Miyakogusa Predicted Gene
- Lj0g3v0347779.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0347779.1 CUFF.23881.1
(118 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G31530.1 | Symbols: | NAD(P)-binding Rossmann-fold superfami... 202 3e-53
AT4G31530.2 | Symbols: | NAD(P)-binding Rossmann-fold superfami... 192 3e-50
AT4G18810.2 | Symbols: | NAD(P)-binding Rossmann-fold superfami... 62 9e-11
AT4G18810.1 | Symbols: | NAD(P)-binding Rossmann-fold superfami... 62 1e-10
AT2G37660.1 | Symbols: | NAD(P)-binding Rossmann-fold superfami... 55 7e-09
AT1G16720.1 | Symbols: HCF173 | high chlorophyll fluorescence ph... 53 4e-08
AT5G02240.1 | Symbols: | NAD(P)-binding Rossmann-fold superfami... 53 4e-08
>AT4G31530.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr4:15282281-15284064 FORWARD LENGTH=324
Length = 324
Score = 202 bits (514), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 90/116 (77%), Positives = 109/116 (93%)
Query: 1 MNLFGVLKYKKMGEDFLQNSGIPFTIIRPGRLTDGPYTSYDLNTLLKATAGQRRAVLIGQ 60
MNLFGVLKYKKMGEDFL++SG+PFTIIRPGRLTDGPYTSYDLNTLLKATAG+RRAV+IGQ
Sbjct: 207 MNLFGVLKYKKMGEDFLRDSGLPFTIIRPGRLTDGPYTSYDLNTLLKATAGERRAVVIGQ 266
Query: 61 GDKLVGEASRIVVAEACIQALDLQVTENQVYEVSSVEGEGPGNEAQKWEELFQAAQ 116
GD LVGE SR+VVAEACIQALD++ T+ + YE++SV+G+GPG++ Q+W ELF+AA+
Sbjct: 267 GDNLVGEVSRLVVAEACIQALDIEFTQGKAYEINSVKGDGPGSDPQQWRELFKAAE 322
>AT4G31530.2 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr4:15282281-15284064 FORWARD LENGTH=338
Length = 338
Score = 192 bits (489), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 90/130 (69%), Positives = 109/130 (83%), Gaps = 14/130 (10%)
Query: 1 MNLFGVLKYKKMGEDFLQNSGIPFTIIRPGRLTDGPYTSYDLNTLLKATAGQRRAVLIGQ 60
MNLFGVLKYKKMGEDFL++SG+PFTIIRPGRLTDGPYTSYDLNTLLKATAG+RRAV+IGQ
Sbjct: 207 MNLFGVLKYKKMGEDFLRDSGLPFTIIRPGRLTDGPYTSYDLNTLLKATAGERRAVVIGQ 266
Query: 61 GDKLVGEASRIVVAEACIQALDLQVTENQVYEVSSVE--------------GEGPGNEAQ 106
GD LVGE SR+VVAEACIQALD++ T+ + YE++SV+ G+GPG++ Q
Sbjct: 267 GDNLVGEVSRLVVAEACIQALDIEFTQGKAYEINSVKVPQTVSLKFEQSGNGDGPGSDPQ 326
Query: 107 KWEELFQAAQ 116
+W ELF+AA+
Sbjct: 327 QWRELFKAAE 336
>AT4G18810.2 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr4:10322263-10325735 REVERSE LENGTH=627
Length = 627
Score = 61.6 bits (148), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 25/121 (20%)
Query: 6 VLKYKKMGEDFLQNSGIPFTIIRPGRLTDGPYTSYDLNTLLKATAGQRRAVLIGQGDKLV 65
+L YK GED +++SGIPF I+RP LT+ P AG ++ QGD +
Sbjct: 477 ILTYKLKGEDLIRDSGIPFAIVRPCALTEEP-------------AGA--DLIFEQGDNIT 521
