS +I + G+ +
Sbjct: 254 FPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDS 313
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+L+DE+ ++ G P Y + L +A ++++++ + G + D ++
Sbjct: 314 LRLYDEMKKR-------GLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVT 366
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I C G + +L M+ + P V+ + FL+ +E L +M
Sbjct: 367 YNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFH----AFLEAVNFEKTLEVLGQMK 422
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
S P T+ IL +L + P + ++ M I N L +I+ L G +
Sbjct: 423 ISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLE 482
Query: 245 KAFEIVELLYKKGF 258
KA EI + KGF
Sbjct: 483 KAREIYSEMKSKGF 496
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 117/293 (39%), Gaps = 54/293 (18%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMK------NFQVTADSASYSILIR 54
+KG F DT ++N IH G+LD AL +F+ MK D +Y+ LI
Sbjct: 238 LKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIH 297
Query: 55 NLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI 114
LC G A ++DEL G +P ++Y+ + Q C+ + A R+ ++
Sbjct: 298 VLCLFGKAKDALIVWDELKVS-------GHEPDNSTYRILIQGCCKSYRMDDAMRIYGEM 350
Query: 115 MKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPL 174
G F+PD +Y+CL+DG L+ K
Sbjct: 351 QYNG----------------------------------FVPDTIVYNCLLDGTLKARKVT 376
Query: 175 LAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSI 234
A + EKM++ T++ ++ L G A T+ + Q ++ T SI
Sbjct: 377 EACQLFEKMVQEGVRASCWTYNILIDGLFRNG--RAEAGFTLFCDLKKKGQFVDAITFSI 434
Query: 235 E--LLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLC---KRGKLPEARKLL 282
L G + A ++VE + +GF V + + L K+G+ KL+
Sbjct: 435 VGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLM 487
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/406 (19%), Positives = 165/406 (40%), Gaps = 60/406 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PDT +N L+ A + EA ++FE M V A +Y+ILI L + G +
Sbjct: 354 GFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAG 413
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
LF +L +K G A ++ + LC GK A +++ ++ RG + D ++
Sbjct: 414 FTLFCDLKKK-------GQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVT 466
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQ----KDKPLLAMETL 180
++++G ++G ++ +L+ + + +P+V ++ ++ L+ KDK M
Sbjct: 467 ISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPM--- 523
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVM---------MLDRNIRQ------ 225
P ++ I++ + + + V+ M +D+ Q
Sbjct: 524 --------FPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKP 575
Query: 226 -----------------NINLSTKSIELLFGHGHRDKAFEIVELLYKKGFC----VKIEE 264
++++ + + G A ++ E+ G
Sbjct: 576 LFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNS 635
Query: 265 VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKG 324
++ K+G AR +L +N DI N +I GL ++ R A + L ++G
Sbjct: 636 MMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQG 695
Query: 325 LHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYSS 370
+ ++ N L+ AL +++EA + + ++ V+SY++
Sbjct: 696 GYLDIVMYNTLINALGKATRLDEATQLFDHMKS-NGINPDVVSYNT 740
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 95/223 (42%), Gaps = 35/223 (15%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
F PD CT+N+LIH C G +AL V++ +K D+++Y ILI+ C+ D A
Sbjct: 285 FGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAM 344
Query: 67 KLFDE-------------------------------LFEKEIVLCKFGSQPLAASYKPIF 95
+++ E LFEK + + G + +Y +
Sbjct: 345 RIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEK---MVQEGVRASCWTYNILI 401
Query: 96 QYLCEHGKTRKAERVLRQIMKRGT-QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
L +G+ + + K+G D +++ V + CREG E +L+ M R F
Sbjct: 402 DGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFS 461
Query: 155 PDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHS 197
D+ L+ GF ++ + + ++ + + + +P W++
Sbjct: 462 VDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNA 504
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 13/226 (5%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTA-DSASYSILIRNLCQRGDYDKAE 66
S D NT + + S G+L A K+FE VT S +Y+ ++ + ++G + A
Sbjct: 591 SFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTAR 650
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSY 125
+ D++FE F + +A +Y I Q L + G+ A VL ++ K+G D + Y
Sbjct: 651 GVLDQMFEN------FCAADIA-TYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMY 703
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
T+I + + +L M PDV Y+ +I+ + K A + L+ ML
Sbjct: 704 NTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLD 763
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLST 231
+ LP T +IL L G E AR RN N N+S+
Sbjct: 764 AGCLPNHVT-DTILDYL---GKEMEKARFKKASFVRNKPNNNNISS 805
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 21/191 (10%)
Query: 31 LKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAAS 90
+++F M + ++ +Y+ LI+ L Q GD D A+++F E+ G P +
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSD-------GVPPDIMT 53
Query: 91 YKPIFQYLCEHGKTRKA----------ERVLRQIMKRGTQDPLSYMTVIMGHCREGAYEN 140
Y + LC++GK KA + +K + ++Y T+I G C++G E
Sbjct: 54 YNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEE 113
Query: 141 GYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILA 200
Y L M LPD Y+ LI L+ + E +++M + ST+ +
Sbjct: 114 AYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Query: 201 RL----LEKGF 207
L L+KGF
Sbjct: 174 MLHDGRLDKGF 184
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +T T+ TLI AG+ D A ++F+ M + V D +Y+IL+ LC+ G +KA
Sbjct: 11 GLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKA 70
Query: 66 EKLFDELFEKEIVLCKF---GSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QD 121
+ ++ + + C G +P +Y + C+ G +A + R++ + G D
Sbjct: 71 -LVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPD 129
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIY----DCLIDGFLQK 170
+Y T+I H R+G EL+ M F D Y D L DG L K
Sbjct: 130 SGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDK 182
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 122/280 (43%), Gaps = 11/280 (3%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G+ G D +++++I + G+L++ LK+F+ MK + D Y+ ++ L +
Sbjct: 294 GNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFV 353
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP 122
+A L + E++ G +P +Y + + LC+ KT +A++V +++++G
Sbjct: 354 SEARNLMKTMEEEK------GIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPT 407
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+ M R G E +ELL M + P VE Y LI + + ++
Sbjct: 408 IRTYHAFMRILRTG--EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDE 465
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M + + P S++ ++ L G E+ M D+ +R N N+ G +
Sbjct: 466 MKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGKQY 525
Query: 243 RDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLL 282
++ + KG VK E + ++ PE RK++
Sbjct: 526 AEQRITDSKGEVNKGAIVKKSEREKNFLQQ---PEVRKVV 562
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 157/375 (41%), Gaps = 47/375 (12%)
Query: 7 FSPDTCTFNTL---IHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
FSP TL I +C+ ++ +A+ F K F++ + L+ LC+ +
Sbjct: 190 FSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVS 249
Query: 64 KAEKLFDELFEKEIVLCKFGSQPL-AASYKPIFQYLCEH-GKTRKAERVLRQIMKRGTQ- 120
A L + C P A S+ + C G R+AERV ++ G +
Sbjct: 250 DAGHL---------IFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKH 300
Query: 121 DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDG-----FLQKDKPLL 175
D +SY ++I + + G+ +L M + PD ++Y+ ++ F+ + + L+
Sbjct: 301 DVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLM 360
Query: 176 AMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIE 235
EK ++ P T++S++ L + E+ +V ML++ + I +
Sbjct: 361 KTMEEEKGIE----PNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR 416
Query: 236 LLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQF---LCKRGKLPEARKLLLFSLKNHHNV 292
+L ++ FE++ + K G +E + LC+ LLL+ V
Sbjct: 417 ILRTG---EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNV--LLLWDEMKEKTV 471
Query: 293 DIDLCNAVIL--GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL----------- 339
DL + +++ GL ++ EA+G E+ +KG+ + D++ +
Sbjct: 472 GPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNEN-VEDMIQSWFSGKQYAEQRI 530
Query: 340 -EARGKVEEAAFISK 353
+++G+V + A + K
Sbjct: 531 TDSKGEVNKGAIVKK 545
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 88/204 (43%), Gaps = 7/204 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G PD T + + S C G +DEA + + + D+ +Y+ L+++LC+ D
Sbjct: 152 NNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLH 211
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
+ DE+ + F +P S+ + +C R+A ++ ++ G + D
Sbjct: 212 VVYEFVDEMRD------DFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
Y T++ G C + M PD Y+ LI G + + A L+
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKT 325
Query: 183 MLKSSYLPKTSTWHSILARLLEKG 206
M+ + Y P T+T+ S++ + KG
Sbjct: 326 MVDAGYEPDTATYTSLMNGMCRKG 349
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 91/224 (40%), Gaps = 11/224 (4%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSA--GNLDEALKVFENMKNFQVTADSASYSILIRNLCQ 58
+K F P TF L+ C A ++ +V M N + D + I +R+LC+
Sbjct: 112 LKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCE 171
Query: 59 RGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
G D+A+ L EL EK S P +Y + ++LC+ + ++
Sbjct: 172 TGRVDEAKDLMKELTEKH-------SPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDF 224
Query: 119 TQDP--LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLA 176
P +S+ +I C L+ + F PD +Y+ ++ GF K A
Sbjct: 225 DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEA 284
Query: 177 METLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLD 220
+ +KM + P T+++++ L + G E+ M+D
Sbjct: 285 VGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD 328
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M+ D PD +F LI + C++ NL EA+ + + N D Y+ +++ C
Sbjct: 220 MRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLS 279
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
+A ++ ++ E+ G +P +Y + L + G+ +A L+ ++ G +
Sbjct: 280 KGSEAVGVYKKMKEE-------GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYE 332
Query: 121 -DPLSYMTVIMGHCREG 136
D +Y +++ G CR+G
Sbjct: 333 PDTATYTSLMNGMCRKG 349
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 107/219 (48%), Gaps = 27/219 (12%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
+ ++NT+I + +G +D+AL++F+ M + S++ +++ L QRG D+A LF
Sbjct: 139 NVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV----SWNSMVKALVQRGRIDEAMNLF 194
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVI 129
+ + +++V S+ + L ++GK +A R+ + +R +S+ +I
Sbjct: 195 ERMPRRDVV-----------SWTAMVDGLAKNGKVDEARRLFDCMPERNI---ISWNAMI 240
Query: 130 MGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
G+ + + +L M RDF ++ +I GF++ + A ++M + + +
Sbjct: 241 TGYAQNNRIDEADQLFQVMPERDFAS----WNTMITGFIRNREMNKACGLFDRMPEKNVI 296
Query: 190 PKTSTWHSILARLLEKGFPHESARV-TVMMLDRNIRQNI 227
+W +++ +E E+ V + M+ D +++ N+
Sbjct: 297 ----SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNV 331
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 90/214 (42%), Gaps = 45/214 (21%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
MK DG SPD T+N LI S G +DEA+ +FE ++ D SY+ LI L + G
Sbjct: 468 MKKDGP-SPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNG 526
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
D D+A F E+ EK G P +Y + + GKT ERV
Sbjct: 527 DVDEAHVRFKEMQEK-------GLNPDVVTYSTLMECF---GKT---ERV---------- 563
Query: 121 DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
E Y L ML + P++ Y+ L+D + + A++
Sbjct: 564 ------------------EMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLY 605
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARV 214
KM + P + T+ ++L RL + H +R+
Sbjct: 606 SKMKQQGLTPDSITY-TVLERL--QSVSHGKSRI 636
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 149/370 (40%), Gaps = 53/370 (14%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
GG D +N L+ + ++A +VFE+MK D +Y+I+IR + + G D+
Sbjct: 232 GGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDE 288
