Miyakogusa Predicted Gene

Lj0g3v0346119.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0346119.1 Non Chatacterized Hit- tr|E0VEP1|E0VEP1_PEDHC
Protein SET, putative OS=Pediculus humanus subsp.
corp,33.13,6e-18,SUBFAMILY NOT NAMED,NULL; TESTIS-SPECIFIC Y-ENCODED
PROTEIN,Nucleosome assembly protein (NAP);
NAP,N,NODE_56738_length_914_cov_41.086433.path2.1
         (187 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G74560.1 | Symbols: NRP1 | NAP1-related protein 1 | chr1:2801...   162   1e-40
AT1G74560.3 | Symbols: NRP1 | NAP1-related protein 1 | chr1:2801...   157   3e-39
AT1G74560.2 | Symbols: NRP1 | NAP1-related protein 1 | chr1:2801...   157   3e-39
AT1G18800.1 | Symbols: NRP2 | NAP1-related protein 2 | chr1:6481...   153   8e-38

>AT1G74560.1 | Symbols: NRP1 | NAP1-related protein 1 |
           chr1:28017815-28019900 REVERSE LENGTH=256
          Length = 256

 Score =  162 bits (410), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 90/198 (45%), Positives = 119/198 (60%), Gaps = 22/198 (11%)

Query: 1   MEKLEEMEDKINLIHMMA----FQVDD-YKERLKSAYQERSKIIDSIPGFWFTVVLLKHP 55
           +EKL+E++D +  I+  A     +V+  Y    K  Y +R+++I SIPGFW T   L HP
Sbjct: 31  IEKLQEIQDDLEKINEKASDEVLEVEQKYNVIRKPVYDKRNEVIQSIPGFWMTA-FLSHP 89

Query: 56  AYRQLFNQEDHKIFQYFTSLEVEDDMDVNSSYSITFNFKPNPYFENTKLQKTLTFLQEGT 115
           A   L  +ED KIF+Y  SLEVED  DV S YSITF+F  NP+FE+ KL KT TFL+EGT
Sbjct: 90  ALGDLLTEEDQKIFKYLNSLEVEDAKDVKSGYSITFHFTSNPFFEDAKLTKTFTFLEEGT 149

Query: 116 TKITATPIKWKQNNQVPADF---------------GFFSWFTMTEQKDDVH-HIHDEIAC 159
           TKITATPIKWK+   +P                   FF+WFT  + K+D    IHDE+A 
Sbjct: 150 TKITATPIKWKEGKGLPNGVNHDDKKGNKRALPEESFFTWFTDAQHKEDAGDEIHDEVAD 209

Query: 160 LFKDDVWKYALFYFKMES 177
           + K+D+W   L YF  ++
Sbjct: 210 IIKEDLWSNPLTYFNNDA 227


>AT1G74560.3 | Symbols: NRP1 | NAP1-related protein 1 |
           chr1:28017763-28019900 REVERSE LENGTH=264
          Length = 264

 Score =  157 bits (398), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 87/187 (46%), Positives = 114/187 (60%), Gaps = 22/187 (11%)

Query: 1   MEKLEEMEDKINLIHMMA----FQVDD-YKERLKSAYQERSKIIDSIPGFWFTVVLLKHP 55
           +EKL+E++D +  I+  A     +V+  Y    K  Y +R+++I SIPGFW T   L HP
Sbjct: 31  IEKLQEIQDDLEKINEKASDEVLEVEQKYNVIRKPVYDKRNEVIQSIPGFWMTA-FLSHP 89

Query: 56  AYRQLFNQEDHKIFQYFTSLEVEDDMDVNSSYSITFNFKPNPYFENTKLQKTLTFLQEGT 115
           A   L  +ED KIF+Y  SLEVED  DV S YSITF+F  NP+FE+ KL KT TFL+EGT
Sbjct: 90  ALGDLLTEEDQKIFKYLNSLEVEDAKDVKSGYSITFHFTSNPFFEDAKLTKTFTFLEEGT 149