Query: 66 GEASRIVVAEACIQALDLQVTENQVYEVSS---------VEGEGPGNEAQKWEELFQAAQ 116
G+ SR VA CI AL+ N+ +EV S V+ E P E + + E F+ +
Sbjct: 522 GKVSRDEVARICIAALESPYALNKTFEVKSTVPFSEPFTVDPENPPPE-KDYNEYFKTLK 580
Query: 117 D 117
D
Sbjct: 581 D 581
>AT4G18810.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr4:10322622-10325735 REVERSE LENGTH=596
Length = 596
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 25/121 (20%)
Query: 6 VLKYKKMGEDFLQNSGIPFTIIRPGRLTDGPYTSYDLNTLLKATAGQRRAVLIGQGDKLV 65
+L YK GED +++SGIPF I+RP LT+ P AG ++ QGD +
Sbjct: 477 ILTYKLKGEDLIRDSGIPFAIVRPCALTEEP-------------AGA--DLIFEQGDNIT 521
Query: 66 GEASRIVVAEACIQALDLQVTENQVYEVSS---------VEGEGPGNEAQKWEELFQAAQ 116
G+ SR VA CI AL+ N+ +EV S V+ E P E + + E F+ +
Sbjct: 522 GKVSRDEVARICIAALESPYALNKTFEVKSTVPFSEPFTVDPENPPPE-KDYNEYFKTLK 580
Query: 117 D 117
D
Sbjct: 581 D 581
>AT2G37660.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr2:15795481-15796977 REVERSE LENGTH=325
Length = 325
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 19/111 (17%)
Query: 6 VLKYKKMGEDFLQNSGIPFTIIRPGRLTDGPYTSYDLNTLLKATAGQRRAVLIGQGDKLV 65
+L +K+ E +L +SGIP+TIIR G L D G R +L+G+ D+L+
Sbjct: 223 ILVWKRKAEQYLADSGIPYTIIRAGGLQD--------------KDGGIRELLVGKDDELL 268
Query: 66 GEASRIV----VAEACIQALDLQVTENQVYEVSSVEGEGPGNEAQKWEELF 112
+R + VAE C+QAL L+ + + +++S + EG G + ++ LF
Sbjct: 269 ETETRTIARADVAEVCVQALQLEEAKFKALDLAS-KPEGTGTPTKDFKALF 318
>AT1G16720.1 | Symbols: HCF173 | high chlorophyll fluorescence
phenotype 173 | chr1:5723161-5726248 FORWARD LENGTH=598
Length = 598
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 14/88 (15%)
Query: 6 VLKYKKMGEDFLQNSGIPFTIIRPGRLTDGPYTSYDLNTLLKATAGQRRAVLIGQGDKLV 65
VLK K+ GED L+ SG+ +TIIRPG L + P G +RA++ QG+++
Sbjct: 487 VLKAKRAGEDSLRRSGLGYTIIRPGPLKEEP--------------GGQRALIFDQGNRIS 532
Query: 66 GEASRIVVAEACIQALDLQVTENQVYEV 93
S VA+ C++AL N+ ++V
Sbjct: 533 QGISCADVADICVKALHDSTARNKSFDV 560
>AT5G02240.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr5:451502-452984 FORWARD LENGTH=253
Length = 253
Score = 52.8 bits (125), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 19/111 (17%)
Query: 6 VLKYKKMGEDFLQNSGIPFTIIRPGRLTDGPYTSYDLNTLLKATAGQRRAVLIGQGDKLV 65
+L +K+ E +L +SG P+TIIR G L D G R +L+G+ D+L+
Sbjct: 151 ILVWKRKAEQYLADSGTPYTIIRAGGLLD--------------KEGGVRELLVGKDDELL 196
Query: 66 GEASRIV----VAEACIQALDLQVTENQVYEVSSVEGEGPGNEAQKWEELF 112
++ V VAE CIQAL + +N+ +++ S + EG + ++ LF
Sbjct: 197 QTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGS-KPEGTSTPTKDFKALF 246