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS 124
A LF+E+ + + L G Y + Q L + KA +V ++++ G
Sbjct: 289 AVGLFNEMITEGLTLNVVG-------YNTLMQVLAKGKMVDKAIQVFSRMVETG------ 335
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
CR Y Y LL+ +L + +G L + L+ ++
Sbjct: 336 --------CRPNEYT--YSLLLNLL-------------VAEGQLVR---------LDGVV 363
Query: 185 KSSYLPKTSTWHSILARLLEK-GFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ S T +S L R L K G E+ R+ M ++ + +E L G G
Sbjct: 364 EISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKT 423
Query: 244 DKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
+A E++ +++KG V L K ++ L K+ + DI N +
Sbjct: 424 IEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNIL 483
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLEN 360
I + V EA + EL ++ N L+ L G V+EA K + +
Sbjct: 484 IASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQE-KG 542
Query: 361 LDRSVLSYSS 370
L+ V++YS+
Sbjct: 543 LNPDVVTYST 552
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 148/359 (41%), Gaps = 27/359 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILI---RNLCQRGDY 62
+PD T++TLI S G D AL + M+ +V+ D YS LI R LC DY
Sbjct: 185 ALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLC---DY 241
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QD 121
KA +F L + G P +Y + + R+A +++++ + G +
Sbjct: 242 SKAISIFSR-------LKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPN 294
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+SY T++ + + + M + D+ + +ID + Q D A
Sbjct: 295 TVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFW 354
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
+ K P ++++IL E E+ + +M ++I QN+ I++
Sbjct: 355 SLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTM 414
Query: 242 HRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDID--L 296
+KA +V+ + +G + ++ K GKL R LF V+ID L
Sbjct: 415 EHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLD--RAATLFQKLRSSGVEIDQVL 472
Query: 297 CNAVILGLCEINRVLEAFGLCYEL-VEKGLHQELTCLNDLVTALEARGKVEEAAFISKR 354
+I+ + + A L +EL + + +E +T L G+ EEA ++ ++
Sbjct: 473 YQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETA-----ITILAKAGRTEEATWVFRQ 526
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 96/223 (43%), Gaps = 39/223 (17%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ ++NT++ + A EA+ +F M+ + + +Y+ +I+ + +++KA L
Sbjct: 363 PNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNL 422
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
E+ + G +P A +Y I + GK +A + +++ G + D + Y T
Sbjct: 423 VQEMQSR-------GIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQT 475
Query: 128 VIMGHCREGAYENGYELL---------------------------IWMLRRDF----LPD 156
+I+ + R G + LL W+ R+ F + D
Sbjct: 476 MIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKD 535
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSIL 199
+ ++ C+I+ + + + + +E EKM + Y P ++ +L
Sbjct: 536 ISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVL 578
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 8/207 (3%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
FN +I AG L EAL + E + +Y+ L++N C+ GD A K+ +
Sbjct: 322 VFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMM 381
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMG 131
+ G P +Y F+Y +H KT + + ++++ G + D L+Y ++
Sbjct: 382 MTR-------GVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKM 434
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
C +G ++ M R PD+ LI + + A E + ++ +P+
Sbjct: 435 LCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQ 494
Query: 192 TSTWHSILARLLEKGFPHESARVTVMM 218
T+ I L KG + R++ +M
Sbjct: 495 YITFKMIDNGLRSKGMSDMAKRLSSLM 521
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 17/188 (9%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P T+N+L+ + C AG+L A K+ + M V + +Y+ + + ++ L
Sbjct: 353 PTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNL 412
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTV 128
+ +L E G P +Y I + LCE GK A +V +++ RG DP T
Sbjct: 413 YFKLIEA-------GHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGI-DPDLLTTT 464
Query: 129 IMGH--CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
++ H CR E +E +RR +P + + +G K M + K L S
Sbjct: 465 MLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSK-----GMSDMAKRLSS 519
Query: 187 --SYLPKT 192
S LP +
Sbjct: 520 LMSSLPHS 527
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 155/364 (42%), Gaps = 32/364 (8%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSAS----YSILIRNLCQRGDYDKAEKL 68
TF LI + AG + +A++ FE ++++ SA+ +L+ LC+ G
Sbjct: 175 TFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEG-------- 226
Query: 69 FDELFEKEIVLCKFGSQPLAASYKP---IFQYLCE----HGKTRKAERVLRQIMKRGTQD 121
+ E + L + G + +++ P IF L K ++AE++ + MK
Sbjct: 227 --HVREASMYLERIGGT-MDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEE-MKAMNVK 282
Query: 122 P--LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
P ++Y T+I G+CR + E+L M + + +++ +IDG + + A+
Sbjct: 283 PTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGM 342
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
+E+ P T++S++ + G ++++ MM+ R + +
Sbjct: 343 MERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSK 402
Query: 240 HGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL 296
H ++ + L + G + +++ LC+ GKL A ++ +KN +D DL
Sbjct: 403 HNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNK-EMKN-RGIDPDL 460
Query: 297 CNAVILG--LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKR 354
+L LC + + EAF V +G+ + + L ++G + A +S
Sbjct: 461 LTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSL 520
Query: 355 IPGL 358
+ L
Sbjct: 521 MSSL 524
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 51/227 (22%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M+ + G SP+ ++N L+ ++C+ G + EA KV+E MK V D +Y+ +I LC
Sbjct: 271 MEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNF 330
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
+ KA++LF ++ K G + +Y+ + C+ G V R++ ++G +
Sbjct: 331 EVVKAKELFRDMGLK-------GIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFE 383
Query: 121 -DPLSYMTVIMGHC-------------------REGAY---ENGYELLI----------- 146
D L+ ++ G C RE + N YELL+
Sbjct: 384 ADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDR 443
Query: 147 ------WMLRRDFLPDVEIYDCLIDGFL----QKDKPLLAMETLEKM 183
M+ + F P E Y IDG+ ++ LLA+E E +
Sbjct: 444 ALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALLAIEMAESL 490
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 108/258 (41%), Gaps = 10/258 (3%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
+ P ++N +++S V++ M + D +Y+IL+ + G D+ +
Sbjct: 215 YRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFD 274
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--LS 124
+LFDE+ + G P + +Y + L + K A L + + G DP L
Sbjct: 275 RLFDEM-------ARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGI-DPSVLH 326
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G R G E L M++ PDV Y +I G++ + A E +M
Sbjct: 327 YTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMT 386
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
LP T++S++ L G E+ + M R N + + + L G
Sbjct: 387 VKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLS 446
Query: 245 KAFEIVELLYKKGFCVKI 262
+A +++ + KKG V +
Sbjct: 447 EARKVIREMVKKGHYVHL 464
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 125/315 (39%), Gaps = 32/315 (10%)
Query: 48 SYSILIRNLCQRGDYDKAEKLFDELFEK---------EIVLCK----------------- 81
SY +L++ + G+Y +L DE+ + +++C
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 82 --FGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAY 138
F +P SY I L + + E V +Q+++ G + D L+Y ++ + R G
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 139 ENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSI 198
+ L M R F PD Y+ L+ + +KPL A+ TL M + P + ++
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 199 LARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF 258
+ L G M+ R ++ T I G DKA E+ + KG
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Query: 259 CVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFG 315
+ +++ LC G+ EA LL N + + + ++ L + ++ EA
Sbjct: 391 LPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARK 450
Query: 316 LCYELVEKGLHQELT 330
+ E+V+KG + L
Sbjct: 451 VIREMVKKGHYVHLV 465
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 155/392 (39%), Gaps = 74/392 (18%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSA-SYSILIRNLCQRGDYDKAEKLFDE 71
F I +AG +DEA VF+ ++ + +A +Y+ L+ + K+ E
Sbjct: 143 AFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAI------SKSNSSSVE 196
Query: 72 LFE---KEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTV 128
L E KE+ C F + P+ Q C GK+ +A V +I+ RG D +
Sbjct: 197 LVEARLKEMRDCGFHFDKFTLT--PVLQVYCNTGKSERALSVFNEILSRGWLDEHISTIL 254
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM----- 183
++ C+ G + +EL+ + RD + + Y LI GF+++ + A + EKM
Sbjct: 255 VVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGM 314
Query: 184 -----------------------------LKSSYLPKTSTWHSILARLLEKGFPHES--A 212
+K S +P IL +LL F ES +
Sbjct: 315 NADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPD---RGILGKLL-CSFSEESELS 370
Query: 213 RVTVMMLDRNIRQNINLSTKS-----------------IELLFGHGHRDKAFEIVELLYK 255
R+T +++ ++++ L KS I+ L G+ D EIV+LL
Sbjct: 371 RITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKD 430
Query: 256 KGFCV-----KIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRV 310
+ + V+ L K K+ A LL ++N + N +I G+C+ R
Sbjct: 431 HNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRS 490
Query: 311 LEAFGLCYELVEKGLHQELTCLNDLVTALEAR 342
E+ L E+ + G+ LN + L R
Sbjct: 491 EESLKLLGEMKDAGVEPSQFTLNCIYGCLAER 522
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 97/442 (21%), Positives = 177/442 (40%), Gaps = 99/442 (22%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
T+ LIH +D+A ++FE M+ + AD A Y +LI LC+ D + A L+ E+
Sbjct: 285 TYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEI 344
Query: 73 FEKEI---------VLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
I +LC F E +R E ++ I K+ L
Sbjct: 345 KRSGIPPDRGILGKLLCSFSE---------------ESELSRITEVIIGDIDKKSVM--L 387
Query: 124 SYMTVIMGHCRE--------------GAYE-NGYELLIWMLR---RDFLPDVEIYDCLID 165
Y ++ G R G YE +G ++ +L+ + LPD + +I+
Sbjct: 388 LYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVIN 447
Query: 166 GFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQ 225
++ +K +A+ L ++++ +P +++I+ + ++G ES ++ M D +
Sbjct: 448 CLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEP 507
Query: 226 NINLSTKSIELLFG-HGHRDKAFEIVELLYKK---GFCVKIEE---VVQFLCKRGKLPEA 278
S ++ ++G R ++LL K GF I+ +V+ LC+ G+ +A
Sbjct: 508 ----SQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDA 563
Query: 279 ---------------------------------RKLLLFS--LKNHHNVDIDLCNAVILG 303
R L LF N H D+ + +I
Sbjct: 564 CKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKA 623
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA-AFISKRIPGLENLD 362
LC+ R +EA L E+V KGL + N ++ G+++ + I + +N D
Sbjct: 624 LCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPD 683
Query: 363 RSVLSYSS------KKSRPNKA 378
V++Y+S RP++A
Sbjct: 684 --VITYTSLIHGLCASGRPSEA 703
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 89/207 (42%), Gaps = 8/207 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P L+ C G +A K +++ + + I L + D+
Sbjct: 539 GFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRG 598
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
+LF ++ C G P +Y + + LC+ +T +A+ + +++ +G + + +
Sbjct: 599 LELFRDI-------CANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVAT 651
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I G C+EG + G ++ M + PDV Y LI G +P A+ +M
Sbjct: 652 YNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMK 711
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHES 211
P T+ +++ L + G+ E+
Sbjct: 712 GKDCYPNRITFMALIQGLCKCGWSGEA 738
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 135/331 (40%), Gaps = 48/331 (14%)
Query: 38 KNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEK---------EIVLCK------- 81
+NF+ TA+ Y +L++ + G+Y +L DE+ + +++C
