Miyakogusa Predicted Gene

Lj0g3v0345919.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0345919.1 tr|Q93XN3|Q93XN3_GOSHI Salicylic acid-induced 1
protein (Fragment) OS=Gossypium hirsutum PE=2
SV=1,32.28,3e-17,seg,NULL; DUF588,Uncharacterised protein family
UPF0497, trans-membrane plant; OS08G0536200 PROTEIN,,CUFF.23728.1
         (186 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G54980.1 | Symbols:  | Uncharacterised protein family (UPF049...   153   8e-38
AT1G17200.1 | Symbols:  | Uncharacterised protein family (UPF049...    97   5e-21
AT1G17200.2 | Symbols:  | Uncharacterised protein family (UPF049...    84   8e-17
AT3G14380.1 | Symbols:  | Uncharacterised protein family (UPF049...    72   2e-13
AT4G16442.1 | Symbols:  | Uncharacterised protein family (UPF049...    61   4e-10
AT4G25830.1 | Symbols:  | Uncharacterised protein family (UPF049...    52   3e-07
AT2G35760.1 | Symbols:  | Uncharacterised protein family (UPF049...    50   6e-07
AT4G15630.1 | Symbols:  | Uncharacterised protein family (UPF049...    48   5e-06

>AT5G54980.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr5:22315799-22316560 FORWARD LENGTH=194
          Length = 194

 Score =  153 bits (386), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 82/160 (51%), Positives = 106/160 (66%), Gaps = 1/160 (0%)

Query: 16  PM-LKVFDSSLRLFAVPLSVATIWITVTNNQDNSIYGMLKYSNLLGLKYMVFXXXXXXXX 74
           PM LK+ DS LRL  VPLSVATIW+TVTN++ N  YG L+Y++++GLKYMV         
Sbjct: 26  PMSLKIIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNLEYNSIMGLKYMVGVSAISAIY 85

Query: 75  XXXXXXXXWVRYVVSKAWIFFISDQIVAYLLVTSVAASMEIHYLAYNGAKEDSWSEACSI 134
                   WV  +VSKAW+FFI DQ++AY++ TSVA + EI YL   G K  +WSE CS 
Sbjct: 86  ALLSTVSSWVTCLVSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCSS 145

Query: 135 YGRFCSKVKLAFILQMITFLCFIILAVISAFRAFSLFDPP 174
           Y  +CSK+ +A  L +     F+ L+VISA+RAFS FDPP
Sbjct: 146 YPHYCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFDPP 185


>AT1G17200.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr1:5878493-5879871 FORWARD LENGTH=204
          Length = 204

 Score = 97.4 bits (241), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 4/162 (2%)

Query: 18  LKVFDSSLRLFAVPLSVATIWITVTNNQDNSIYGMLKYSNLLGLKYMVFXXXXXXXXXXX 77
           ++  ++ LRL  V L VA + + + +++ N  +G + YSNL   +Y+V            
Sbjct: 30  IRTAETMLRLAPVGLCVAALVVMLKDSETNE-FGSISYSNLTAFRYLVHANGICAGYSLL 88

Query: 78  XXXXXWV---RYVVSKAWIFFISDQIVAYLLVTSVAASMEIHYLAYNGAKEDSWSEACSI 134
                 +      + + W FF  DQ++ YL++ + A S E+ YLAYNG    +WS+ACS 
Sbjct: 89  SAAIAAMPRSSSTMPRVWTFFCLDQLLTYLVLAAGAVSAEVLYLAYNGDSAITWSDACSS 148

Query: 135 YGRFCSKVKLAFILQMITFLCFIILAVISAFRAFSLFDPPSV 176
           YG FC +   + I+       +I+L++IS+++ F+ FDPPS+
Sbjct: 149 YGGFCHRATASVIITFFVVCFYIVLSLISSYKLFTRFDPPSI 190


>AT1G17200.2 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr1:5878668-5879871 FORWARD LENGTH=135
          Length = 135

 Score = 83.6 bits (205), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 57/87 (65%)

Query: 90  KAWIFFISDQIVAYLLVTSVAASMEIHYLAYNGAKEDSWSEACSIYGRFCSKVKLAFILQ 149
           + W FF  DQ++ YL++ + A S E+ YLAYNG    +WS+ACS YG FC +   + I+ 
Sbjct: 35  RVWTFFCLDQLLTYLVLAAGAVSAEVLYLAYNGDSAITWSDACSSYGGFCHRATASVIIT 94

Query: 150 MITFLCFIILAVISAFRAFSLFDPPSV 176
                 +I+L++IS+++ F+ FDPPS+
Sbjct: 95  FFVVCFYIVLSLISSYKLFTRFDPPSI 121


