Miyakogusa Predicted Gene

Lj0g3v0345809.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0345809.1 Non Chatacterized Hit- tr|K4CIF8|K4CIF8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,86.54,4e-19,ENHANCER OF RUDIMENTARY ERH,Enhancer of
rudimentary; ERH_ARATH_Q96319;,Enhancer of rudimentary;
ER,E,NODE_381_length_371_cov_449.315369.path2.1
         (81 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G10810.1 | Symbols: ATER, ER | enhancer of rudimentary protei...   139   5e-34

>AT5G10810.1 | Symbols: ATER, ER | enhancer of rudimentary protein,
           putative | chr5:3418897-3420556 REVERSE LENGTH=109
          Length = 109

 Score =  139 bits (349), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 62/81 (76%), Positives = 75/81 (92%)

Query: 1   MDYASITQAMEGICGLYERKLKELNPAIRSLSYDISDLYNFIDGLADMSALVYDTSIHAY 60
           MDY SI QAM+GICGLYERKLKE+NP++R++SYDI+DLYNFIDGLAD+SALVYD SI AY
Sbjct: 26  MDYDSIGQAMDGICGLYERKLKEINPSLRNISYDIADLYNFIDGLADLSALVYDHSISAY 85

Query: 61  LPHDRQWIKQRTFQHLKKLAH 81
           LP+DRQWIKQ+ F HLK++A+
Sbjct: 86  LPYDRQWIKQKAFHHLKRIAN 106