Sbjct: 146 ENFRHTANC--YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLA 203
Query: 82 ------------FGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTV 128
F +P SY I L + + + V Q+++ G T D L+Y V
Sbjct: 204 RDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIV 263
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
+ + R G + Y LL M++ F PD+ Y+ L+ +KPL A+ L M +
Sbjct: 264 MFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGV 323
Query: 189 LPKTSTWHSILARLLEKG-------FPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
P + +++ L G F E+ +V ++ T I G
Sbjct: 324 EPGVIHFTTLIDGLSRAGKLEACKYFMDETVKV-------GCTPDVVCYTVMITGYISGG 376
Query: 242 HRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
+KA E+ + + +KG + +++ C GK EA LL N + + +
Sbjct: 377 ELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYS 436
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQEL 329
++ L +VLEA + ++VEKG + L
Sbjct: 437 TLVNNLKNAGKVLEAHEVVKDMVEKGHYVHL 467
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P F TLI AG L+ + T D Y+++I G+ +KA
Sbjct: 322 GVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKA 381
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
E++F E+ EK G P +Y + + C GK ++A +L+++ RG
Sbjct: 382 EEMFKEMTEK-------GQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRG 427
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 16/157 (10%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D +LI + G L++A KVF+ + D SY+ LI+ RG + A+KLF
Sbjct: 168 DLYVHTSLISMYVQNGRLEDAHKVFDKSPH----RDVVSYTALIKGYASRGYIENAQKLF 223
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVI 129
DE+ K++V S+ + E G ++A + + +MK + S M +
Sbjct: 224 DEIPVKDVV-----------SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTV 272
Query: 130 MGHC-REGAYENGYELLIWMLRRDFLPDVEIYDCLID 165
+ C + G+ E G ++ +W+ F +++I + LID
Sbjct: 273 VSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALID 309
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 106/250 (42%), Gaps = 18/250 (7%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ +NT+ H + + ALK++ M + + +S ++ ++++ + + + +++
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTV 128
+ K G + + ++G+ A +V + R D +SY +
Sbjct: 157 HGHVL-------KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR---DVVSYTAL 206
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLP--DVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
I G+ G EN +L D +P DV ++ +I G+ + A+E + M+K+
Sbjct: 207 IKGYASRGYIENAQKLF------DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
+ P ST ++++ + G +V + + D N+ + I+L G + A
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320
Query: 247 FEIVELLYKK 256
+ E L K
Sbjct: 321 CGLFERLPYK 330
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 101/249 (40%), Gaps = 13/249 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D GF PD + +I++HC A +EA++ F M+ + LI L +
Sbjct: 260 DEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLN 319
Query: 64 KAEKLFDELFEKEIVLCKFGSQPL-AASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP 122
A + F+ K PL A +Y + C + A + + ++ +G
Sbjct: 320 DALEFFER--------SKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPN 371
Query: 123 LSYMTVIMGH-CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+I+ H R + YE+ M P V Y+ ++ F K++ +A++ +
Sbjct: 372 ARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWD 428
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
+M LP + S++ L + E+ MLD IR ++ ++ + L G
Sbjct: 429 EMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEG 488
Query: 242 HRDKAFEIV 250
+DK ++V
Sbjct: 489 RKDKVTDLV 497
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/314 (19%), Positives = 133/314 (42%), Gaps = 8/314 (2%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
TF + + A + EA+ F M+ F +S+ ++ ++ L + + A+K+FD++
Sbjct: 164 TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKM 223
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMG 131
+K +P SY + + + + + V R++ G + D ++Y +I
Sbjct: 224 KKKRF-------EPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINA 276
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
HC+ YE M +R+ P I+ LI+G + K A+E E+ S + +
Sbjct: 277 HCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLE 336
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVE 251
T+++++ ++ + M + + N + L +A+E+ +
Sbjct: 337 APTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQ 396
Query: 252 LLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVL 311
+ + E +V+ C + +L A K+ + + +++I LC N++
Sbjct: 397 TMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLD 456
Query: 312 EAFGLCYELVEKGL 325
EA E+++ G+
Sbjct: 457 EACEYFNEMLDVGI 470
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 112/277 (40%), Gaps = 14/277 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF ++ FN ++ + + N+ +A KVF+ MK + D SY+IL+ Q + +
Sbjct: 192 GFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRV 251
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+++ E+ ++ G +P +Y I C+ K +A R ++ +R + P
Sbjct: 252 DEVNREMKDE-------GFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHI 304
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ ++I G E + E F + Y+ L+ + + A +T+++M
Sbjct: 305 FCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMR 364
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
P T+ IL L+ E+ V M + ++ + + D
Sbjct: 365 LKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLD 421
Query: 245 KAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEA 278
A +I + + KG + ++ LC KL EA
Sbjct: 422 MAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEA 458
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 170/417 (40%), Gaps = 62/417 (14%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M +G PDT T++ LI S+ G D A+++F+ MK+ + Y+ L+ + G
Sbjct: 223 MCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVG 282
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-- 118
+KA LF+E + + G P +Y + + L + G+ +A + +++ G
Sbjct: 283 KVEKALDLFEE-------MKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLT 335
Query: 119 ----------------------------------TQDPLSYMTVIMGHCREGAYENGYEL 144
T +SY TVI A+ + E+
Sbjct: 336 PDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVS--EV 393
Query: 145 LIWM--LRRDFL-PDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILAR 201
W ++ D + P Y LIDG+ + ++ A+ LE+M + + P + + S++
Sbjct: 394 SSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI-N 452
Query: 202 LLEKGFPHESARVTVMMLDRNIRQNI-NLSTKSIELLFGH----GHRDKAFEIVELLYKK 256
L K +E+A L + +++N N+S++ ++ H G +A ++ + +
Sbjct: 453 ALGKAKRYEAAN----ELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQ 508
Query: 257 GFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEA 313
G + ++ + K G + EA LL +N DI+ N ++ G A
Sbjct: 509 GSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRA 568
Query: 314 FGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYSS 370
+ + G+ + N L+ G EEAA + + + + + ++YSS
Sbjct: 569 IEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKD-KGFEYDAITYSS 624
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 15/228 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD ++N ++ ++ AG +A VFE MK + S+ +L+ + D K
Sbjct: 386 GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKC 445
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG--TQDPL 123
E + E+ E G +P + G+ K E++L + M+ G T D
Sbjct: 446 EAIVKEMSEN-------GVEPDTFVLNSMLNLYGRLGQFTKMEKILAE-MENGPCTADIS 497
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y +I + + G E EL + + ++F PDV + I + +K + +E E+M
Sbjct: 498 TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 557
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLST 231
+ S P T A++L E V + R + + + +S+
Sbjct: 558 IDSGCAPDGGT-----AKVLLSACSSEEQVEQVTSVLRTMHKGVTVSS 600
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 109/242 (45%), Gaps = 9/242 (3%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKN-FQVTADSASYSILIRNLCQRGDYDKAEKLFDE 71
+FN L+++ ++ D +F+ + + D ASY+ LI+ LC +G + +A L DE
Sbjct: 143 SFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDE 202
Query: 72 LFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVL-RQIMKRGTQDPLSYMTVIM 130
+ K G +P ++ + GK + E++ R + K +D SY ++
Sbjct: 203 IENK-------GLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLL 255
Query: 131 GHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLP 190
G E E L + + PDV + +I GF+ + K A+ +++ K+ P
Sbjct: 256 GLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRP 315
Query: 191 KTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIV 250
++S+L + + G + + + + + + + + ++ L +D+A EIV
Sbjct: 316 LKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIV 375
Query: 251 EL 252
EL
Sbjct: 376 EL 377
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 10/188 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G PD TFN L+H + G +E +++ M V D SY+ + L +
Sbjct: 205 NKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSE 264
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
+ LFD+L E+ +P ++ + + GK +A ++I K G + PL
Sbjct: 265 EMVSLFDKLKGNEL-------KPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCR-PL 316
Query: 124 SYM--TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
++ +++ C+ G E+ YEL + + L D + ++D ++ K A E +E
Sbjct: 317 KFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVE 376
Query: 182 KMLKSSYL 189
+ YL
Sbjct: 377 LAKTNDYL 384
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 15/228 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD ++N ++ ++ AG +A VFE MK + S+ +L+ + D K
Sbjct: 364 GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKC 423
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG--TQDPL 123
E + E+ E G +P + G+ K E++L + M+ G T D
Sbjct: 424 EAIVKEMSEN-------GVEPDTFVLNSMLNLYGRLGQFTKMEKILAE-MENGPCTADIS 475
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y +I + + G E EL + + ++F PDV + I + +K + +E E+M
Sbjct: 476 TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 535
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLST 231
+ S P T A++L E V + R + + + +S+
Sbjct: 536 IDSGCAPDGGT-----AKVLLSACSSEEQVEQVTSVLRTMHKGVTVSS 578
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 157/369 (42%), Gaps = 44/369 (11%)
Query: 6 GFSPDTCTFNTLI--HSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
G S D N LI +S C + +A+K+FE M D+ S++ ++ L + G+
Sbjct: 147 GLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSE----RDTVSWNSMLGGLVKAGELR 202
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
A +LFDE+ +++++ S+ + + KA + ++ +R T +
Sbjct: 203 DARRLFDEMPQRDLI-----------SWNTMLDGYARCREMSKAFELFEKMPERNT---V 248
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLP--DVEIYDCLIDGFLQKDKPLLAMETLE 181
S+ T++MG+ + G E+ M + LP +V + +I G+ +K A ++
Sbjct: 249 SWSTMVMGYSKAG----DMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVD 304
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
+M+ S + SILA E G R+ ++ N+ N + +++ G
Sbjct: 305 QMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCG 364
Query: 242 HRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+ KAF++ + KK V ++ L G EA + LFS + D +
Sbjct: 365 NLKKAFDVFNDIPKKDL-VSWNTMLHGLGVHGHGKEA--IELFSRMRREGIRPDKVTFIA 421
Query: 302 LGLCEINRV---------LEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFIS 352
+ LC N + Y+LV + H CL DL+ + G+++EA +
Sbjct: 422 V-LCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEH--YGCLVDLLGRV---GRLKEAIKVV 475
Query: 353 KRIPGLENL 361
+ +P N+
Sbjct: 476 QTMPMEPNV 484
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 129/289 (44%), Gaps = 22/289 (7%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADS---ASYSILIRNLCQRG 60
DG F P + L+ + N D L VF + ++ T S A Y + R+L G
Sbjct: 326 DGPFKPSIQDCSLLLRYLSGSPNPDLDL-VFRVSRKYESTGKSLSKAVYDGIHRSLTSVG 384
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT- 119
+D+AE++ + G +P +Y + LC+ + +A VL Q+ +G
Sbjct: 385 RFDEAEEITK-------AMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCF 437
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
D ++ +I GHC+ + ML + F D + D LIDGF+ +K A
Sbjct: 438 PDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIF 497
Query: 180 LEKMLKSSYL-PKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIE-LL 237
L +M+K++ + P ST+ ++ +LL+ E+ + MM +QN ++ + L
