Miyakogusa Predicted Gene

Lj0g3v0346989.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0346989.2 Non Chatacterized Hit- tr|C6THR5|C6THR5_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2 S,68.25,7e-16,
,CUFF.23812.2
         (74 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G62810.1 | Symbols: PEX14, ATPEX14, PED2 | peroxin 14 | chr5:...    68   1e-12

>AT5G62810.1 | Symbols: PEX14, ATPEX14, PED2 | peroxin 14 |
           chr5:25220323-25223571 FORWARD LENGTH=507
          Length = 507

 Score = 67.8 bits (164), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 28/44 (63%), Positives = 38/44 (86%)

Query: 1   MAMVQRGEKPANIRDINDLPPNPSQEPSNPLLMPRSKPWEVGQV 44
           M+M+QRGEKP+NIR+IND+PPNP+Q  S+P + P+SKPW+ GQ 
Sbjct: 333 MSMIQRGEKPSNIREINDMPPNPNQPLSDPRIAPKSKPWDYGQA 376