>AT3G14380.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr3:4803175-4803799 REVERSE LENGTH=178
          Length = 178

 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 87/176 (49%), Gaps = 6/176 (3%)

Query: 2   RTHIHDSPSVKNHLPMLKVFDSSLRLFAVPLSVATIWITVTNNQDNSIYGMLKYSNLLGL 61
           +T I +S  V N     K  ++ LR+ ++ LS+  + I + N+  N  +G + YSN+   
Sbjct: 6   QTAIDESALVLNRTE--KSAEAVLRVASMALSITGLVIMIKNSISNE-FGSVSYSNIGAF 62

Query: 62  KYMVFXXXXXXXXXXXXXXXXWVRYV-VSKAWI--FFISDQIVAYLLVTSVAASMEIHYL 118
            Y+V                       +SK  +   F+ DQ+V Y+++ + A S E  YL
Sbjct: 63  MYLVSANGVCAAYSLLSALAILALPCPISKVQVRTLFLLDQVVTYVVLAAGAVSAETVYL 122

Query: 119 AYNGAKEDSWSEACSIYGRFCSKVKLAFILQMITFLCFIILAVISAFRAFSLFDPP 174
           AY G    +WS AC  YG FC    ++ +   +  L +++L++IS++R F+ F+ P
Sbjct: 123 AYYGNIPITWSSACDSYGSFCHNALISVVFTFVVSLLYMLLSLISSYRLFTRFEAP 178


>AT4G16442.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr4:9272042-9272970 REVERSE LENGTH=182
          Length = 182

 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 48/83 (57%)

Query: 91  AWIFFISDQIVAYLLVTSVAASMEIHYLAYNGAKEDSWSEACSIYGRFCSKVKLAFILQM 150
           AW FF  DQ +AYL V ++AA+ E   +A  G ++  W   C++YG+FC+++ +     +
Sbjct: 91  AWAFFSGDQAMAYLNVAAIAATAESGVIAREGEEDLQWMRVCTMYGKFCNQMAIGVSSAL 150

Query: 151 ITFLCFIILAVISAFRAFSLFDP 173
           +  +  + ++ ISAF  F L+  
Sbjct: 151 LASIAMVFVSCISAFSLFRLYGA 173


>AT4G25830.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr4:13133727-13134790 FORWARD LENGTH=175
          Length = 175

 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%)

Query: 92  WIFFISDQIVAYLLVTSVAASMEIHYLAYNGAKEDSWSEACSIYGRFCSKVKLAFILQMI 151
           W  ++ DQ  AY++    +A+ +   L   G++E  W + C  + RFC ++  A IL  I
Sbjct: 84  WFSYLLDQTAAYVVFAGTSAAAQHSLLVVTGSRELQWMKWCYKFTRFCFQMGSAIILNYI 143

Query: 152 TFLCFIILAVISAFRAFSLFDPP 174
                ++L+ ISAF  F L+ P 
Sbjct: 144 AAALMVLLSSISAFNLFRLYSPK 166


>AT2G35760.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr2:15032059-15033094 FORWARD LENGTH=201
          Length = 201

 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 44/82 (53%)

Query: 91  AWIFFISDQIVAYLLVTSVAASMEIHYLAYNGAKEDSWSEACSIYGRFCSKVKLAFILQM 150
           AW  F  DQ VAYL V  VAA+ +    A  G  E  W + C++YG+FC++V       +
Sbjct: 110 AWAIFFGDQAVAYLCVAGVAAAAQSAAFAKLGEPELQWMKICNMYGKFCNQVGEGIASAL 169

Query: 151 ITFLCFIILAVISAFRAFSLFD 172
              +  ++++ ISAF  F L+ 
Sbjct: 170 FACIGMVLISCISAFGVFRLYG 191


>AT4G15630.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr4:8917527-8918683 FORWARD LENGTH=190
          Length = 190

 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 19/72 (26%), Positives = 40/72 (55%)

Query: 95  FISDQIVAYLLVTSVAASMEIHYLAYNGAKEDSWSEACSIYGRFCSKVKLAFILQMITFL 154
            I D ++  LL +S  A+  I  +  +G K   W + C ++G+FC++  ++  + +I  +
Sbjct: 117 LIGDLMMVALLFSSTGAAGAIGLMGRHGNKHVMWKKVCGVFGKFCNQAAVSVAITLIASV 176

Query: 155 CFIILAVISAFR 166
            F++L V+ A +
Sbjct: 177 VFMLLVVLDALK 188