Sbjct: 498 LMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMM----KKQNYPAYAEAFDGYL 553
Query: 238 FGHGHRDKAFEIVELLYKK---GFCVKIEEVVQFLCKRGKLPEARKLLL 283
G + A + +++L K F V++ + G+L +A+ LL
Sbjct: 554 AKFGTLEDAKKFLDVLSSKDSPSFAAYF-HVIEAFYREGRLTDAKNLLF 601
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 129/346 (37%), Gaps = 44/346 (12%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D GF+ T NTLIH + D +++E + ++ + + I+I+ LC+ G
Sbjct: 192 DCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLK 251
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
+ L D + K + + L +F+ L E + R +MK D +
Sbjct: 252 EVVDLLDRICGKRCLPSVIVNTSL------VFRVLEEMRIEESMSLLKRLLMKNMVVDTI 305
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
Y V+ +EG + ++ ML+R F + +Y + +K A L +M
Sbjct: 306 GYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEM 365
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+S P T++ ++ GF G
Sbjct: 366 EESGVSPYDETFNCLIG-----GFAR------------------------------FGWE 390
Query: 244 DKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
+K E E++ +G C E+V+ + K + A ++L S+ D + +
Sbjct: 391 EKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHL 450
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVE 346
I G E N + +A L YE+ + + L+ L GKVE
Sbjct: 451 IRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVE 496
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 97/238 (40%), Gaps = 8/238 (3%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
DT ++ ++++ G+L A KVF+ M +A+S Y++ +R C++GD +AE+L
Sbjct: 303 DTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLL 362
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVI 129
E+ E G P ++ + G K ++ RG S +
Sbjct: 363 SEMEES-------GVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEM 415
Query: 130 MGHCREGAYEN-GYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
+ + N E+L + + F+PD Y LI GF++ + A++ +M
Sbjct: 416 VKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKM 475
Query: 189 LPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P + S++ L G + +M R I N ++ I+ G + A
Sbjct: 476 SPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNA 533
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 132/340 (38%), Gaps = 42/340 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF D +I +C NL EAL + M + + S++++ C+ +A
Sbjct: 313 GFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEA 372
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+ F E + I L + Y F L + G+ +A +L+++ RG D ++
Sbjct: 373 LEKFKEFRDMNIFLDR-------VCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVIN 425
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G+C +G + +L+ M+ PD+ Y+ L+ G + +E E+M
Sbjct: 426 YTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMK 485
Query: 185 KSSYLPKTSTWHSILARL---------------LEKGFPHESARVTVMMLDRNIRQNINL 229
P T I+ L LE+ P A + L
Sbjct: 486 AEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEA------GL 539
Query: 230 STKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNH 289
S K+ KAF +E +K +K+ LC G L +A +L
Sbjct: 540 SKKAY----------KAFVRLEYPLRKSVYIKL---FFSLCIEGYLEKAHDVLKKMSAYR 586
Query: 290 HNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQEL 329
+C +I C++N V EA L +VE+GL +L
Sbjct: 587 VEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDL 626
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/396 (20%), Positives = 167/396 (42%), Gaps = 42/396 (10%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD + TLI +C G + +AL + + M ++ D +Y++L+ L + G +
Sbjct: 416 DRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEE 475
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
+ ++++ + + G +P A + I + LC K ++AE + ++ ++
Sbjct: 476 EVLEIYERMKAE-------GPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKA 528
Query: 124 SYMTVIMGHCREGAYENGYELLI---WMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
S+ + G+C G + Y+ + + LR+ + C I+G+L+K A + L
Sbjct: 529 SF---VKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLC-IEGYLEK-----AHDVL 579
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
+KM P S ++ + E+ + M++R + ++ T I
Sbjct: 580 KKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRL 639
Query: 241 GHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKL-PE---------------ARKLLLF 284
KA + E + ++G + L + KL PE A ++L
Sbjct: 640 NELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLRE 699
Query: 285 SLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGK 344
+D+ +I C++N + +A L +++ GL ++ L+++ +G
Sbjct: 700 FSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGY 759
Query: 345 VEEAAF----ISKR--IPGLENLDRSVLSYSSKKSR 374
++ A +SK+ IP E+ + +V S + K R
Sbjct: 760 IDMAVTLVTELSKKYNIPS-ESFEAAVKSAALKAKR 794
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 150/346 (43%), Gaps = 51/346 (14%)
Query: 15 NTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFE 74
N L++ G + + +F+ +K + A+ +Y+I+++ LC++G+ ++A L L E
Sbjct: 185 NFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAML---LIE 241
Query: 75 KEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG--TQDPLSYM--TVIM 130
E V FG YK LC G+T KA ++ +++ R D L + V+
Sbjct: 242 NESV---FG-------YKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVR 291
Query: 131 GHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLP 190
G C E + ++I M F DV Y CL +++ K+ LP
Sbjct: 292 GFCNEMKMKAAESVIIEMEEIGFGLDV--YACL--------------AVIDRYCKNMNLP 335
Query: 191 KTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIV 250
+ + L ++L KG V++++ +++ +++E RD +
Sbjct: 336 EALGF---LDKMLGKGLKVNCVIVSLIL---QCYCKMDMCLEALEKF--KEFRDMNIFLD 387
Query: 251 ELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNV-DIDLCNAVILGLCEINR 309
+ Y F L K G++ EA +LL +K+ V D+ +I G C +
Sbjct: 388 RVCYNVAF--------DALSKLGRVEEAFELLQ-EMKDRGIVPDVINYTTLIDGYCLQGK 438
Query: 310 VLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
V++A L E++ G+ +L N LV+ L G EE I +R+
Sbjct: 439 VVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERM 484
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 109/251 (43%), Gaps = 19/251 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + ++ N++I + +++A + FE++ + SY+ + C+ ++++A
Sbjct: 403 GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLV----SYNTFLDGTCRNLNFEQA 458
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG--TQDPL 123
KL E+ E+E+ + F ++ + + G RK E++ Q++K G P+
Sbjct: 459 FKLLSEITERELGVSAF-------TFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPV 511
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+ M + + G+ + + +M R+ + + +I GF + + +ET +M
Sbjct: 512 CNALISM-YSKCGSIDTASRVFNFMENRNVIS----WTSMITGFAKHGFAIRVLETFNQM 566
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESAR-VTVMMLDRNIRQNINLSTKSIELLFGHGH 242
++ P T+ +IL+ G E R M D I+ + ++LL G
Sbjct: 567 IEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGL 626
Query: 243 RDKAFEIVELL 253
AFE + +
Sbjct: 627 LTDAFEFINTM 637
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 13/221 (5%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M DG D+ TF++L+ S A + V + F + DS Y+ LI + G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-T 119
D KAE +F+ + +FG + + S+ + +G+ A +V + ++ G
Sbjct: 112 DSAKAEDVFE-------TMRRFGKRDV-VSWSAMMACYGNNGRELDAIKVFVEFLELGLV 163
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRD-FLPDVEIYDCLIDGFLQKDKPLLAME 178
+ Y VI G L ++++ F DV + LID F++ + + E
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGEN---SFE 220
Query: 179 TLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMML 219
K+ TW ++ R ++ GFP E+ R + M+
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMV 261
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 21/197 (10%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
T+ L++ + +A +DEA+ VFE K F + D ++ L+ LC+ + AE LF
Sbjct: 180 TYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLF--- 236
Query: 73 FEKEIVLC----KFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM-KRGTQDPLSYMT 127
C +FG A + I C G +A+R + I+ + D +SY T
Sbjct: 237 -------CSRRREFGCDIKAMNM--ILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGT 287
Query: 128 VIMGHCREGAYENGYELL--IWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+I ++G EL +W RR+ PDV+I + +ID K + A+E ++ +
Sbjct: 288 MINALTKKGKLGKAMELYRAMWDTRRN--PDVKICNNVIDALCFKKRIPEALEVFREISE 345
Query: 186 SSYLPKTSTWHSILARL 202
P T++S+L L
Sbjct: 346 KGPDPNVVTYNSLLKHL 362
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 8/206 (3%)
Query: 11 TCTF-NTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
T TF +TLI S+ A D A+K+FE M S++ L+ +++ +LF
Sbjct: 101 TETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLF 160
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVI 129
DE ++ + P SY + + C+ GK KA ++R + +G + + T I
Sbjct: 161 DEFPQRYNNIT-----PDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTI 215
Query: 130 MGHC-REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
+G + G + L I M+ + D +Y+ + K+ P E +E+M
Sbjct: 216 LGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMN-AAKESPERVKELMEEMSSVGL 274
Query: 189 LPKTSTWHSILARLLEKGFPHESARV 214
P T +++ ++ KG E+ +V
Sbjct: 275 KPDTVSYNYLMTAYCVKGMMSEAKKV 300
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 3/196 (1%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
+ +L+ N+ EA +V ++MK+ +T D ++ L+ LC+R L E
Sbjct: 210 VYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEA 269
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--LSYMTVIM 130
+ + + QP + SY + L + R++ ++L Q MKR DP SY V+
Sbjct: 270 LNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQ-MKRSGCDPDTGSYYFVVR 328
Query: 131 GHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLP 190
G + G +++ M+ R F P+ + Y LI ++ A++ EKM +SS
Sbjct: 329 VLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGG 388
Query: 191 KTSTWHSILARLLEKG 206
+ ++ +L + G
Sbjct: 389 YGQVYDLLIPKLCKGG 404
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 91/209 (43%), Gaps = 6/209 (2%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P+ ++ L+ S+ G + A +F M++ + +Y I+++ + + +A
Sbjct: 176 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 235
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
E++F+ L +++ K +P Y + + G KA +V ++ +G P S
Sbjct: 236 EEVFETLLDEK----KSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGV--PQST 289
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+T E +Y+ ++ M R D PDV Y LI + + + A+ E+ML
Sbjct: 290 VTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLD 349
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARV 214
+ P ++ +L G ++ V
Sbjct: 350 AGVRPTHKAYNILLDAFAISGMVEQAKTV 378
>AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1918242-1919273 REVERSE
LENGTH=343
Length = 343
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 79/201 (39%), Gaps = 40/201 (19%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+SPDT T N L+ S C+ LDEA+KV E M D SY +I +LC
Sbjct: 166 GYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPDVESYGAVINSLCLARKTTDV 225
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
K+ E+ K G P K A R R+I K
Sbjct: 226 VKIVKEMVSKA------GISPRKGMLT----------KVAAALRANREIWK--------- 260
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
E++ ++ RD+ + E Y+ +++G L+ + +LA + + +M
Sbjct: 261 ---------------AIEMIEFVESRDYPVEFESYEVVVEGCLEVREYILAGKVVMRMTD 305
Query: 186 SSYLPKTSTWHSILARLLEKG 206
++P ++ RL+ G
Sbjct: 306 RGFIPYIKVRQKVVERLINIG 326
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 91/209 (43%), Gaps = 6/209 (2%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P+ ++ L+ S+ G + A +F M++ + +Y I+++ + + +A
Sbjct: 169 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 228
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
E++F+ L +++ K +P Y + + G KA +V ++ +G P S
Sbjct: 229 EEVFETLLDEK----KSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGV--PQST 282
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+T E +Y+ ++ M R D PDV Y LI + + + A+ E+ML
Sbjct: 283 VTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLD 342
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARV 214
+ P ++ +L G ++ V
Sbjct: 343 AGVRPTHKAYNILLDAFAISGMVEQAKTV 371
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 139/348 (39%), Gaps = 20/348 (5%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D T+ + H ++GN+ +AL V E MK + +Y ++++ + + D AE+ F