Query: 116 TKITATPIKWKQNNQVPADF---------------GFFSWFTMTEQKDDVH-HIHDEIAC 159
           TKITATPIKWK+   +P                   FF+WFT  + K+D    IHDE+A 
Sbjct: 150 TKITATPIKWKEGKGLPNGVNHDDKKGNKRALPEESFFTWFTDAQHKEDAGDEIHDEVAD 209

Query: 160 LFKDDVW 166
           + K+D+W
Sbjct: 210 IIKEDLW 216


>AT1G74560.2 | Symbols: NRP1 | NAP1-related protein 1 |
           chr1:28017815-28019900 REVERSE LENGTH=257
          Length = 257

 Score =  157 bits (398), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 90/199 (45%), Positives = 119/199 (59%), Gaps = 23/199 (11%)

Query: 1   MEKLEEMEDKINLIHMMA----FQVDD-YKERLKSAYQERSKIIDSIPGFWFTVVLLKHP 55
           +EKL+E++D +  I+  A     +V+  Y    K  Y +R+++I SIPGFW T   L HP
Sbjct: 31  IEKLQEIQDDLEKINEKASDEVLEVEQKYNVIRKPVYDKRNEVIQSIPGFWMTA-FLSHP 89

Query: 56  AYRQLFNQEDHKIFQYFTSLEVEDDMDVNSSYSITFNFKPNPYFENTKLQKTLTFLQEGT 115
           A   L  +ED KIF+Y  SLEVED  DV S YSITF+F  NP+FE+ KL KT TFL+EGT
Sbjct: 90  ALGDLLTEEDQKIFKYLNSLEVEDAKDVKSGYSITFHFTSNPFFEDAKLTKTFTFLEEGT 149

Query: 116 TKITATPIKWKQNNQVPADF---------------GFFSWFTMTEQKDDVH-HIHDE-IA 158
           TKITATPIKWK+   +P                   FF+WFT  + K+D    IHDE +A
Sbjct: 150 TKITATPIKWKEGKGLPNGVNHDDKKGNKRALPEESFFTWFTDAQHKEDAGDEIHDEQVA 209

Query: 159 CLFKDDVWKYALFYFKMES 177
            + K+D+W   L YF  ++
Sbjct: 210 DIIKEDLWSNPLTYFNNDA 228


>AT1G18800.1 | Symbols: NRP2 | NAP1-related protein 2 |
           chr1:6481466-6483463 REVERSE LENGTH=256
          Length = 256

 Score =  153 bits (386), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 87/194 (44%), Positives = 120/194 (61%), Gaps = 22/194 (11%)

Query: 1   MEKLEEMEDKINLIHMMA----FQVDD-YKERLKSAYQERSKIIDSIPGFWFTVVLLKHP 55
           +EKL+E++D +  I+  A     +V+  Y    K  Y +R++II +IP FW T   L HP
Sbjct: 27  IEKLQEIQDDLEKINEKASDEVLEVEQKYNVIRKPVYDKRNEIIKTIPDFWLTA-FLSHP 85

Query: 56  AYRQLFNQEDHKIFQYFTSLEVEDDMDVNSSYSITFNFKPNPYFENTKLQKTLTFLQEGT 115
           A  +L  +ED KIF+Y +SL+VED  DV S YSITF+F PNP+FE+ KL KT TFL+EGT
Sbjct: 86  ALGELLTEEDQKIFKYLSSLDVEDAKDVKSGYSITFSFNPNPFFEDGKLTKTFTFLEEGT 145

Query: 116 TKITATPIKWKQ--------------NNQVPADFGFFSWFTMTEQKDDVH-HIHDE-IAC 159
           TKITATPIKWK+              N +   +  FF+WF+  + K+DV   + DE +A 
Sbjct: 146 TKITATPIKWKEGKGLANGVNHEKNGNKRALPEESFFTWFSDAQHKEDVEDEMQDEQVAD 205

Query: 160 LFKDDVWKYALFYF 173
           + K+D+W   L YF
Sbjct: 206 IIKEDLWPNPLTYF 219