Sbjct: 432 DEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAF 491
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTV 128
L + + P A+S + KA+ ++QIM D Y T
Sbjct: 492 RALSKTGL--------PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTA 543
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
+ +C+EG +L++ M R + D L + +K + E +L S
Sbjct: 544 MRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNK----HDKHEAVLNVSQ 599
Query: 189 LPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFE 248
L + + RL E A + +M +N + I G KA
Sbjct: 600 LDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVN---RVISSFVREGDVSKAEM 656
Query: 249 IVELLYKKGFCVKIEEVVQFLCKRG---KLPEARKLLLFSLKNHHNVDIDLCNAVILGLC 305
I +++ + G ++ E + + G KL EA++L L + + ++I
Sbjct: 657 IADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYL-AAGESKTPGKSVIRSMIDAYV 715
Query: 306 EINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISK 353
+ +A+GL E EKG ++ LV AL RGK EA IS+
Sbjct: 716 RCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISR 763
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 140/347 (40%), Gaps = 19/347 (5%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD C N L+ S G D A K+F M++ V+ ++ + + I C+ + ++ +L
Sbjct: 152 PDVC--NRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRL 209
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
DE+ K+ L GS I LC+ + A +L ++ + D ++Y
Sbjct: 210 VDEV--KKANLNINGSIIALL----ILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRV 263
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFL---PDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ G N YE + + ++ L P Y I + + A E E ++
Sbjct: 264 IAEAFVVTG---NLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAE-VI 319
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
S P + L + P + V M+ I +K + L H D
Sbjct: 320 VSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSD 379
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+ ELL KG+ +++ ++ FLCK G++ E+ L K D+ L NA+I
Sbjct: 380 HLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALI 439
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
C+ + A L E+ +G LT N L+ L G+ EE+
Sbjct: 440 EACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEES 486
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 115/282 (40%), Gaps = 13/282 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P + + I SA L EA +V E + + + D+ LI ++ D D A
Sbjct: 288 GVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAV-DPDSA 346
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
+ + + G P + + + LC H K+ + + +G L S
Sbjct: 347 VEFL-------VYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQS 399
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I C+ G Y L M + PDV +Y+ LI+ + + A + ++M
Sbjct: 400 YSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMF 459
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+T++ ++ +L E+G ES R+ ML+R I + + IE L +
Sbjct: 460 VEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIE 519
Query: 245 KAFEI----VELLYKKGFCVKIEEVVQFLCKRGKLPEARKLL 282
A E+ +E +K + E V LC G EA +LL
Sbjct: 520 AAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLL 561
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +T +NTL+ ++ + +++E +F M++ + +A+Y+IL+ +R D
Sbjct: 374 GIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIV 433
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRK-----AERVLRQIMKRGTQ 120
E L E+ + G +P SY + + +G+T+K A+ LR MK+
Sbjct: 434 ETLLREMED-------LGLEPNVKSYTCL---ISAYGRTKKMSDMAADAFLR--MKKVGL 481
Query: 121 DPL--SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME 178
P SY +I + G +E Y M + P VE Y ++D F + ME
Sbjct: 482 KPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLME 541
Query: 179 TLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARV 214
+ ML+ T++++L ++G E+ V
Sbjct: 542 IWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDV 577
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 150/369 (40%), Gaps = 18/369 (4%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D +N I ++ D+A +V+E M V D+ + +ILI L + G ++ K
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAG---RSAKEV 328
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTV 128
E+FEK + + G + + + + C+ G +A + ++ K+G + + + Y T+
Sbjct: 329 WEIFEK---MSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTL 385
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
+ + + E L M + P Y+ L+D + ++ +P + L +M
Sbjct: 386 MDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGL 445
Query: 189 LPKTSTWHSIL-ARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P ++ ++ A K +A + M ++ + + T I G +KA+
Sbjct: 446 EPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAY 505
Query: 248 EIVELLYKKGFCVKIEEVVQFL------CKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
E + K+G +E L GKL E KL+L + N ++
Sbjct: 506 ASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITY---NTLL 562
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENL 361
G + +EA + E + GL + N L+ A G+ + + K + L NL
Sbjct: 563 DGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAAL-NL 621
Query: 362 DRSVLSYSS 370
++YS+
Sbjct: 622 KPDSITYST 630
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNL-DEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
D G P+ ++ LI ++ + D A F MK + S SY+ LI G +
Sbjct: 442 DLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWH 501
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK---RGT 119
+KA F+E+ CK G +P +Y + G T K + + +++ +GT
Sbjct: 502 EKAYASFEEM-------CKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGT 554
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
+ ++Y T++ G ++G Y +++ + P V Y+ L++ + + + +
Sbjct: 555 R--ITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQL 612
Query: 180 LEKMLKSSYLPKTSTWHSIL 199
L++M + P + T+ +++
Sbjct: 613 LKEMAALNLKPDSITYSTMI 632
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P T+N L+ ++ D + M++ + + SY+ LI Y
Sbjct: 407 DKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLI------SAYG 460
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
+ +K+ D + + + K G +P + SY + G KA ++ K G + +
Sbjct: 461 RTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSV 520
Query: 124 -SYMTVIMGHCREGAYENGYELLIW--MLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
+Y +V+ R G + G + IW MLR Y+ L+DGF ++ + A + +
Sbjct: 521 ETYTSVLDAFRRSG--DTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVV 578
Query: 181 EKMLKSSYLPKTSTWHSIL 199
+ K P T++ ++
Sbjct: 579 SEFSKMGLQPSVMTYNMLM 597
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 146/363 (40%), Gaps = 51/363 (14%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PDT ++N ++ + N ++A F+ M D+AS++ +I +RG+ +KA +L
Sbjct: 122 PDTFSYNIMLSCYVRNVNFEKAQSFFDRMP----FKDAASWNTMITGYARRGEMEKAREL 177
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTV 128
F + EK V S+ + E G KA + RG +++ +
Sbjct: 178 FYSMMEKNEV-----------SWNAMISGYIECGDLEKASHFFKVAPVRGV---VAWTAM 223
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
I G+ + E + M ++ ++ +I G+++ +P ++ ML+
Sbjct: 224 ITGYMKAKKVELAEAMFKDMTVNK---NLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 280
Query: 189 LPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLS---------TKSIELLFG 239
P +S S L E ++ + L R I Q ++ S T I +
Sbjct: 281 RPNSSGLSSALLGCSE---------LSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCK 331
Query: 240 HGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNA 299
G A+++ E++ KK V ++ + G +A L + N D A
Sbjct: 332 CGELGDAWKLFEVMKKKD-VVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVA 390
Query: 300 VIL-----GLCEINRV-LEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISK 353
V+L GL I E+ Y++ + H TC+ DL L GK+EEA + +
Sbjct: 391 VLLACNHAGLVNIGMAYFESMVRDYKVEPQPDH--YTCMVDL---LGRAGKLEEALKLIR 445
Query: 354 RIP 356
+P
Sbjct: 446 SMP 448
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+ +I + G +DEA ++ K +Y LIR C+ +YD+A
Sbjct: 437 GLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEA 496
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHG-KTRKAERVLRQIMKRG 118
KL +E + +FG QP A Y + Q C KAE + ++ ++G
Sbjct: 497 LKLLNE-------MDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKG 543
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 8/155 (5%)
Query: 14 FNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELF 73
F+ +IHS C N+ +A + +M + +A +++++ + GD D+A+++ +L
Sbjct: 375 FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVL-KLM 433
Query: 74 EKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGH 132
E G +P +Y I + G +A+ +L + K+ + P++Y +I G+
Sbjct: 434 ESR------GLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGY 487
Query: 133 CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGF 167
C+ Y+ +LL M R P+ + Y+ LI F
Sbjct: 488 CKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSF 522
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 10/188 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P++ T+ I C N EAL++FE+M + LI + KA
Sbjct: 240 GFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKA 299
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+LFDE + K G P +Y + L + G A +V++++ ++G + D ++
Sbjct: 300 RQLFDE-------ISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVT 352
Query: 125 YMTVIMG--HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+ ++ +G +E + E M R +P L+ F + L ++ +
Sbjct: 353 FHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKY 412
Query: 183 MLKSSYLP 190
ML+ Y P
Sbjct: 413 MLEKGYCP 420
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 83/195 (42%), Gaps = 9/195 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P +F +I DE KV M F V A+Y+I+I+ LC+R +A+ L
Sbjct: 215 PTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKAL 274
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
D ++ C+ +P + +Y + C +A + ++ G + D Y T
Sbjct: 275 ID-----GVMSCRM--RPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFT 327
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I C+ G +E L + ++++P + L++G + K A E L ++K
Sbjct: 328 LIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKE-LIAVVKEK 386
Query: 188 YLPKTSTWHSILARL 202
+ W+ + A L
Sbjct: 387 FTRNVDLWNEVEAAL 401
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 102/229 (44%), Gaps = 17/229 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+N +I C +G+ + + M+ + +AS+ ++I + +D+
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK-RGTQDPLS 124
K+ + E FG A+Y + Q LC+ K+ +A+ ++ +M R + ++
Sbjct: 237 RKVMRMMDE-------FGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVT 289
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIY----DCLIDGFLQKDKPLLAMETL 180
Y +I G C E + L M+ + PD E Y CL G + +L E++
Sbjct: 290 YSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESM 349
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINL 229
EK +++P S ++ L + E+ + ++ ++ R N++L
Sbjct: 350 EK----NWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEKFTR-NVDL 393
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 154/352 (43%), Gaps = 49/352 (13%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D +N I S+ G +EAL+VF+ M + S SY+ +I + G+++ A KLF
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWS----SVSYNGMISGYLRNGEFELARKLF 118
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVI 129
DE+ E+++V S+ + + + KA R L +IM +D S+ T++
Sbjct: 119 DEMPERDLV-----------SWNVMIKGYVRNRNLGKA-RELFEIMPE--RDVCSWNTML 164
Query: 130 MGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
G+ + G ++ + M ++ DV ++ L+ ++Q K ME + KS
Sbjct: 165 SGYAQNGCVDDARSVFDRMPEKN---DVS-WNALLSAYVQNSK----MEEACMLFKSREN 216
Query: 190 PKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEI 249
+W+ +L ++K E+ + M N+R ++ +T ++ G+ K E
Sbjct: 217 WALVSWNCLLGGFVKKKKIVEARQFFDSM---NVRDVVSWNT----IITGYAQSGKIDEA 269
Query: 250 VELLYKKGFCVKIEEVVQFLCK-----RGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
+L + +++V + + ++ E + L + + V NA++ G
Sbjct: 270 RQLFDES----PVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVS---WNAMLAGY 322
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIP 356
+ R+ + EL + + ++ N ++T GK+ EA + ++P
Sbjct: 323 VQGERM----EMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP 370
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 88/209 (42%), Gaps = 44/209 (21%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
TFN +++ +C+ G +EA++VF M +F+ + D+ S++ L+ LC +AEKL+ E+
Sbjct: 352 TFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEM 411
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGH 132
EK + KP D +Y ++M
Sbjct: 412 EEKNV--------------KP---------------------------DEYTY-GLLMDT 429
Query: 133 C-REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
C +EG + G M+ + P++ +Y+ L D ++ K L ++ M+ S
Sbjct: 430 CFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGK-LDDAKSFFDMMVSKLKMD 488
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLD 220
+ I+ L E G E ++ MLD
Sbjct: 489 DEAYKFIMRALSEAGRLDEMLKIVDEMLD 517
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 99/220 (45%), Gaps = 5/220 (2%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENM--KNFQVTADSASYSILIRNLCQRGDY 62
GGF D + L+ + EA++ +E +N +V + +Y+ ++ L + G +
Sbjct: 267 GGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKF 326
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK-RGTQD 121
D+A KLFD + +KE + + L ++ + C GK +A V RQ+ + + D
Sbjct: 327 DEALKLFDAV-KKEHNPPRHLAVNL-GTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPD 384
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
LS+ ++ C +L M ++ PD Y L+D ++ K +
Sbjct: 385 TLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYK 444
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDR 221
M++S+ P + ++ + +L++ G ++ MM+ +
Sbjct: 445 TMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK 484
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 120/276 (43%), Gaps = 10/276 (3%)
Query: 17 LIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKE 76
+I + AG + A KVFE M N S++ L+ +D E+LF+EL
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNEL---- 170
Query: 77 IVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCRE 135
K +P SY + + LCE +A +L +I +G + D +++ T+++ +
Sbjct: 171 --PGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLK 228
Query: 136 GAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTW 195
G +E G E+ M+ ++ D+ Y+ + G + K + ++ S P ++
Sbjct: 229 GQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSF 288
Query: 196 HSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYK 255
++++ + +G E+ ++ R + + + G + A E+ + +
Sbjct: 289 NAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFS 348
Query: 256 KGFCV---KIEEVVQFLCKRGKLPEARKLLLFSLKN 288
K + V ++++V L K K EA +++ + N
Sbjct: 349 KRYLVGQTTLQQLVDELVKGSKREEAEEIVKIAKTN 384
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 102/235 (43%), Gaps = 11/235 (4%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
+ G PD ++NTLI + C +L EA+ + + ++N + D +++ L+ + +G
Sbjct: 170 LPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKG 229
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
++ E+++ ++ EK + + +Y L K+++ + ++ G +
Sbjct: 230 QFELGEEIWAKMVEKNVAID-------IRTYNARLLGLANEAKSKELVNLFGELKASGLK 282
Query: 121 -DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
D S+ +I G EG + +++ + PD + L+ + A+E
Sbjct: 283 PDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIEL 342
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRN--IRQNINLSTK 232
++ YL +T ++ L+ KG E A V + N ++ +NL ++
Sbjct: 343 FKETFSKRYLVGQTTLQQLVDELV-KGSKREEAEEIVKIAKTNDFLKLKLNLPSQ 396
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 13/137 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF D T+ T++ AG + VF MK V D+ +Y+ LI + GD D A
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
+L++E+ + G +P SY + L G+ +A V +++++
Sbjct: 177 MRLWEEMRDN-------GCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHT 229
Query: 126 MTVIM------GHCREG 136
TV+M G C E
Sbjct: 230 YTVLMEYLVATGKCEEA 246
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 143/356 (40%), Gaps = 34/356 (9%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M D N+LIH + S G+LD A KVF +K D S++ +I Q+G
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE----KDVVSWNSMINGFVQKG 211
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAE---RVLRQIMKR 117
DKA +LF K S+ + AS+ + L K R E +V I +
Sbjct: 212 SPDKALELFK----------KMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEEN 261
Query: 118 GTQDPLSYMTVIMG-HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLA 176
L+ ++ + + G+ E+ L M +D + + ++DG+ + A
Sbjct: 262 RVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNV----TWTTMLDGYAISEDYEAA 317
Query: 177 METLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARV-TVMMLDRNIRQNINLSTKSIE 235
E L M + + W+++++ + G P+E+ V + L +N++ N ++
Sbjct: 318 REVLNSMPQKDIV----AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLS 373
Query: 236 LLFGHGHRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNV 292
G + I + K G + ++ K G L ++R++ K
Sbjct: 374 ACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR---- 429
Query: 293 DIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
D+ + +A+I GL EA + Y++ E + ++ A G V+EA
Sbjct: 430 DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEA 485
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 79/170 (46%), Gaps = 8/170 (4%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M DG PD CT N++I S+ + N+ + + + V D +++ILI + + G
Sbjct: 276 MIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAG 335
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
Y K + D + ++ L +Y + + + G+ K + V R++ +G +
Sbjct: 336 MYKKMCSVMDFMEKRFFSLT-------TVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVK 388
Query: 121 -DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQ 169
+ ++Y +++ + + G +L ++ D + D ++C+I+ + Q
Sbjct: 389 PNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQ 438
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
MK +G PDT N +I ++ +DEA++VF+ M + ++ +YS L++ +C++G
Sbjct: 214 MKSNGVI-PDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKG 272
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-T 119
+ + E+ K +V P + Y + L + +A V+ ++ +
Sbjct: 273 RVGQGLGFYKEMQVKGMV-------PNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLS 325
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLID 165
D L+Y TV+ CR G E++ +RD + Y L+D
Sbjct: 326 PDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 371
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/352 (17%), Positives = 137/352 (38%), Gaps = 29/352 (8%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+N+L+ + S G +A+ V + M+ + ++S S L++ + + G
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
+ + + ++ + L Y + G A V + ++ +++
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMY-------IKTGYLPYARMVFDMM---DAKNIVAW 294
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+++ G ++ L+I M + PD ++ L G+ KP A++ + KM +
Sbjct: 295 NSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKE 354
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
P +W +I + + G + +V + M + + N + +++L
Sbjct: 355 KGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHS 414
Query: 246 AFEIVELLYKKGFCVK---------IEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL 296
E+ GFC++ +V K G L A + + + +KN +
Sbjct: 415 GKEV------HGFCLRKNLICDAYVATALVDMYGKSGDLQSAIE-IFWGIKNK---SLAS 464
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
N +++G R E ++E G+ + +++ + G V+E
Sbjct: 465 WNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEG 516
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 106/250 (42%), Gaps = 13/250 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+N+L + + G ++AL V MK V + S++ + + G++ A
Sbjct: 321 GIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNA 380
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
K+F ++ E+ G P AA+ + + L + V +++ D
Sbjct: 381 LKVFIKMQEE-------GVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYV 433
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
++ + + G ++ E+ W ++ L ++C++ G+ + + ML
Sbjct: 434 ATALVDMYGKSGDLQSAIEIF-WGIKNKSLAS---WNCMLMGYAMFGRGEEGIAAFSVML 489
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDR-NIRQNINLSTKSIELLFGHGHR 243
++ P T+ S+L+ G E + +M R I I + ++LL G+
Sbjct: 490 EAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYL 549
Query: 244 DKAFEIVELL 253
D+A++ ++ +
Sbjct: 550 DEAWDFIQTM 559
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P + TLI + +G LD+A ++F M + +Y+ +IR LC G++ +A
Sbjct: 719 GIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA 778
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
L E+ + G P Y + YL + GK +A +V+++++K+G
Sbjct: 779 CWLLKEMESR-------GCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/388 (19%), Positives = 153/388 (39%), Gaps = 56/388 (14%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFEN-------------------------------- 36
P+ ++N +I++HC GN+DEAL+V+ +
Sbjct: 214 PNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAAS 273
Query: 37 ----MKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYK 92
M + ADS Y+ LIR GD+DKA + FDEL K C + A++
Sbjct: 274 LLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSK----CTVYDGIVNATF- 328
Query: 93 PIFQYLCEHGKTRKAERVLRQIM-KRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRR 151
+Y E G ++A R ++ K+ P + ++ + G + + L ML
Sbjct: 329 --MEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDN 386
Query: 152 DFLPDV-----EIYDCLIDGFLQKDKPLLAMETLE----KMLKSSYLPKTSTWHSILARL 202
P++ + +++ + + A+ T + K+ ++ + +I+ R
Sbjct: 387 HAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRF 446
Query: 203 LEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKI 262
E+G E+ R + R++ + I+ D A ++++ + V
Sbjct: 447 CEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVA 506
Query: 263 E---EVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYE 319
+ V L K GKL E+ ++L + D + + V+ GLC+ + + +A + E
Sbjct: 507 DFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGE 566
Query: 320 LVEKGLHQELTCLNDLVTALEARGKVEE 347
++ + ++ E G+ EE
Sbjct: 567 MIRHNVGVTTVLREFIIEVFEKAGRREE 594
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/340 (19%), Positives = 138/340 (40%), Gaps = 38/340 (11%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENM-KNFQVTADSASYSILIRNLCQRGDYDKAEK 67
P T N +I + A E++ +F+ K + + SY+ +I C G+ D+A +
Sbjct: 178 PTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALE 237
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYM 126
++ +L P + +Y+ + + L + G+ A +LR+++ +G D Y
Sbjct: 238 VYRH------ILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYN 291
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDG-----FLQKDKPLLAMETLE 181
+I G+ G ++ E + +YD +++ + +K AME+
Sbjct: 292 NLIRGYLDLGDFDKAVEFF-----DELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYR 346
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNI-NLSTKSIELL--- 237
+L + T + +L L+ G E+ + MLD + NI ++++ ++ ++
Sbjct: 347 SLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNE 406
Query: 238 -FGHGHRDKAFEIVELLYKK-----------GFCVKIEEVVQFLCKRGKLPEARKLLLFS 285
F G +A + + K G+C +V C++G L EA +
Sbjct: 407 CFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYC----NIVTRFCEQGMLTEAERFFAEG 462
Query: 286 LKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGL 325
+ D A+I + R+ +A + +V+ L
Sbjct: 463 VSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNL 502
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 131/294 (44%), Gaps = 22/294 (7%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M+ + PD ++ LI G A+ +F MKN D++ Y+ LI
Sbjct: 123 MQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTR 182
Query: 61 DYDKA-EKLFDELFE-KEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKR 117
D KA EK+ L + K I C QP +Y + + + GK + + + + M
Sbjct: 183 DKAKALEKVRGYLDKMKGIERC----QPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSP 238
Query: 118 GTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAM 177
+ D ++ V+ + + G + +L M + PD+ ++ LID + +K +
Sbjct: 239 VSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKME 298
Query: 178 ETLEKMLKSSYLPKTSTWHSIL-----ARLLEKGFPHESARVTVMMLDRNIRQNINLSTK 232
+T + +++S P T++S++ AR+++K + V M D N + ++ +
Sbjct: 299 QTFKSLMRSKEKPTLPTFNSMIINYGKARMIDK-----AEWVFKKMNDMNYIPSF-ITYE 352
Query: 233 SIELLFGH-GHRDKAFEIVELLYKKGFCVK---IEEVVQFLCKRGKLPEARKLL 282
+ +++G+ G +A EI E + + +K + +++ C+ G EA KL
Sbjct: 353 CMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLF 406
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD ++ ++ +AG E LKVF M V+ ++ +YS+LI+ L G K K
Sbjct: 230 PDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKK 289
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
+ L E + G P AA+Y +F+ GK A +L+++ +G
Sbjct: 290 Y--LLE----MMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKG 333
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 131/294 (44%), Gaps = 22/294 (7%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M+ + PD ++ LI G A+ +F MKN D++ Y+ LI
Sbjct: 123 MQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTR 182
Query: 61 DYDKA-EKLFDELFE-KEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKR 117
D KA EK+ L + K I C QP +Y + + + GK + + + + M
Sbjct: 183 DKAKALEKVRGYLDKMKGIERC----QPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSP 238
Query: 118 GTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAM 177
+ D ++ V+ + + G + +L M + PD+ ++ LID + +K +
Sbjct: 239 VSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKME 298
Query: 178 ETLEKMLKSSYLPKTSTWHSIL-----ARLLEKGFPHESARVTVMMLDRNIRQNINLSTK 232
+T + +++S P T++S++ AR+++K + V M D N + ++ +
Sbjct: 299 QTFKSLMRSKEKPTLPTFNSMIINYGKARMIDK-----AEWVFKKMNDMNYIPSF-ITYE 352
Query: 233 SIELLFGH-GHRDKAFEIVELLYKKGFCVK---IEEVVQFLCKRGKLPEARKLL 282
+ +++G+ G +A EI E + + +K + +++ C+ G EA KL
Sbjct: 353 CMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLF 406
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
DGGFS ++ LI C G +D+AL V +M N ++ ++Y ++ +L ++ +
Sbjct: 101 DGGFSRKNA-YDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIE 159
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
+A ++ + + K + + +Y C G+ A V+R+I + G + D
Sbjct: 160 EAWRVVESMRSKSVSMD-------VTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDS 212
Query: 123 LSYMTVIMGHCREGAYENGYELLIWM 148
SY +++G CR G E +L M
Sbjct: 213 RSYDALVLGACRAGKVEAAMAILRRM 238
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 84/180 (46%), Gaps = 10/180 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P T++ ++ S ++EA +V E+M++ V+ D +Y+ + + C G+ + A
Sbjct: 139 GLTP--STYHPILCSLTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESA 196
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS- 124
++ ++ E G+ P + SY + C GK A +LR++ + G S
Sbjct: 197 SEVMRKIEED-------GNSPDSRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYST 249
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ VI G G Y G E ++ +D D E + L +++ + AM +++M+
Sbjct: 250 HAHVITGLVEGGYYALGLEFVMAYAGKDLRLDSESFGFLAGKLVKRKRYEEAMIVVKEMV 309
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 108/280 (38%), Gaps = 45/280 (16%)
Query: 11 TCTFNTLIHSHCSAGNLDEA---------LKVFENMKNFQVTADSASYS----------- 50
T F+ LI+ S+G+ + L F F+ ++ASYS
Sbjct: 39 TTEFDKLINEAGSSGDFETVRRLLNNRIVLGSFNTSDTFKFLTNTASYSSYLEDLRRVLP 98
Query: 51 -------------ILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQY 97
ILI LC+ G D A + ++ + G P ++Y PI
Sbjct: 99 QIDGGFSRKNAYDILISRLCKLGRIDDALIVIGDMSNG-----RLGLTP--STYHPILCS 151
Query: 98 LCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
L K +A RV+ + + + D +Y + HC +G E+ E++ + PD
Sbjct: 152 LTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPD 211
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
YD L+ G + K AM L +M + ST ++ L+E G+ +
Sbjct: 212 SRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITGLVEGGYYALGLEFVM 271
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKK 256
+++R L ++S L G + K +E ++ K+
Sbjct: 272 AYAGKDLR----LDSESFGFLAGKLVKRKRYEEAMIVVKE 307
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALK-VFENMKNFQVTADSASYSILIRNLCQR 59
MKG G F P+ ++N+L+++ +G +D+A+K ++E ++N +V D SY L+ C++
Sbjct: 269 MKGKG-FVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRV-VDFISYRTLVDESCRK 326
Query: 60 GDYDKAEKLFDELFEKEIV 78
G YD+A +L + L EK++V
Sbjct: 327 GKYDEATRLLEMLREKQLV 345
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D + T++ ++ ++D A ++ N + A+ + LI G+ ++AE LF
Sbjct: 934 DDIAWTTMVSAYRRVLDMDSA----NSLANQMSEKNEATSNCLINGYMGLGNLEQAESLF 989
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYMTV 128
+++ K+I+ S+ + + ++ + R+A V ++M+ G D ++ TV
Sbjct: 990 NQMPVKDII-----------SWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTV 1038
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
I G E G E+ ++ L+ F+ DV I L+D + + +LE+ L +
Sbjct: 1039 ISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSK-------CGSLERALLVFF 1091
Query: 189 -LPKTS--TWHSILARLLEKGFPHESARVTVMMLDRNIRQN 226
LPK + W+SI+ L GF E+ ++ M +++ N
Sbjct: 1092 NLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPN 1132
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
GF + ++I ++ G ++ A + F+ M D ++ LI + GD +
Sbjct: 208 AGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEM----TVKDIHIWTTLISGYAKLGDMEA 263
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPL 123
AEKLF E+ EK V S+ + G +A + R+++ G + +
Sbjct: 264 AEKLFCEMPEKNPV-----------SWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQF 312
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
++ + + + +G E+ +M+R + P+ + LID + K L A E + ++
Sbjct: 313 TFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMY-SKSGSLEASERVFRI 371
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN 226
+ W+++++ L + G H++ R+ M+ ++ N
Sbjct: 372 CDDKH--DCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPN 412
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 84/197 (42%), Gaps = 15/197 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ TF++ + + S +L ++ M V ++ S LI + G + +
Sbjct: 306 GVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEAS 365
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
E++F +K C F + ++A L +HG KA R+L ++K Q +
Sbjct: 366 ERVFRICDDKHD--CVFWNTMISA--------LAQHGLGHKALRMLDDMIKFRVQPNRTT 415
Query: 126 MTVIMGHC-REGAYENGYELLIWM-LRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+ VI+ C G E G M ++ +PD E Y CLID + M +E+M
Sbjct: 416 LVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEM 475
Query: 184 LKSSYLPKTSTWHSILA 200
+ P W++IL
Sbjct: 476 ---PFEPDKHIWNAILG 489
>AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=550
Length = 550
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALK-VFENMKNFQVTADSASYSILIRNLCQR 59
MKG G F P+ ++N+L+++ +G +D+A+K ++E ++N +V D SY L+ C++
Sbjct: 244 MKGKG-FVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRV-VDFISYRTLVDESCRK 301
Query: 60 GDYDKAEKLFDELFEKEIV 78
G YD+A +L + L EK++V
Sbjct: 302 GKYDEATRLLEMLREKQLV 320
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 104/249 (41%), Gaps = 17/249 (6%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
GGF D ++L+ + +G ++ A KVFE M V S++ +I Q D
Sbjct: 149 GGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVV----SWTAMISGFAQEWRVDI 204
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS 124
KL+ ++ K S P ++ + G + V Q + G + L
Sbjct: 205 CLKLYSKMR-------KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLH 257
Query: 125 YM-TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
++I +C+ G ++ + + +D + ++ +I G+ Q + A+E E M
Sbjct: 258 ISNSLISMYCKCGDLKDAFRIFDQFSNKDVVS----WNSMIAGYAQHGLAMQAIELFELM 313
Query: 184 L-KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
+ KS P T+ +L+ G E + +M + ++ +N + ++LL G
Sbjct: 314 MPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGL 373
Query: 243 RDKAFEIVE 251
+A E++E
Sbjct: 374 LQEALELIE 382
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 92/204 (45%), Gaps = 27/204 (13%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAG--NLDEALKVFENMKNFQVTADSASYSILIRNLCQRGD 61
D G +PD TF ++I + G L +++ + + F D+A L+ + GD
Sbjct: 310 DLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGF--VKDAAIVCALVNMYAKTGD 367
Query: 62 YDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG--T 119
+ A+K F++L +K+ + ++ + L HG +A + +++ ++G T
Sbjct: 368 AESAKKAFEDLEKKDTI-----------AWTVVIIGLASHGHGNEALSIFQRMQEKGNAT 416
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFL---PDVEIYDCLIDGFLQKDKPLLA 176
D ++Y+ V+ G E G M RD P VE Y C++D + +
Sbjct: 417 PDGITYLGVLYACSHIGLVEEGQRYFAEM--RDLHGLEPTVEHYGCMVDILSRAGR---- 470
Query: 177 METLEKMLKSSYL-PKTSTWHSIL 199
E E+++K+ + P + W ++L
Sbjct: 471 FEEAERLVKTMPVKPNVNIWGALL 494
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 134/319 (42%), Gaps = 40/319 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF D N+L+H + + G + A ++F M F+ D S++ ++ C+ G + A
Sbjct: 147 GFQNDVYVENSLVHMYANCGFIAAAGRIFGQM-GFR---DVVSWTSMVAGYCKCGMVENA 202
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
++FDE+ + + ++ + ++ KA + + + G +
Sbjct: 203 REMFDEMPHRNLF-----------TWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETV 251
Query: 126 MTVIMGHCRE-GAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
M ++ C GA E G ++++ ++ + L+D F + A+ E +
Sbjct: 252 MVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP 311
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHE-----SARVTVMMLDRNIRQNINLSTKSIELLFG 239
++ L +W SI+ L G H+ S +++ + R++ LS S
Sbjct: 312 ETDSL----SWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACS------ 361
Query: 240 HGH-RDKAFEIVELLYK-KGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDI 294
HG +K EI E + K G ++E +V L + GKL EA F LK H +
Sbjct: 362 HGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAEN---FILKMHVKPNA 418
Query: 295 DLCNAVILGLCEINRVLEA 313
+ A +LG C+I + E
Sbjct: 419 PILGA-LLGACKIYKNTEV 436
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/345 (19%), Positives = 137/345 (39%), Gaps = 22/345 (6%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+P+ FN LI + +A + M ++ D+ ++ LI+ +
Sbjct: 79 NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIK-----ASSEMECV 133
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMT 127
L E +IV +FG Q + G A R+ Q+ G +D +S+ +
Sbjct: 134 LVGEQTHSQIV--RFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQM---GFRDVVSWTS 188
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G+C+ G EN E+ M R+ + +I+G+ + + A++ E M +
Sbjct: 189 MVAGYCKCGMVENAREMFDEMPHRNLFT----WSIMINGYAKNNCFEKAIDLFEFMKREG 244
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
+ + S+++ G R ++ ++ N+ L T +++ + G +KA
Sbjct: 245 VVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAI 304
Query: 248 EIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLL--LFSLKNHHNVDIDLCNAVILGLC 305
+ E L + + +++ L G +A + SL + D+ +L C
Sbjct: 305 HVFEGLPETD-SLSWSSIIKGLAVHGHAHKAMHYFSQMISLG---FIPRDVTFTAVLSAC 360
Query: 306 EINRVLEAFGLCYELVEK--GLHQELTCLNDLVTALEARGKVEEA 348
++E YE ++K G+ L +V L GK+ EA
Sbjct: 361 SHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEA 405
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/338 (18%), Positives = 133/338 (39%), Gaps = 14/338 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P+ F ++ C G + EA +V M ++ +S+L+ + G+ KA
Sbjct: 207 GFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKA 266
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
LF+++ + G P +Y + + + G +A VL ++ G D +
Sbjct: 267 VDLFNKMIQ-------IGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVL 319
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+I + R G +E ++ + +R +PD + ++ K L +
Sbjct: 320 CNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIG 379
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
L + + +++ G+ + +V +M ++ + T + L G
Sbjct: 380 TDFDLVTGNLLSNCFSKI---GYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPR 436
Query: 245 KAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
A ++ +++ K+ + ++ L + GK A L + + +D+ I
Sbjct: 437 AAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAI 496
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
GL R+ EA+ LC ++ E G++ +++ L
Sbjct: 497 KGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGL 534
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D+ NT++H + + G L EA ++F M F V A ++ +I + G D+A
Sbjct: 156 GLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVA----WNSMIMGFAKCGLIDQA 211
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
+ LFDE+ ++ V S+ + +G+ + A + R++ ++ +
Sbjct: 212 QNLFDEMPQRNGV-----------SWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFT 260
Query: 126 MTVIMGHCRE-GAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
M ++ C GA E G + +++R F + + LID + + +E +
Sbjct: 261 MVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCG----CIEEGLNVF 316
Query: 185 KSSYLPKTSTWHSILARLLEKGF 207
+ + + S W+S++ L GF
Sbjct: 317 ECAPKKQLSCWNSMILGLANNGF 339
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 95/202 (47%), Gaps = 30/202 (14%)
Query: 25 GNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGS 84
G +D+A K++E + + D+ + + +I LC+ G D+A ++FDE+ E+ ++
Sbjct: 155 GRIDDACKLYEMIPD----KDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVI------ 204
Query: 85 QPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGHCREGAYENGYEL 144
++ + ++ + A ++ +M T+ +S+ +++MG+ + G E+ EL
Sbjct: 205 -----TWTTMVTGYGQNNRVDDARKIF-DVMPEKTE--VSWTSMLMGYVQNGRIEDAEEL 256
Query: 145 LIWMLRRDFLPDVEIYDC--LIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARL 202
+ +P + C +I G QK + A + M + + ++W +++
Sbjct: 257 F------EVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERN----DASWQTVIKIH 306
Query: 203 LEKGFPHESARVTVMMLDRNIR 224
GF E+ + ++M + +R
Sbjct: 307 ERNGFELEALDLFILMQKQGVR 328
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 14/160 (8%)
Query: 12 CTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDE 71
C +++ EA+KV+E + A +Y+I I C+ Y+KAE LFDE
Sbjct: 354 CILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDE 413
Query: 72 LFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRK---AERVLRQIMKRGTQDPLS-YMT 127
+ +K C +Y I +GKTR+ A R++ ++ +RG + + Y +
Sbjct: 414 MVKKGFDKC-------VVAYSNIMDM---YGKTRRLSDAVRLMAKMKQRGCKPNIWIYNS 463
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGF 167
+I H R ++ M R LPD Y +I +
Sbjct: 464 LIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAY 503
>AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:20791259-20792314 FORWARD
LENGTH=351
Length = 351
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 8/141 (5%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G F TC F+ ++++ ++EA +V E M++ + D SY+ + + C GD +
Sbjct: 154 GEFGLSTCVFHPILNTLTKKNRIEEAWRVVELMRSHAIPVDVTSYNYFLTSHCYDGDVAE 213
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS 124
A ++ ++ E+E + P +Y + C+ G+ A +LR++ + G LS
Sbjct: 214 ASRVLRKMEEEEEGVM----SPDTRTYDALVLGACKSGRVEAAMAILRRMEEEG----LS 265
Query: 125 YMTVIMGHCREGAYENGYELL 145
+ H E+GY L
Sbjct: 266 VLYATHAHVIGEMVESGYYAL 286
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 144/354 (40%), Gaps = 29/354 (8%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
DT ++N++I + +G+L EA+K+F+ M + AD +Y +LI + D + L
Sbjct: 372 DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLH 431
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVI 129
+ I + L+ S I Y K + L+ GT D +++ TVI
Sbjct: 432 SNGIKSGICI------DLSVSNALIDMY----AKCGEVGDSLKIFSSMGTGDTVTWNTVI 481
Query: 130 MGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
R G + G ++ M + + +PD+ + + L E +L+ Y
Sbjct: 482 SACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYE 541
Query: 190 PKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEI 249
+ ++++ + G S+RV +R R+++ T I +G +KA E
Sbjct: 542 SELQIGNALIEMYSKCGCLENSSRV----FERMSRRDVVTWTGMIYAYGMYGEGEKALET 597
Query: 250 VELLYKKGFCVKIEEVVQFL-----CKRGKLPEARKLLLFSLKNHHNVD--IDLCNAVIL 302
+ K G + + V F+ C L + +K H+ +D I+ V+
Sbjct: 598 FADMEKSGI---VPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVD 654
Query: 303 GLCEINRVLEAFGLCYELVEK-GLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
L ++ +A E ++ + + + ++ A G +E A +S+RI
Sbjct: 655 LLSRSQKISKA----EEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRI 704
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/284 (18%), Positives = 112/284 (39%), Gaps = 17/284 (5%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D T+NT+I +C G +DEA K+FE MK+ V D ++ + G+ ++
Sbjct: 176 DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIY 235
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVI 129
+ L E ++ + L Y G A R K ++ ++
Sbjct: 236 EFLIENDVRMDTHLLTALVTMYAGA-------GCMDMAREFFR---KMSVRNLFVSTAMV 285
Query: 130 MGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
G+ + G ++ + ++D + + +I +++ D P A+ E+M S
Sbjct: 286 SGYSKCGRLDDAQVIFDQTEKKDLV----CWTTMISAYVESDYPQEALRVFEEMCCSGIK 341
Query: 190 PKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEI 249
P + S+++ G ++ V + + ++++ I + G D ++
Sbjct: 342 PDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDV 401
Query: 250 VELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVD 293
E + ++ V ++ L G+ +A L LF+ NV+
Sbjct: 402 FEKMPRRNV-VSWSSMINALSMHGEASDA--LSLFARMKQENVE 442
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 8/176 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P +N ++ + A A+++F+ M + SY L+ L ++G
Sbjct: 451 DKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSAL-EKG--- 506
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
KL+DE F + K G +P +Y + L K + +L+++ +G + +
Sbjct: 507 ---KLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSV 563
Query: 124 -SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME 178
++ VI G R G YE M + P+ Y+ LI+ KP LA E
Sbjct: 564 VTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYE 619
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/364 (18%), Positives = 158/364 (43%), Gaps = 47/364 (12%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
++ +I ++ G + +A +VF+ M T+ +A + +I+N C D KA +LF ++
Sbjct: 83 SWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKC---DLGKAYELFCDI 139
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGH 132
EK A SY + G+ +AE + + + +D ++ ++ G+
Sbjct: 140 PEKN-----------AVSYATMITGFVRAGRFDEAEFLYAETPVK-FRDSVASNVLLSGY 187
Query: 133 CREGAYENGYELLIWMLRRDFLPDVEIYDC--LIDGFLQKDKPLLAMETLEKMLKSSYLP 190
R G + + M + E+ C ++ G+ + + + A ++M + + +
Sbjct: 188 LRAGKWNEAVRVFQGMAVK------EVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVI- 240
Query: 191 KTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD-----K 245
TW +++ + GF + + + M ++ +++ ++ ++F RD +
Sbjct: 241 ---TWTAMIDGYFKAGFFEDGFGLFLRMRQEG---DVKVNSNTLAVMF-KACRDFVRYRE 293
Query: 246 AFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
+I L+ + + ++ K G + EA K + +KN +V N++I
Sbjct: 294 GSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEA-KAVFGVMKNKDSVS---WNSLIT 349
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLD 362
GL + ++ EA YEL EK +++ D++ +G++ + + +P +N+
Sbjct: 350 GLVQRKQISEA----YELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT 405
Query: 363 RSVL 366
+ +
Sbjct: 406 WTAM 409
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 114/276 (41%), Gaps = 30/276 (10%)
Query: 15 NTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFE 74
N+L+ + G DEA +FE M D S++ L+ G +A+ +F E+ E
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMP----AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKE 379
Query: 75 KEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYM--TVIMGH 132
K I+ S+ + L E+G + ++ MKR +P Y I
Sbjct: 380 KNIL-----------SWMIMISGLAENGFGEEGLKLF-SCMKREGFEPCDYAFSGAIKSC 427
Query: 133 CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKT 192
GAY NG + +L+ F + + LI + + +E ++ ++ +
Sbjct: 428 AVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCG----VVEEARQVFRTMPCLDS 483
Query: 193 STWHSILARLLEKGFPHESARVTVMMLDRNIRQN-----INLSTKSIELLFGHGHRDKAF 247
+W++++A L + G E+ V ML + IR + L+ S L G K F
Sbjct: 484 VSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGR--KYF 541
Query: 248 EIVELLYK-KGFCVKIEEVVQFLCKRGKLPEARKLL 282
+ +E +Y+ ++ LC+ GK +A ++
Sbjct: 542 DSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVI 577
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 77/176 (43%), Gaps = 19/176 (10%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ + L+++ G DEA+ E+M++ + +A Y L R LC G ++ +
Sbjct: 660 PNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNM 719
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTV 128
+ +C+ ++PL +Y + Q + G + A + Q+ K + + ++ +
Sbjct: 720 LKK-------ICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVCSPNLVTCNIM 772
Query: 129 IMGHCREGAYENGYELLIWMLR--------RDF----LPDVEIYDCLIDGFLQKDK 172
+ + + G +E EL M DF LPD ++ ++D +++K
Sbjct: 773 LKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEK 828
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/349 (18%), Positives = 137/349 (39%), Gaps = 13/349 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SP+ T N + C AG +DEAL+++ + + SY+ LI LC ++A
Sbjct: 387 GVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQA 446
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+ ++ G ++ + LC GK A ++ +R ++
Sbjct: 447 YDVLKGAIDR-------GHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIA 499
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+I C G E+ + + +++ LI G + + +A + + +M
Sbjct: 500 GCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQ 559
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN-INLSTKSIELLFGHGHR 243
+ Y P S + +++ + E ++ T++ ++ ++ + IE G
Sbjct: 560 EKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKP 619
Query: 244 DKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
A + +++ + G + ++Q K K+ +A L+ L +
Sbjct: 620 KLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALH-FFHDLREQGKTKKRLYQVM 678
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
I+GLC+ N++ +A E+ +GL + C + L K +EA
Sbjct: 679 IVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAV 727
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 143/355 (40%), Gaps = 35/355 (9%)
Query: 15 NTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFE 74
+ L+ + AG D AL+ F NM+ + DS Y +L+ L + +D + +FD++
Sbjct: 186 DALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISV 245
Query: 75 KEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIM-GHC 133
+ V A ++ + + C+ GK +AE LR ++ S + +++ C
Sbjct: 246 RGFV--------CAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALC 297
Query: 134 REGAYENGYEL-----LIWMLRRDFLPDVEIYDCLIDG-------FLQKDKPLLAMETLE 181
+ ++ +L L+ + D ++ I + G FLQK PL E
Sbjct: 298 SKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCEL-- 355
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
+ ++S++ +LL++ + M+ R + N ++ G
Sbjct: 356 ---------EVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAG 406
Query: 242 HRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
D+A E+ + GF + ++ LC + +A +L ++ H + +
Sbjct: 407 FVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFS 466
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISK 353
+ LC + A L E+ L + +++AL GKVE+A I++
Sbjct: 467 TLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINE 521
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 136/328 (41%), Gaps = 16/328 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D T++T+I ++A++ FE M + D +YS ++ + G K
Sbjct: 216 GVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG---KV 272
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--L 123
E++ L+E+ + G +P A ++ + + E G VL++ MK P +
Sbjct: 273 EEVLS-LYERAVAT---GWKPDAIAFSVLGKMFGEAGDYDGIRYVLQE-MKSMDVKPNVV 327
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
Y T++ R G L ML P+ + L+ + + A++ E+M
Sbjct: 328 VYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEM 387
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ ++++L + G E+ R+ M + + N S ++ ++G G +
Sbjct: 388 KAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGK 447
Query: 244 -DKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNA 299
+KA E+ E + K G V + +VQ L K ++ + + S+K D LC
Sbjct: 448 AEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGC 507
Query: 300 V--ILGLCEINRVLEAFGLCYELVEKGL 325
+ ++ LCE + E C E K L
Sbjct: 508 LLSVMALCESSEDAEKVMACLERANKKL 535
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 8/157 (5%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+PD F+ LI A LDEA + ++ K+ + + SYS L+ C D+ KA +
Sbjct: 676 TPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALE 735
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
L++++ K I L +P ++ + LCE + KA L +I G + + ++Y
Sbjct: 736 LYEKI--KSIKL-----RPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYS 788
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCL 163
+++ R+ +E ++LL P++ + C+
Sbjct: 789 MLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCI 825